Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0006310

Physical Location & Seq

Genomic Coordinates Reverse (-)

12527553 .. 12531676

Gene Structure 4124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g11510.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGGATCACCGTGACCCCTACCAGTCCCGCCTCATCGGAGACTACATACTGGGCCCCAAAGTCGGGTCGGGTTCCTTCGCGGTTGTTTGGCGCTCACGGCACCGACAACTCGGCACTGAAGTTGCCGTCAAAGAAATCGACAAGAAGCCACTGAGCCCAAAAGTCAGCGACAACGTACTCAAAGAAATATCCATTCTCAGCACCATCAACCACCCCAACATCATTCGCCTTTTCGAGGCCATCGAGACCGAGGACAGAATCTACCTTGTGCTGGAGTACTGTGACGGCGGCGACCTGGCGGATTATATTCGCCGACATGGGAAGGTTTCAGAAACTGTTGCCAGGCACTTTATGAGGCAATTGGCTGCAGGCCTGCAAGTGCTTCAAGAAAAGCACCTCATTCATAGGGATTTAAAACCGCAGAACTTACTCTTGTCAACGACGGTTGAAGATACCCCACTGTTGAAGATTGGGGATTTTGGTTTTGCAAGATCCCTCATTGGGGGCTTGGCTGATACACTATGTGGTTCACCACTGTACATGGCTCCAGAGATTATTCAGAACCAAAAGTATGATGAAAAGGCCGATTTGTGGAGCGTTGGAGCAATTTTGTTTCAGCTGGTGACCGGGAAGCCACCATTTGATGGGAATAATCATTTACAGCTTTTCCAAAATATTCTGACATCGACTGAGCTGAGGTTTCCAGATGGTGCTTTAGAAGAATTGCATCCAGATTGTGTAGATCTCTGCAGAAGCCTGTTACGTCTAAAGCCAGCTGAGCGACTATCATTTACGGAGTTCTTCAATCACAAATTCCTCAGAGATTCTAGGTATCAAGTGGATGTTGGTCACCCTTCAGTGCTTCCACCGCTTCAATCCACGGTCGAACAGCCTAGTTCTTCTGTCTCCGACAATATACTGCAAATGCATTTATGGCAAACTACCAACTCATCTATTACCCGAGATCCAAACTCGCAGGATCAGCTTCGAGTTTCTGATTCAATGGAGTCCATCGAGAAGGACTATGTTATGGTCGATTCTTTCTCTCATTACCTTGAATCTTCCCTGCCACTTCATTCCACAACGGGAGCTTCTCTCAGGGCTTCAAAGCAGAAAGATCGTGATAAAACAGTTATAGTGAAAACCAAGGAGCAGGTAGCTAGTTCTGTGGGTGCAGAAAGTTCACAAACTAGCGGATCAGCTAAATTACCAGCATCTTGTGAATCAGCACTGTTACTAGAAGTGCAAGGACTATCTATACTGCATCCTTCTACTAGGCTCCATCTTTTACATCAGTATGCTCAGGTTCTTGCAGACTTGTCGCAGGAAAAGTACAATGCAGGACTATTTCTAGACTCGTTTTCGGTTCAACTTCTTGTTTTGGCCATATGGAAGAAATCTATTCAAATTTGCAGCACTTGGCTGGCATCATCTAAAGAGGATAAATCACCTGAAGGTAGCTCAGCGAATGAATCCTTGCAGGGAGGTGCAGCCTTATCAACAAAAGCCTCAGAAAATGTAGATTTTAGCCGGCCTTCATCTGTTTTGATGTGGGCAGAGCAAGGTTTCATTGTTGCTGTTGATCGAGCAGAGAGGCTATCCTATCATATCCAAGAAATGGATGGTGCTGCTGAATTGCCGGATGCCATGGAAATTATTTACCAAAAAGCGCTCAAAGTTGGCACAAGTGGTGCTGTAGACGAGTACATGGAGAACAAAGGCAGTGTCGAAGCATTGTACTCCAAGGCTATGCTTCTCCTTTCTTTTATTGCAGGAGAAGCAACGTCTCTGCCACTAACACCTCCGTTTTCCCTAACTCCTGCCAACAAGAAGCGAATCCAACAATATATTCAGAACTTGGAGTCCCGTCGGATCAACTTTCTGAAATCACAGCCTGCTCCTGTGCAAGCCCGCGGCTCCTCGGCAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005776 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0061919

