Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006310

Physical Location & Seq

Genomic Coordinates Forward (+)

14384673 .. 14389102

Gene Structure 4430 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027726

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGATGGTCTCGGCGGCCCATCAAACACCAGCAAGTCCCGGTTGATCGGAGACTACATACTGGGCCCGAAAGTTGGGTCGGGTTCGTTCGCCGTCGTGTGGCGCTCGACCCATCGCCAACTGGGTATTGAAGTTGCGGTGAAGGAGATTGACAAGAAACACTTGAGCCCAAAAGTCAGCGAGAGTTTACTTAAGGAAATTTCGATTCTTAGCACCATAAACCATCCCAATATTATTCACCTTTTTGAGGCCATCCAGACCAAGGAAAGAATTTACCTTGTGCTGGAGTACTGTGATGGTGGTGACTTGGCGGCTTATATACAGCGCCATGGGAAAGTTTCGGAAACTGTGGCCAGGCACTTCATGAGGCAATTGGCTGCAGGATTGCAAGTGCTTCAGGAAAAGCACCTCATCCACCGGGATTTAAAACCACAGAACTTGCTTTTGTCAGCCAATGAGGAAACCCCACTATTGAAGATAGGGGACTTTGGTTTTGCAAGATCTGTCACACCCCAAGACTTGGCTGACACACTTTGCGGTTCACCATTATATATGGCTCCAGAGATTATTCTGAACCAAAAATATGATGCAAAGGCTGATTTATGGAGTGTTGGAGCAATTTTATATCAGCTGGTGACTGGGAAGCTACCATTTGATGGGAATAGTCAATTTCAGCTTTTTCATAATATTCTGACATCTACTGAGCTGCGGTTTCCACAAGGTGCTTTGGAAGAATTGCATCCAGATTGTGTAGATCTCTGCAGAAGCCTTTTGCGTCTAAATCCAGTTGAGCGACTGTCGTTTCAGGAGTTCTTCAATCACAAGTTTCTCGGAGAAGTGAGGGTGATGGTGGAAGTTGAACACACTTTACCACTTAAATCAACGGATGAACAGCCTAGTTCTTCGGGCTCCAATACGATGTTGCAATTGCATGCCAGGCATCCCATCAACTCCTCTATCGGGAATCTGAGTTCAGATTCAGCTGCACATATTAAAGGTCTTGTGCCAGATTTTTCATGTGATAGGCCGAGGAAATCTGTTAATCAAGATCCAAACTTACAGGATCAGCTTCGAGTTTCGGATTCAATGGAGTCCATTGAAAAAGATTACGTAATGGTTAATTCTCATTTTGCATCGATGGAGAGTTTCTCCTATTACCTTGAACACTCCCTGCAACTTGATTCCACAACTAGAGCTTCTATCTGTGCTTCAAAGCAGAAAGATCATGGTATACCACGTGTCATCAAAATAGAGGAGCTGGCAGCTGGGTCTGTTGGTGTTGGAAGTTCACAAACTCAAGGATCAGCAATAGTACCAGCATCTTGTGCATCGACTCTGTTACTGGAAGTGCAAGGACTATCTATATTGCATCCTTCGACCAGACTCCATCTGTTACATCAGCATGCTCAGGTCCTTGCTGATCTTTCTCAGGAAAAGTACAATGCAGGACTGTATCTAGAGTCATTTTCAGTTGAACTGGTTGTTTTGGCCATATGGAAGAAAGCTCTTCAAATTTGCAGCAGTTGGCTGGCATCAATTGAAAAGGATGAACCCGAAAGCAGTTCAGCAAATGCATCCTCAGTTGTTCAGGGTGGCTTGTCACTAAACAATTCAGAACATGTAGACTTTACTAGGCCTTCATCTGTTTCAGTTTGGGCCGAGCAAGGTTTCCTAGTTGCATTTGAACGCGCAGAGAAGTTATCCTATCATGTCCAAGATATGGATGGTTCTGCTGAAGTACCAGATGCCATGGAAATTATATTCCAAAAAGCTCTAGACGTTGGGACAAAAGCCGCTGTTGACGAGTATATGGAGAACAAGGGTAGTGCAGCAGCACTGTACACCAAAGCTATGCTTCTGCTCTCTTTTATTGCAGGAGAAGCAACCTCTCTGCCCCTAAACCCTCCATTTTACTTGGCTCCGGCTGATAAGAAGCGAGTCCAACAATACATGGTCAACTTGGAGTCCCATCGGATTAAGTTTCTCAAACCAGATCCCAGTCCTGTTCAAGTTAAAGACTCCATTACTAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005776 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0061919

