Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0007391

Physical Location & Seq

Genomic Coordinates Reverse (-)

4596230 .. 4602569

Gene Structure 6340 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGTCTGTTTACGGTAAAGACACGGATCCAGCATTCCAGGCTGCAGGAACAAATCTTGGTTTGGAAATTTGGTGTGTTGAGAACCTAAAATTGGTTTCTGTTCCAAAATCTTCGCATCGGAAATTCTATTCCGGAAGTGCATATGTGGTTTTAAATACATTTCTGCCGAAAAATGGCCTTCCTCGGCATGACATACACTATTGGCTGGGAAATGACTCAAACAAGGAGGACTCGGCGTTGGCATCAGATAAAGCACTAGAACTAGATGCATCCCTAGGGTCCTGCACTGTGCAATATAGGGAGCTTCAAGGCCATGAAACACAAAAGTTTTTATCATACTTCAAACCCTGTATTATCCCCATTGAAGGAGCATATAGAACACAACAAGAGCGCTTAAATGGTGAAACATATAAAGTCAGCTTGTTAGCTTGCAAAGGGGACCATGTTGTTCATGTTAAAGAAGTTCCTTTCTCTCGGTCATCACTGAACCACAATGACGTATTCATACTTGATACTGCATCAAAAATTTTCCTCTTTAGTGGGTGCAACTCTAGCATACAGGAAAGAGCCAAGGGTTTGGAGGTTGTTCAATACATCAAAGAGAATAAGCATCGGGAAAAATGCGAGGTGGCAACTGTAGAGGATGGAAAATTCGTTGGTGATCCTGAAGTGGGTGACTTTTGGAGCTTATTTGGTGGGTATGCTCCCATTCCCCAGGATCCACCGTCTTCTGTCCAGGAAAAACCGGAGACACCCTTTGTGAAACTATCGTGGATATCAACTCAGGGTAAACTATGTCCATGTCGAACTGACTCACTAAATAAAGAAATGCTGGAGACGGACAAGTGTTATATGCTGGACTGTGATTCTGAGATTTTTGTTTGGATGGGAAAGCATACCTCAGTTTCAGAAAGAAAAACATCAATTTCCGCTACAGAAGATTTCCTCAGAAACCAAGGCAGGTCAGCGGGGACTCATTCAGTGTTTATAACTGAAGGATTAGAAACTGTTAAGTTTAGGTCATACTTTGATAATTGGCCTCAAACGGTCAAAATCAAGCTGTATGAAGAAGGCCGAGAGAAAGTAGCAGCAATGTTCAAGCAAAAGGGTTATGAGGTGAAAGAGCTTCCAGATGAAGAAGACATCCAGCCATTTATAGATTGCAGTGGCACATTGAAGGTTTGGCGGGTGGATGGTGATAAACTGTCCCTCATTCCAGCTTCAGACCAGCGAAAAATATTCAGCGGGGATTGCTATGTTGTGCAGTATACTTATCCCGGAAAGGAAAAGAGTGACAATCTCTTTTATGCATGGCTTGGCTGTCAAAGTGTAACGGAAGATAGAAGGGATGCTATCTCTCGTATGAATGCCCTAGTTGATTCAACCAAGGGAGACCCTGTTTTGGCTCAAGTTATGGAGAACAAGGAGCCTTCTCAATTCTTTTCCATTTTCCGGACATTAATAATTTACAAGGGAGGTAGGAGTGCACGATACAAGAATTTTATAGCAGAAAATGGTATTGCAGATGAAACTTATGATGAAAGCAAGACAGCCCTTTTTCGTGTTCAAGGGACAAGTCCCAACAATATGCAGGCAATCCAAGTCGATCCAGTTTCGAGATCTTTGAACTCGTGTTATTGTTACATCCTGCAAACTGGTGCATCTGCTTTCACTTGGATTGGGAATCTCTCCTCGACCGGAGACCATGACCTTCTTGACAGAATGCTCGAATTAATACATCCAACTTGGCAAGCCGTATCACTGAGGGAAGGGAGCGAATCTGATACTTTCTGGAATGTGCTTGGTGGAAAGGCTGAGTATCCGAGGGCAAAAGAAATAAAAGGACACATGGAAGACCCAAATTTGTTTATGTTGAGCATAACTGAAGGTGATTTCAAGGTGAAGGAGATATACAATTTTACACAGGATGATTTAACTACTGAAGACGTGTTAGTACTTGACTGCCACGACGAGATTTATGTTTGGATTGGATGCCACTCTAACATTAGTTCAAAGAAACAAGCCCTTACTCTTGGCCTGAAATTTCTCGAGACGGATGTACTGGTTGAAGGGCTATCTTTGGAGACTCCTATGTATGTTGTTAGTGAAGGGCACGAACCACCATTTTTCACTCGTTTCTTTGAATGGGATCCATCAAAGTCAAATATGCATGGCAACTCATTTGAGCGGAAGCTAGCTATTTTAAAAGGAAAACCACAACAATTAGAAGCACCTATAAGAAACACATGGAAAGCAAACTCCAGGTCCAGGGAGACAACCCCAGATGGTTTTAGAAGCAAGTCCATGAGTTCCAATGGCCGGAGAAGTGCTTCTCCTGCATCCGGTGGTTCAGTTTCTAATGTCAAGTCCCCAAACAATCACATCTTTTCCAGCTCATCTGCTCCAACTAAGAAACTCTTTCCAAAATCCTCTCCTTACAGTAGTCCTGGCGAGTCAATTGTACCTGCAGGTTCTCCAGTAAACTTACCAGATAATACAGGTGGCACTAAGGCTAATGGAAGTGAGCCTAGTGAAGGAGGCCTAAACTTGTTGACGTATCCATATGAACGACTCAAAGTGGTTTCTCTAAACCCGGCAGCAGGAATAGACATAACCAAAAGAGAGGCATATCTCTCTGATGAAGAATTCCAAGTGCATTTTGGAATGGCCAAAAGGGACTTCTATAAGCTTCCTAAATGGAAACAAAACAAGCAAAAGATGGCACTTCATCTTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010639 GO:0015629 GO:0016043 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

913

Amino Acids

102.43

Weight (kDa)

6.0

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	30 - 111	9.3e-12	Gelsolin repeat
Gelsolin	PF00626	149 - 217	1.6e-11	Gelsolin repeat
Gelsolin	PF00626	272 - 316	1.8e-07	Gelsolin repeat
Gelsolin	PF00626	636 - 710	7.1e-09	Gelsolin repeat
VHP	PF02209	877 - 912	3.7e-15	Villin headpiece domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007391)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29890 AT2G29890 AT2G29890 AT2G29890 AT2G29890
fragaria_vesca	FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450
malus_domestica	MD03G1071900.v1.1
prunus_persica	Prupe.6G058500_v2.0.a1
pyrus_communis	pycom03g05810
rosa_chinensis	RchiOBHm_Chr5g0069141
rosa_laevigata	RLG00000036039
rosa_multiflora	Rmu_sc0000936.1_g000012
rosa_roxburghii	Rroxscaffold_1G00011650
rosa_rugosa	Rorug05G0396200
rosa_samantha	Rh5BG472200 Rh5CG494600 Rh5DG484600
rosa_wichuraiana	Rw0G006050 Rw5G042310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	989
Acc36I	ACCTGC	3 cut(s)	951, 2459, 2473
AccBSI	CCGCTC	1 cut(s)	2188
AccI	GTMKAC	1 cut(s)	1268
AccIII	TCCGGA	2 cut(s)	131, 1452
AciI	CCGC	5 cut(s)	930, 968, 1186, 1245, 2188
AclWI	GGATC	8 cut(s)	20, 33, 656, 713, 726, 1601, 2144, 2157
AcoI	YGGCCR	2 cut(s)	2317, 2667
