U3 small nucleolar RNA-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1224900.v1.1 MD09G1267900.v1.1 |
| pyrus_communis | pycom02g20610 pycom14g20070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 5 |
| AciI | CCGC | 3 cut(s) | 89, 105, 215 |
| AcoI | YGGCCR | 1 cut(s) | 96 |
| AcsI | RAATTY | 1 cut(s) | 79 |
| AgsI | TTSAA | 1 cut(s) | 200 |
| AluBI | AGCT | 1 cut(s) | 389 |
| AluI | AGCT | 1 cut(s) | 389 |
| Ama87I | CYCGRG | 1 cut(s) | 146 |
| AoxI | GGCC | 1 cut(s) | 96 |
| ApeKI | GCWGC | 3 cut(s) | 151, 389, 392 |
| ApoI | RAATTY | 1 cut(s) | 79 |
| AspLEI | GCGC | 1 cut(s) | 259 |
| AsuHPI | GGTGA | 1 cut(s) | 421 |
| AvaI | CYCGRG | 1 cut(s) | 146 |
| BalI | TGGCCA | 1 cut(s) | 98 |
| BanII | GRGCYC | 1 cut(s) | 35 |
| BbsI | GAAGAC | 1 cut(s) | 114 |
| BbvI | GCAGC | 3 cut(s) | 163, 376, 379 |
| BccI | CCATC | 2 cut(s) | 220, 236 |
| BciVI | GTATCC | 1 cut(s) | 197 |
| BfaI | CTAG | 1 cut(s) | 239 |
| BfuI | GTATCC | 1 cut(s) | 197 |
| BisI | GCNGC | 3 cut(s) | 152, 390, 393 |
| BlsI | GCNGC | 3 cut(s) | 153, 391, 394 |
| BmeT110I | CYCGRG | 1 cut(s) | 146 |
| BmiI | GGNNCC | 1 cut(s) | 34 |
| BpiI | GAAGAC | 1 cut(s) | 114 |
| BsaJI | CCNNGG | 1 cut(s) | 396 |
| Bse1I | ACTGG | 1 cut(s) | 13 |
| BseDI | CCNNGG | 1 cut(s) | 396 |
| BseMII | CTCAG | 1 cut(s) | 393 |
| BseNI | ACTGG | 1 cut(s) | 13 |
| BseXI | GCAGC | 3 cut(s) | 163, 376, 379 |
| BsgI | GTGCAG | 2 cut(s) | 345, 366 |
| BshFI | GGCC | 1 cut(s) | 98 |
| BsiHKCI | CYCGRG | 1 cut(s) | 146 |
| BsnI | GGCC | 1 cut(s) | 98 |
| BsoBI | CYCGRG | 1 cut(s) | 146 |
| Bsp1286I | GDGCHC | 1 cut(s) | 35 |
| BspACI | CCGC | 3 cut(s) | 89, 105, 215 |
| BspANI | GGCC | 1 cut(s) | 98 |
| BspCNI | CTCAG | 1 cut(s) | 394 |
| BspLI | GGNNCC | 1 cut(s) | 34 |
| BsrI | ACTGG | 1 cut(s) | 13 |
| BssECI | CCNNGG | 1 cut(s) | 396 |
| BssNAI | GTATAC | 1 cut(s) | 6 |
| BssT1I | CCWWGG | 1 cut(s) | 396 |
| Bst1107I | GTATAC | 1 cut(s) | 6 |
| Bst4CI | ACNGT | 1 cut(s) | 54 |
| Bst6I | CTCTTC | 1 cut(s) | 64 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 389 |
| BstC8I | GCNNGC | 1 cut(s) | 261 |
| BstDEI | CTNAG | 3 cut(s) | 161, 317, 402 |
| BstHHI | GCGC | 1 cut(s) | 259 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 104, 389, 398 |
| BstV1I | GCAGC | 3 cut(s) | 163, 376, 379 |
| BstV2I | GAAGAC | 1 cut(s) | 114 |
| BstZ17I | GTATAC | 1 cut(s) | 6 |
| BsuI | GTATCC | 1 cut(s) | 197 |
| BsuRI | GGCC | 1 cut(s) | 98 |
| Cac8I | GCNNGC | 1 cut(s) | 261 |
| CfoI | GCGC | 1 cut(s) | 259 |
| CviJI | RGCY | 5 cut(s) | 33, 98, 332, 389, 401 |
| CviKI_1 | RGCY | 5 cut(s) | 33, 98, 332, 389, 401 |
| DdeI | CTNAG | 3 cut(s) | 161, 317, 402 |
| EaeI | YGGCCR | 1 cut(s) | 96 |
| Eam1104I | CTCTTC | 1 cut(s) | 64 |
| EarI | CTCTTC | 1 cut(s) | 64 |
| Eco130I | CCWWGG | 1 cut(s) | 396 |
| Eco24I | GRGCYC | 1 cut(s) | 35 |
| Eco88I | CYCGRG | 1 cut(s) | 146 |
| EcoT14I | CCWWGG | 1 cut(s) | 396 |
| EcoT38I | GRGCYC | 1 cut(s) | 35 |