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04139 ko04140 ko04150 ko04212 map04136 map04138 map04139 map04140 map04150 map04212

Pfam Domains

Protein Families

Pkinase

Protein Analysis

678

Amino Acids

74.73

Weight (kDa)

5.88

Isoelectric Point (pI)

44.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	21 - 277	1.9e-72	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	23 - 271	1.4e-45	Protein tyrosine and serine/threonine kinase
MIT_ATG1	PF24497	446 - 572	1.6e-45	ATG1, MIT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61960 AT3G61960
fragaria_vesca	FvH4_7g17860 FvH4_7g17860 FvH4_7g17860 FvH4_7g17860 FvH4_7g17860
malus_domestica	MD01G1091000.v1.1 MD07G1161200.v1.1
prunus_persica	Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1 Prupe.2G200500_v2.0.a1
pyrus_communis	pycom01g11510
rosa_chinensis	RchiOBHm_Chr1g0361311
rosa_laevigata	RLG00000027726
rosa_multiflora	Rmu_sc0002119.1_g000030
rosa_roxburghii	Rroxscaffold_4G00295060
rosa_rugosa	Rorug01G0288200
rosa_samantha	Rh1AG299400 Rh1BG263200 Rh1CG280700 Rh1DG293300 Rh4BG414700
rosa_wichuraiana	Rw1G026490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	520, 656, 1720
AccI	GTMKAC	2 cut(s)	1231, 1623
AccII	CGCG	1 cut(s)	1689
AciI	CCGC	6 cut(s)	15, 137, 311, 537, 709, 1794
AclWI	GGATC	4 cut(s)	1043, 1071, 1309, 1988
AcoI	YGGCCR	2 cut(s)	351, 1488
AcsI	RAATTY	3 cut(s)	198, 270, 1512
AcuI	CTGAAG	2 cut(s)	380, 1755
AcvI	CACGTG	1 cut(s)	1238
AdeI	CACNNNGTG	1 cut(s)	722
AfaI	GTAC	5 cut(s)	290, 1314, 1439, 1740, 1841
AfiI	CCNNNNNNNGG	9 cut(s)	74, 99, 247, 262, 283, 520, 656, 960, 1720
AflII	CTTAAG	1 cut(s)	191
AflIII	ACRYGT	2 cut(s)	1237, 1618
AjnI	CCWGG	2 cut(s)	353, 935
AloI	GAACNNNNNNTCC	2 cut(s)	955, 987
Alw26I	GTCTC	2 cut(s)	14, 45
AlwI	GGATC	4 cut(s)	1043, 1071, 1309, 1988
AoxI	GGCC	8 cut(s)	16, 64, 249, 351, 1025, 1488, 1634, 1656
ApaI	GGGCCC	1 cut(s)	68
ApeKI	GCWGC	7 cut(s)	377, 706, 983, 1262, 1518, 1829, 1832
ApoI	RAATTY	3 cut(s)	198, 270, 1512
ArsI	GACNNNNNNTTYG	4 cut(s)	62, 94, 476, 508
AspLEI	GCGC	3 cut(s)	105, 327, 1691
AspS9I	GGNCC	5 cut(s)	17, 64, 65, 1411, 1656
AsuC2I	CCSGG	2 cut(s)	40, 419
AsuHPI	GGTGA	6 cut(s)	151, 230, 314, 534, 646, 856
AvaII	GGWCC	1 cut(s)	1411
BaeGI	GKGCMC	1 cut(s)	68
BalI	TGGCCA	2 cut(s)	353, 1490
