Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0010017

Physical Location & Seq

Genomic Coordinates Reverse (-)

13575806 .. 13579555

Gene Structure 3750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g12980.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGCCACAGCTATACGCCTACGCCGGCTCGGAGCCGCCGCCGTCGTTGCCACCGCAGCCAGCGGCGCCTTTCTTCTCCAGCCTTCGTTCTCCGCCAGCGACCGTGGCGCCGGGCCCTCCTCTCTCGGCGCTGTCCGCCAGAAGATCAGCGACCCGAACGCTGTCGTCCCGTCCAGGGCGGCTCAGGAGGCCGCTCTGATTGGCGCGAGTGCTGCCAACCCGCTCGACATTCTCGTGATTGGCGGTGGCGCCACCGGCTGCGGCGTCGCCCTTGACGCAACCACCAGAGGCCTCCGCGTCGGCCTCGTCGAGCGCGAGGACTTCTCTTCTGGAACGTCGTCGCGGTCCACTAAGCTAATTCATGGAGGTGTTCGGTACTTGGAGAAAGCTGTTTTCAATCTTGACTACGGGCAGCTGAAGTTGGTATTTCATGCGCTTGAGGAGCGTAAACAGGTTATTGACAATGCACCGCACCTCTGCCATGCTTTGCCATGCATGACACCATGTTTTGACTGGTTTGAGGTAGTATACTACTGGATGGGCTTGAAAATGTATGATTTGGTTGCAGCACTACGGCTCTTACATGTGTCCAGATATTATTCTGCACAAGAATCTGTTGAGCTCTTCCCCACCCTTGCCAGGAAGGGTAACAATAAAAGCTTGAAGGGCACTGTGGTGTATTATGATGGGCAGATGAATGACGCGCGTCTTAATGTTGGATTGGCATGCACTGCTGCCTTAGCTGGTGCAGCGGTGCTTAACCATGCAGAAGTGGTTGATTTGTTGAGGGATGAGGCTAGCAATCGGACAATTGGTGCAAGAATCCGAGACAACTTATCAGGGAAAGAGTTTGATACATATGCAAAAGTCGTTGTGAATGCTGCTGGGCCATTTTGTGACTCTTTAAGGAAGATGGCAGATCAAGATGCAAAACCAATGATATGCCCAAGCAGCGGTGTACACATCGTACTTCCCGACTATTACTCTCCTGAGGGTATGGGTTTGATTGTTCCTAAAACTAAGGATGGACGTGTTGTTTTCATGCTTCCATGGTTGGGACGAACAATTGCTGGCACCACAGATTCCAACACCCCTATTACTCTGCTTCCTGAACCACATGAGGATGAGATTCAATTCATATTGGATGCTATTTGTGATTACCTTAATGTCAAGGTACGCCGCACGGATGTTCTCTCTGCGTGGAGTGGTATTCGCCCATTGGCAACGGATCCATCTGTGAAAAGCACTGAGAGCATCTCCAGAGATCATGTTGTATGTGAAGATTATCCTGGTTTGGTAACAATCACGGGCGGCAAGTGGACCACTTACCGTGGCATGGCAGAAGATGCGGTTAATGCAGCAATAAAGTCTGGAAAGCTGACCCCAGAAAATGGATGTTTAACCTCCAAGCTGCAAATTGTCGGTGGAGACGGGTGGGATCCTGCATCTTTTACAGTTATCGCTCAACAATATGTGCGCATGAAGAACAGCCATGGTAAAGTTGTTCCTGGAGTGATGGACACTGCTGCAGCAAAGCATCTATCCCATGCATATGGTACTTTGGCTGAACGAGTTGCTGCTATTGCTCAGAACGAAAATCTGGGGAAGAGGCTTGCCCATGGATACCCTTTTCTAGAGGCGGAGGTTGCCTACTGTGCTCGAAACGAGTACTGTGAATCTGCCATTGATTTCCTTGCTCGGAGATCTCGGCTTGCTTTCCTCGACACTGATGCGGCAAGCAGGGCATTGCCTCGTGTGATTGAAATTTTAGCGACCGAACACAACTGGGATGATTTGAGGCAGAAGTACGAGTTAGAGAAGGCCAAGGAATTTTTGAAAACTTTCAAATCTTCAAAAAATGCTCAGTTCCATGACGGGAAACATGTTTATCGGTTTGTGCATTCATTTTTCACAGGTACATTGACTGGCGGCAAATTTTCCGGCCTTAATTCTGGTGCAAAGGAGTTTGCCTGCCACACACAGCATAGGGTTATAGTTACACATCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004368 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0006066 GO:0006071 GO:0006072 GO:0006091 GO:0006116 GO:0006127 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009117 GO:0009987 GO:0015980 GO:0016052 GO:0016491 GO:0016614 GO:0016901 GO:0019362 GO:0019400 GO:0019405 GO:0019563 GO:0019637 GO:0019674 GO:0019751 GO:0022900 GO:0022904 GO:0034308 GO:0034641 GO:0042180 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044262 GO:0044275 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046164 GO:0046174 GO:0046483 GO:0046496 GO:0051186 GO:0052646 GO:0055086 GO:0055114 GO:0071704 GO:0072524 GO:1901135 GO:1901360 GO:1901564 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

