Glycogen recognition site of AMP-activated protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom02g24540 |
| rosa_chinensis | RchiOBHm_Chr1g0333081 RchiOBHm_Chr1g0334021 RchiOBHm_Chr1g0335171 |
| rosa_roxburghii | Rroxscaffold_4G00326810 |
| rosa_samantha | Rh1CG134000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 64 |
| AcsI | RAATTY | 1 cut(s) | 170 |
| AfaI | GTAC | 3 cut(s) | 15, 71, 125 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 182 |
| AjnI | CCWGG | 1 cut(s) | 115 |
| AluBI | AGCT | 1 cut(s) | 160 |
| AluI | AGCT | 1 cut(s) | 160 |
| Alw26I | GTCTC | 1 cut(s) | 106 |
| Aor13HI | TCCGGA | 1 cut(s) | 64 |
| ApoI | RAATTY | 1 cut(s) | 170 |
| AseI | ATTAAT | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 3 cut(s) | 76, 156, 197 |
| BaeGI | GKGCMC | 1 cut(s) | 29 |
| BccI | CCATC | 3 cut(s) | 29, 33, 140 |
| BciT130I | CCWGG | 1 cut(s) | 117 |
| BcoDI | GTCTC | 1 cut(s) | 106 |
| BfmI | CTRYAG | 1 cut(s) | 177 |
| Bme1390I | CCNGG | 1 cut(s) | 117 |
| BmrFI | CCNGG | 1 cut(s) | 117 |
| BsaI | GGTCTC | 1 cut(s) | 106 |
| BsaWI | WCCGGW | 1 cut(s) | 64 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 182 |
| Bse1I | ACTGG | 1 cut(s) | 79 |
| BseAI | TCCGGA | 1 cut(s) | 64 |
| BseBI | CCWGG | 1 cut(s) | 117 |
| BseGI | GGATG | 1 cut(s) | 44 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 182 |
| BseMII | CTCAG | 1 cut(s) | 101 |
| BseNI | ACTGG | 1 cut(s) | 79 |
| BseSI | GKGCMC | 1 cut(s) | 29 |
| BsiSI | CCGG | 1 cut(s) | 65 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 182 |
| BsmAI | GTCTC | 1 cut(s) | 106 |
| Bso31I | GGTCTC | 1 cut(s) | 106 |
| Bsp1286I | GDGCHC | 1 cut(s) | 29 |
| Bsp13I | TCCGGA | 1 cut(s) | 64 |
| Bsp1407I | TGTACA | 1 cut(s) | 13 |
| BspCNI | CTCAG | 1 cut(s) | 102 |
| BspEI | TCCGGA | 1 cut(s) | 64 |
| BspTNI | GGTCTC | 1 cut(s) | 106 |
| BsrGI | TGTACA | 1 cut(s) | 13 |
| BsrI | ACTGG | 1 cut(s) | 79 |
| Bst2UI | CCWGG | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 1 cut(s) | 181 |
| BstAUI | TGTACA | 1 cut(s) | 13 |
| BstDEI | CTNAG | 2 cut(s) | 6, 110 |
| BstF5I | GGATG | 1 cut(s) | 44 |
| BstMAI | GTCTC | 1 cut(s) | 106 |
| BstNI | CCWGG | 1 cut(s) | 117 |
| BstSCI | CCNGG | 1 cut(s) | 115 |
| BstSFI | CTRYAG | 1 cut(s) | 177 |
| BstSLI | GKGCMC | 1 cut(s) | 29 |
| BtsCI | GGATG | 1 cut(s) | 44 |
| BtsIMutI | CAGTG | 1 cut(s) | 72 |
| Csp6I | GTAC | 3 cut(s) | 14, 70, 124 |
| CviJI | RGCY | 2 cut(s) | 5, 160 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 160 |
| CviQI | GTAC | 3 cut(s) | 14, 70, 124 |
| DdeI | CTNAG | 2 cut(s) | 6, 110 |
| Eco31I | GGTCTC | 1 cut(s) | 106 |
| EcoRI | GAATTC | 1 cut(s) | 170 |
| EcoRII | CCWGG | 1 cut(s) | 115 |
| FaiI | YATR | 1 cut(s) | 23 |
| FokI | GGATG | 1 cut(s) | 51 |
| HapII | CCGG | 1 cut(s) | 65 |
| HinfI | GANTC | 1 cut(s) | 43 |
| HpaII | CCGG | 1 cut(s) | 65 |
| HphI | GGTGA | 3 cut(s) | 76, 156, 197 |
| Hpy166II | GTNNAC | 2 cut(s) | 14, 72 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 94 |
| Hpy8I | GTNNAC | 2 cut(s) | 14, 72 |
| HpyCH4III | ACNGT | 1 cut(s) | 181 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 110 |
| Kpn2I | TCCGGA | 1 cut(s) | 64 |
| LpnPI | CCDG | 5 cut(s) | 60, 78, 102, 129, 180 |
| MhlI | GDGCHC | 1 cut(s) | 29 |
| MluCI | AATT | 2 cut(s) | 170, 213 |
| MlyI | GAGTC | 1 cut(s) | 52 |
| MnlI | CCTC | 2 cut(s) | 46, 181 |
| MroI | TCCGGA | 1 cut(s) | 64 |
| MseI | TTAA | 3 cut(s) | 104, 194, 212 |
| MspI | CCGG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 1 cut(s) | 117 |
| MvaI | CCWGG | 1 cut(s) | 117 |
| PleI | GAGTC | 1 cut(s) | 51 |
| PpsI | GAGTC | 1 cut(s) | 51 |
| PshBI | ATTAAT | 1 cut(s) | 104 |
| Psp6I | CCWGG | 1 cut(s) | 115 |
| PspGI | CCWGG | 1 cut(s) | 115 |
| RsaI | GTAC | 3 cut(s) | 15, 71, 125 |
| RsaNI | GTAC | 3 cut(s) | 14, 70, 124 |
| SaqAI | TTAA | 3 cut(s) | 104, 194, 212 |
| SchI | GAGTC | 1 cut(s) | 52 |
| ScrFI | CCNGG | 1 cut(s) | 117 |
| SduI | GDGCHC | 1 cut(s) | 29 |
| SetI | ASST | 2 cut(s) | 118, 162 |
| SfcI | CTRYAG | 1 cut(s) | 177 |
| Sse9I | AATT | 2 cut(s) | 170, 213 |
| StyD4I | CCNGG | 1 cut(s) | 115 |
| TaaI | ACNGT | 1 cut(s) | 181 |
| TaqI | TCGA | 1 cut(s) | 95 |
| TasI | AATT | 2 cut(s) | 170, 213 |
| TatI | WGTACW | 2 cut(s) | 13, 69 |
| Tru1I | TTAA | 3 cut(s) | 104, 194, 212 |
| Tru9I | TTAA | 3 cut(s) | 104, 194, 212 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TspRI | CASTG | 1 cut(s) | 79 |
| VspI | ATTAAT | 1 cut(s) | 104 |
| XapI | RAATTY | 1 cut(s) | 170 |