Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001569

Physical Location & Seq

Genomic Coordinates Forward (+)

32817924 .. 32825480

Gene Structure 7557 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g38450.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2688 bp

ATGTCTATTTATGCTAAAGATACAGATCCAGCATTCCAGGCTGCAGGAGCAACGCTTGGCTTGGAGATTTGGTGTATTGAGAACCAAAAATTGGTTTCTGTCCCAAAATCTTCACATGGGAGATTCTATTCTGGGAGTACATATCTAATCTTGAGTACAATTCTGCCAAAGAGTGGCGCTCTTCAGCATGACATACACTATTGGACCGGAAAGAATGCAAATAAGGTGGACTCAGTGTTGGCATCAGATAAAGCACTTGAACTAGATGCAGCTCTTGGGTCATGCACTGTGCAGTATATGGAACTTCAAGGCCGGGAAACCGGAAAGTTTTTGTCATATTTCAAGCCCTGTATTATACCCATTGAAGGAGTATATGCATCACAGAAAGACCACTTGAAAAGAGAGACATATAAAGTCACACTGTTAGCTTGCAAAGGGGACCATGTTGTTCATGTTAAAGAAGTGCCTTTTTCTCGTTCATCGTTGAACCACAATGATGTATTCATACTTGATACTGCCTCAAAAATTTTCCTCTTTAGTGGGTGTAACTCTAGCATACAAGAAAGAGCAAAAGCTTTGGAAGTTGTCCAGTACATCAAAGAGAATAAACATTCTGGAAACTGTGAGGTGGCAACTGTAGAGGATGGAAAATTTGTTGGTGATCCTGATGTGGGTGAATTCTGGAGCTTATTTGGTGGTTATGCTCCCATTCCCCAGGATTCACCTTCTCCTGTTCAGAAACAGTCTGAAGCACCCTTTGTGAAACTTTCATGGATAACGACTCGGGGTAAATTAGATCCATGTCAAACTGATTCATTCAGTAAAGAAATGCTTGAGACGGACAAATGCTATATGCTGGACTGTAATTCAGAAATCTTTGTTTGGATGGGAAGGCATACCTCAGTTACAGAAAGGAAAACATCAATCTCGGCTACAGAAGATTTCCTCAGAAACCAAGGCAGGTCAGCTGGTACGCATGTGACTAATATAACGGAAGGGCTAGAAACTGCAAAGTTTAGGTCATATTTTTACAATTGGCCCCAAACGGTGGAGCTCAAGCTGTATGAAGAAGCAATGTTTAAGCAACAAGGTTATGCAGTGCAAGAGCTTCCTGATGAAGAAGATATCCAGCCATTTATAGACTGCAGAGGAAAATTGAAAGTTTGGTGGGTAGATGGTGACAGACTGTCCCTTGTTCCAGCCTCAGAACAGAGAAAGCTTTTCAGTGGGGATTGCTACATTCTGCAATATACATATCTTGGCAACGAAAGGGACGAGAATCTATTCTATGCATGGCTTGGTCGTGGGAGTGTAATGGAGGATAAAAGAGACGCTATCTCTCATATGAATGCCATGGTTGAGTCAGGCAGGGGAAAACCTGTTGTGGCTCAAATATTGGAGAATAAGGAGCCATCTCAATTTTTTTCAATTTTACAGACGTTAATTGTTTTTAAGGGAGGTAGGAGTCAACGATACAAAAAGTTTGTGGCAGAAATGGGTATTGCAGATGAAACTTATGATGAAAGTAAGACAGCTCTTTTTCGTGTTCAAGGAATGAGTCCTCACAACATGCAGGCCATCCAAGTTGATACAGTTTGGGGCTCTTTGAACTCTTCCTATTGTTACATCCTGCAAACTGGTACATCCGTTATCACTTGGATTGGGAATCTCTCATCAGCCAGAGATCATGATCTTCTTGACAGAATGCTGGAGCTAATAAATCCAACATGGCAAGCCATATCAGTGAGGGAAGGGAGCGAATCTGATGTGTTCTGGAGTGCACTTGGTGAAAAGGCAGAGTATGCAAGAGGAAAAGAAATAAAAGGGTACATAGAAGATCCACATTTGTTTATGTTGAGTGGAACTGAAGGTGATTTCAAGGTGCAAGAGATATACAATTTCACACAGGATGATTTAAACACTGAAGACATGTTAGTCCTCGACTGCCACATAGAGATATATGTTTGGATTGGAAGCCTCTCAAATATTAAGTCAAAGCAGCAAGCCCTTACTCTTGGCCTGAAATTTCTTGAGACGGATGTACTTATGGAAGGGCTATCTTTGGAAACTCCTATATATGTTGTTAGTGAAGGGCATGAACCACCATTTTTCACTCGTTTCTTTGAATGGGATCCCTCAAAGTCAAATATGCATGGCAACTCATTTGAGCGGAAACTTGCGATTTTGAAAGGGAAACCACAACAGTTACAAGCACCAATAAGAAACTCATGGAAAGCTCCAATGACGCCGGATATTTTGAGAAGCAAGTCCTTGAGTTCCAATGGCCGGAGAAGAAGTTTTTCTCCTGCACCTGGTGCTTCATTTCCAATTATAAAGTCCAGCTCAGCTCCAATTGTCAGGAAACTTTTTAGAGGATCCTCTCTGAATGGTAGTCCAGATGAGTCATTTGCATCTGCAGTTTCCCTAGAGTCAGAGGAAATGTTATCCAAAAATGCGGGTAACATTCAGGCTAATGGAACTGAGGATCACATAAATCTGTCAGTTTATCCATACGAACGATTAACTGTCAATTCTAAAGACCCGGAAACCAGCATAGACATAACCAAAAGAGAGGCATATCTATCTGAAGAAGAGTTCAAAGTGAAATTTGGCATGACTAAACGAGACTTTTACAAGCTTCCCAAATGGAAACAAAACAAGCAGAAGATATCACTTCATCTTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010639 GO:0015629 GO:0016043 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

896

Amino Acids

101.12

Weight (kDa)

5.8

Isoelectric Point (pI)

46.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	29 - 110	1.2e-08	Gelsolin repeat
Gelsolin	PF00626	149 - 217	7.7e-12	Gelsolin repeat
Gelsolin	PF00626	270 - 339	1e-09	Gelsolin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001569)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30160 AT4G30160 AT4G30160 AT4G30160 AT5G57320 AT5G57320
fragaria_vesca	FvH4_3g38450 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730 FvH4_4g07730
malus_domestica	MD13G1246200.v1.1 MD16G1253700.v1.1
prunus_persica	Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1 Prupe.1G081400_v2.0.a1
pyrus_communis	pycom13g21710 pycom13g21730 pycom16g21490
rosa_chinensis	RchiOBHm_Chr4g0400761 RchiOBHm_Chr4g0400781
rosa_laevigata	RLG00000009180
rosa_multiflora	Rmu_co8351319.1_g000001 Rmu_co8425269.1_g000001 Rmu_sc0002636.1_g000035 Rmu_sc0035953.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345610
rosa_rugosa	Rorug04G0025800 Rorug04G0025800 Rorug04G0025900
rosa_samantha	Rh4AG103600 Rh4BG098700 Rh4CG111900 Rh4DG095600