ko00564 ko01110 map00564 map01110

Pfam Domains

Protein Families

DAO DAO_C

Protein Analysis

670

Amino Acids

72.7

Weight (kDa)

8.28

Isoelectric Point (pI)

34.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10370
fragaria_vesca	FvH4_7g18820 FvH4_7g18820 FvH4_7g18820 FvH4_7g18820 FvH4_7g18820
malus_domestica	MD01G1103300.v1.1 MD07G1170100.v1.1 MD07G1170200.v1.1
prunus_persica	Prupe.2G209000_v2.0.a1
pyrus_communis	pycom01g12980
rosa_chinensis	RchiOBHm_Chr1g0362611
rosa_laevigata	RLG00000027634
rosa_multiflora	Rmu_sc0005725.1_g000012
rosa_roxburghii	Rroxscaffold_4G00293900
rosa_rugosa	Rorug01G0300100.1
rosa_samantha	Rh1AG308700 Rh1BG272400 Rh1CG289600 Rh1DG302800
rosa_wichuraiana	Rw1G027420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1478
AccB1I	GGYRCC	4 cut(s)	65, 107, 248, 1073
AccB7I	CCANNNNNTGG	1 cut(s)	1391
AccBSI	CCGCTC	2 cut(s)	194, 223
AccI	GTMKAC	1 cut(s)	528
AccII	CGCG	6 cut(s)	206, 297, 315, 343, 704, 706
AclWI	GGATC	4 cut(s)	1223, 1236, 1433, 1446
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	1764, 1829, 1934
AcuI	CTGAAG	1 cut(s)	437
AcyI	GRCGYC	4 cut(s)	66, 108, 249, 264
AfaI	GTAC	8 cut(s)	377, 960, 969, 1176, 1558, 1670, 1808, 1918
AfiI	CCNNNNNNNGG	6 cut(s)	175, 639, 953, 1055, 1336, 1391
AflIII	ACRYGT	3 cut(s)	583, 1030, 1882
AgsI	TTSAA	8 cut(s)	397, 547, 664, 1133, 1763, 1837, 1846, 1854
AjiI	CACGTC	1 cut(s)	1031
AjnI	CCWGG	4 cut(s)	173, 638, 1288, 1507
AleI	CACNNNNGTG	1 cut(s)	674
AluBI	AGCT	9 cut(s)	11, 355, 389, 415, 622, 660, 743, 1378, 1411
AluI	AGCT	9 cut(s)	11, 355, 389, 415, 622, 660, 743, 1378, 1411
Alw21I	GWGCWC	2 cut(s)	624, 1660
Alw26I	GTCTC	2 cut(s)	822, 1422
AlwI	GGATC	4 cut(s)	1223, 1236, 1433, 1446
AoxI	GGCC	8 cut(s)	3, 113, 189, 289, 301, 887, 1821, 1942
ApaI	GGGCCC	1 cut(s)	117
ApoI	RAATTY	3 cut(s)	1764, 1829, 1934
Asp700I	GAANNNNTTC	1 cut(s)	1841
AspLEI	GCGC	9 cut(s)	68, 110, 131, 206, 251, 315, 436, 706, 1479
AspS9I	GGNCC	5 cut(s)	113, 114, 345, 887, 1320
AsuC2I	CCSGG	1 cut(s)	112
AsuNHI	GCTAGC	1 cut(s)	797
AvaII	GGWCC	2 cut(s)	345, 1320
AxyI	CCTNAGG	1 cut(s)	990
BaeGI	GKGCMC	2 cut(s)	117, 671
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	2 cut(s)	1228, 1438