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04139 ko04140 ko04150 ko04212 map04136 map04138 map04139 map04140 map04150 map04212

Pfam Domains

Protein Families

Pkinase

Protein Analysis

644

Amino Acids

71.36

Weight (kDa)

6.01

Isoelectric Point (pI)

49.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61960 AT3G61960
fragaria_vesca	FvH4_7g17860 FvH4_7g17860 FvH4_7g17860 FvH4_7g17860 FvH4_7g17860
malus_domestica	MD01G1091000.v1.1 MD07G1161200.v1.1
prunus_persica	Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1
pyrus_communis	pycom01g11510
rosa_chinensis	RchiOBHm_Chr1g0361311
rosa_laevigata	RLG00000027726
rosa_multiflora	Rmu_sc0002119.1_g000030
rosa_roxburghii	Rroxscaffold_4G00295060
rosa_rugosa	Rorug01G0288200
rosa_samantha	Rh1AG299400 Rh1BG263200 Rh1CG280700 Rh1DG293300 Rh4BG414700
rosa_wichuraiana	Rw1G026490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1144
AccB1I	GGYRCC	1 cut(s)	99
AccB7I	CCANNNNNTGG	2 cut(s)	644, 1618
AccI	GTMKAC	1 cut(s)	1698
AccII	CGCG	2 cut(s)	80, 1914
AciI	CCGC	9 cut(s)	28, 80, 288, 299, 419, 869, 1194, 1912, 1914
AclWI	GGATC	6 cut(s)	12, 486, 959, 987, 1204, 1880
AcoI	YGGCCR	1 cut(s)	1383
AcsI	RAATTY	2 cut(s)	812, 1407
AcuI	CTGAAG	3 cut(s)	138, 840, 1473
AdeI	CACNNNGTG	1 cut(s)	524
AfaI	GTAC	6 cut(s)	177, 278, 539, 1334, 1706, 1739
AfeI	AGCGCT	1 cut(s)	1671
AfiI	CCNNNNNNNGG	9 cut(s)	62, 63, 235, 271, 501, 502, 591, 644, 1618
AjnI	CCWGG	2 cut(s)	294, 341
AjuI	GAANNNNNNNTTGG	2 cut(s)	1833, 1865
AloI	GAACNNNNNNTCC	2 cut(s)	1847, 1879
AluBI	AGCT	9 cut(s)	619, 664, 694, 776, 985, 1091, 1160, 1202, 1461
AluI	AGCT	9 cut(s)	619, 664, 694, 776, 985, 1091, 1160, 1202, 1461
Alw26I	GTCTC	4 cut(s)	33, 239, 910, 1791
AlwI	GGATC	6 cut(s)	12, 486, 959, 987, 1204, 1880
AlwNI	CAGNNNCTG	1 cut(s)	335
Ama87I	CYCGRG	1 cut(s)	960
Aor51HI	AGCGCT	1 cut(s)	1671
AoxI	GGCC	6 cut(s)	52, 237, 370, 582, 1383, 1532
ApaI	GGGCCC	1 cut(s)	56
ApeKI	GCWGC	4 cut(s)	365, 1413, 1490, 1628
ApoI	RAATTY	2 cut(s)	812, 1407
ArsI	GACNNNNNNTTYG	2 cut(s)	1710, 1742
AspLEI	GCGC	2 cut(s)	93, 1672
AspS9I	GGNCC	2 cut(s)	52, 53
AsuC2I	CCSGG	1 cut(s)	628
AsuHPI	GGTGA	4 cut(s)	522, 634, 842, 1440
AvaI	CYCGRG	1 cut(s)	960
BaeGI	GKGCMC	1 cut(s)	56
BalI	TGGCCA	1 cut(s)	1385
BanI	GGYRCC	1 cut(s)	99
BanII	GRGCYC	2 cut(s)	56, 158
