Rh7DG165600

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
14828550 .. 14828855
306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG165600.1

Sequence Viewer

Length: 306 bp
ATGATCAACAAGATAGAGCAATCCGCAGGATCATTGGTGAATTTATCCAAAATGATTTTGAGGCTTACTACTGATACAATTTGTATAATTGCTCTGAGGAGGAAGTATAACAGTGAATCTCCAGACGGGAAGATGATCGAGGAGCTTTTGAAAGAGTTCAATTGGTTAATGGGATGCCCCAATATTGGTGATGTGATCCCATGGCTTGCTTGGTTAAGCCATTTTAATGGTTTCAACGCTAAACTAGACAAGGTTGCTAAACAGTTGGATGACTTTTTGGATGCATGGAGTGGTTCAGGAGCATGA

Protein Analysis

101

Amino Acids

11.36

Weight (kDa)

5.72

Isoelectric Point (pI)

55.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021255)

Species Orthologous Gene IDs
pyrus_communis pycom02g16800
rosa_chinensis RchiOBHm_Chr7g0197321
rosa_multiflora Rmu_co8291927.1_g000001
rosa_samantha Rh7BG166300 Rh7DG165600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 24
AclWI GGATC 2 cut(s) 37, 190
AcsI RAATTY 1 cut(s) 40
AfiI CCNNNNNNNGG 1 cut(s) 185
AgsI TTSAA 3 cut(s) 151, 160, 235
AluBI AGCT 1 cut(s) 145
AluI AGCT 1 cut(s) 145
AlwI GGATC 2 cut(s) 37, 190
ApoI RAATTY 1 cut(s) 40
Asp700I GAANNNNTTC 1 cut(s) 155
AsuHPI GGTGA 2 cut(s) 49, 200
BclI TGATCA 1 cut(s) 3
BfaI CTAG 1 cut(s) 245
BmsI GCATC 2 cut(s) 164, 271
BpmI CTGGAG 1 cut(s) 105
BsaJI CCNNGG 1 cut(s) 200
Bsc4I CCNNNNNNNGG 1 cut(s) 185
BseDI CCNNGG 1 cut(s) 200
BseGI GGATG 3 cut(s) 179, 274, 286
BseLI CCNNNNNNNGG 1 cut(s) 185
BseMII CTCAG 1 cut(s) 86
BseRI GAGGAG 2 cut(s) 112, 155
BslI CCNNNNNNNGG 1 cut(s) 185
Bsp143I GATC 4 cut(s) 3, 29, 135, 195
Bsp19I CCATGG 1 cut(s) 200
BspACI CCGC 1 cut(s) 24
BspCNI CTCAG 1 cut(s) 87
BspPI GGATC 2 cut(s) 37, 190
BssECI CCNNGG 1 cut(s) 200
BssMI GATC 4 cut(s) 3, 29, 135, 195
BssT1I CCWWGG 1 cut(s) 200
Bst4CI ACNGT 2 cut(s) 113, 264
BstC8I GCNNGC 1 cut(s) 207
BstDEI CTNAG 1 cut(s) 95
BstDSI CCRYGG 1 cut(s) 200
BstF5I GGATG 3 cut(s) 179, 274, 286
BstKTI GATC 4 cut(s) 6, 32, 138, 198
BstMBI GATC 4 cut(s) 3, 29, 135, 195
BstXI CCANNNNNNTGG 1 cut(s) 227
BtgI CCRYGG 1 cut(s) 200
BtsCI GGATG 3 cut(s) 179, 274, 286
BtsIMutI CAGTG 1 cut(s) 118
Cac8I GCNNGC 1 cut(s) 207
CviAII CATG 3 cut(s) 201, 285, 303
CviJI RGCY 4 cut(s) 64, 145, 205, 219