| ErhI | CCWWGG | 1 cut(s) | 396 |
| FaiI | YATR | 5 cut(s) | 6, 24, 174, 370, 372 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| Fnu4HI | GCNGC | 3 cut(s) | 152, 390, 393 |
| FriOI | GRGCYC | 1 cut(s) | 35 |
| Fsp4HI | GCNGC | 3 cut(s) | 152, 390, 393 |
| FspBI | CTAG | 1 cut(s) | 239 |
| GlaI | GCGC | 1 cut(s) | 258 |
| GluI | GCNGC | 3 cut(s) | 152, 390, 393 |
| HaeIII | GGCC | 1 cut(s) | 98 |
| HhaI | GCGC | 1 cut(s) | 259 |
| Hin6I | GCGC | 1 cut(s) | 257 |
| HinP1I | GCGC | 1 cut(s) | 257 |
| HincII | GTYRAC | 1 cut(s) | 347 |
| HindII | GTYRAC | 1 cut(s) | 347 |
| HphI | GGTGA | 1 cut(s) | 421 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 347 |
| Hpy188I | TCNGA | 2 cut(s) | 37, 286 |
| Hpy188III | TCNNGA | 4 cut(s) | 75, 84, 111, 146 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 347 |
| Hpy99I | CGWCG | 1 cut(s) | 76 |
| HpyAV | CCTTC | 3 cut(s) | 194, 271, 400 |
| HpyCH4III | ACNGT | 1 cut(s) | 54 |
| HpyCH4V | TGCA | 3 cut(s) | 263, 326, 383 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 104, 389, 398 |
| HpyF3I | CTNAG | 3 cut(s) | 161, 317, 402 |
| HspAI | GCGC | 1 cut(s) | 257 |
| LmnI | GCTCC | 1 cut(s) | 38 |
| LpnPI | CCDG | 5 cut(s) | 48, 97, 168, 257, 273 |
| Lsp1109I | GCAGC | 3 cut(s) | 163, 376, 379 |
| MaeI | CTAG | 1 cut(s) | 239 |
| MboII | GAAGA | 4 cut(s) | 51, 114, 319, 374 |
| MhlI | GDGCHC | 1 cut(s) | 35 |
| MlsI | TGGCCA | 1 cut(s) | 98 |
| MluCI | AATT | 4 cut(s) | 79, 219, 334, 365 |
| MluNI | TGGCCA | 1 cut(s) | 98 |
| MnlI | CCTC | 5 cut(s) | 141, 147, 153, 314, 334 |
| Mox20I | TGGCCA | 1 cut(s) | 98 |
| MscI | TGGCCA | 1 cut(s) | 98 |
| MseI | TTAA | 2 cut(s) | 222, 424 |
| Msp20I | TGGCCA | 1 cut(s) | 98 |
| MspA1I | CMGCKG | 1 cut(s) | 91 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 104, 389, 398 |
| NlaIV | GGNNCC | 1 cut(s) | 34 |
| PaeR7I | CTCGAG | 1 cut(s) | 146 |
| PkrI | GCNGC | 3 cut(s) | 153, 391, 394 |
| PspN4I | GGNNCC | 1 cut(s) | 34 |
| SaqAI | TTAA | 2 cut(s) | 222, 424 |
| SatI | GCNGC | 3 cut(s) | 152, 390, 393 |
| SduI | GDGCHC | 1 cut(s) | 35 |
| SetI | ASST | 4 cut(s) | 282, 325, 391, 411 |
| Sfr274I | CTCGAG | 1 cut(s) | 146 |
| SlaI | CTCGAG | 1 cut(s) | 146 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| Sse9I | AATT | 4 cut(s) | 79, 219, 334, 365 |
| SsiI | CCGC | 3 cut(s) | 89, 105, 215 |
| SspMI | CTAG | 1 cut(s) | 239 |
| StyI | CCWWGG | 1 cut(s) | 396 |
| TaaI | ACNGT | 1 cut(s) | 54 |
| TaqI | TCGA | 2 cut(s) | 112, 147 |
| TasI | AATT | 4 cut(s) | 79, 219, 334, 365 |
| Tru1I | TTAA | 2 cut(s) | 222, 424 |
| Tru9I | TTAA | 2 cut(s) | 222, 424 |
| TseI | GCWGC | 3 cut(s) | 151, 389, 392 |
| TspDTI | ATGAA | 1 cut(s) | 39 |
| TspGWI | ACGGA | 2 cut(s) | 60, 281 |
| XapI | RAATTY | 1 cut(s) | 79 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 91 |
| XhoI | CTCGAG | 1 cut(s) | 146 |
| XmiI | GTMKAC | 1 cut(s) | 5 |
| XspI | CTAG | 1 cut(s) | 239 |