BbvCI	CCTCAGC	1 cut(s)	695
BbvI	GCAGC	4 cut(s)	352, 1425, 1502, 1615
BccI	CCATC	7 cut(s)	212, 248, 638, 701, 1019, 1290, 1616
BceAI	ACGGC	3 cut(s)	110, 113, 301
BcgI	CGANNNNNNTGC	4 cut(s)	1100, 1134, 1302, 1336
BciT130I	CCWGG	2 cut(s)	296, 343
BcnI	CCSGG	1 cut(s)	628
BcoDI	GTCTC	4 cut(s)	33, 239, 910, 1791
BfaI	CTAG	7 cut(s)	828, 894, 1161, 1191, 1238, 1275, 1352
BfmI	CTRYAG	3 cut(s)	366, 748, 1695
BfoI	RGCGCY	2 cut(s)	94, 1673
BfuAI	ACCTGC	1 cut(s)	1144
BglII	AGATCT	1 cut(s)	742
BisI	GCNGC	6 cut(s)	289, 366, 1414, 1491, 1629, 1915
BlpI	GCTNAGC	2 cut(s)	777, 1462
BlsI	GCNGC	6 cut(s)	290, 367, 1415, 1492, 1630, 1916
BmcAI	AGTACT	1 cut(s)	278
Bme1390I	CCNGG	3 cut(s)	296, 343, 628
BmeT110I	CYCGRG	1 cut(s)	960
BmgT120I	GGNCC	2 cut(s)	52, 53
BmiI	GGNNCC	7 cut(s)	54, 55, 73, 101, 546, 1280, 1918
BmrFI	CCNGG	3 cut(s)	296, 343, 628
BmrI	ACTGGG	1 cut(s)	59
BmsI	GCATC	5 cut(s)	736, 1223, 1273, 1436, 1633
BmuI	ACTGGG	1 cut(s)	59
BplI	GAGNNNNNCTC	2 cut(s)	1080, 1112
BpmI	CTGGAG	2 cut(s)	293, 531
Bpu10I	CCTNAGC	2 cut(s)	695, 1302
Bpu1102I	GCTNAGC	2 cut(s)	777, 1462
BpuMI	CCSGG	1 cut(s)	628
BsaI	GGTCTC	1 cut(s)	239
BsaJI	CCNNGG	7 cut(s)	249, 879, 1146, 1647, 1743, 1912, 1920
Bsc4I	CCNNNNNNNGG	9 cut(s)	62, 63, 235, 271, 501, 502, 591, 644, 1618
Bse118I	RCCGGY	1 cut(s)	1530
Bse1I	ACTGG	2 cut(s)	22, 54
BseBI	CCWGG	2 cut(s)	296, 343
BseDI	CCNNGG	7 cut(s)	249, 879, 1146, 1647, 1743, 1912, 1920
BseGI	GGATG	5 cut(s)	727, 847, 1264, 1627, 1648
BseLI	CCNNNNNNNGG	9 cut(s)	62, 63, 235, 271, 501, 502, 591, 644, 1618
BseNI	ACTGG	2 cut(s)	22, 54
BseRI	GAGGAG	1 cut(s)	1909
BseSI	GKGCMC	1 cut(s)	56
BseXI	GCAGC	4 cut(s)	352, 1425, 1502, 1615
BsgI	GTGCAG	2 cut(s)	1194, 1509
Bsh1236I	CGCG	2 cut(s)	80, 1914
Bsh1285I	CGRYCG	1 cut(s)	885
BshFI	GGCC	6 cut(s)	54, 239, 372, 584, 1385, 1534
BshNI	GGYRCC	1 cut(s)	99
BsiEI	CGRYCG	1 cut(s)	885
BsiHKCI	CYCGRG	1 cut(s)	960
BsiSI	CCGG	3 cut(s)	627, 1531, 1640
BslFI	GGGAC	2 cut(s)	10, 1849
BslI	CCNNNNNNNGG	9 cut(s)	62, 63, 235, 271, 501, 502, 591, 644, 1618
BsmAI	GTCTC	4 cut(s)	33, 239, 910, 1791
BsmBI	CGTCTC	1 cut(s)	1791
BsmFI	GGGAC	2 cut(s)	10, 1849
BsnI	GGCC	6 cut(s)	54, 239, 372, 584, 1385, 1534
Bso31I	GGTCTC	1 cut(s)	239
BsoBI	CYCGRG	1 cut(s)	960
Bsp120I	GGGCCC	1 cut(s)	52
Bsp1286I	GDGCHC	2 cut(s)	56, 158