BanI	GGYRCC	4 cut(s)	65, 107, 248, 1073
BanII	GRGCYC	2 cut(s)	117, 624
BauI	CACGAG	2 cut(s)	233, 1752
Bbv12I	GWGCWC	2 cut(s)	624, 1660
BccI	CCATC	6 cut(s)	532, 680, 907, 1019, 1240, 1510
BceAI	ACGGC	2 cut(s)	26, 590
BcgI	CGANNNNNNTGC	2 cut(s)	1712, 1746
BciT130I	CCWGG	4 cut(s)	175, 640, 1290, 1509
BciVI	GTATCC	1 cut(s)	1616
BcnI	CCSGG	1 cut(s)	112
BcoDI	GTCTC	2 cut(s)	822, 1422
BfaI	CTAG	2 cut(s)	798, 1634
BfmI	CTRYAG	1 cut(s)	1527
BfoI	RGCGCY	4 cut(s)	69, 111, 132, 252
BfuI	GTATCC	1 cut(s)	1616
BglII	AGATCT	1 cut(s)	1703
BmcAI	AGTACT	1 cut(s)	1670
Bme1390I	CCNGG	5 cut(s)	112, 175, 640, 1290, 1509
Bme18I	GGWCC	2 cut(s)	345, 1320
BmgBI	CACGTC	1 cut(s)	1031
BmgT120I	GGNCC	5 cut(s)	113, 114, 345, 887, 1320
BmiI	GGNNCC	8 cut(s)	34, 67, 109, 115, 250, 1075, 1230, 1440
BmrFI	CCNGG	5 cut(s)	112, 175, 640, 1290, 1509
BmrI	ACTGGG	1 cut(s)	1795
BmsI	GCATC	7 cut(s)	916, 1135, 1263, 1336, 1454, 1546, 1720
BmtI	GCTAGC	1 cut(s)	801
BmuI	ACTGGG	1 cut(s)	1795
BoxI	GACNNNNGTC	1 cut(s)	705
BplI	GAGNNNNNCTC	4 cut(s)	308, 340, 1241, 1273
BpmI	CTGGAG	3 cut(s)	62, 1243, 1530
Bpu10I	CCTNAGC	2 cut(s)	183, 739
BpuEI	CTTGAG	1 cut(s)	458
BpuMI	CCSGG	1 cut(s)	112
BsaHI	GRCGYC	4 cut(s)	66, 108, 249, 264
BsaJI	CCNNGG	7 cut(s)	103, 174, 1049, 1330, 1492, 1618, 1824
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 639, 953, 1055, 1336, 1391
Bse118I	RCCGGY	2 cut(s)	24, 254
Bse1I	ACTGG	4 cut(s)	518, 539, 1790, 1930
Bse21I	CCTNAGG	1 cut(s)	990
Bse3DI	GCAATG	1 cut(s)	1745
BseBI	CCWGG	4 cut(s)	175, 640, 1290, 1509
BseDI	CCNNGG	7 cut(s)	103, 174, 1049, 1330, 1492, 1618, 1824
BseGI	GGATG	8 cut(s)	543, 796, 1030, 1129, 1150, 1192, 1400, 1795
BseLI	CCNNNNNNNGG	6 cut(s)	175, 639, 953, 1055, 1336, 1391
BseMI	GCAATG	1 cut(s)	1745
BseMII	CTCAG	5 cut(s)	197, 981, 1239, 1601, 1877
BseNI	ACTGG	4 cut(s)	518, 539, 1790, 1930
BseRI	GAGGAG	2 cut(s)	109, 455
BseSI	GKGCMC	2 cut(s)	117, 671
BseYI	CCCAGC	1 cut(s)	884
BsgI	GTGCAG	2 cut(s)	588, 768
Bsh1236I	CGCG	6 cut(s)	206, 297, 315, 343, 704, 706
Bsh1285I	CGRYCG	2 cut(s)	103, 1776
BshFI	GGCC	8 cut(s)	5, 115, 191, 291, 303, 889, 1823, 1944
BshNI	GGYRCC	4 cut(s)	65, 107, 248, 1073