AcsI	RAATTY	8 cut(s)	66, 122, 525, 650, 1498, 1861, 2042, 2645
AcuI	CTGAAG	5 cut(s)	687, 1014, 1206, 1905, 1962
AfaI	GTAC	3 cut(s)	1956, 2061, 2463
AfeI	AGCGCT	1 cut(s)	392
AflIII	ACRYGT	1 cut(s)	1947
AjiI	CACGTC	1 cut(s)	1948
AjnI	CCWGG	6 cut(s)	36, 714, 735, 2261, 2267, 2446
AjuI	GAANNNNNNNTTGG	4 cut(s)	74, 106, 2663, 2695
Alw21I	GWGCWC	1 cut(s)	1489
Alw26I	GTCTC	7 cut(s)	743, 830, 1386, 1695, 2045, 2078, 2267
Alw44I	GTGCAC	1 cut(s)	1485
AlwI	GGATC	8 cut(s)	20, 33, 656, 713, 726, 1601, 2144, 2157
Ama87I	CYCGRG	1 cut(s)	2048
Aor13HI	TCCGGA	2 cut(s)	131, 1452
Aor51HI	AGCGCT	1 cut(s)	392
AoxI	GGCC	8 cut(s)	175, 310, 1037, 1072, 2035, 2317, 2539, 2667
ApaLI	GTGCAC	1 cut(s)	1485
ApeKI	GCWGC	3 cut(s)	41, 1088, 2597
ApoI	RAATTY	8 cut(s)	66, 122, 525, 650, 1498, 1861, 2042, 2645
ArsI	GACNNNNNNTTYG	2 cut(s)	2249, 2281
AseI	ATTAAT	2 cut(s)	1460, 1733
Asp700I	GAANNNNTTC	1 cut(s)	2329
AspA2I	CCTAGG	1 cut(s)	274
AspLEI	GCGC	1 cut(s)	393
AspS9I	GGNCC	3 cut(s)	279, 439, 2265
AsuC2I	CCSGG	2 cut(s)	1278, 2594
AsuHPI	GGTGA	7 cut(s)	413, 671, 686, 1129, 1208, 1901, 1912
AsuNHI	GCTAGC	1 cut(s)	2194
AvaI	CYCGRG	1 cut(s)	2048
AvaII	GGWCC	3 cut(s)	279, 439, 2265
AvrII	CCTAGG	1 cut(s)	274
BaeGI	GKGCMC	2 cut(s)	1489, 2115
BalI	TGGCCA	1 cut(s)	2669
BamHI	GGATCC	3 cut(s)	25, 718, 2149
BarI	GAAGNNNNNNTAC	2 cut(s)	1895, 1927
BauI	CACGAG	1 cut(s)	1630
BbsI	GAAGAC	4 cut(s)	720, 1146, 1860, 1950
Bbv12I	GWGCWC	1 cut(s)	1489
BbvI	GCAGC	3 cut(s)	28, 1100, 2609
BccI	CCATC	6 cut(s)	638, 880, 1187, 2161, 2279, 2713
BceAI	ACGGC	1 cut(s)	1739
BciT130I	CCWGG	6 cut(s)	38, 716, 737, 2263, 2269, 2448
BciVI	GTATCC	2 cut(s)	1830, 2568
BcnI	CCSGG	2 cut(s)	1278, 2594
BcoDI	GTCTC	7 cut(s)	743, 830, 1386, 1695, 2045, 2078, 2267
BfaI	CTAG	7 cut(s)	257, 263, 275, 552, 1373, 2195, 2529
BfmI	CTRYAG	4 cut(s)	42, 636, 933, 2466
BfoI	RGCGCY	1 cut(s)	394
BfuAI	ACCTGC	3 cut(s)	951, 2459, 2473
BfuI	GTATCC	2 cut(s)	1830, 2568
BglII	AGATCT	1 cut(s)	1619
BisI	GCNGC	3 cut(s)	42, 1089, 2598
BlnI	CCTAGG	1 cut(s)	274
BlsI	GCNGC	3 cut(s)	43, 1090, 2599
BmcAI	AGTACT	1 cut(s)	1956
Bme1390I	CCNGG	8 cut(s)	38, 716, 737, 1278, 2263, 2269, 2448, 2594
Bme18I	GGWCC	3 cut(s)	279, 439, 2265
