pycom02g10630

Armadillo beta-catenin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0022372
Physical Location & Seq
Forward (+)
7375866 .. 7376971
1106 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10630.1

Sequence Viewer

Length: 909 bp
ATGAAGAACTCTTATGCTCACATCATCATCAAGATCATCAACCATTTCAACATCATGTGTTTCGTGCCCCACGTTGGGAAAAAAAAAGCTCTCCTTGCTGACACGGGTAATTCGTTCCAAGTTCGATCAGAAGCAGCAGCTACACTTGGTGAGATTTCTCGGCACGATTGCAAACATAGCATCATTGAAGAAGGGGGAGTTGAACCCTTGTTGAAATTCGTGGGAGAGGGTCCAATCGAAGGCCAAGAGAATGCCGTCCGGACTCTGGGGTCACTCGTACATGCCTGGGAAAGCGTTGAACACGTGATCCTTGCTGATATATGCAAATTGTGGGCAAAAATCCTCCGAGAAGGTCCGATGAAAGTTCAGGCTGCTGTGGCATGGGCAGTGTCAGAGATCGCAGCTAGACAACCCAAATGCCGCGATGTTTTCGTACAGCATGATGTGGTCTACTGGCTCTTGAGCCATCTACAAAACAATAGTATTGTCAATGGCAATGAAGACCCTGCCACCAAGGCTGAAATGAAAGCTATGGCGACCAGAGCCCTTGCCAAACTAGCCAAAGGGAACTCAGCCATTCTTCCTAGCATCGCAGAATCAAGTGTCCTCCTAATTTTAGCTGTGAACCTAGAAAAGGGTACCAAAGATGTTCAACTGCAATCTACCGAAGCATTAATGGAGATCATTGCAGTTGCTGAGGAGGATGCTGAACTGAGAACATCTGCCTTGTATCGTAATTCTCCAGCTCGGAAATCTATCGTTGATCAATTAGTAATAAAGATCACCGATGAGAAGGAAGATCCGGAGCTCCTGATCCCGTCCATTAAAGCTGTTGGGAATTTAGCAACAACATTTGAAGCAACAGACACAAGGATGATTGTTGACACTCTTCTGCGACTTTTACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

303

Amino Acids

33.13

Weight (kDa)

6.08

Isoelectric Point (pI)

33.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022372)

Species Orthologous Gene IDs
malus_domestica MD00G1176000.v1.1 MD02G1110300.v1.1 MD02G1135200.v1.1
pyrus_communis pycom02g10630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 268
Acc65I GGTACC 1 cut(s) 638
AccB1I GGYRCC 1 cut(s) 638
AccI GTMKAC 1 cut(s) 450
AccII CGCG 1 cut(s) 423
AccIII TCCGGA 2 cut(s) 258, 802
AciI CCGC 1 cut(s) 421
AclWI GGATC 3 cut(s) 301, 794, 808
AcsI RAATTY 2 cut(s) 215, 838
AcvI CACGTG 1 cut(s) 304
AdeI CACNNNGTG 1 cut(s) 149
AfaI GTAC 3 cut(s) 279, 435, 640
AfiI CCNNNNNNNGG 5 cut(s) 74, 75, 239, 265, 634
AflIII ACRYGT 1 cut(s) 301
AgsI TTSAA 7 cut(s) 49, 188, 203, 214, 299, 653, 857
AjnI CCWGG 1 cut(s) 284
AloI GAACNNNNNNTCC 2 cut(s) 291, 323
AluBI AGCT 8 cut(s) 89, 140, 404, 530, 620, 746, 808, 830
AluI AGCT 8 cut(s) 89, 140, 404, 530, 620, 746, 808, 830
Alw21I GWGCWC 1 cut(s) 810
AlwI GGATC 3 cut(s) 301, 794, 808
AlwNI CAGNNNCTG 1 cut(s) 695
Aor13HI TCCGGA 2 cut(s) 258, 802
AoxI GGCC 1 cut(s) 241
ApeKI GCWGC 4 cut(s) 134, 137, 371, 401
ApoI RAATTY 2 cut(s) 215, 838
AseI ATTAAT 1 cut(s) 674
Asp718I GGTACC 1 cut(s) 638
AspS9I GGNCC 2 cut(s) 230, 353
AsuHPI GGTGA 2 cut(s) 161, 775
AvaII GGWCC 2 cut(s) 230, 353
BaeGI GKGCMC 1 cut(s) 69
BanI GGYRCC 1 cut(s) 638
BanII GRGCYC 2 cut(s) 547, 810
BbrPI CACGTG 1 cut(s) 304
BbsI GAAGAC 1 cut(s) 507
Bbv12I GWGCWC 1 cut(s) 810
BbvCI CCTCAGC 1 cut(s) 696
BbvI GCAGC 4 cut(s) 146, 149, 358, 413
BccI CCATC 1 cut(s) 474
BceAI ACGGC 1 cut(s) 239
BciT130I CCWGG 1 cut(s) 286
BclI TGATCA 1 cut(s) 763
BfaI CTAG 4 cut(s) 405, 557, 585, 629
BglI GCCNNNNNGGC 1 cut(s) 515
BisI GCNGC 5 cut(s) 135, 138, 372, 402, 421
BlsI GCNGC 5 cut(s) 136, 139, 373, 403, 422
Bme1390I CCNGG 1 cut(s) 286
Bme18I GGWCC 2 cut(s) 230, 353
BmgT120I GGNCC 2 cut(s) 230, 353
BmiI GGNNCC 2 cut(s) 231, 640
BmrFI CCNGG 1 cut(s) 286
BmsI GCATC 3 cut(s) 189, 597, 694
BpiI GAAGAC 1 cut(s) 507
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 696
BpuEI CTTGAG 1 cut(s) 481
BsaAI YACGTR 1 cut(s) 304
BsaJI CCNNGG 2 cut(s) 285, 513
BsaWI WCCGGW 2 cut(s) 258, 802
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 75, 239, 265, 634
Bse1I ACTGG 1 cut(s) 458
Bse3DI GCAATG 2 cut(s) 502, 684
BseAI TCCGGA 2 cut(s) 258, 802
BseBI CCWGG 1 cut(s) 286
BseDI CCNNGG 2 cut(s) 285, 513
BseGI GGATG 2 cut(s) 709, 879
BseLI CCNNNNNNNGG 5 cut(s) 74, 75, 239, 265, 634
BseMI GCAATG 2 cut(s) 502, 684
BseMII CTCAG 3 cut(s) 585, 687, 704
BseNI ACTGG 1 cut(s) 458
BseRI GAGGAG 1 cut(s) 713
BseSI GKGCMC 1 cut(s) 69
BseXI GCAGC 4 cut(s) 146, 149, 358, 413
Bsh1236I CGCG 1 cut(s) 423
BshFI GGCC 1 cut(s) 243
BshNI GGYRCC 1 cut(s) 638
BsiHKAI GWGCWC 1 cut(s) 810
BsiSI CCGG 2 cut(s) 259, 803
BslI CCNNNNNNNGG 5 cut(s) 74, 75, 239, 265, 634
BsmI GAATGC 1 cut(s) 256
BsnI GGCC 1 cut(s) 243
Bsp1286I GDGCHC 3 cut(s) 69, 547, 810
Bsp13I TCCGGA 2 cut(s) 258, 802
Bsp143I GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
BspACI CCGC 1 cut(s) 421
BspANI GGCC 1 cut(s) 243
BspCNI CTCAG 3 cut(s) 584, 688, 705
BspEI TCCGGA 2 cut(s) 258, 802
BspFNI CGCG 1 cut(s) 423
BspLI GGNNCC 2 cut(s) 231, 640