BsiEI	CGRYCG	2 cut(s)	103, 1776
BsiHKAI	GWGCWC	2 cut(s)	624, 1660
BsiSI	CCGG	4 cut(s)	25, 111, 255, 1941
BslFI	GGGAC	2 cut(s)	152, 1071
BslI	CCNNNNNNNGG	6 cut(s)	175, 639, 953, 1055, 1336, 1391
BsmAI	GTCTC	2 cut(s)	822, 1422
BsmBI	CGTCTC	1 cut(s)	1422
BsmFI	GGGAC	2 cut(s)	152, 1071
BsmI	GAATGC	2 cut(s)	883, 1900
BsnI	GGCC	8 cut(s)	5, 115, 191, 291, 303, 889, 1823, 1944
Bsp120I	GGGCCC	1 cut(s)	113
Bsp1286I	GDGCHC	4 cut(s)	117, 624, 671, 1660
Bsp1407I	TGTACA	1 cut(s)	958
Bsp143I	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
Bsp19I	CCATGG	3 cut(s)	1049, 1492, 1618
BspANI	GGCC	8 cut(s)	5, 115, 191, 291, 303, 889, 1823, 1944
BspCNI	CTCAG	5 cut(s)	196, 982, 1240, 1600, 1876
BspFNI	CGCG	6 cut(s)	206, 297, 315, 343, 704, 706
BspLI	GGNNCC	8 cut(s)	34, 67, 109, 115, 250, 1075, 1230, 1440
BspMAI	CTGCAG	1 cut(s)	1531
BspOI	GCTAGC	1 cut(s)	801
BspPI	GGATC	4 cut(s)	1223, 1236, 1433, 1446
BspQI	GCTCTTC	1 cut(s)	629
BspT107I	GGYRCC	4 cut(s)	65, 107, 248, 1073
BsrBI	CCGCTC	2 cut(s)	194, 223
BsrDI	GCAATG	1 cut(s)	1745
BsrFI	RCCGGY	2 cut(s)	24, 254
BsrGI	TGTACA	1 cut(s)	958
BsrI	ACTGG	4 cut(s)	518, 539, 1790, 1930
BssAI	RCCGGY	2 cut(s)	24, 254
BssECI	CCNNGG	7 cut(s)	103, 174, 1049, 1330, 1492, 1618, 1824
BssMI	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
BssNAI	GTATAC	1 cut(s)	529
BssNI	GRCGYC	4 cut(s)	66, 108, 249, 264
BssSI	CACGAG	2 cut(s)	233, 1752
BssT1I	CCWWGG	4 cut(s)	1049, 1492, 1618, 1824
Bst1107I	GTATAC	1 cut(s)	529
Bst2BI	CACGAG	2 cut(s)	233, 1752
Bst2UI	CCWGG	4 cut(s)	175, 640, 1290, 1509
Bst4CI	ACNGT	6 cut(s)	104, 673, 1331, 1456, 1655, 1673
Bst6I	CTCTTC	3 cut(s)	331, 629, 1601
BstACI	GRCGYC	4 cut(s)	66, 108, 249, 264
BstAPI	GCANNNNNTGC	2 cut(s)	731, 1346
BstAUI	TGTACA	1 cut(s)	958
BstDEI	CTNAG	8 cut(s)	183, 351, 739, 990, 1020, 1248, 1587, 1863
BstDSI	CCRYGG	5 cut(s)	103, 1049, 1330, 1492, 1618
BstF5I	GGATG	8 cut(s)	543, 796, 1030, 1129, 1150, 1192, 1400, 1795
BstFNI	CGCG	6 cut(s)	206, 297, 315, 343, 704, 706
BstH2I	RGCGCY	4 cut(s)	69, 111, 132, 252
BstHHI	GCGC	9 cut(s)	68, 110, 131, 206, 251, 315, 436, 706, 1479
BstKTI	GATC	6 cut(s)	147, 922, 1231, 1267, 1441, 1706