rosa_wichuraiana	Rw4G008390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2333
AasI	GACNNNNNNGTC	1 cut(s)	1934
Acc36I	ACCTGC	1 cut(s)	951
AccB7I	CCANNNNNTGG	3 cut(s)	91, 173, 1048
AccBSI	CCGCTC	1 cut(s)	2170
AciI	CCGC	2 cut(s)	2170, 2456
AclWI	GGATC	9 cut(s)	20, 656, 791, 1832, 2126, 2139, 2370, 2383, 2493
AcoI	YGGCCR	1 cut(s)	2284
AcsI	RAATTY	5 cut(s)	525, 650, 677, 2024, 2606
AcuI	CTGAAG	5 cut(s)	167, 768, 1887, 1944, 2607
AcyI	GRCGYC	1 cut(s)	2246
AdeI	CACNNNGTG	2 cut(s)	1787, 2315
AfaI	GTAC	7 cut(s)	139, 157, 593, 973, 1642, 1829, 2043
AfiI	CCNNNNNNNGG	7 cut(s)	91, 173, 365, 671, 1048, 2286, 2312
AflIII	ACRYGT	1 cut(s)	1929
AhdI	GACNNNNNGTC	1 cut(s)	1186
AjnI	CCWGG	3 cut(s)	36, 714, 2311
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
Alw21I	GWGCWC	2 cut(s)	1056, 1783
Alw26I	GTCTC	5 cut(s)	398, 830, 1323, 2027, 2619
Alw44I	GTGCAC	1 cut(s)	1779
AlwI	GGATC	9 cut(s)	20, 656, 791, 1832, 2126, 2139, 2370, 2383, 2493
Ama87I	CYCGRG	1 cut(s)	783
AoxI	GGCC	5 cut(s)	310, 1037, 1575, 2017, 2284
ApaLI	GTGCAC	1 cut(s)	1779
ApeKI	GCWGC	3 cut(s)	41, 269, 1999
ApoI	RAATTY	5 cut(s)	525, 650, 677, 2024, 2606
ArsI	GACNNNNNNTTYG	4 cut(s)	1004, 1036, 1976, 2008
Asp700I	GAANNNNTTC	2 cut(s)	1283, 2299
AspLEI	GCGC	1 cut(s)	179
AspS9I	GGNCC	3 cut(s)	204, 439, 1038
AsuC2I	CCSGG	2 cut(s)	314, 2543
AsuHPI	GGTGA	6 cut(s)	671, 686, 714, 1190, 1799, 1883
AvaI	CYCGRG	1 cut(s)	783
AvaII	GGWCC	2 cut(s)	204, 439
BaeGI	GKGCMC	1 cut(s)	1783
BaeI	ACNNNNGTAYC	4 cut(s)	963, 996, 1632, 1665
BamHI	GGATCC	2 cut(s)	2131, 2375
BanII	GRGCYC	2 cut(s)	1056, 1604
BbsI	GAAGAC	1 cut(s)	1932
Bbv12I	GWGCWC	2 cut(s)	1056, 1783
BbvI	GCAGC	3 cut(s)	28, 281, 2011
BccI	CCATC	5 cut(s)	638, 880, 1169, 1420, 1586
BciT130I	CCWGG	3 cut(s)	38, 716, 2313
BcnI	CCSGG	2 cut(s)	314, 2543
BcoDI	GTCTC	5 cut(s)	398, 830, 1323, 2027, 2619
BfaI	CTAG	4 cut(s)	263, 552, 1001, 2426
BfmI	CTRYAG	5 cut(s)	42, 636, 933, 1144, 2415
BfoI	RGCGCY	1 cut(s)	180
BfuAI	ACCTGC	1 cut(s)	951
BisI	GCNGC	3 cut(s)	42, 270, 2000
BlpI	GCTNAGC	1 cut(s)	2344
BlsI	GCNGC	3 cut(s)	43, 271, 2001
Bme1390I	CCNGG	5 cut(s)	38, 314, 716, 2313, 2543
Bme18I	GGWCC	2 cut(s)	204, 439
BmeRI	GACNNNNNGTC	1 cut(s)	1186
