Prupe.8G257400_v2.0.a1

May be involved in modulation of pathogen defense and leaf cell death

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0013845
Physical Location & Seq
Reverse (-)
21914479 .. 21916328
1850 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G257400.1

Sequence Viewer

Length: 1521 bp
ATGAGTGGTGGTGAAACCGAAGGGGAGACGTTAGAGTACACGCCGACATGGATTGTGGCAGCAGTGTGCACTGTGATCGTCGCCATTTCTCTGGCAGTCGAGCGCCTCCTCCACTACGGAGGCAAGTACTTGAAGAAGAAGAACCAGAAGCCTCTCTTCGAAGCCTTGCAGAAAATTAAAGAGGAGCTTATGCTGTTGGGCTTCATCTCTCTGCTCCTCACTGTCTTCCAAAACGTCATCTCCAAAATCTGCGTCGCCCACCAAGTAATGGAGCATCTGCTGCCATGCAAACTCCCCAGTGAGGAAGAAGCAGCAAAACCCACTTCCCATTTCGGAAGGAGGAAGCTTTTCGCCGAGGAATCGTTTGAGATGCAGATCGGTTACTGTGCCAAAAAGCATAAGGTACCGTTGTTATCTGTTGAAGCTTTGCATCATCTGCATATCTTTATCTTCGTCCTAGCCATTGTCCATGTGACCTTCTGTGTTCTCACTGTTGTCTTCGGAGGGATTAAAATTCGTCAATGGAAATCTTGGGAGGATTCGATCGCAAAGGAAAATTATGATTCAGAACAAGTTCTCAAGAAGAAGAAAAAGGTTACCCATGTCAACCAACACGCTTTTATCAAAGCCCATTTTCTGGGTATGGGTAAAAATTCAGCCTTTCTGGGTTGGGTAGATTCTTTTGTGAAACAATTTTATGCATCTGTGACGAAATCAGATTATGTGACTTTGCGACTGGGTTTCATCACAACCCATTGCAGGGGAAACCCCAAATTTGATTTTCACAAATACATGATTAGAGCCCTTGAAGATGATTTTAAGAAAGTGGTTGGTATAAGTTGGTATCTCTGGGTATTTGTGGTCATCTTCTTGCTGATGAATATTAATGGCTGGCATACATATTTCTGGATAGCTTTTGCTCCCTTCGTTCTTCTGCTTGCTGTGGGAACTAAGCTGGAGCATATAATTACCCAATTGGCACATGAGGTTGCTGAGAAACATGTAGCCATAGAAGGGGATCTCGTGGTTCAGCCATCAGATGACCACTTTTGGTTCGGCAAACCCAAAATTGTCCTCTTCTTGATCCATTTCATCCTCTTCCAAAATGCTTTCGAAATCGCCTTCTTTTTCTGGATTTGGCTGCAGTATGGTTTCGACTCGTGCATAATGGGACAAGTGCGTTACATTGTCCCTAGGCTTATTATTGGGGTGTTCATTCAGGTGCTCTGTAGTTACAGCACCCTGCCACTCTACGCCATTGTGGCACAGATGGGGACTAATTTCAAGGCGGCAATATTTAATGAGCATGTTCAAGTAGGGCTTGTTGGTTGGGCTCAGAAGGTTAAGAAGAAGAAGGCGCTGGAAGCTGCCAACGATGCCTCTGGCTCTGGCTCTGGCTCTGGACAAGGCCAAGCAAGTTCCCATGGTGGTGGTCTTGCTTCTAATATGGGAATTCAGCTGGGAAAATTTATCAAGCCAACTAAGCAGGAGGAAACTAAGCAGGATGAGGAGACTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mlo

Protein Analysis

507

Amino Acids

57.33

Weight (kDa)

8.98

Isoelectric Point (pI)