BstMAI	GTCTC	2 cut(s)	822, 1422
BstMBI	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
BstMCI	CGRYCG	2 cut(s)	103, 1776
BstNI	CCWGG	4 cut(s)	175, 640, 1290, 1509
BstNSI	RCATGY	3 cut(s)	587, 729, 1886
BstPAI	GACNNNNGTC	1 cut(s)	705
BstSCI	CCNGG	5 cut(s)	110, 173, 638, 1288, 1507
BstSFI	CTRYAG	1 cut(s)	1527
BstSLI	GKGCMC	2 cut(s)	117, 671
BstUI	CGCG	6 cut(s)	206, 297, 315, 343, 704, 706
BstX2I	RGATCY	3 cut(s)	1228, 1438, 1703
BstXI	CCANNNNNNTGG	1 cut(s)	1553
BstYI	RGATCY	3 cut(s)	1228, 1438, 1703
BstZ17I	GTATAC	1 cut(s)	529
Bsu36I	CCTNAGG	1 cut(s)	990
BsuI	GTATCC	1 cut(s)	1616
BsuRI	GGCC	8 cut(s)	5, 115, 191, 291, 303, 889, 1823, 1944
BtgI	CCRYGG	5 cut(s)	103, 1049, 1330, 1492, 1618
BtrI	CACGTC	1 cut(s)	1031
BtsCI	GGATG	8 cut(s)	543, 796, 1030, 1129, 1150, 1192, 1400, 1795
BtsI	GCAGTG	2 cut(s)	729, 1521
BtsIMutI	CAGTG	5 cut(s)	669, 729, 1245, 1521, 1725
CfoI	GCGC	9 cut(s)	68, 110, 131, 206, 251, 315, 436, 706, 1479
Cfr10I	RCCGGY	2 cut(s)	24, 254
Cfr13I	GGNCC	5 cut(s)	113, 114, 345, 887, 1320
CseI	GACGC	5 cut(s)	253, 284, 286, 695, 710
Csp6I	GTAC	8 cut(s)	376, 959, 968, 1175, 1557, 1669, 1807, 1917
CviQI	GTAC	8 cut(s)	376, 959, 968, 1175, 1557, 1669, 1807, 1917
DdeI	CTNAG	8 cut(s)	183, 351, 739, 990, 1020, 1248, 1587, 1863
DinI	GGCGCC	3 cut(s)	67, 109, 250
DpnI	GATC	6 cut(s)	146, 921, 1230, 1266, 1440, 1705
DpnII	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	3 cut(s)	331, 629, 1601
EarI	CTCTTC	3 cut(s)	331, 629, 1601
EciI	GGCGGA	3 cut(s)	82, 125, 1655
Ecl136II	GAGCTC	1 cut(s)	622
Eco130I	CCWWGG	4 cut(s)	1049, 1492, 1618, 1824
Eco147I	AGGCCT	1 cut(s)	291
Eco24I	GRGCYC	2 cut(s)	117, 624
Eco47I	GGWCC	2 cut(s)	345, 1320
Eco53kI	GAGCTC	1 cut(s)	622
Eco57I	CTGAAG	1 cut(s)	437
Eco81I	CCTNAGG	1 cut(s)	990
EcoICRI	GAGCTC	1 cut(s)	622
EcoO109I	RGGNCCY	1 cut(s)	114
EcoRII	CCWGG	4 cut(s)	173, 638, 1288, 1507
EcoT14I	CCWWGG	4 cut(s)	1049, 1492, 1618, 1824
EcoT22I	ATGCAT	2 cut(s)	497, 1552
EcoT38I	GRGCYC	2 cut(s)	117, 624
EgeI	GGCGCC	3 cut(s)	67, 109, 250
EheI	GGCGCC	3 cut(s)	67, 109, 250
ErhI	CCWWGG	4 cut(s)	1049, 1492, 1618, 1824
Esp3I	CGTCTC	1 cut(s)	1422
FaqI	GGGAC	2 cut(s)	152, 1071
FauI	CCCGC	1 cut(s)	228