BmeT110I	CYCGRG	1 cut(s)	783
BmgT120I	GGNCC	3 cut(s)	204, 439, 1038
BmiI	GGNNCC	5 cut(s)	440, 1040, 1410, 2133, 2377
BmrFI	CCNGG	5 cut(s)	38, 314, 716, 2313, 2543
BmsI	GCATC	4 cut(s)	251, 256, 386, 2420
BpiI	GAAGAC	1 cut(s)	1932
BplI	GAGNNNNNCTC	2 cut(s)	163, 195
BpmI	CTGGAG	3 cut(s)	703, 1730, 1795
Bpu1102I	GCTNAGC	1 cut(s)	2344
BpuEI	CTTGAG	5 cut(s)	172, 854, 1040, 2051, 2293
BpuMI	CCSGG	2 cut(s)	314, 2543
BsaBI	GATNNNNATC	2 cut(s)	24, 1689
BsaHI	GRCGYC	1 cut(s)	2246
BsaJI	CCNNGG	3 cut(s)	714, 955, 1353
BsaWI	WCCGGW	2 cut(s)	206, 320
BsaXI	ACNNNNNCTCC	4 cut(s)	56, 86, 2281, 2311
Bsc4I	CCNNNNNNNGG	7 cut(s)	91, 173, 365, 671, 1048, 2286, 2312
Bse1I	ACTGG	2 cut(s)	589, 1642
Bse3DI	GCAATG	1 cut(s)	1080
Bse8I	GATNNNNATC	2 cut(s)	24, 1689
BseBI	CCWGG	3 cut(s)	38, 716, 2313
BseDI	CCNNGG	3 cut(s)	714, 955, 1353
BseGI	GGATG	7 cut(s)	649, 891, 1578, 1626, 1643, 1915, 2044
BseJI	GATNNNNATC	2 cut(s)	24, 1689
BseLI	CCNNNNNNNGG	7 cut(s)	91, 173, 365, 671, 1048, 2286, 2312
BseMI	GCAATG	1 cut(s)	1080
BseMII	CTCAG	6 cut(s)	246, 915, 961, 1218, 2358, 2472
BseNI	ACTGG	2 cut(s)	589, 1642
BseSI	GKGCMC	1 cut(s)	1783
BseXI	GCAGC	3 cut(s)	28, 281, 2011
BsgI	GTGCAG	2 cut(s)	311, 2292
BshFI	GGCC	5 cut(s)	312, 1039, 1577, 2019, 2286
BsiHKAI	GWGCWC	2 cut(s)	1056, 1783
BsiHKCI	CYCGRG	1 cut(s)	783
BsiSI	CCGG	6 cut(s)	207, 313, 321, 2249, 2287, 2543
BslFI	GGGAC	4 cut(s)	86, 452, 1174, 1286
BslI	CCNNNNNNNGG	7 cut(s)	91, 173, 365, 671, 1048, 2286, 2312
BsmAI	GTCTC	5 cut(s)	398, 830, 1323, 2027, 2619
BsmBI	CGTCTC	3 cut(s)	830, 1323, 2027
BsmFI	GGGAC	4 cut(s)	86, 452, 1174, 1286
BsmI	GAATGC	4 cut(s)	32, 220, 1354, 1710
BsnI	GGCC	5 cut(s)	312, 1039, 1577, 2019, 2286
BsoBI	CYCGRG	1 cut(s)	783
Bsp1286I	GDGCHC	3 cut(s)	1056, 1604, 1783
Bsp143I	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
Bsp1720I	GCTNAGC	1 cut(s)	2344
Bsp19I	CCATGG	1 cut(s)	1353
BspACI	CCGC	2 cut(s)	2170, 2456
BspANI	GGCC	5 cut(s)	312, 1039, 1577, 2019, 2286
BspCNI	CTCAG	6 cut(s)	245, 914, 960, 1217, 2357, 2473
BspHI	TCATGA	1 cut(s)	1687
BspLI	GGNNCC	5 cut(s)	440, 1040, 1410, 2133, 2377
BspMAI	CTGCAG	3 cut(s)	46, 1148, 2419