BmeT110I	CYCGRG	1 cut(s)	2048
BmgBI	CACGTC	1 cut(s)	1948
BmgT120I	GGNCC	3 cut(s)	279, 439, 2265
BmiI	GGNNCC	6 cut(s)	27, 280, 440, 720, 1428, 2151
BmrFI	CCNGG	8 cut(s)	38, 716, 737, 1278, 2263, 2269, 2448, 2594
BmtI	GCTAGC	1 cut(s)	2198
BpiI	GAAGAC	4 cut(s)	720, 1146, 1860, 1950
BpmI	CTGGAG	3 cut(s)	854, 2245, 2460
BpuEI	CTTGAG	1 cut(s)	1392
BpuMI	CCSGG	2 cut(s)	1278, 2594
BsaI	GGTCTC	2 cut(s)	1386, 1695
BsaJI	CCNNGG	8 cut(s)	182, 274, 570, 714, 955, 1386, 1823, 2268
BsaWI	WCCGGW	5 cut(s)	131, 745, 1452, 1697, 2342
BsaXI	ACNNNNNCTCC	2 cut(s)	1383, 1413
Bse1I	ACTGG	4 cut(s)	1610, 1660, 2067, 2477
Bse3DI	GCAATG	1 cut(s)	1098
BseAI	TCCGGA	2 cut(s)	131, 1452
BseBI	CCWGG	6 cut(s)	38, 716, 737, 2263, 2269, 2448
BseDI	CCNNGG	8 cut(s)	182, 274, 570, 714, 955, 1386, 1823, 2268
BseMI	GCAATG	1 cut(s)	1098
BseMII	CTCAG	6 cut(s)	797, 861, 915, 961, 1754, 1806
BseNI	ACTGG	4 cut(s)	1610, 1660, 2067, 2477
BseRI	GAGGAG	1 cut(s)	1681
BseSI	GKGCMC	2 cut(s)	1489, 2115
BseXI	GCAGC	3 cut(s)	28, 1100, 2609
BseYI	CCCAGC	1 cut(s)	205
BsgI	GTGCAG	2 cut(s)	268, 1283
Bsh1285I	CGRYCG	1 cut(s)	1698
BshFI	GGCC	8 cut(s)	177, 312, 1039, 1074, 2037, 2319, 2541, 2669
BsiEI	CGRYCG	1 cut(s)	1698
BsiHKAI	GWGCWC	1 cut(s)	1489
BsiHKCI	CYCGRG	1 cut(s)	2048
BsiSI	CCGG	8 cut(s)	132, 746, 1278, 1453, 1698, 2320, 2343, 2594
BslFI	GGGAC	7 cut(s)	452, 985, 1192, 1563, 1585, 2353, 2690
BsmAI	GTCTC	7 cut(s)	743, 830, 1386, 1695, 2045, 2078, 2267
BsmBI	CGTCTC	2 cut(s)	830, 2045
BsmFI	GGGAC	7 cut(s)	452, 985, 1192, 1563, 1585, 2353, 2690
BsmI	GAATGC	3 cut(s)	32, 1372, 1728
BsnI	GGCC	8 cut(s)	177, 312, 1039, 1074, 2037, 2319, 2541, 2669
Bso31I	GGTCTC	2 cut(s)	1386, 1695
BsoBI	CYCGRG	1 cut(s)	2048
Bsp1286I	GDGCHC	2 cut(s)	1489, 2115
Bsp13I	TCCGGA	2 cut(s)	131, 1452
Bsp143I	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
BspACI	CCGC	5 cut(s)	930, 968, 1186, 1245, 2188
BspANI	GGCC	8 cut(s)	177, 312, 1039, 1074, 2037, 2319, 2541, 2669
BspCNI	CTCAG	6 cut(s)	796, 862, 914, 960, 1755, 1807
BspEI	TCCGGA	2 cut(s)	131, 1452
BspLI	GGNNCC	6 cut(s)	27, 280, 440, 720, 1428, 2151
BspMAI	CTGCAG	2 cut(s)	46, 2470
BspMI	ACCTGC	3 cut(s)	951, 2459, 2473
BspOI	GCTAGC	1 cut(s)	2198