26.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013845)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02600 AT4G02600
fragaria_vesca FvH4_2g25260
malus_domestica MD03G1282200.v1.1
prunus_persica Prupe.8G257400_v2.0.a1
pyrus_communis pycom03g22300
rosa_chinensis RchiOBHm_Chr6g0293391
rosa_laevigata RLG00000011950
rosa_multiflora Rmu_co8483215.1_g000001 Rmu_sc0006269.1_g000024
rosa_roxburghii Rroxscaffold_7G00174190
rosa_rugosa Rorug06G0235200
rosa_samantha Rh6AG348100 Rh6BG355700 Rh6CG361800 Rh6DG348900
rosa_wichuraiana Rw6G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 403
AccB1I GGYRCC 1 cut(s) 403
AccB7I CCANNNNNTGG 2 cut(s) 268, 637
AciI CCGC 1 cut(s) 1289
AclWI GGATC 2 cut(s) 1026, 1078
AcsI RAATTY 5 cut(s) 513, 652, 773, 1452, 1466
AfaI GTAC 3 cut(s) 38, 128, 405
AfiI CCNNNNNNNGG 6 cut(s) 268, 301, 637, 759, 760, 1014
AflIII ACRYGT 1 cut(s) 1000
AgsI TTSAA 5 cut(s) 133, 422, 809, 1285, 1313
AluBI AGCT 7 cut(s) 187, 346, 425, 914, 955, 1367, 1459
AluI AGCT 7 cut(s) 187, 346, 425, 914, 955, 1367, 1459
Alw21I GWGCWC 2 cut(s) 71, 1227
Alw26I GTCTC 2 cut(s) 20, 1505
Alw44I GTGCAC 1 cut(s) 67
AlwI GGATC 2 cut(s) 1026, 1078
AoxI GGCC 1 cut(s) 1408
ApaLI GTGCAC 1 cut(s) 67
ApeKI GCWGC 5 cut(s) 59, 280, 311, 1141, 1367
ApoI RAATTY 5 cut(s) 513, 652, 773, 1452, 1466
ArsI GACNNNNNNTTYG 2 cut(s) 237, 269
AseI ATTAAT 1 cut(s) 885
Asp700I GAANNNNTTC 2 cut(s) 347, 573
Asp718I GGTACC 1 cut(s) 403
AspA2I CCTAGG 1 cut(s) 1193
AspLEI GCGC 2 cut(s) 105, 1360
AsuHPI GGTGA 1 cut(s) 23
AsuII TTCGAA 2 cut(s) 159, 1113
AvrII CCTAGG 1 cut(s) 1193
BaeGI GKGCMC 1 cut(s) 71
BaeI ACNNNNGTAYC 2 cut(s) 395, 428
BanI GGYRCC 1 cut(s) 403
BanII GRGCYC 2 cut(s) 805, 1336
BauI CACGAG 2 cut(s) 1022, 1159
BbsI GAAGAC 2 cut(s) 217, 490
Bbv12I GWGCWC 2 cut(s) 71, 1227
BbvI GCAGC 5 cut(s) 71, 267, 323, 1128, 1354
BccI CCATC 2 cut(s) 1042, 1264
BcgI CGANNNNNNTGC 2 cut(s) 58, 92
BcoDI GTCTC 2 cut(s) 20, 1505
BfaI CTAG 2 cut(s) 458, 1194
BfmI CTRYAG 2 cut(s) 1142, 1228
BfoI RGCGCY 2 cut(s) 106, 1361
BglI GCCNNNNNGGC 1 cut(s) 1262
BisI GCNGC 6 cut(s) 60, 281, 312, 1142, 1290, 1368
BlnI CCTAGG 1 cut(s) 1193