Bsp1407I	TGTACA	1 cut(s)	537
Bsp143I	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
Bsp1720I	GCTNAGC	2 cut(s)	777, 1462
Bsp19I	CCATGG	1 cut(s)	1647
BspACI	CCGC	9 cut(s)	28, 80, 288, 299, 419, 869, 1194, 1912, 1914
BspANI	GGCC	6 cut(s)	54, 239, 372, 584, 1385, 1534
BspFNI	CGCG	2 cut(s)	80, 1914
BspLI	GGNNCC	7 cut(s)	54, 55, 73, 101, 546, 1280, 1918
BspMAI	CTGCAG	2 cut(s)	370, 752
BspMI	ACCTGC	1 cut(s)	1144
BspPI	GGATC	6 cut(s)	12, 486, 959, 987, 1204, 1880
BspT107I	GGYRCC	1 cut(s)	99
BspTNI	GGTCTC	1 cut(s)	239
BsrFI	RCCGGY	1 cut(s)	1530
BsrGI	TGTACA	1 cut(s)	537
BsrI	ACTGG	2 cut(s)	22, 54
BssAI	RCCGGY	1 cut(s)	1530
BssECI	CCNNGG	7 cut(s)	249, 879, 1146, 1647, 1743, 1912, 1920
BssMI	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
BssT1I	CCWWGG	3 cut(s)	1146, 1647, 1743
Bst2UI	CCWGG	2 cut(s)	296, 343
Bst4CI	ACNGT	9 cut(s)	11, 281, 337, 445, 462, 537, 883, 1132, 1233
BstAUI	TGTACA	1 cut(s)	537
BstC8I	GCNNGC	8 cut(s)	370, 374, 774, 1425, 1532, 1896, 1908, 1912
BstDSI	CCRYGG	3 cut(s)	879, 1647, 1912
BstEII	GGTNACC	2 cut(s)	622, 848
BstENI	CCTNNNNNAGG	1 cut(s)	233
BstF5I	GGATG	5 cut(s)	727, 847, 1264, 1627, 1648
BstFNI	CGCG	2 cut(s)	80, 1914
BstH2I	RGCGCY	2 cut(s)	94, 1673
BstHHI	GCGC	2 cut(s)	93, 1672
BstKTI	GATC	9 cut(s)	7, 494, 745, 967, 982, 1120, 1199, 1585, 1875
BstMAI	GTCTC	4 cut(s)	33, 239, 910, 1791
BstMBI	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
BstMCI	CGRYCG	1 cut(s)	885
BstMWI	GCNNNNNNNGC	6 cut(s)	97, 778, 868, 934, 982, 1778
BstNI	CCWGG	2 cut(s)	296, 343
BstPI	GGTNACC	2 cut(s)	622, 848
BstSCI	CCNGG	3 cut(s)	294, 341, 626
BstSFI	CTRYAG	3 cut(s)	366, 748, 1695
BstSLI	GKGCMC	1 cut(s)	56
BstUI	CGCG	2 cut(s)	80, 1914
BstV1I	GCAGC	4 cut(s)	352, 1425, 1502, 1615
BstX2I	RGATCY	3 cut(s)	491, 742, 964
BstYI	RGATCY	3 cut(s)	491, 742, 964
BsuRI	GGCC	6 cut(s)	54, 239, 372, 584, 1385, 1534
BtgI	CCRYGG	3 cut(s)	879, 1647, 1912
BtsCI	GGATG	5 cut(s)	727, 847, 1264, 1627, 1648
BtsI	GCAGTG	1 cut(s)	1729
BtsIMutI	CAGTG	7 cut(s)	114, 149, 458, 533, 864, 1229, 1729
BveI	ACCTGC	1 cut(s)	1144
Cac8I	GCNNGC	8 cut(s)	370, 374, 774, 1425, 1532, 1896, 1908, 1912
CaiI	CAGNNNCTG	1 cut(s)	335
CfoI	GCGC	2 cut(s)	93, 1672
Cfr10I	RCCGGY	1 cut(s)	1530
Cfr13I	GGNCC	2 cut(s)	52, 53
Cfr42I	CCGCGG	1 cut(s)	1915