BspPI	GGATC	8 cut(s)	20, 33, 656, 713, 726, 1601, 2144, 2157
BspTNI	GGTCTC	2 cut(s)	1386, 1695
BsrBI	CCGCTC	1 cut(s)	2188
BsrDI	GCAATG	1 cut(s)	1098
BsrI	ACTGG	4 cut(s)	1610, 1660, 2067, 2477
BssECI	CCNNGG	8 cut(s)	182, 274, 570, 714, 955, 1386, 1823, 2268
BssMI	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
BssNAI	GTATAC	1 cut(s)	1269
BssSI	CACGAG	1 cut(s)	1630
BssT1I	CCWWGG	4 cut(s)	274, 570, 955, 1386
Bst1107I	GTATAC	1 cut(s)	1269
Bst2BI	CACGAG	1 cut(s)	1630
Bst2UI	CCWGG	6 cut(s)	38, 716, 737, 2263, 2269, 2448
Bst4CI	ACNGT	9 cut(s)	14, 289, 637, 726, 863, 1009, 1048, 1206, 2441
BstC8I	GCNNGC	4 cut(s)	430, 1593, 1752, 2196
BstDEI	CTNAG	8 cut(s)	783, 870, 901, 947, 1763, 1815, 2409, 2508
BstENI	CCTNNNNNAGG	1 cut(s)	2532
BstH2I	RGCGCY	1 cut(s)	394
BstHHI	GCGC	1 cut(s)	393
BstKTI	GATC	6 cut(s)	28, 664, 721, 1609, 1622, 2152
BstMAI	GTCTC	7 cut(s)	743, 830, 1386, 1695, 2045, 2078, 2267
BstMBI	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
BstMCI	CGRYCG	1 cut(s)	1698
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 552, 1251, 2336
BstNI	CCWGG	6 cut(s)	38, 716, 737, 2263, 2269, 2448
BstSCI	CCNGG	8 cut(s)	36, 714, 735, 1276, 2261, 2267, 2446, 2592
BstSFI	CTRYAG	4 cut(s)	42, 636, 933, 2466
BstSLI	GKGCMC	2 cut(s)	1489, 2115
BstV1I	GCAGC	3 cut(s)	28, 1100, 2609
BstV2I	GAAGAC	4 cut(s)	720, 1146, 1860, 1950
BstX2I	RGATCY	4 cut(s)	25, 718, 1619, 2149
BstXI	CCANNNNNNTGG	1 cut(s)	577
BstYI	RGATCY	4 cut(s)	25, 718, 1619, 2149
BstZ17I	GTATAC	1 cut(s)	1269
BsuI	GTATCC	2 cut(s)	1830, 2568
BsuRI	GGCC	8 cut(s)	177, 312, 1039, 1074, 2037, 2319, 2541, 2669
BtrI	CACGTC	1 cut(s)	1948
BtsI	GCAGTG	1 cut(s)	1171
BtsIMutI	CAGTG	5 cut(s)	285, 482, 987, 1171, 1760
BveI	ACCTGC	3 cut(s)	951, 2459, 2473
Cac8I	GCNNGC	4 cut(s)	430, 1593, 1752, 2196
CfoI	GCGC	1 cut(s)	393
Cfr13I	GGNCC	3 cut(s)	279, 439, 2265
Csp6I	GTAC	3 cut(s)	1955, 2060, 2462
CviQI	GTAC	3 cut(s)	1955, 2060, 2462
DdeI	CTNAG	8 cut(s)	783, 870, 901, 947, 1763, 1815, 2409, 2508
DpnI	GATC	6 cut(s)	27, 663, 720, 1608, 1621, 2151
DpnII	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
DraI	TTTAAA	2 cut(s)	153, 2205
EaeI	YGGCCR	2 cut(s)	2317, 2667
Eco130I	CCWWGG	4 cut(s)	274, 570, 955, 1386