BanII	GRGCYC	3 cut(s)	68, 170, 911
BbrPI	CACGTG	1 cut(s)	1238
BbvI	GCAGC	7 cut(s)	364, 693, 970, 1274, 1530, 1841, 1844
BceAI	ACGGC	1 cut(s)	77
BciT130I	CCWGG	2 cut(s)	355, 937
BcnI	CCSGG	2 cut(s)	40, 419
BcoDI	GTCTC	2 cut(s)	14, 45
BfaI	CTAG	6 cut(s)	897, 1191, 1457, 1632, 1673, 1775
BfmI	CTRYAG	2 cut(s)	378, 760
BfoI	RGCGCY	2 cut(s)	106, 328
BfrI	CTTAAG	1 cut(s)	191
BglII	AGATCT	2 cut(s)	500, 754
BmcAI	AGTACT	1 cut(s)	290
Bme1390I	CCNGG	4 cut(s)	40, 355, 419, 937
Bme18I	GGWCC	1 cut(s)	1411
BmgT120I	GGNCC	5 cut(s)	17, 64, 65, 1411, 1656
BmiI	GGNNCC	4 cut(s)	66, 558, 910, 1920
BmrFI	CCNGG	4 cut(s)	40, 355, 419, 937
BmrI	ACTGGG	4 cut(s)	71, 131, 648, 1992
BmuI	ACTGGG	4 cut(s)	71, 131, 648, 1992
BplI	GAGNNNNNCTC	2 cut(s)	1133, 1165
BpmI	CTGGAG	2 cut(s)	305, 543
Bpu10I	CCTNAGC	1 cut(s)	1407
BpuEI	CTTGAG	2 cut(s)	184, 1281
BpuMI	CCSGG	2 cut(s)	40, 419
Bsa29I	ATCGAT	1 cut(s)	1136
BsaAI	YACGTR	2 cut(s)	1111, 1238
BsaI	GGTCTC	1 cut(s)	14
BsaJI	CCNNGG	4 cut(s)	261, 328, 1028, 1749
Bsc4I	CCNNNNNNNGG	9 cut(s)	74, 99, 247, 262, 283, 520, 656, 960, 1720
Bse1I	ACTGG	7 cut(s)	66, 126, 643, 785, 1347, 1482, 1998
BseBI	CCWGG	2 cut(s)	355, 937
BseCI	ATCGAT	1 cut(s)	1136
BseDI	CCNNGG	4 cut(s)	261, 328, 1028, 1749
BseLI	CCNNNNNNNGG	9 cut(s)	74, 99, 247, 262, 283, 520, 656, 960, 1720
BseMII	CTCAG	5 cut(s)	693, 959, 1421, 1442, 1593
BseNI	ACTGG	7 cut(s)	66, 126, 643, 785, 1347, 1482, 1998
BseRI	GAGGAG	2 cut(s)	943, 1268
BseSI	GKGCMC	1 cut(s)	68
BseXI	GCAGC	7 cut(s)	364, 693, 970, 1274, 1530, 1841, 1844
BseYI	CCCAGC	1 cut(s)	1265
BsgI	GTGCAG	2 cut(s)	969, 1848
Bsh1236I	CGCG	1 cut(s)	1689
BshFI	GGCC	8 cut(s)	18, 66, 251, 353, 1027, 1490, 1636, 1658
BshVI	ATCGAT	1 cut(s)	1136
BsiSI	CCGG	3 cut(s)	40, 418, 1922
BslFI	GGGAC	4 cut(s)	22, 497, 1798, 1951
BslI	CCNNNNNNNGG	9 cut(s)	74, 99, 247, 262, 283, 520, 656, 960, 1720
BsmAI	GTCTC	2 cut(s)	14, 45
BsmFI	GGGAC	4 cut(s)	22, 497, 1798, 1951
BsnI	GGCC	8 cut(s)	18, 66, 251, 353, 1027, 1490, 1636, 1658
Bso31I	GGTCTC	1 cut(s)	14
Bsp120I	GGGCCC	1 cut(s)	64
Bsp1286I	GDGCHC	3 cut(s)	68, 170, 911
Bsp1407I	TGTACA	1 cut(s)	1839
Bsp143I	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
Bsp19I	CCATGG	2 cut(s)	328, 1749
BspACI	CCGC	6 cut(s)	15, 137, 311, 537, 709, 1794