BspPI GGATC 3 cut(s) 301, 794, 808
BspT107I GGYRCC 1 cut(s) 638
BsrDI GCAATG 2 cut(s) 502, 684
BsrI ACTGG 1 cut(s) 458
BssECI CCNNGG 2 cut(s) 285, 513
BssMI GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
BssT1I CCWWGG 1 cut(s) 513
Bst2UI CCWGG 1 cut(s) 286
Bst6I CTCTTC 1 cut(s) 894
BstBAI YACGTR 1 cut(s) 304
BstDEI CTNAG 3 cut(s) 571, 696, 713
BstENI CCTNNNNNAGG 1 cut(s) 632
BstF5I GGATG 2 cut(s) 709, 879
BstFNI CGCG 1 cut(s) 423
BstKTI GATC 9 cut(s) 36, 128, 309, 399, 684, 766, 783, 802, 816
BstMBI GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
BstMWI GCNNNNNNNGC 6 cut(s) 95, 177, 377, 515, 542, 557
BstNI CCWGG 1 cut(s) 286
BstNSI RCATGY 1 cut(s) 284
BstSCI CCNGG 1 cut(s) 284
BstSLI GKGCMC 1 cut(s) 69
BstUI CGCG 1 cut(s) 423
BstV1I GCAGC 4 cut(s) 146, 149, 358, 413
BstV2I GAAGAC 1 cut(s) 507
BstX2I RGATCY 1 cut(s) 799
BstYI RGATCY 1 cut(s) 799
BsuRI GGCC 1 cut(s) 243
BtgZI GCGATG 2 cut(s) 438, 574
BtsCI GGATG 2 cut(s) 709, 879
BtsI GCAGTG 1 cut(s) 393
BtsIMutI CAGTG 1 cut(s) 393
CaiI CAGNNNCTG 1 cut(s) 695
Cfr13I GGNCC 2 cut(s) 230, 353
Csp6I GTAC 3 cut(s) 278, 434, 639
CviAII CATG 4 cut(s) 55, 281, 381, 440
CviQI GTAC 3 cut(s) 278, 434, 639
DdeI CTNAG 3 cut(s) 571, 696, 713
DpnI GATC 9 cut(s) 35, 127, 308, 398, 683, 765, 782, 801, 815
DpnII GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
DraIII CACNNNGTG 1 cut(s) 149
DrdI GACNNNNNNGTC 1 cut(s) 268
DseDI GACNNNNNNGTC 1 cut(s) 268
Eam1104I CTCTTC 1 cut(s) 894
EarI CTCTTC 1 cut(s) 894
Ecl136II GAGCTC 1 cut(s) 808
Eco130I CCWWGG 1 cut(s) 513
Eco24I GRGCYC 2 cut(s) 547, 810
Eco47I GGWCC 2 cut(s) 230, 353
Eco53kI GAGCTC 1 cut(s) 808
Eco72I CACGTG 1 cut(s) 304
EcoICRI GAGCTC 1 cut(s) 808
EcoNI CCTNNNNNAGG 1 cut(s) 632
EcoRII CCWGG 1 cut(s) 284
EcoT14I CCWWGG 1 cut(s) 513
EcoT38I GRGCYC 2 cut(s) 547, 810
ErhI CCWWGG 1 cut(s) 513
FaeI CATG 4 cut(s) 58, 284, 384, 443
FaiI YATR 9 cut(s) 15, 56, 177, 282, 320, 322, 382, 441, 533
FalI AAGNNNNNCTT 2 cut(s) 78, 110
FatI CATG 4 cut(s) 54, 280, 380, 439
FbaI TGATCA 1 cut(s) 763
FblI GTMKAC 1 cut(s) 450
Fnu4HI GCNGC 5 cut(s) 135, 138, 372, 402, 421
FokI GGATG 2 cut(s) 716, 886
FriOI GRGCYC 2 cut(s) 547, 810
Fsp4HI GCNGC 5 cut(s) 135, 138, 372, 402, 421
FspBI CTAG 4 cut(s) 405, 557, 585, 629
GluI GCNGC 5 cut(s) 135, 138, 372, 402, 421
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 1 cut(s) 243
HapII CCGG 2 cut(s) 259, 803
Hin1II CATG 4 cut(s) 58, 284, 384, 443
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HinfI GANTC 2 cut(s) 262, 596
HpaII CCGG 2 cut(s) 259, 803
HphI GGTGA 2 cut(s) 161, 775
Hpy166II GTNNAC 3 cut(s) 451, 625, 883
Hpy188I TCNGA 5 cut(s) 130, 347, 357, 394, 750
Hpy188III TCNNGA 5 cut(s) 31, 259, 460, 803, 811
Hpy8I GTNNAC 3 cut(s) 451, 625, 883
HpyAV CCTTC 4 cut(s) 185, 233, 344, 787
HpyCH4IV ACGT 2 cut(s) 72, 303
HpyCH4V TGCA 4 cut(s) 171, 324, 658, 689
HpyF10VI GCNNNNNNNGC 6 cut(s) 95, 177, 377, 515, 542, 557
HpyF3I CTNAG 3 cut(s) 571, 696, 713
HpySE526I ACGT 2 cut(s) 72, 303
Hsp92II CATG 4 cut(s) 58, 284, 384, 443
Kpn2I TCCGGA 2 cut(s) 258, 802