Eco147I	AGGCCT	1 cut(s)	2541
Eco31I	GGTCTC	2 cut(s)	1386, 1695
Eco32I	GATATC	1 cut(s)	777
Eco47I	GGWCC	3 cut(s)	279, 439, 2265
Eco47III	AGCGCT	1 cut(s)	392
Eco57I	CTGAAG	5 cut(s)	687, 1014, 1206, 1905, 1962
Eco88I	CYCGRG	1 cut(s)	2048
EcoNI	CCTNNNNNAGG	1 cut(s)	2532
EcoO109I	RGGNCCY	1 cut(s)	279
EcoRI	GAATTC	1 cut(s)	2645
EcoRII	CCWGG	6 cut(s)	36, 714, 735, 2261, 2267, 2446
EcoRV	GATATC	1 cut(s)	777
EcoT14I	CCWWGG	4 cut(s)	274, 570, 955, 1386
EcoT22I	ATGCAT	3 cut(s)	271, 1312, 2172
ErhI	CCWWGG	4 cut(s)	274, 570, 955, 1386
Esp3I	CGTCTC	2 cut(s)	830, 2045
FalI	AAGNNNNNCTT	2 cut(s)	2402, 2434
FaqI	GGGAC	7 cut(s)	452, 985, 1192, 1563, 1585, 2353, 2690
FauI	CCCGC	3 cut(s)	961, 1179, 1238
FauNDI	CATATG	2 cut(s)	142, 2563
FblI	GTMKAC	1 cut(s)	1268
Fnu4HI	GCNGC	3 cut(s)	42, 1089, 2598
Fsp4HI	GCNGC	3 cut(s)	42, 1089, 2598
FspBI	CTAG	7 cut(s)	257, 263, 275, 552, 1373, 2195, 2529
GlaI	GCGC	1 cut(s)	392
GluI	GCNGC	3 cut(s)	42, 1089, 2598
GsaI	CCCAGC	1 cut(s)	209
GsuI	CTGGAG	3 cut(s)	854, 2245, 2460
HaeII	RGCGCY	1 cut(s)	394
HaeIII	GGCC	8 cut(s)	177, 312, 1039, 1074, 2037, 2319, 2541, 2669
HapII	CCGG	8 cut(s)	132, 746, 1278, 1453, 1698, 2320, 2343, 2594
HhaI	GCGC	1 cut(s)	393
Hin6I	GCGC	1 cut(s)	391
HinP1I	GCGC	1 cut(s)	391
HincII	GTYRAC	1 cut(s)	2553
HindII	GTYRAC	1 cut(s)	2553
HindIII	AAGCTT	1 cut(s)	2687
HpaII	CCGG	8 cut(s)	132, 746, 1278, 1453, 1698, 2320, 2343, 2594
HphI	GGTGA	7 cut(s)	413, 671, 686, 1129, 1208, 1901, 1912
Hpy166II	GTNNAC	6 cut(s)	10, 791, 1269, 1487, 2482, 2553
Hpy188I	TCNGA	9 cut(s)	120, 247, 871, 910, 950, 1225, 1783, 1824, 2638
Hpy8I	GTNNAC	6 cut(s)	10, 791, 1269, 1487, 2482, 2553
Hpy99I	CGWCG	1 cut(s)	1973
HpyCH4III	ACNGT	9 cut(s)	14, 289, 637, 726, 863, 1009, 1048, 1206, 2441
HpyCH4IV	ACGT	3 cut(s)	498, 1947, 2555
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 552, 1251, 2336
HpyF3I	CTNAG	8 cut(s)	783, 870, 901, 947, 1763, 1815, 2409, 2508
HpySE526I	ACGT	3 cut(s)	498, 1947, 2555
HspAI	GCGC	1 cut(s)	391
Kpn2I	TCCGGA	2 cut(s)	131, 1452
Kzo9I	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
LmnI	GCTCC	7 cut(s)	301, 368, 684, 709, 1426, 1773, 2407
Lsp1109I	GCAGC	3 cut(s)	28, 1100, 2609