BspANI	GGCC	8 cut(s)	18, 66, 251, 353, 1027, 1490, 1636, 1658
BspCNI	CTCAG	5 cut(s)	694, 960, 1420, 1441, 1592
BspDI	ATCGAT	1 cut(s)	1136
BspFNI	CGCG	1 cut(s)	1689
BspHI	TCATGA	1 cut(s)	363
BspLI	GGNNCC	4 cut(s)	66, 558, 910, 1920
BspMAI	CTGCAG	2 cut(s)	382, 764
BspPI	GGATC	4 cut(s)	1043, 1071, 1309, 1988
BspQI	GCTCTTC	1 cut(s)	1512
BspTI	CTTAAG	1 cut(s)	191
BspTNI	GGTCTC	1 cut(s)	14
BsrGI	TGTACA	1 cut(s)	1839
BsrI	ACTGG	7 cut(s)	66, 126, 643, 785, 1347, 1482, 1998
BssECI	CCNNGG	4 cut(s)	261, 328, 1028, 1749
BssMI	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
BssNAI	GTATAC	1 cut(s)	1232
BssT1I	CCWWGG	3 cut(s)	261, 328, 1749
Bst1107I	GTATAC	1 cut(s)	1232
Bst2UI	CCWGG	2 cut(s)	355, 937
Bst4CI	ACNGT	5 cut(s)	293, 349, 798, 1452, 1839
Bst6I	CTCTTC	1 cut(s)	1512
BstAFI	CTTAAG	1 cut(s)	191
BstAPI	GCANNNNNTGC	1 cut(s)	1325
BstAUI	TGTACA	1 cut(s)	1839
BstBAI	YACGTR	2 cut(s)	1111, 1238
BstC8I	GCNNGC	4 cut(s)	933, 1260, 1404, 1530
BstDEI	CTNAG	7 cut(s)	209, 702, 968, 1407, 1428, 1579, 2028
BstDSI	CCRYGG	2 cut(s)	328, 1749
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstFNI	CGCG	1 cut(s)	1689
BstH2I	RGCGCY	2 cut(s)	106, 328
BstHHI	GCGC	3 cut(s)	105, 327, 1691
BstKTI	GATC	9 cut(s)	48, 503, 757, 1051, 1066, 1225, 1304, 1423, 1996
BstMAI	GTCTC	2 cut(s)	14, 45
BstMBI	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
BstMWI	GCNNNNNNNGC	3 cut(s)	937, 1325, 1880
BstNI	CCWGG	2 cut(s)	355, 937
BstNSI	RCATGY	3 cut(s)	935, 1406, 1622
BstSCI	CCNGG	4 cut(s)	38, 353, 417, 935
BstSFI	CTRYAG	2 cut(s)	378, 760
BstSLI	GKGCMC	1 cut(s)	68
BstSNI	TACGTA	1 cut(s)	1111
BstUI	CGCG	1 cut(s)	1689
BstV1I	GCAGC	7 cut(s)	364, 693, 970, 1274, 1530, 1841, 1844
BstX2I	RGATCY	4 cut(s)	500, 754, 1048, 1993
BstYI	RGATCY	4 cut(s)	500, 754, 1048, 1993
BstZ17I	GTATAC	1 cut(s)	1232
Bsu15I	ATCGAT	1 cut(s)	1136
BsuRI	GGCC	8 cut(s)	18, 66, 251, 353, 1027, 1490, 1636, 1658
BsuTUI	ATCGAT	1 cut(s)	1136
BtgI	CCRYGG	2 cut(s)	328, 1749
BtgZI	GCGATG	1 cut(s)	98
BtsIMutI	CAGTG	1 cut(s)	1835
Cac8I	GCNNGC	4 cut(s)	933, 1260, 1404, 1530
CciI	TCATGA	1 cut(s)	363
CfoI	GCGC	3 cut(s)	105, 327, 1691
Cfr13I	GGNCC	5 cut(s)	17, 64, 65, 1411, 1656
ClaI	ATCGAT	1 cut(s)	1136
CseI	GACGC	1 cut(s)	764
Csp6I	GTAC	5 cut(s)	289, 1313, 1438, 1739, 1840
CspCI	CAANNNNNGTGG	2 cut(s)	420, 455