Csp6I	GTAC	6 cut(s)	176, 277, 538, 1333, 1705, 1738
CviAII	CATG	4 cut(s)	317, 541, 1648, 1708
CviQI	GTAC	6 cut(s)	176, 277, 538, 1333, 1705, 1738
DpnI	GATC	9 cut(s)	6, 493, 744, 966, 981, 1119, 1198, 1584, 1874
DpnII	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
DraI	TTTAAA	1 cut(s)	414
DraIII	CACNNNGTG	1 cut(s)	524
EaeI	YGGCCR	1 cut(s)	1383
EciI	GGCGGA	1 cut(s)	314
Eco130I	CCWWGG	3 cut(s)	1146, 1647, 1743
Eco147I	AGGCCT	1 cut(s)	372
Eco24I	GRGCYC	2 cut(s)	56, 158
Eco31I	GGTCTC	1 cut(s)	239
Eco47III	AGCGCT	1 cut(s)	1671
Eco57I	CTGAAG	3 cut(s)	138, 840, 1473
Eco88I	CYCGRG	1 cut(s)	960
Eco91I	GGTNACC	2 cut(s)	622, 848
EcoNI	CCTNNNNNAGG	1 cut(s)	233
EcoO109I	RGGNCCY	1 cut(s)	53
EcoO65I	GGTNACC	2 cut(s)	622, 848
EcoRII	CCWGG	2 cut(s)	294, 341
EcoT14I	CCWWGG	3 cut(s)	1146, 1647, 1743
EcoT22I	ATGCAT	1 cut(s)	930
EcoT38I	GRGCYC	2 cut(s)	56, 158
ErhI	CCWWGG	3 cut(s)	1146, 1647, 1743
Esp3I	CGTCTC	1 cut(s)	1791
FaeI	CATG	4 cut(s)	320, 544, 1651, 1711
FaqI	GGGAC	2 cut(s)	10, 1849
FatI	CATG	4 cut(s)	316, 540, 1647, 1707
FauI	CCCGC	2 cut(s)	35, 1919
FauNDI	CATATG	1 cut(s)	1388
FblI	GTMKAC	1 cut(s)	1698
Fnu4HI	GCNGC	6 cut(s)	289, 366, 1414, 1491, 1629, 1915
FokI	GGATG	5 cut(s)	714, 854, 1251, 1634, 1655
FriOI	GRGCYC	2 cut(s)	56, 158
Fsp4HI	GCNGC	6 cut(s)	289, 366, 1414, 1491, 1629, 1915
FspBI	CTAG	7 cut(s)	828, 894, 1161, 1191, 1238, 1275, 1352
GlaI	GCGC	2 cut(s)	92, 1671
GluI	GCNGC	6 cut(s)	289, 366, 1414, 1491, 1629, 1915
GsuI	CTGGAG	2 cut(s)	293, 531
HaeII	RGCGCY	2 cut(s)	94, 1673
HaeIII	GGCC	6 cut(s)	54, 239, 372, 584, 1385, 1534
HapII	CCGG	3 cut(s)	627, 1531, 1640
HhaI	GCGC	2 cut(s)	93, 1672
Hin1II	CATG	4 cut(s)	320, 544, 1651, 1711
Hin6I	GCGC	2 cut(s)	91, 1670
HinP1I	GCGC	2 cut(s)	91, 1670
HincII	GTYRAC	1 cut(s)	438
HindII	GTYRAC	1 cut(s)	438
HpaII	CCGG	3 cut(s)	627, 1531, 1640
HphI	GGTGA	4 cut(s)	522, 634, 842, 1440
Hpy166II	GTNNAC	4 cut(s)	438, 530, 1184, 1699
Hpy188III	TCNNGA	8 cut(s)	244, 386, 548, 704, 731, 1015, 1121, 1352
Hpy8I	GTNNAC	4 cut(s)	438, 530, 1184, 1699
Hpy99I	CGWCG	2 cut(s)	445, 1872
HpyAV	CCTTC	7 cut(s)	85, 316, 864, 1012, 1278, 1448, 1545
HpyCH4III	ACNGT	9 cut(s)	11, 281, 337, 445, 462, 537, 883, 1132, 1233
HpyCH4IV	ACGT	3 cut(s)	174, 763, 1784
HpyF10VI	GCNNNNNNNGC	6 cut(s)	97, 778, 868, 934, 982, 1778