BspMI	ACCTGC	1 cut(s)	951
BspPI	GGATC	9 cut(s)	20, 656, 791, 1832, 2126, 2139, 2370, 2383, 2493
BspQI	GCTCTTC	1 cut(s)	186
BsrBI	CCGCTC	1 cut(s)	2170
BsrDI	GCAATG	1 cut(s)	1080
BsrI	ACTGG	2 cut(s)	589, 1642
BssECI	CCNNGG	3 cut(s)	714, 955, 1353
BssMI	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
BssNI	GRCGYC	1 cut(s)	2246
BssT1I	CCWWGG	2 cut(s)	955, 1353
Bst2UI	CCWGG	3 cut(s)	38, 716, 2313
Bst6I	CTCTTC	3 cut(s)	186, 1618, 2586
BstACI	GRCGYC	1 cut(s)	2246
BstAPI	GCANNNNNTGC	2 cut(s)	1802, 2315
BstC8I	GCNNGC	4 cut(s)	430, 1575, 1734, 2004
BstDEI	CTNAG	6 cut(s)	232, 901, 947, 1204, 2344, 2481
BstDSI	CCRYGG	1 cut(s)	1353
BstF5I	GGATG	7 cut(s)	649, 891, 1578, 1626, 1643, 1915, 2044
BstH2I	RGCGCY	1 cut(s)	180
BstHHI	GCGC	1 cut(s)	179
BstKTI	GATC	9 cut(s)	28, 664, 799, 1687, 1693, 1840, 2134, 2378, 2488
BstMAI	GTCTC	5 cut(s)	398, 830, 1323, 2027, 2619
BstMBI	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 47, 1802, 2315
BstNI	CCWGG	3 cut(s)	38, 716, 2313
BstNSI	RCATGY	3 cut(s)	980, 1573, 1933
BstSCI	CCNGG	5 cut(s)	36, 312, 714, 2311, 2541
BstSFI	CTRYAG	5 cut(s)	42, 636, 933, 1144, 2415
BstSLI	GKGCMC	1 cut(s)	1783
BstV1I	GCAGC	3 cut(s)	28, 281, 2011
BstV2I	GAAGAC	1 cut(s)	1932
BstX2I	RGATCY	5 cut(s)	25, 796, 1837, 2131, 2375
BstYI	RGATCY	5 cut(s)	25, 796, 1837, 2131, 2375
BsuRI	GGCC	5 cut(s)	312, 1039, 1577, 2019, 2286
BtgI	CCRYGG	1 cut(s)	1353
BtsCI	GGATG	7 cut(s)	649, 891, 1578, 1626, 1643, 1915, 2044
BtsI	GCAGTG	1 cut(s)	1104
BtsIMutI	CAGTG	7 cut(s)	240, 285, 419, 1104, 1231, 1749, 1920
BveI	ACCTGC	1 cut(s)	951
Cac8I	GCNNGC	4 cut(s)	430, 1575, 1734, 2004
CciI	TCATGA	1 cut(s)	1687
CfoI	GCGC	1 cut(s)	179
Cfr13I	GGNCC	3 cut(s)	204, 439, 1038
CseI	GACGC	2 cut(s)	1340, 2254
CsiI	ACCWGGT	1 cut(s)	2311
Csp6I	GTAC	7 cut(s)	138, 156, 592, 972, 1641, 1828, 2042
CspCI	CAANNNNNGTGG	2 cut(s)	207, 242
CviQI	GTAC	7 cut(s)	138, 156, 592, 972, 1641, 1828, 2042
DdeI	CTNAG	6 cut(s)	232, 901, 947, 1204, 2344, 2481
DpnI	GATC	9 cut(s)	27, 663, 798, 1686, 1692, 1839, 2133, 2377, 2487
DpnII	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
DraI	TTTAAA	1 cut(s)	1917
DraIII	CACNNNGTG	2 cut(s)	1787, 2315