FauNDI	CATATG	2 cut(s)	859, 1552
FblI	GTMKAC	1 cut(s)	528
FokI	GGATG	8 cut(s)	550, 803, 1037, 1136, 1157, 1199, 1407, 1802
FriOI	GRGCYC	2 cut(s)	117, 624
FspAI	RTGCGCAY	1 cut(s)	1478
FspBI	CTAG	2 cut(s)	798, 1634
FspI	TGCGCA	1 cut(s)	1478
GlaI	GCGC	9 cut(s)	67, 109, 130, 205, 250, 314, 435, 705, 1478
GsaI	CCCAGC	1 cut(s)	888
GsuI	CTGGAG	3 cut(s)	62, 1243, 1530
HaeII	RGCGCY	4 cut(s)	69, 111, 132, 252
HaeIII	GGCC	8 cut(s)	5, 115, 191, 291, 303, 889, 1823, 1944
HapII	CCGG	4 cut(s)	25, 111, 255, 1941
HgaI	GACGC	5 cut(s)	253, 284, 286, 695, 710
HhaI	GCGC	9 cut(s)	68, 110, 131, 206, 251, 315, 436, 706, 1479
Hin1I	GRCGYC	4 cut(s)	66, 108, 249, 264
Hin6I	GCGC	9 cut(s)	66, 108, 129, 204, 249, 313, 434, 704, 1477
HinP1I	GCGC	9 cut(s)	66, 108, 129, 204, 249, 313, 434, 704, 1477
HindIII	AAGCTT	1 cut(s)	658
HinfI	GANTC	6 cut(s)	611, 822, 899, 1082, 1129, 1676
HpaII	CCGG	4 cut(s)	25, 111, 255, 1941
Hpy166II	GTNNAC	6 cut(s)	348, 449, 529, 959, 961, 1320
Hpy188I	TCNGA	6 cut(s)	32, 198, 807, 827, 1590, 1701
Hpy8I	GTNNAC	6 cut(s)	348, 449, 529, 959, 961, 1320
Hpy99I	CGWCG	6 cut(s)	47, 269, 302, 311, 340, 343
HpyAV	CCTTC	4 cut(s)	93, 637, 658, 1813
HpyCH4III	ACNGT	6 cut(s)	104, 673, 1331, 1456, 1655, 1673
HpyCH4IV	ACGT	2 cut(s)	335, 1030
HpyF3I	CTNAG	8 cut(s)	183, 351, 739, 990, 1020, 1248, 1587, 1863
HpySE526I	ACGT	2 cut(s)	335, 1030
Hsp92I	GRCGYC	4 cut(s)	66, 108, 249, 264
HspAI	GCGC	9 cut(s)	66, 108, 129, 204, 249, 313, 434, 704, 1477
KasI	GGCGCC	3 cut(s)	65, 107, 248
KroI	GCCGGC	1 cut(s)	24
KroNI	GCCGGC	1 cut(s)	26
Kzo9I	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
LguI	GCTCTTC	1 cut(s)	629
LmnI	GCTCC	2 cut(s)	32, 442
LweI	GCATC	7 cut(s)	916, 1135, 1263, 1336, 1454, 1546, 1720
MaeI	CTAG	2 cut(s)	798, 1634
MaeII	ACGT	2 cut(s)	335, 1030
MaeIII	GTNAC	4 cut(s)	647, 896, 1297, 1996
MalI	GATC	6 cut(s)	146, 921, 1230, 1266, 1440, 1705
MbiI	CCGCTC	2 cut(s)	194, 223
MboI	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
MfeI	CAATTG	2 cut(s)	810, 1065
MflI	RGATCY	3 cut(s)	1228, 1438, 1703
MhlI	GDGCHC	4 cut(s)	117, 624, 671, 1660
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	357, 810, 1065, 1133, 1416, 1764, 1829, 1934, 1948