CviQI	GTAC	5 cut(s)	289, 1313, 1438, 1739, 1840
DdeI	CTNAG	7 cut(s)	209, 702, 968, 1407, 1428, 1579, 2028
DpnI	GATC	9 cut(s)	47, 502, 756, 1050, 1065, 1224, 1303, 1422, 1995
DpnII	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
DraI	TTTAAA	1 cut(s)	426
DraIII	CACNNNGTG	1 cut(s)	722
EaeI	YGGCCR	2 cut(s)	351, 1488
Eam1104I	CTCTTC	1 cut(s)	1512
EarI	CTCTTC	1 cut(s)	1512
Eco105I	TACGTA	1 cut(s)	1111
Eco130I	CCWWGG	3 cut(s)	261, 328, 1749
Eco147I	AGGCCT	1 cut(s)	1636
Eco24I	GRGCYC	3 cut(s)	68, 170, 911
Eco31I	GGTCTC	1 cut(s)	14
Eco47I	GGWCC	1 cut(s)	1411
Eco57I	CTGAAG	2 cut(s)	380, 1755
Eco72I	CACGTG	1 cut(s)	1238
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoO109I	RGGNCCY	1 cut(s)	1411
EcoRII	CCWGG	2 cut(s)	353, 935
EcoT14I	CCWWGG	3 cut(s)	261, 328, 1749
EcoT22I	ATGCAT	1 cut(s)	1576
EcoT38I	GRGCYC	3 cut(s)	68, 170, 911
ErhI	CCWWGG	3 cut(s)	261, 328, 1749
FalI	AAGNNNNNCTT	4 cut(s)	146, 178, 1839, 1871
FaqI	GGGAC	4 cut(s)	22, 497, 1798, 1951
FauNDI	CATATG	1 cut(s)	1493
FblI	GTMKAC	2 cut(s)	1231, 1623
FriOI	GRGCYC	3 cut(s)	68, 170, 911
FspBI	CTAG	6 cut(s)	897, 1191, 1457, 1632, 1673, 1775
GlaI	GCGC	3 cut(s)	104, 326, 1690
GsaI	CCCAGC	1 cut(s)	1269
GsuI	CTGGAG	2 cut(s)	305, 543
HaeII	RGCGCY	2 cut(s)	106, 328
HaeIII	GGCC	8 cut(s)	18, 66, 251, 353, 1027, 1490, 1636, 1658
HapII	CCGG	3 cut(s)	40, 418, 1922
HgaI	GACGC	1 cut(s)	764
HhaI	GCGC	3 cut(s)	105, 327, 1691
Hin6I	GCGC	3 cut(s)	103, 325, 1689
HinP1I	GCGC	3 cut(s)	103, 325, 1689
HincII	GTYRAC	2 cut(s)	1801, 1957
HindII	GTYRAC	2 cut(s)	1801, 1957
HpaII	CCGG	3 cut(s)	40, 418, 1922
HphI	GGTGA	6 cut(s)	151, 230, 314, 534, 646, 856
Hpy166II	GTNNAC	8 cut(s)	188, 542, 1232, 1289, 1624, 1801, 1842, 1957
Hpy8I	GTNNAC	8 cut(s)	188, 542, 1232, 1289, 1624, 1801, 1842, 1957
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	3 cut(s)	136, 1383, 1647
HpyCH4III	ACNGT	5 cut(s)	293, 349, 798, 1452, 1839
HpyCH4IV	ACGT	3 cut(s)	1110, 1237, 1779
HpyF10VI	GCNNNNNNNGC	3 cut(s)	937, 1325, 1880
HpyF3I	CTNAG	7 cut(s)	209, 702, 968, 1407, 1428, 1579, 2028
HpySE526I	ACGT	3 cut(s)	1110, 1237, 1779
HspAI	GCGC	3 cut(s)	103, 325, 1689
Kzo9I	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
LguI	GCTCTTC	1 cut(s)	1512
LmnI	GCTCC	5 cut(s)	562, 614, 914, 1255, 1924