DrdI	GACNNNNNNGTC	1 cut(s)	1934
DriI	GACNNNNNGTC	1 cut(s)	1186
DseDI	GACNNNNNNGTC	1 cut(s)	1934
EaeI	YGGCCR	1 cut(s)	2284
Eam1104I	CTCTTC	3 cut(s)	186, 1618, 2586
Eam1105I	GACNNNNNGTC	1 cut(s)	1186
EarI	CTCTTC	3 cut(s)	186, 1618, 2586
Ecl136II	GAGCTC	1 cut(s)	1054
Eco130I	CCWWGG	2 cut(s)	955, 1353
Eco24I	GRGCYC	2 cut(s)	1056, 1604
Eco32I	GATATC	2 cut(s)	1126, 2670
Eco47I	GGWCC	2 cut(s)	204, 439
Eco53kI	GAGCTC	1 cut(s)	1054
Eco57I	CTGAAG	5 cut(s)	167, 768, 1887, 1944, 2607
Eco88I	CYCGRG	1 cut(s)	783
EcoICRI	GAGCTC	1 cut(s)	1054
EcoRI	GAATTC	1 cut(s)	677
EcoRII	CCWGG	3 cut(s)	36, 714, 2311
EcoRV	GATATC	2 cut(s)	1126, 2670
EcoT14I	CCWWGG	2 cut(s)	955, 1353
EcoT22I	ATGCAT	3 cut(s)	379, 1294, 2154
EcoT38I	GRGCYC	2 cut(s)	1056, 1604
ErhI	CCWWGG	2 cut(s)	955, 1353
Esp3I	CGTCTC	3 cut(s)	830, 1323, 2027
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FaqI	GGGAC	4 cut(s)	86, 452, 1174, 1286
FauI	CCCGC	1 cut(s)	2449
FauNDI	CATATG	1 cut(s)	1344
Fnu4HI	GCNGC	3 cut(s)	42, 270, 2000
FokI	GGATG	7 cut(s)	656, 898, 1565, 1613, 1630, 1922, 2051
FriOI	GRGCYC	2 cut(s)	1056, 1604
Fsp4HI	GCNGC	3 cut(s)	42, 270, 2000
FspBI	CTAG	4 cut(s)	263, 552, 1001, 2426
GlaI	GCGC	1 cut(s)	178
GluI	GCNGC	3 cut(s)	42, 270, 2000
GsuI	CTGGAG	3 cut(s)	703, 1730, 1795
HaeII	RGCGCY	1 cut(s)	180
HaeIII	GGCC	5 cut(s)	312, 1039, 1577, 2019, 2286
HapII	CCGG	6 cut(s)	207, 313, 321, 2249, 2287, 2543
HgaI	GACGC	2 cut(s)	1340, 2254
HhaI	GCGC	1 cut(s)	179
Hin1I	GRCGYC	1 cut(s)	2246
Hin6I	GCGC	1 cut(s)	177
HinP1I	GCGC	1 cut(s)	177
HincII	GTYRAC	1 cut(s)	1469
HindII	GTYRAC	1 cut(s)	1469
HindIII	AAGCTT	3 cut(s)	573, 1217, 2636
HpaII	CCGG	6 cut(s)	207, 313, 321, 2249, 2287, 2543
HphI	GGTGA	6 cut(s)	671, 686, 714, 1190, 1799, 1883
Hpy166II	GTNNAC	3 cut(s)	229, 1469, 1781
Hpy8I	GTNNAC	3 cut(s)	229, 1469, 1781
HpyAV	CCTTC	8 cut(s)	359, 735, 885, 989, 1745, 1862, 2045, 2084
HpyCH4IV	ACGT	1 cut(s)	1439
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 47, 1802, 2315
HpyF3I	CTNAG	6 cut(s)	232, 901, 947, 1204, 2344, 2481
HpySE526I	ACGT	1 cut(s)	1439
Hsp92I	GRCGYC	1 cut(s)	2246
HspAI	GCGC	1 cut(s)	177