BlsI GCNGC 6 cut(s) 61, 282, 313, 1143, 1291, 1369
BmcAI AGTACT 1 cut(s) 128
BmiI GGNNCC 1 cut(s) 405
BmrI ACTGGG 2 cut(s) 291, 746
BmsI GCATC 5 cut(s) 283, 360, 439, 710, 1366
BmuI ACTGGG 2 cut(s) 291, 746
BpiI GAAGAC 2 cut(s) 217, 490
BpmI CTGGAG 1 cut(s) 977
Bpu14I TTCGAA 2 cut(s) 159, 1113
BpuEI CTTGAG 1 cut(s) 563
BsaBI GATNNNNATC 1 cut(s) 374
BsaJI CCNNGG 3 cut(s) 354, 1193, 1423
BsaXI ACNNNNNCTCC 3 cut(s) 224, 254, 1502
Bsc4I CCNNNNNNNGG 6 cut(s) 268, 301, 637, 759, 760, 1014
Bse1I ACTGG 2 cut(s) 297, 741
Bse3DI GCAATG 1 cut(s) 754
Bse8I GATNNNNATC 1 cut(s) 374
BseDI CCNNGG 3 cut(s) 354, 1193, 1423
BseGI GGATG 2 cut(s) 1092, 1510
BseJI GATNNNNATC 1 cut(s) 374
BseLI CCNNNNNNNGG 6 cut(s) 268, 301, 637, 759, 760, 1014
BseMI GCAATG 1 cut(s) 754
BseMII CTCAG 2 cut(s) 984, 1349
BseNI ACTGG 2 cut(s) 297, 741
BseRI GAGGAG 3 cut(s) 98, 197, 206
BseSI GKGCMC 1 cut(s) 71
BseXI GCAGC 5 cut(s) 71, 267, 323, 1128, 1354
BseYI CCCAGC 1 cut(s) 1459
Bsh1285I CGRYCG 1 cut(s) 546
BshFI GGCC 1 cut(s) 1410
BshNI GGYRCC 1 cut(s) 403
BsiEI CGRYCG 1 cut(s) 546
BsiHKAI GWGCWC 2 cut(s) 71, 1227
BslFI GGGAC 3 cut(s) 1175, 1185, 1288
BslI CCNNNNNNNGG 6 cut(s) 268, 301, 637, 759, 760, 1014
BsmAI GTCTC 2 cut(s) 20, 1505
BsmBI CGTCTC 1 cut(s) 20
BsmFI GGGAC 3 cut(s) 1175, 1185, 1288
BsnI GGCC 1 cut(s) 1410
Bsp119I TTCGAA 2 cut(s) 159, 1113
Bsp1286I GDGCHC 4 cut(s) 71, 805, 1227, 1336
Bsp143I GATC 5 cut(s) 75, 375, 543, 1018, 1083
Bsp19I CCATGG 1 cut(s) 1423
BspACI CCGC 1 cut(s) 1289
BspANI GGCC 1 cut(s) 1410
BspCNI CTCAG 2 cut(s) 985, 1348
BspLI GGNNCC 1 cut(s) 405
BspMAI CTGCAG 1 cut(s) 1146
BspPI GGATC 2 cut(s) 1026, 1078
BspT104I TTCGAA 2 cut(s) 159, 1113
BspT107I GGYRCC 1 cut(s) 403
BsrDI GCAATG 1 cut(s) 754
BsrI ACTGG 2 cut(s) 297, 741
BssECI CCNNGG 3 cut(s) 354, 1193, 1423
BssMI GATC 5 cut(s) 75, 375, 543, 1018, 1083
BssSI CACGAG 2 cut(s) 1022, 1159
BssT1I CCWWGG 2 cut(s) 1193, 1423
Bst2BI CACGAG 2 cut(s) 1022, 1159
Bst4CI ACNGT 5 cut(s) 73, 223, 386, 408, 493
Bst6I CTCTTC 3 cut(s) 161, 1082, 1103
BstAPI GCANNNNNTGC 2 cut(s) 280, 436
BstBI TTCGAA 2 cut(s) 159, 1113
BstC8I GCNNGC 2 cut(s) 893, 939