HpySE526I	ACGT	3 cut(s)	174, 763, 1784
Hsp92II	CATG	4 cut(s)	320, 544, 1651, 1711
HspAI	GCGC	2 cut(s)	91, 1670
KroI	GCCGGC	1 cut(s)	1530
KroNI	GCCGGC	1 cut(s)	1532
KspI	CCGCGG	1 cut(s)	1915
Kzo9I	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
LmnI	GCTCC	8 cut(s)	550, 594, 602, 1088, 1150, 1284, 1903, 1922
Lsp1109I	GCAGC	4 cut(s)	352, 1425, 1502, 1615
LweI	GCATC	5 cut(s)	736, 1223, 1273, 1436, 1633
MaeI	CTAG	7 cut(s)	828, 894, 1161, 1191, 1238, 1275, 1352
MaeII	ACGT	3 cut(s)	174, 763, 1784
MaeIII	GTNAC	6 cut(s)	11, 281, 622, 759, 848, 1233
MalI	GATC	9 cut(s)	6, 493, 744, 966, 981, 1119, 1198, 1584, 1874
MboI	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
MboII	GAAGA	7 cut(s)	461, 478, 731, 793, 891, 1053, 1405
MfeI	CAATTG	1 cut(s)	359
MflI	RGATCY	3 cut(s)	491, 742, 964
MhlI	GDGCHC	2 cut(s)	56, 158
MlsI	TGGCCA	1 cut(s)	1385
MluCI	AATT	8 cut(s)	359, 606, 722, 812, 1205, 1407, 1634, 1653
MluNI	TGGCCA	1 cut(s)	1385
MlyI	GAGTC	3 cut(s)	1016, 1349, 1871
MmeI	TCCRAC	4 cut(s)	580, 933, 1850, 1864
Mox20I	TGGCCA	1 cut(s)	1385
Mph1103I	ATGCAT	1 cut(s)	930
MroNI	GCCGGC	1 cut(s)	1530
MscI	TGGCCA	1 cut(s)	1385
MseI	TTAA	1 cut(s)	413
MslI	CAYNNNNRTG	1 cut(s)	1296
Msp20I	TGGCCA	1 cut(s)	1385
MspA1I	CMGCKG	3 cut(s)	619, 776, 1914
MspI	CCGG	3 cut(s)	627, 1531, 1640
MspR9I	CCNGG	3 cut(s)	296, 343, 628
MunI	CAATTG	1 cut(s)	359
MvaI	CCWGG	2 cut(s)	296, 343
MvnI	CGCG	2 cut(s)	80, 1914
MwoI	GCNNNNNNNGC	6 cut(s)	97, 778, 868, 934, 982, 1778
NaeI	GCCGGC	1 cut(s)	1532
NciI	CCSGG	1 cut(s)	628
NcoI	CCATGG	1 cut(s)	1647
NdeI	CATATG	1 cut(s)	1388
NdeII	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
NgoMIV	GCCGGC	1 cut(s)	1530
NlaIII	CATG	4 cut(s)	320, 544, 1651, 1711
NlaIV	GGNNCC	7 cut(s)	54, 55, 73, 101, 546, 1280, 1918
NmeAIII	GCCGAG	2 cut(s)	90, 1901
NmuCI	GTSAC	4 cut(s)	11, 281, 622, 848
NsiI	ATGCAT	1 cut(s)	930
PceI	AGGCCT	1 cut(s)	372
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PdiI	GCCGGC	1 cut(s)	1532
PfeI	GAWTC	8 cut(s)	258, 824, 998, 1037, 1058, 1223, 1472, 1836
PflMI	CCANNNNNTGG	2 cut(s)	644, 1618
PkrI	GCNGC	6 cut(s)	290, 367, 1415, 1492, 1630, 1916
PleI	GAGTC	3 cut(s)	1015, 1349, 1870
PpsI	GAGTC	3 cut(s)	1015, 1349, 1870
Psp6I	CCWGG	2 cut(s)	294, 341
PspEI	GGTNACC	2 cut(s)	622, 848
PspGI	CCWGG	2 cut(s)	294, 341