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	3 cut(s)	66, 108, 249
MlyI	GAGTC	1 cut(s)	893
MmeI	TCCRAC	2 cut(s)	697, 1110
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	497, 1552
MroNI	GCCGGC	1 cut(s)	24
MroXI	GAANNNNTTC	1 cut(s)	1841
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	711, 759, 905, 1164, 1353, 1400, 1947
MslI	CAYNNNNRTG	6 cut(s)	233, 366, 674, 1122, 1551, 2005
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	4 cut(s)	63, 415, 752, 954
MspI	CCGG	4 cut(s)	25, 111, 255, 1941
MspR9I	CCNGG	5 cut(s)	112, 175, 640, 1290, 1509
MunI	CAATTG	2 cut(s)	810, 1065
Mva1269I	GAATGC	2 cut(s)	883, 1900
MvaI	CCWGG	4 cut(s)	175, 640, 1290, 1509
MvnI	CGCG	6 cut(s)	206, 297, 315, 343, 704, 706
NaeI	GCCGGC	1 cut(s)	26
NarI	GGCGCC	3 cut(s)	66, 108, 249
NciI	CCSGG	1 cut(s)	112
NcoI	CCATGG	3 cut(s)	1049, 1492, 1618
NdeI	CATATG	2 cut(s)	859, 1552
NdeII	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
NgoMIV	GCCGGC	1 cut(s)	24
NheI	GCTAGC	1 cut(s)	797
NlaIV	GGNNCC	8 cut(s)	34, 67, 109, 115, 250, 1075, 1230, 1440
NmeAIII	GCCGAG	2 cut(s)	105, 1687
NmuCI	GTSAC	1 cut(s)	896
NsbI	TGCGCA	1 cut(s)	1478
NsiI	ATGCAT	2 cut(s)	497, 1552
NspI	RCATGY	3 cut(s)	587, 729, 1886
OliI	CACNNNNGTG	1 cut(s)	674
PaeI	GCATGC	1 cut(s)	729
PceI	AGGCCT	1 cut(s)	291
PciI	ACATGT	2 cut(s)	583, 1882
PciSI	GCTCTTC	1 cut(s)	629
PcsI	WCGNNNNNNNCGW	4 cut(s)	231, 306, 312, 972
PctI	GAATGC	2 cut(s)	883, 1900
PdiI	GCCGGC	1 cut(s)	26
PdmI	GAANNNNTTC	1 cut(s)	1841
PfeI	GAWTC	5 cut(s)	611, 822, 1082, 1129, 1676
PflMI	CCANNNNNTGG	1 cut(s)	1391
PfoI	TCCNGGA	1 cut(s)	1507
PleI	GAGTC	1 cut(s)	893
PluTI	GGCGCC	3 cut(s)	69, 111, 252
PpsI	GAGTC	1 cut(s)	893
PscI	ACATGT	2 cut(s)	583, 1882
PshAI	GACNNNNGTC	1 cut(s)	705
Psp124BI	GAGCTC	1 cut(s)	624
Psp6I	CCWGG	4 cut(s)	173, 638, 1288, 1507
PspFI	CCCAGC	1 cut(s)	884
PspGI	CCWGG	4 cut(s)	173, 638, 1288, 1507
PspN4I	GGNNCC	8 cut(s)	34, 67, 109, 115, 250, 1075, 1230, 1440
PspOMI	GGGCCC	1 cut(s)	113
PspPI	GGNCC	5 cut(s)	113, 114, 345, 887, 1320
PstI	CTGCAG	1 cut(s)	1531
PsuI	RGATCY	3 cut(s)	1228, 1438, 1703
PvuII	CAGCTG	1 cut(s)	415