Kzo9I	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
LguI	GCTCTTC	1 cut(s)	186
LmnI	GCTCC	9 cut(s)	47, 684, 709, 1051, 1408, 1711, 1755, 2242, 2353
Lsp1109I	GCAGC	3 cut(s)	28, 281, 2011
LweI	GCATC	4 cut(s)	251, 256, 386, 2420
MabI	ACCWGGT	1 cut(s)	2311
MaeI	CTAG	4 cut(s)	263, 552, 1001, 2426
MaeII	ACGT	1 cut(s)	1439
MaeIII	GTNAC	8 cut(s)	415, 545, 904, 979, 1178, 1622, 2205, 2459
MalI	GATC	9 cut(s)	27, 663, 798, 1686, 1692, 1839, 2133, 2377, 2487
MbiI	CCGCTC	1 cut(s)	2170
MboI	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
MfeI	CAATTG	2 cut(s)	1033, 2352
MflI	RGATCY	5 cut(s)	25, 796, 1837, 2131, 2375
MhlI	GDGCHC	3 cut(s)	1056, 1604, 1783
MlyI	GAGTC	7 cut(s)	224, 775, 1370, 1474, 1567, 2411, 2438
MmeI	TCCRAC	1 cut(s)	1748
Mph1103I	ATGCAT	3 cut(s)	379, 1294, 2154
MroXI	GAANNNNTTC	2 cut(s)	1283, 2299
MseI	TTAA	7 cut(s)	456, 1080, 1442, 1452, 1916, 1989, 2522
MslI	CAYNNNNRTG	3 cut(s)	495, 1347, 1742
MspA1I	CMGCKG	1 cut(s)	968
MspI	CCGG	6 cut(s)	207, 313, 321, 2249, 2287, 2543
MspR9I	CCNGG	5 cut(s)	38, 314, 716, 2313, 2543
MunI	CAATTG	2 cut(s)	1033, 2352
Mva1269I	GAATGC	4 cut(s)	32, 220, 1354, 1710
MvaI	CCWGG	3 cut(s)	38, 716, 2313
MwoI	GCNNNNNNNGC	4 cut(s)	38, 47, 1802, 2315
NciI	CCSGG	2 cut(s)	314, 2543
NcoI	CCATGG	1 cut(s)	1353
NdeI	CATATG	1 cut(s)	1344
NdeII	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
NlaIV	GGNNCC	5 cut(s)	440, 1040, 1410, 2133, 2377
NmeAIII	GCCGAG	1 cut(s)	908
NmuCI	GTSAC	3 cut(s)	415, 979, 1178
NsiI	ATGCAT	3 cut(s)	379, 1294, 2154
NspI	RCATGY	3 cut(s)	980, 1573, 1933
PagI	TCATGA	1 cut(s)	1687
PciI	ACATGT	1 cut(s)	1929
PciSI	GCTCTTC	1 cut(s)	186
PcsI	WCGNNNNNNNCGW	1 cut(s)	1272
PctI	GAATGC	4 cut(s)	32, 220, 1354, 1710
PdmI	GAANNNNTTC	2 cut(s)	1283, 2299
PfeI	GAWTC	6 cut(s)	123, 719, 812, 1279, 1666, 1760
PflMI	CCANNNNNTGG	3 cut(s)	91, 173, 1048
PkrI	GCNGC	3 cut(s)	43, 271, 2001
PleI	GAGTC	7 cut(s)	224, 775, 1369, 1473, 1566, 2410, 2437
PpsI	GAGTC	7 cut(s)	224, 775, 1369, 1473, 1566, 2410, 2437
PscI	ACATGT	1 cut(s)	1929
PsiI	TTATAA	1 cut(s)	2333
Psp124BI	GAGCTC	1 cut(s)	1056
Psp6I	CCWGG	3 cut(s)	36, 714, 2311
PspGI	CCWGG	3 cut(s)	36, 714, 2311
