pycom02g16800

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
14042618 .. 14042874
257 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g16800.2

Sequence Viewer

Length: 216 bp
ATGTTTATTAGACTTACTAATGATGTGGTATGTCGAACGGCTTTTGAGAGGAAGTGCAATGGTGGAGAAGTTACTGGGAATAATCAATATCGGGGACTATATATCCCGTGGCTTTCTTGGTTGAGCCATTTCAATGGTTTGGAGGCCAAGATAGACAAGGTGACTAAGCAGTTTGATGACTTTCTAGTTCAAAGACTGGATATCATGACGAATTGA

Protein Analysis

72

Amino Acids

8.33

Weight (kDa)

7.8

Isoelectric Point (pI)

-8.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021255)

Species Orthologous Gene IDs
pyrus_communis pycom02g16800
rosa_chinensis RchiOBHm_Chr7g0197321
rosa_multiflora Rmu_co8291927.1_g000001
rosa_samantha Rh7BG166300 Rh7DG165600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 133, 191
AoxI GGCC 1 cut(s) 144
AsuHPI GGTGA 1 cut(s) 172
BceAI ACGGC 1 cut(s) 54
BfaI CTAG 1 cut(s) 185
BmrI ACTGGG 1 cut(s) 84
BmuI ACTGGG 1 cut(s) 84
BsaJI CCNNGG 1 cut(s) 107
Bse1I ACTGG 2 cut(s) 79, 201
Bse3DI GCAATG 1 cut(s) 64
BseDI CCNNGG 1 cut(s) 107
BseMI GCAATG 1 cut(s) 64
BseNI ACTGG 2 cut(s) 79, 201
BshFI GGCC 1 cut(s) 146
BslFI GGGAC 1 cut(s) 108
BsmFI GGGAC 1 cut(s) 108
BsnI GGCC 1 cut(s) 146
BspANI GGCC 1 cut(s) 146
BspHI TCATGA 1 cut(s) 204
BsrDI GCAATG 1 cut(s) 64
BsrI ACTGG 2 cut(s) 79, 201
BssECI CCNNGG 1 cut(s) 107
BstDEI CTNAG 1 cut(s) 165
BstDSI CCRYGG 1 cut(s) 107
BstXI CCANNNNNNTGG 1 cut(s) 134
BsuRI GGCC 1 cut(s) 146
BtgI CCRYGG 1 cut(s) 107
CciI TCATGA 1 cut(s) 204
CviAII CATG 1 cut(s) 205
CviJI RGCY 4 cut(s) 41, 112, 126, 146
CviKI_1 RGCY 4 cut(s) 41, 112, 126, 146
DdeI CTNAG 1 cut(s) 165
Eco32I GATATC 1 cut(s) 202
EcoRV GATATC 1 cut(s) 202
FaeI CATG 1 cut(s) 208
FaiI YATR 4 cut(s) 31, 100, 102, 206
FaqI GGGAC 1 cut(s) 108
FatI CATG 1 cut(s) 204
FspBI CTAG 1 cut(s) 185
HaeIII GGCC 1 cut(s) 146
Hin1II CATG 1 cut(s) 208
HphI GGTGA 1 cut(s) 172
Hpy188III TCNNGA 1 cut(s) 205
HpyCH4V TGCA 1 cut(s) 57
HpyF3I CTNAG 1 cut(s) 165
Hsp92II CATG 1 cut(s) 208
LpnPI CCDG 2 cut(s) 60, 182
MaeI CTAG 1 cut(s) 185
MaeIII GTNAC 2 cut(s) 70, 160
MluCI AATT 1 cut(s) 211
MnlI CCTC 2 cut(s) 42, 136
MslI CAYNNNNRTG 1 cut(s) 132
NlaIII CATG 1 cut(s) 208
NmuCI GTSAC 1 cut(s) 160
PagI TCATGA 1 cut(s) 204
RseI CAYNNNNRTG 1 cut(s) 132
SetI ASST 1 cut(s) 162
SgeI CNNG 9 cut(s) 87, 104, 118, 120, 129, 160, 169, 197, 209
SmiMI CAYNNNNRTG 1 cut(s) 132
Sse9I AATT 1 cut(s) 211
SspMI CTAG 1 cut(s) 185
TaqI TCGA 1 cut(s) 34
TasI AATT 1 cut(s) 211
TseFI GTSAC 1 cut(s) 160
Tsp45I GTSAC 1 cut(s) 160
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.