MaeI	CTAG	7 cut(s)	257, 263, 275, 552, 1373, 2195, 2529
MaeII	ACGT	3 cut(s)	498, 1947, 2555
MaeIII	GTNAC	4 cut(s)	674, 1292, 1330, 1640
MalI	GATC	6 cut(s)	27, 663, 720, 1608, 1621, 2151
MbiI	CCGCTC	1 cut(s)	2188
MboI	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
MfeI	CAATTG	1 cut(s)	2457
MflI	RGATCY	4 cut(s)	25, 718, 1619, 2149
MhlI	GDGCHC	2 cut(s)	1489, 2115
MlsI	TGGCCA	1 cut(s)	2669
MluNI	TGGCCA	1 cut(s)	2669
MlyI	GAGTC	7 cut(s)	209, 224, 806, 967, 2080, 2462, 2565
MmeI	TCCRAC	2 cut(s)	1766, 2429
Mox20I	TGGCCA	1 cut(s)	2669
Mph1103I	ATGCAT	3 cut(s)	271, 1312, 2172
MroI	TCCGGA	2 cut(s)	131, 1452
MroXI	GAANNNNTTC	1 cut(s)	2329
MscI	TGGCCA	1 cut(s)	2669
MseI	TTAA	8 cut(s)	152, 395, 456, 1011, 1460, 1733, 1934, 2204
Msp20I	TGGCCA	1 cut(s)	2669
MspA1I	CMGCKG	2 cut(s)	968, 1245
MspI	CCGG	8 cut(s)	132, 746, 1278, 1453, 1698, 2320, 2343, 2594
MspR9I	CCNGG	8 cut(s)	38, 716, 737, 1278, 2263, 2269, 2448, 2594
MunI	CAATTG	1 cut(s)	2457
Mva1269I	GAATGC	3 cut(s)	32, 1372, 1728
MvaI	CCWGG	6 cut(s)	38, 716, 737, 2263, 2269, 2448
MwoI	GCNNNNNNNGC	4 cut(s)	38, 552, 1251, 2336
NciI	CCSGG	2 cut(s)	1278, 2594
NdeI	CATATG	2 cut(s)	142, 2563
NdeII	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
NheI	GCTAGC	1 cut(s)	2194
NlaIV	GGNNCC	6 cut(s)	27, 280, 440, 720, 1428, 2151
NmeAIII	GCCGAG	3 cut(s)	163, 212, 1100
NmuCI	GTSAC	2 cut(s)	674, 1292
NsiI	ATGCAT	3 cut(s)	271, 1312, 2172
PaeR7I	CTCGAG	1 cut(s)	2048
PceI	AGGCCT	1 cut(s)	2541
PctI	GAATGC	3 cut(s)	32, 1372, 1728
PdmI	GAANNNNTTC	1 cut(s)	2329
PfeI	GAWTC	4 cut(s)	866, 1379, 1684, 1778
PfoI	TCCNGGA	2 cut(s)	735, 1276
PkrI	GCNGC	3 cut(s)	43, 1090, 2599
PleI	GAGTC	7 cut(s)	209, 224, 806, 967, 2080, 2461, 2565
PpsI	GAGTC	7 cut(s)	209, 224, 806, 967, 2080, 2461, 2565
PpuMI	RGGWCCY	1 cut(s)	279
PshBI	ATTAAT	2 cut(s)	1460, 1733
PsiI	TTATAA	1 cut(s)	989
Psp5II	RGGWCCY	1 cut(s)	279
Psp6I	CCWGG	6 cut(s)	36, 714, 735, 2261, 2267, 2446
PspFI	CCCAGC	1 cut(s)	205
PspGI	CCWGG	6 cut(s)	36, 714, 735, 2261, 2267, 2446
PspN4I	GGNNCC	6 cut(s)	27, 280, 440, 720, 1428, 2151
PspPI	GGNCC	3 cut(s)	279, 439, 2265
PspPPI	RGGWCCY	1 cut(s)	279
PstI	CTGCAG	2 cut(s)	46, 2470
PsuI	RGATCY	4 cut(s)	25, 718, 1619, 2149