PspN4I	GGNNCC	5 cut(s)	440, 1040, 1410, 2133, 2377
PspPI	GGNCC	3 cut(s)	204, 439, 1038
PstI	CTGCAG	3 cut(s)	46, 1148, 2419
PsuI	RGATCY	5 cut(s)	25, 796, 1837, 2131, 2375
PvuII	CAGCTG	1 cut(s)	968
RsaI	GTAC	7 cut(s)	139, 157, 593, 973, 1642, 1829, 2043
RsaNI	GTAC	7 cut(s)	138, 156, 592, 972, 1641, 1828, 2042
RseI	CAYNNNNRTG	3 cut(s)	495, 1347, 1742
SacI	GAGCTC	1 cut(s)	1056
SapI	GCTCTTC	1 cut(s)	186
SaqAI	TTAA	7 cut(s)	456, 1080, 1442, 1452, 1916, 1989, 2522
SatI	GCNGC	3 cut(s)	42, 270, 2000
Sau3AI	GATC	9 cut(s)	25, 661, 796, 1684, 1690, 1837, 2131, 2375, 2485
Sau96I	GGNCC	3 cut(s)	204, 439, 1038
SchI	GAGTC	7 cut(s)	224, 775, 1370, 1474, 1567, 2411, 2438
ScrFI	CCNGG	5 cut(s)	38, 314, 716, 2313, 2543
SduI	GDGCHC	3 cut(s)	1056, 1604, 1783
SexAI	ACCWGGT	1 cut(s)	2311
SfaNI	GCATC	4 cut(s)	251, 256, 386, 2420
SfcI	CTRYAG	5 cut(s)	42, 636, 933, 1144, 2415
SinI	GGWCC	2 cut(s)	204, 439
SmiMI	CAYNNNNRTG	3 cut(s)	495, 1347, 1742
SmlI	CTYRAG	5 cut(s)	151, 833, 1055, 2030, 2272
SmoI	CTYRAG	5 cut(s)	151, 833, 1055, 2030, 2272
SsiI	CCGC	2 cut(s)	2170, 2456
SspI	AATATT	2 cut(s)	1395, 1987
SspMI	CTAG	4 cut(s)	263, 552, 1001, 2426
SstI	GAGCTC	1 cut(s)	1056
StyD4I	CCNGG	5 cut(s)	36, 312, 714, 2311, 2541
StyI	CCWWGG	2 cut(s)	955, 1353
TaiI	ACGT	1 cut(s)	1442
TaqI	TCGA	1 cut(s)	1941
TatI	WGTACW	4 cut(s)	137, 155, 591, 2041
TfiI	GAWTC	6 cut(s)	123, 719, 812, 1279, 1666, 1760
Tru1I	TTAA	7 cut(s)	456, 1080, 1442, 1452, 1916, 1989, 2522
Tru9I	TTAA	7 cut(s)	456, 1080, 1442, 1452, 1916, 1989, 2522
TscAI	CASTG	7 cut(s)	240, 292, 426, 1104, 1231, 1749, 1927
TseFI	GTSAC	3 cut(s)	415, 979, 1178
TseI	GCWGC	3 cut(s)	41, 269, 1999
Tsp45I	GTSAC	3 cut(s)	415, 979, 1178
TspGWI	ACGGA	4 cut(s)	854, 1007, 1636, 2051
TspRI	CASTG	7 cut(s)	240, 292, 426, 1104, 1231, 1749, 1927
Van91I	CCANNNNNTGG	3 cut(s)	91, 173, 1048
VneI	GTGCAC	1 cut(s)	1779
VpaK11BI	GGWCC	2 cut(s)	204, 439
XapI	RAATTY	5 cut(s)	525, 650, 677, 2024, 2606
XceI	RCATGY	3 cut(s)	980, 1573, 1933
XmnI	GAANNNNTTC	2 cut(s)	1283, 2299
XspI	CTAG	4 cut(s)	263, 552, 1001, 2426
Zsp2I	ATGCAT	3 cut(s)	379, 1294, 2154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.