BstDEI CTNAG 6 cut(s) 951, 993, 1335, 1482, 1497, 1515
BstDSI CCRYGG 1 cut(s) 1423
BstEII GGTNACC 1 cut(s) 595
BstF5I GGATG 2 cut(s) 1092, 1510
BstH2I RGCGCY 2 cut(s) 106, 1361
BstHHI GCGC 2 cut(s) 105, 1360
BstKTI GATC 5 cut(s) 78, 378, 546, 1021, 1086
BstMAI GTCTC 2 cut(s) 20, 1505
BstMBI GATC 5 cut(s) 75, 375, 543, 1018, 1083
BstMCI CGRYCG 1 cut(s) 546
BstMWI GCNNNNNNNGC 6 cut(s) 280, 436, 1262, 1364, 1376, 1483
BstNSI RCATGY 2 cut(s) 1004, 1310
BstPI GGTNACC 1 cut(s) 595
BstSFI CTRYAG 2 cut(s) 1142, 1228
BstSLI GKGCMC 1 cut(s) 71
BstV1I GCAGC 5 cut(s) 71, 267, 323, 1128, 1354
BstV2I GAAGAC 2 cut(s) 217, 490
BstX2I RGATCY 1 cut(s) 1018
BstXI CCANNNNNNTGG 2 cut(s) 91, 1430
BstYI RGATCY 1 cut(s) 1018
BsuRI GGCC 1 cut(s) 1410
BtgI CCRYGG 1 cut(s) 1423
BtsCI GGATG 2 cut(s) 1092, 1510
BtsI GCAGTG 1 cut(s) 69
BtsIMutI CAGTG 5 cut(s) 69, 69, 219, 304, 489
Cac8I GCNNGC 2 cut(s) 893, 939
CfoI GCGC 2 cut(s) 105, 1360
CseI GACGC 1 cut(s) 241
Csp6I GTAC 3 cut(s) 37, 127, 404
CviAII CATG 9 cut(s) 48, 285, 470, 602, 793, 983, 1001, 1307, 1424
CviQI GTAC 3 cut(s) 37, 127, 404
DdeI CTNAG 6 cut(s) 951, 993, 1335, 1482, 1497, 1515
DpnI GATC 5 cut(s) 77, 377, 545, 1020, 1085
DpnII GATC 5 cut(s) 75, 375, 543, 1018, 1083
Eam1104I CTCTTC 3 cut(s) 161, 1082, 1103
EarI CTCTTC 3 cut(s) 161, 1082, 1103
Eco130I CCWWGG 2 cut(s) 1193, 1423
Eco24I GRGCYC 2 cut(s) 805, 1336
Eco91I GGTNACC 1 cut(s) 595
EcoO65I GGTNACC 1 cut(s) 595
EcoRI GAATTC 1 cut(s) 1452
EcoT14I CCWWGG 2 cut(s) 1193, 1423
EcoT22I ATGCAT 1 cut(s) 703
EcoT38I GRGCYC 2 cut(s) 805, 1336
ErhI CCWWGG 2 cut(s) 1193, 1423
Esp3I CGTCTC 1 cut(s) 20
FaeI CATG 9 cut(s) 51, 288, 473, 605, 796, 986, 1004, 1310, 1427
FalI AAGNNNNNCTT 6 cut(s) 140, 172, 171, 203, 1305, 1337
FaqI GGGAC 3 cut(s) 1175, 1185, 1288
FatI CATG 9 cut(s) 47, 284, 469, 601, 792, 982, 1000, 1306, 1423
Fnu4HI GCNGC 6 cut(s) 60, 281, 312, 1142, 1290, 1368
FokI GGATG 2 cut(s) 1079, 1517
FriOI GRGCYC 2 cut(s) 805, 1336
Fsp4HI GCNGC 6 cut(s) 60, 281, 312, 1142, 1290, 1368
FspBI CTAG 2 cut(s) 458, 1194
GlaI GCGC 2 cut(s) 104, 1359
GluI GCNGC 6 cut(s) 60, 281, 312, 1142, 1290, 1368