RsaI	GTAC	3 cut(s)	1956, 2061, 2463
RsaNI	GTAC	3 cut(s)	1955, 2060, 2462
SaqAI	TTAA	8 cut(s)	152, 395, 456, 1011, 1460, 1733, 1934, 2204
SatI	GCNGC	3 cut(s)	42, 1089, 2598
Sau3AI	GATC	6 cut(s)	25, 661, 718, 1606, 1619, 2149
Sau96I	GGNCC	3 cut(s)	279, 439, 2265
SbfI	CCTGCAGG	1 cut(s)	2470
ScaI	AGTACT	1 cut(s)	1956
SchI	GAGTC	7 cut(s)	209, 224, 806, 967, 2080, 2462, 2565
ScrFI	CCNGG	8 cut(s)	38, 716, 737, 1278, 2263, 2269, 2448, 2594
SdaI	CCTGCAGG	1 cut(s)	2470
SduI	GDGCHC	2 cut(s)	1489, 2115
SfcI	CTRYAG	4 cut(s)	42, 636, 933, 2466
Sfr274I	CTCGAG	1 cut(s)	2048
SinI	GGWCC	3 cut(s)	279, 439, 2265
SlaI	CTCGAG	1 cut(s)	2048
SmlI	CTYRAG	2 cut(s)	1407, 2048
SmoI	CTYRAG	2 cut(s)	1407, 2048
Sse8387I	CCTGCAGG	1 cut(s)	2470
SseBI	AGGCCT	1 cut(s)	2541
SsiI	CCGC	5 cut(s)	930, 968, 1186, 1245, 2188
SspI	AATATT	1 cut(s)	1239
SspMI	CTAG	7 cut(s)	257, 263, 275, 552, 1373, 2195, 2529
StuI	AGGCCT	1 cut(s)	2541
StyD4I	CCNGG	8 cut(s)	36, 714, 735, 1276, 2261, 2267, 2446, 2592
StyI	CCWWGG	4 cut(s)	274, 570, 955, 1386
TaaI	ACNGT	9 cut(s)	14, 289, 637, 726, 863, 1009, 1048, 1206, 2441
TaiI	ACGT	3 cut(s)	501, 1950, 2558
TaqI	TCGA	6 cut(s)	805, 1605, 1616, 1694, 1728, 2049
TaqII	GACCGA	1 cut(s)	465
TatI	WGTACW	2 cut(s)	1954, 2059
TfiI	GAWTC	4 cut(s)	866, 1379, 1684, 1778
Tru1I	TTAA	8 cut(s)	152, 395, 456, 1011, 1460, 1733, 1934, 2204
Tru9I	TTAA	8 cut(s)	152, 395, 456, 1011, 1460, 1733, 1934, 2204
TscAI	CASTG	5 cut(s)	292, 489, 987, 1171, 1767
TseFI	GTSAC	2 cut(s)	674, 1292
TseI	GCWGC	3 cut(s)	41, 1088, 2597
Tsp45I	GTSAC	2 cut(s)	674, 1292
TspGWI	ACGGA	4 cut(s)	38, 854, 1349, 2069
TspRI	CASTG	5 cut(s)	292, 489, 987, 1171, 1767
VneI	GTGCAC	1 cut(s)	1485
VpaK11BI	GGWCC	3 cut(s)	279, 439, 2265
VspI	ATTAAT	2 cut(s)	1460, 1733
XagI	CCTNNNNNAGG	1 cut(s)	2532
XapI	RAATTY	8 cut(s)	66, 122, 525, 650, 1498, 1861, 2042, 2645
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2657
XhoI	CTCGAG	1 cut(s)	2048
XmaJI	CCTAGG	1 cut(s)	274
XmiI	GTMKAC	1 cut(s)	1268
XmnI	GAANNNNTTC	1 cut(s)	2329
XspI	CTAG	7 cut(s)	257, 263, 275, 552, 1373, 2195, 2529
ZrmI	AGTACT	1 cut(s)	1956
Zsp2I	ATGCAT	3 cut(s)	271, 1312, 2172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.