CviKI_1 RGCY 4 cut(s) 64, 145, 205, 219
DdeI CTNAG 1 cut(s) 95
DpnI GATC 4 cut(s) 5, 31, 137, 197
DpnII GATC 4 cut(s) 3, 29, 135, 195
Eco130I CCWWGG 1 cut(s) 200
EcoT14I CCWWGG 1 cut(s) 200
EcoT22I ATGCAT 1 cut(s) 286
ErhI CCWWGG 1 cut(s) 200
FaeI CATG 3 cut(s) 204, 288, 306
FaiI YATR 5 cut(s) 86, 108, 202, 286, 304
FatI CATG 3 cut(s) 200, 284, 302
FbaI TGATCA 1 cut(s) 3
FokI GGATG 3 cut(s) 186, 281, 293
FspBI CTAG 1 cut(s) 245
GsuI CTGGAG 1 cut(s) 105
Hin1II CATG 3 cut(s) 204, 288, 306
HinfI GANTC 1 cut(s) 116
HphI GGTGA 2 cut(s) 49, 200
Hpy188I TCNGA 1 cut(s) 96
Hpy188III TCNNGA 2 cut(s) 122, 297
HpyCH4III ACNGT 2 cut(s) 113, 264
HpyCH4V TGCA 1 cut(s) 284
HpyF3I CTNAG 1 cut(s) 95
Hsp92II CATG 3 cut(s) 204, 288, 306
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 4 cut(s) 3, 29, 135, 195
LmnI GCTCC 2 cut(s) 142, 299
LpnPI CCDG 3 cut(s) 12, 135, 282
LweI GCATC 2 cut(s) 164, 271
MaeI CTAG 1 cut(s) 245
MalI GATC 4 cut(s) 5, 31, 137, 197
MboI GATC 4 cut(s) 3, 29, 135, 195
MboII GAAGA 1 cut(s) 142
MfeI CAATTG 1 cut(s) 160
MluCI AATT 4 cut(s) 40, 78, 87, 160
MmeI TCCRAC 1 cut(s) 246
MnlI CCTC 4 cut(s) 54, 90, 93, 133
Mph1103I ATGCAT 1 cut(s) 286
MroXI GAANNNNTTC 1 cut(s) 155
MseI TTAA 3 cut(s) 167, 215, 225
MslI CAYNNNNRTG 1 cut(s) 225
MunI CAATTG 1 cut(s) 160
NcoI CCATGG 1 cut(s) 200
NdeII GATC 4 cut(s) 3, 29, 135, 195
NlaIII CATG 3 cut(s) 204, 288, 306
NsiI ATGCAT 1 cut(s) 286
PdmI GAANNNNTTC 1 cut(s) 155
PfeI GAWTC 1 cut(s) 116
RseI CAYNNNNRTG 1 cut(s) 225
SaqAI TTAA 3 cut(s) 167, 215, 225
Sau3AI GATC 4 cut(s) 3, 29, 135, 195
SetI ASST 2 cut(s) 147, 255
SfaNI GCATC 2 cut(s) 164, 271
SmiMI CAYNNNNRTG 1 cut(s) 225
Sse9I AATT 4 cut(s) 40, 78, 87, 160
SsiI CCGC 1 cut(s) 24
SspI AATATT 1 cut(s) 184
SspMI CTAG 1 cut(s) 245
StyI CCWWGG 1 cut(s) 200
TaaI ACNGT 2 cut(s) 113, 264
TaqI TCGA 1 cut(s) 138
TasI AATT 4 cut(s) 40, 78, 87, 160
TfiI GAWTC 1 cut(s) 116
Tru1I TTAA 3 cut(s) 167, 215, 225
Tru9I TTAA 3 cut(s) 167, 215, 225
TscAI CASTG 1 cut(s) 118
TspRI CASTG 1 cut(s) 118
XapI RAATTY 1 cut(s) 40
XcmI CCANNNNNNNNNTGG 1 cut(s) 207
XmnI GAANNNNTTC 1 cut(s) 155
XspI CTAG 1 cut(s) 245
Zsp2I ATGCAT 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.