GsaI CCCAGC 1 cut(s) 1463
GsuI CTGGAG 1 cut(s) 977
HaeII RGCGCY 2 cut(s) 106, 1361
HaeIII GGCC 1 cut(s) 1410
HgaI GACGC 1 cut(s) 241
HhaI GCGC 2 cut(s) 105, 1360
Hin1II CATG 9 cut(s) 51, 288, 473, 605, 796, 986, 1004, 1310, 1427
Hin6I GCGC 2 cut(s) 103, 1358
HinP1I GCGC 2 cut(s) 103, 1358
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HindIII AAGCTT 2 cut(s) 344, 423
HinfI GANTC 5 cut(s) 359, 539, 563, 677, 1157
HphI GGTGA 1 cut(s) 23
Hpy166II GTNNAC 3 cut(s) 39, 69, 607
Hpy188I TCNGA 6 cut(s) 335, 503, 568, 718, 1039, 1338
Hpy188III TCNNGA 5 cut(s) 580, 907, 1081, 1132, 1401
Hpy8I GTNNAC 3 cut(s) 39, 69, 607
Hpy99I CGWCG 2 cut(s) 83, 257
HpyAV CCTTC 8 cut(s) 14, 330, 487, 934, 1007, 1132, 1333, 1348
HpyCH4III ACNGT 5 cut(s) 73, 223, 386, 408, 493
HpyCH4IV ACGT 2 cut(s) 29, 234
HpyF10VI GCNNNNNNNGC 6 cut(s) 280, 436, 1262, 1364, 1376, 1483
HpyF3I CTNAG 6 cut(s) 951, 993, 1335, 1482, 1497, 1515
HpySE526I ACGT 2 cut(s) 29, 234
Hsp92II CATG 9 cut(s) 51, 288, 473, 605, 796, 986, 1004, 1310, 1427
HspAI GCGC 2 cut(s) 103, 1358
KpnI GGTACC 1 cut(s) 407
Kzo9I GATC 5 cut(s) 75, 375, 543, 1018, 1083
LmnI GCTCC 5 cut(s) 184, 219, 271, 925, 958
Lsp1109I GCAGC 5 cut(s) 71, 267, 323, 1128, 1354
LweI GCATC 5 cut(s) 283, 360, 439, 710, 1366
MaeI CTAG 2 cut(s) 458, 1194
MaeII ACGT 2 cut(s) 29, 234
MaeIII GTNAC 7 cut(s) 380, 472, 595, 706, 724, 1181, 1232
MalI GATC 5 cut(s) 77, 377, 545, 1020, 1085
MboI GATC 5 cut(s) 75, 375, 543, 1018, 1083
MfeI CAATTG 1 cut(s) 974
MflI RGATCY 1 cut(s) 1018
MhlI GDGCHC 4 cut(s) 71, 805, 1227, 1336
MlyI GAGTC 1 cut(s) 1151
Mph1103I ATGCAT 1 cut(s) 703
MroXI GAANNNNTTC 2 cut(s) 347, 573
MseI TTAA 6 cut(s) 177, 510, 819, 885, 1299, 1344
MslI CAYNNNNRTG 2 cut(s) 1220, 1428
MspA1I CMGCKG 1 cut(s) 1459
MunI CAATTG 1 cut(s) 974
MwoI GCNNNNNNNGC 6 cut(s) 280, 436, 1262, 1364, 1376, 1483
NcoI CCATGG 1 cut(s) 1423
NdeII GATC 5 cut(s) 75, 375, 543, 1018, 1083
NlaIII CATG 9 cut(s) 51, 288, 473, 605, 796, 986, 1004, 1310, 1427
NlaIV GGNNCC 1 cut(s) 405
NmeAIII GCCGAG 1 cut(s) 379
NmuCI GTSAC 3 cut(s) 472, 706, 724
NsiI ATGCAT 1 cut(s) 703
NspI RCATGY 2 cut(s) 1004, 1310