PspN4I	GGNNCC	7 cut(s)	54, 55, 73, 101, 546, 1280, 1918
PspOMI	GGGCCC	1 cut(s)	52
PspPI	GGNCC	2 cut(s)	52, 53
PstI	CTGCAG	2 cut(s)	370, 752
PstNI	CAGNNNCTG	1 cut(s)	335
PsuI	RGATCY	3 cut(s)	491, 742, 964
PvuII	CAGCTG	2 cut(s)	619, 776
RsaI	GTAC	6 cut(s)	177, 278, 539, 1334, 1706, 1739
RsaNI	GTAC	6 cut(s)	176, 277, 538, 1333, 1705, 1738
RseI	CAYNNNNRTG	1 cut(s)	1296
SacII	CCGCGG	1 cut(s)	1915
SaqAI	TTAA	1 cut(s)	413
SatI	GCNGC	6 cut(s)	289, 366, 1414, 1491, 1629, 1915
Sau3AI	GATC	9 cut(s)	4, 491, 742, 964, 979, 1117, 1196, 1582, 1872
Sau96I	GGNCC	2 cut(s)	52, 53
ScaI	AGTACT	1 cut(s)	278
SchI	GAGTC	3 cut(s)	1016, 1349, 1871
ScrFI	CCNGG	3 cut(s)	296, 343, 628
SduI	GDGCHC	2 cut(s)	56, 158
SfaNI	GCATC	5 cut(s)	736, 1223, 1273, 1436, 1633
SfcI	CTRYAG	3 cut(s)	366, 748, 1695
Sfr303I	CCGCGG	1 cut(s)	1915
SgrBI	CCGCGG	1 cut(s)	1915
SmiMI	CAYNNNNRTG	1 cut(s)	1296
Sse9I	AATT	8 cut(s)	359, 606, 722, 812, 1205, 1407, 1634, 1653
SseBI	AGGCCT	1 cut(s)	372
SsiI	CCGC	9 cut(s)	28, 80, 288, 299, 419, 869, 1194, 1912, 1914
SspI	AATATT	1 cut(s)	676
SspMI	CTAG	7 cut(s)	828, 894, 1161, 1191, 1238, 1275, 1352
StuI	AGGCCT	1 cut(s)	372
StyD4I	CCNGG	3 cut(s)	294, 341, 626
StyI	CCWWGG	3 cut(s)	1146, 1647, 1743
TaaI	ACNGT	9 cut(s)	11, 281, 337, 445, 462, 537, 883, 1132, 1233
TaiI	ACGT	3 cut(s)	177, 766, 1787
TaqII	GACCGA	1 cut(s)	263
TasI	AATT	8 cut(s)	359, 606, 722, 812, 1205, 1407, 1634, 1653
TatI	WGTACW	5 cut(s)	276, 537, 1332, 1704, 1737
TauI	GCSGC	2 cut(s)	291, 1917
TfiI	GAWTC	8 cut(s)	258, 824, 998, 1037, 1058, 1223, 1472, 1836
Tru1I	TTAA	1 cut(s)	413
Tru9I	TTAA	1 cut(s)	413
TscAI	CASTG	7 cut(s)	121, 156, 465, 540, 864, 1236, 1729
TseFI	GTSAC	4 cut(s)	11, 281, 622, 848
TseI	GCWGC	4 cut(s)	365, 1413, 1490, 1628
Tsp45I	GTSAC	4 cut(s)	11, 281, 622, 848
TspDTI	ATGAA	6 cut(s)	392, 591, 1064, 1485, 1527, 1558
TspGWI	ACGGA	2 cut(s)	809, 1794
TspRI	CASTG	7 cut(s)	121, 156, 465, 540, 864, 1236, 1729
Van91I	CCANNNNNTGG	2 cut(s)	644, 1618
XagI	CCTNNNNNAGG	1 cut(s)	233
XapI	RAATTY	2 cut(s)	812, 1407
XbaI	TCTAGA	1 cut(s)	1351
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1619
XmiI	GTMKAC	1 cut(s)	1698
XspI	CTAG	7 cut(s)	828, 894, 1161, 1191, 1238, 1275, 1352
ZrmI	AGTACT	1 cut(s)	278
Zsp2I	ATGCAT	1 cut(s)	930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.