Lsp1109I	GCAGC	7 cut(s)	364, 693, 970, 1274, 1530, 1841, 1844
MaeI	CTAG	6 cut(s)	897, 1191, 1457, 1632, 1673, 1775
MaeII	ACGT	3 cut(s)	1110, 1237, 1779
MaeIII	GTNAC	6 cut(s)	302, 505, 634, 1338, 1392, 1599
MalI	GATC	9 cut(s)	47, 502, 756, 1050, 1065, 1224, 1303, 1422, 1995
MboI	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
MboII	GAAGA	6 cut(s)	487, 743, 805, 894, 1499, 1510
MfeI	CAATTG	3 cut(s)	371, 926, 1536
MflI	RGATCY	4 cut(s)	500, 754, 1048, 1993
MhlI	GDGCHC	3 cut(s)	68, 170, 911
MlsI	TGGCCA	2 cut(s)	353, 1490
MluNI	TGGCCA	2 cut(s)	353, 1490
MlyI	GAGTC	7 cut(s)	1100, 1327, 1377, 1469, 1947, 1973, 2012
MmeI	TCCRAC	3 cut(s)	592, 1261, 1966
Mox20I	TGGCCA	2 cut(s)	353, 1490
Mph1103I	ATGCAT	1 cut(s)	1576
MscI	TGGCCA	2 cut(s)	353, 1490
MseI	TTAA	8 cut(s)	192, 425, 876, 993, 1041, 1119, 1977, 2013
MslI	CAYNNNNRTG	1 cut(s)	1401
Msp20I	TGGCCA	2 cut(s)	353, 1490
MspA1I	CMGCKG	4 cut(s)	631, 983, 1265, 1796
MspCI	CTTAAG	1 cut(s)	191
MspI	CCGG	3 cut(s)	40, 418, 1922
MspR9I	CCNGG	4 cut(s)	40, 355, 419, 937
MunI	CAATTG	3 cut(s)	371, 926, 1536
MvaI	CCWGG	2 cut(s)	355, 937
MvnI	CGCG	1 cut(s)	1689
MwoI	GCNNNNNNNGC	3 cut(s)	937, 1325, 1880
NciI	CCSGG	2 cut(s)	40, 419
NcoI	CCATGG	2 cut(s)	328, 1749
NdeI	CATATG	1 cut(s)	1493
NdeII	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
NlaIV	GGNNCC	4 cut(s)	66, 558, 910, 1920
NmeAIII	GCCGAG	2 cut(s)	1053, 1684
NmuCI	GTSAC	4 cut(s)	302, 505, 634, 1599
NsiI	ATGCAT	1 cut(s)	1576
NspI	RCATGY	3 cut(s)	935, 1406, 1622
PaeI	GCATGC	2 cut(s)	935, 1406
PagI	TCATGA	1 cut(s)	363
PceI	AGGCCT	1 cut(s)	1636
PciI	ACATGT	1 cut(s)	1618
PciSI	GCTCTTC	1 cut(s)	1512
PfeI	GAWTC	5 cut(s)	205, 964, 977, 1082, 1181
PflMI	CCANNNNNTGG	3 cut(s)	520, 656, 1720
PleI	GAGTC	7 cut(s)	1099, 1327, 1377, 1468, 1946, 1972, 2012
PmaCI	CACGTG	1 cut(s)	1238
PmlI	CACGTG	1 cut(s)	1238
PpsI	GAGTC	7 cut(s)	1099, 1327, 1377, 1468, 1946, 1972, 2012
Ppu21I	YACGTR	2 cut(s)	1111, 1238
PpuMI	RGGWCCY	1 cut(s)	1411
PscI	ACATGT	1 cut(s)	1618
Psp5II	RGGWCCY	1 cut(s)	1411
Psp6I	CCWGG	2 cut(s)	353, 935
PspCI	CACGTG	1 cut(s)	1238
PspFI	CCCAGC	1 cut(s)	1265
PspGI	CCWGG	2 cut(s)	353, 935
PspN4I	GGNNCC	4 cut(s)	66, 558, 910, 1920
PspOMI	GGGCCC	1 cut(s)	64
PspPI	GGNCC	5 cut(s)	17, 64, 65, 1411, 1656
PspPPI	RGGWCCY	1 cut(s)	1411