KpnI GGTACC 1 cut(s) 642
Ksp22I TGATCA 1 cut(s) 763
Kzo9I GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
LmnI GCTCC 2 cut(s) 805, 813
Lsp1109I GCAGC 4 cut(s) 146, 149, 358, 413
LweI GCATC 3 cut(s) 189, 597, 694
MaeI CTAG 4 cut(s) 405, 557, 585, 629
MaeII ACGT 2 cut(s) 72, 303
MaeIII GTNAC 1 cut(s) 270
MalI GATC 9 cut(s) 35, 127, 308, 398, 683, 765, 782, 801, 815
MboI GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
MboII GAAGA 6 cut(s) 16, 200, 512, 572, 809, 881
MflI RGATCY 1 cut(s) 799
MhlI GDGCHC 3 cut(s) 69, 547, 810
MluCI AATT 7 cut(s) 109, 215, 326, 612, 736, 767, 838
MlyI GAGTC 1 cut(s) 256
MnlI CCTC 5 cut(s) 220, 353, 617, 691, 694
MroI TCCGGA 2 cut(s) 258, 802
MseI TTAA 3 cut(s) 674, 825, 907
MslI CAYNNNNRTG 1 cut(s) 872
MspI CCGG 2 cut(s) 259, 803
MspR9I CCNGG 1 cut(s) 286
Mva1269I GAATGC 1 cut(s) 256
MvaI CCWGG 1 cut(s) 286
MvnI CGCG 1 cut(s) 423
MwoI GCNNNNNNNGC 6 cut(s) 95, 177, 377, 515, 542, 557
NdeII GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
NlaIII CATG 4 cut(s) 58, 284, 384, 443
NlaIV GGNNCC 2 cut(s) 231, 640
NmeAIII GCCGAG 1 cut(s) 139
NmuCI GTSAC 1 cut(s) 270
NspI RCATGY 1 cut(s) 284
PcsI WCGNNNNNNNCGW 2 cut(s) 69, 110
PctI GAATGC 1 cut(s) 256
PfeI GAWTC 1 cut(s) 596
PkrI GCNGC 5 cut(s) 136, 139, 373, 403, 422
PleI GAGTC 1 cut(s) 256
PmaCI CACGTG 1 cut(s) 304
PmlI CACGTG 1 cut(s) 304
PpsI GAGTC 1 cut(s) 256
Ppu21I YACGTR 1 cut(s) 304
PshBI ATTAAT 1 cut(s) 674
Psp124BI GAGCTC 1 cut(s) 810
Psp6I CCWGG 1 cut(s) 284
PspCI CACGTG 1 cut(s) 304
PspGI CCWGG 1 cut(s) 284
PspN4I GGNNCC 2 cut(s) 231, 640
PspPI GGNCC 2 cut(s) 230, 353
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 1 cut(s) 799
RsaI GTAC 3 cut(s) 279, 435, 640
RsaNI GTAC 3 cut(s) 278, 434, 639
RseI CAYNNNNRTG 1 cut(s) 872
SacI GAGCTC 1 cut(s) 810
SaqAI TTAA 3 cut(s) 674, 825, 907
SatI GCNGC 5 cut(s) 135, 138, 372, 402, 421
Sau3AI GATC 9 cut(s) 33, 125, 306, 396, 681, 763, 780, 799, 813
Sau96I GGNCC 2 cut(s) 230, 353
SchI GAGTC 1 cut(s) 256
ScrFI CCNGG 1 cut(s) 286
SduI GDGCHC 3 cut(s) 69, 547, 810
SfaNI GCATC 3 cut(s) 189, 597, 694
SinI GGWCC 2 cut(s) 230, 353
SmiMI CAYNNNNRTG 1 cut(s) 872
SmlI CTYRAG 1 cut(s) 460
SmoI CTYRAG 1 cut(s) 460
Sse9I AATT 7 cut(s) 109, 215, 326, 612, 736, 767, 838
SsiI CCGC 1 cut(s) 421
SspMI CTAG 4 cut(s) 405, 557, 585, 629
SstI GAGCTC 1 cut(s) 810
StyD4I CCNGG 1 cut(s) 284
StyI CCWWGG 1 cut(s) 513
TaiI ACGT 2 cut(s) 75, 306
TaqI TCGA 2 cut(s) 124, 237
TasI AATT 7 cut(s) 109, 215, 326, 612, 736, 767, 838
TauI GCSGC 1 cut(s) 423
TfiI GAWTC 1 cut(s) 596
Tru1I TTAA 3 cut(s) 674, 825, 907
Tru9I TTAA 3 cut(s) 674, 825, 907
TscAI CASTG 1 cut(s) 393
TseFI GTSAC 1 cut(s) 270
TseI GCWGC 4 cut(s) 134, 137, 371, 401
Tsp45I GTSAC 1 cut(s) 270
TspDTI ATGAA 4 cut(s) 17, 374, 513, 539
TspRI CASTG 1 cut(s) 393
VpaK11BI GGWCC 2 cut(s) 230, 353
VspI ATTAAT 1 cut(s) 674
XagI CCTNNNNNAGG 1 cut(s) 632
XapI RAATTY 2 cut(s) 215, 838
XceI RCATGY 1 cut(s) 284
XmiI GTMKAC 1 cut(s) 450
XspI CTAG 4 cut(s) 405, 557, 585, 629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.