RsaI	GTAC	8 cut(s)	377, 960, 969, 1176, 1558, 1670, 1808, 1918
RsaNI	GTAC	8 cut(s)	376, 959, 968, 1175, 1557, 1669, 1807, 1917
RseI	CAYNNNNRTG	6 cut(s)	233, 366, 674, 1122, 1551, 2005
SacI	GAGCTC	1 cut(s)	624
SapI	GCTCTTC	1 cut(s)	629
SaqAI	TTAA	7 cut(s)	711, 759, 905, 1164, 1353, 1400, 1947
Sau3AI	GATC	6 cut(s)	144, 919, 1228, 1264, 1438, 1703
Sau96I	GGNCC	5 cut(s)	113, 114, 345, 887, 1320
ScaI	AGTACT	1 cut(s)	1670
SchI	GAGTC	1 cut(s)	893
ScrFI	CCNGG	5 cut(s)	112, 175, 640, 1290, 1509
SduI	GDGCHC	4 cut(s)	117, 624, 671, 1660
SfaNI	GCATC	7 cut(s)	916, 1135, 1263, 1336, 1454, 1546, 1720
SfcI	CTRYAG	1 cut(s)	1527
SfoI	GGCGCC	3 cut(s)	67, 109, 250
SinI	GGWCC	2 cut(s)	345, 1320
SmiMI	CAYNNNNRTG	6 cut(s)	233, 366, 674, 1122, 1551, 2005
SmlI	CTYRAG	1 cut(s)	437
SmoI	CTYRAG	1 cut(s)	437
SphI	GCATGC	1 cut(s)	729
Sse9I	AATT	9 cut(s)	357, 810, 1065, 1133, 1416, 1764, 1829, 1934, 1948
SseBI	AGGCCT	1 cut(s)	291
SspDI	GGCGCC	3 cut(s)	65, 107, 248
SspMI	CTAG	2 cut(s)	798, 1634
SstI	GAGCTC	1 cut(s)	624
StuI	AGGCCT	1 cut(s)	291
StyD4I	CCNGG	5 cut(s)	110, 173, 638, 1288, 1507
StyI	CCWWGG	4 cut(s)	1049, 1492, 1618, 1824
TaaI	ACNGT	6 cut(s)	104, 673, 1331, 1456, 1655, 1673
TaiI	ACGT	2 cut(s)	338, 1033
TaqI	TCGA	4 cut(s)	225, 309, 1660, 1722
TaqII	GACCGA	1 cut(s)	1790
TasI	AATT	9 cut(s)	357, 810, 1065, 1133, 1416, 1764, 1829, 1934, 1948
TatI	WGTACW	2 cut(s)	958, 1668
TfiI	GAWTC	5 cut(s)	611, 822, 1082, 1129, 1676
Tru1I	TTAA	7 cut(s)	711, 759, 905, 1164, 1353, 1400, 1947
Tru9I	TTAA	7 cut(s)	711, 759, 905, 1164, 1353, 1400, 1947
TscAI	CASTG	5 cut(s)	676, 736, 1252, 1528, 1732
TseFI	GTSAC	1 cut(s)	896
Tsp45I	GTSAC	1 cut(s)	896
TspDTI	ATGAA	7 cut(s)	350, 419, 710, 1030, 1126, 1496, 1893
TspGWI	ACGGA	2 cut(s)	1199, 1241
TspRI	CASTG	5 cut(s)	676, 736, 1252, 1528, 1732
Van91I	CCANNNNNTGG	1 cut(s)	1391
VpaK11BI	GGWCC	2 cut(s)	345, 1320
XapI	RAATTY	3 cut(s)	1764, 1829, 1934
XbaI	TCTAGA	1 cut(s)	1633
XceI	RCATGY	3 cut(s)	587, 729, 1886
XcmI	CCANNNNNNNNNTGG	1 cut(s)	510
XmiI	GTMKAC	1 cut(s)	528
XmnI	GAANNNNTTC	1 cut(s)	1841
XspI	CTAG	2 cut(s)	798, 1634
ZrmI	AGTACT	1 cut(s)	1670
Zsp2I	ATGCAT	2 cut(s)	497, 1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.