PsrI	GAACNNNNNNTAC	2 cut(s)	852, 884
PstI	CTGCAG	2 cut(s)	382, 764
PsuI	RGATCY	4 cut(s)	500, 754, 1048, 1993
PvuII	CAGCTG	3 cut(s)	631, 983, 1265
RsaI	GTAC	5 cut(s)	290, 1314, 1439, 1740, 1841
RsaNI	GTAC	5 cut(s)	289, 1313, 1438, 1739, 1840
RseI	CAYNNNNRTG	1 cut(s)	1401
SapI	GCTCTTC	1 cut(s)	1512
SaqAI	TTAA	8 cut(s)	192, 425, 876, 993, 1041, 1119, 1977, 2013
Sau3AI	GATC	9 cut(s)	45, 500, 754, 1048, 1063, 1222, 1301, 1420, 1993
Sau96I	GGNCC	5 cut(s)	17, 64, 65, 1411, 1656
ScaI	AGTACT	1 cut(s)	290
SchI	GAGTC	7 cut(s)	1100, 1327, 1377, 1469, 1947, 1973, 2012
ScrFI	CCNGG	4 cut(s)	40, 355, 419, 937
SduI	GDGCHC	3 cut(s)	68, 170, 911
SfcI	CTRYAG	2 cut(s)	378, 760
SinI	GGWCC	1 cut(s)	1411
SmiMI	CAYNNNNRTG	1 cut(s)	1401
SmlI	CTYRAG	3 cut(s)	163, 191, 1296
SmoI	CTYRAG	3 cut(s)	163, 191, 1296
SnaBI	TACGTA	1 cut(s)	1111
SphI	GCATGC	2 cut(s)	935, 1406
SseBI	AGGCCT	1 cut(s)	1636
SsiI	CCGC	6 cut(s)	15, 137, 311, 537, 709, 1794
SspI	AATATT	2 cut(s)	232, 688
SspMI	CTAG	6 cut(s)	897, 1191, 1457, 1632, 1673, 1775
StuI	AGGCCT	1 cut(s)	1636
StyD4I	CCNGG	4 cut(s)	38, 353, 417, 935
StyI	CCWWGG	3 cut(s)	261, 328, 1749
TaaI	ACNGT	5 cut(s)	293, 349, 798, 1452, 1839
TaiI	ACGT	3 cut(s)	1113, 1240, 1782
TaqI	TCGA	6 cut(s)	107, 203, 1072, 1136, 1331, 1376
TatI	WGTACW	3 cut(s)	288, 1437, 1839
TauI	GCSGC	3 cut(s)	18, 314, 1796
TfiI	GAWTC	5 cut(s)	205, 964, 977, 1082, 1181
Tru1I	TTAA	8 cut(s)	192, 425, 876, 993, 1041, 1119, 1977, 2013
Tru9I	TTAA	8 cut(s)	192, 425, 876, 993, 1041, 1119, 1977, 2013
TscAI	CASTG	1 cut(s)	1842
TseFI	GTSAC	4 cut(s)	302, 505, 634, 1599
TseI	GCWGC	7 cut(s)	377, 706, 983, 1262, 1518, 1829, 1832
Tsp45I	GTSAC	4 cut(s)	302, 505, 634, 1599
TspDTI	ATGAA	6 cut(s)	352, 671, 903, 1005, 1563, 1629
TspGWI	ACGGA	1 cut(s)	899
TspRI	CASTG	1 cut(s)	1842
Van91I	CCANNNNNTGG	3 cut(s)	520, 656, 1720
Vha464I	CTTAAG	1 cut(s)	191
VpaK11BI	GGWCC	1 cut(s)	1411
XagI	CCTNNNNNAGG	1 cut(s)	245
XapI	RAATTY	3 cut(s)	198, 270, 1512
XbaI	TCTAGA	2 cut(s)	1456, 1774
XceI	RCATGY	3 cut(s)	935, 1406, 1622
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1721
XmiI	GTMKAC	2 cut(s)	1231, 1623
XspI	CTAG	6 cut(s)	897, 1191, 1457, 1632, 1673, 1775
ZrmI	AGTACT	1 cut(s)	290
Zsp2I	ATGCAT	1 cut(s)	1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.