NspV TTCGAA 2 cut(s) 159, 1113
PciI ACATGT 1 cut(s) 1000
PdmI GAANNNNTTC 2 cut(s) 347, 573
PfeI GAWTC 4 cut(s) 359, 539, 563, 677
PflMI CCANNNNNTGG 2 cut(s) 268, 637
PkrI GCNGC 6 cut(s) 61, 282, 313, 1143, 1291, 1369
Ple19I CGATCG 1 cut(s) 546
PleI GAGTC 1 cut(s) 1151
PpsI GAGTC 1 cut(s) 1151
PscI ACATGT 1 cut(s) 1000
PshBI ATTAAT 1 cut(s) 885
PspEI GGTNACC 1 cut(s) 595
PspFI CCCAGC 1 cut(s) 1459
PspN4I GGNNCC 1 cut(s) 405
PstI CTGCAG 1 cut(s) 1146
PsuI RGATCY 1 cut(s) 1018
PvuI CGATCG 1 cut(s) 546
PvuII CAGCTG 1 cut(s) 1459
RsaI GTAC 3 cut(s) 38, 128, 405
RsaNI GTAC 3 cut(s) 37, 127, 404
RseI CAYNNNNRTG 2 cut(s) 1220, 1428
SaqAI TTAA 6 cut(s) 177, 510, 819, 885, 1299, 1344
SatI GCNGC 6 cut(s) 60, 281, 312, 1142, 1290, 1368
Sau3AI GATC 5 cut(s) 75, 375, 543, 1018, 1083
ScaI AGTACT 1 cut(s) 128
SchI GAGTC 1 cut(s) 1151
SduI GDGCHC 4 cut(s) 71, 805, 1227, 1336
SfaNI GCATC 5 cut(s) 283, 360, 439, 710, 1366
SfcI CTRYAG 2 cut(s) 1142, 1228
SfuI TTCGAA 2 cut(s) 159, 1113
SmiMI CAYNNNNRTG 2 cut(s) 1220, 1428
SmlI CTYRAG 1 cut(s) 578
SmoI CTYRAG 1 cut(s) 578
SsiI CCGC 1 cut(s) 1289
SspI AATATT 2 cut(s) 883, 1296
SspMI CTAG 2 cut(s) 458, 1194
StyI CCWWGG 2 cut(s) 1193, 1423
TaaI ACNGT 5 cut(s) 73, 223, 386, 408, 493
TaiI ACGT 2 cut(s) 32, 237
TaqI TCGA 5 cut(s) 99, 159, 542, 1113, 1155
TatI WGTACW 2 cut(s) 36, 126
TauI GCSGC 1 cut(s) 1292
TfiI GAWTC 4 cut(s) 359, 539, 563, 677
Tru1I TTAA 6 cut(s) 177, 510, 819, 885, 1299, 1344
Tru9I TTAA 6 cut(s) 177, 510, 819, 885, 1299, 1344
TscAI CASTG 5 cut(s) 69, 76, 226, 304, 496
TseFI GTSAC 3 cut(s) 472, 706, 724
TseI GCWGC 5 cut(s) 59, 280, 311, 1141, 1367
Tsp45I GTSAC 3 cut(s) 472, 706, 724
TspDTI ATGAA 5 cut(s) 193, 733, 893, 1081, 1204
TspGWI ACGGA 1 cut(s) 132
TspRI CASTG 5 cut(s) 69, 76, 226, 304, 496
Van91I CCANNNNNTGG 2 cut(s) 268, 637
VneI GTGCAC 1 cut(s) 67
VspI ATTAAT 1 cut(s) 885
XapI RAATTY 5 cut(s) 513, 652, 773, 1452, 1466
XceI RCATGY 2 cut(s) 1004, 1310
XmaJI CCTAGG 1 cut(s) 1193
XmnI GAANNNNTTC 2 cut(s) 347, 573
XspI CTAG 2 cut(s) 458, 1194
ZrmI AGTACT 1 cut(s) 128
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.