Rmu_sc0002636.1_g000035

Villin-4-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002636.1
Physical Location & Seq
Forward (+)
132788 .. 138915
6128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002636.1_g000035.1.cds

Sequence Viewer

Length: 2052 bp
atggctgtttccatgagagatttggatccagctttccacggagctggacaaaaggctggactcgaaatatggcgcattgaaaactttcatcctgttattgtcccacaatcctctcatggaaagttttttatgggggactcttatgtgatcttgaaaacaacagcttcaaaaagtggtgccttgcgacatgatatccattattggcttggtaaagatacttctcaggatgaagcaggcactgcagccattaagacagttgaattagatgcagctcttggaggacgtgctgttcagtatcgtgaagtacagggtcatgaaactgctaaatttctatcttatttcaaaccgtgtatcatacctcaagaaggtggaattgcttctgggtttaaacatgctgaggctgaagaacatacaacgcggttgtttgtttgcaaaggaaaacatgtcgtccatgtcaaagaggtttcttttgctcgatcttcactcaaccacgacgacatttttgttctggataccaagtctaaaatttttcagtttaatggttccaactcatccattcaagaaagggcaaaggctttagaagttgtccagtacattaaagacacgtttcacgacgggaagtgtgacatagcttccattgaggatggaaagttgatggctgatgctgatactggagaattctgggctttatttggtggttttgctccacttccgaagaaaacagcgaatgatgaggacaaaatttttgattctcatagtactaagctacttcgcgttgagaaagagaaggcagaaccagttgaggctgattctttgacaagggaattactagaaacaaataagtgctatcttctagattgtgggctggagttgtttgtttggatggggagaaacacatcgcttgatgaaaggaggagcgcaagtggagctgccgaagagttgctacgtggtcctgatcgttctaaatcccatatgattcgtgttattgagggattcgagacggtaatgttcaagtccaaatttgattcatggcctcaaacagttgaagtagctgtgtcagaggatggtcggggcaaggttgcagcacttctaaagcgtcaaggggttaatgtgaagggtctgttgaaagctgatcctgtaaaagaagaacctcaaccatacatcgattgcacaggaaatctgctggtttggcgagtgaatggccaggaaaagattcttcttcctgcttctgatcagtcaaaaatttatagtggagattgctatatcttccagtactcgtatccaggagaagataaagaagaacaccttataggaacatggtttggaaagcagagtattgaggaagaaagagcatcagctatttcacttgcaagcaagatggttgagtcattgaagtttctgccagcccaggcacgtatctatgaaggaaatgaaccaattcagttctattcaatcttccaaagcttaattgttctgaagggtggtctaagtgatgggtataaaaagtatgttgcggagaaggaagttccagatgagacatatcaagaagatggtgttgctttatttcgtgtccagggatctggacctgataatatgcaagcaattcaagttgaagcagttgcatcatctttgaattcctcgtactgttatatattacacagtggctcaactgtctttacatggtctggaagccttgcaaccgcagatgatcaggaacttgttgagaggcagctggatctaataaagccaaatcttcagtcgaaaccacaaaaggaaaataccgaatctgaacagttttgggatttgttaggaggaaaggccgagtatcccagccaaaaaattgtaagagatgcagaaagtgatcctcgcctattttcttgcatcttctcaaatgagaatttaaaggtagtggagatatacaatttcacccaggacgatttgatgactgaagatatgttcatcttggattgtcacactgatatctttgtttgggttggccaagaagtcaactccaaggataaaatgcatgctttaactattggggaggtatga
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

683

Amino Acids

76.42

Weight (kDa)

5.15

Isoelectric Point (pI)

35.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 176
AccII CGCG 2 cut(s) 418, 774
AciI CCGC 3 cut(s) 418, 1514, 1701
AclWI GGATC 6 cut(s) 20, 33, 1127, 1585, 1743, 1856
AcoI YGGCCR 2 cut(s) 1201, 1996
AcsI RAATTY 8 cut(s) 326, 525, 677, 741, 1019, 1242, 1633, 1897
AcuI CTGAAG 4 cut(s) 423, 1496, 1739, 1968
AfaI GTAC 5 cut(s) 306, 593, 760, 1274, 1643
AfiI CCNNNNNNNGG 1 cut(s) 365
AflIII ACRYGT 2 cut(s) 442, 603
AjiI CACGTC 1 cut(s) 284
AjnI CCWGG 5 cut(s) 1203, 1282, 1407, 1572, 1929
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
Alw26I GTCTC 2 cut(s) 992, 1529
AlwI GGATC 6 cut(s) 20, 33, 1127, 1585, 1743, 1856
AlwNI CAGNNNCTG 1 cut(s) 239
AoxI GGCC 4 cut(s) 1031, 1201, 1818, 1996
ApeKI GCWGC 5 cut(s) 242, 269, 929, 1082, 1729
ApoI RAATTY 8 cut(s) 326, 525, 677, 741, 1019, 1242, 1633, 1897
ArsI GACNNNNNNTTYG 6 cut(s) 485, 517, 728, 760, 1742, 1774
Asp700I GAANNNNTTC 4 cut(s) 84, 376, 1212, 1437
AspLEI GCGC 2 cut(s) 75, 920
AspS9I GGNCC 2 cut(s) 950, 1583
AsuHPI GGTGA 1 cut(s) 1918
AvaII GGWCC 2 cut(s) 950, 1583
BalI TGGCCA 2 cut(s) 1203, 1998
BamHI GGATCC 1 cut(s) 25
BanI GGYRCC 1 cut(s) 176
BarI GAAGNNNNNNTAC 4 cut(s) 202, 234, 927, 959
BbvCI CCTCAGC 1 cut(s) 396
BbvI GCAGC 5 cut(s) 254, 281, 916, 1094, 1741
BccI CCATC 7 cut(s) 638, 649, 877, 1058, 1372, 1487, 1544
BciT130I CCWGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
BciVI GTATCC 3 cut(s) 505, 1290, 1836
BclI TGATCA 2 cut(s) 1231, 1708
BcoDI GTCTC 2 cut(s) 992, 1529
BfaI CTAG 2 cut(s) 830, 854
BfmI CTRYAG 1 cut(s) 240
BfuI GTATCC 3 cut(s) 505, 1290, 1836
BisI GCNGC 5 cut(s) 243, 270, 930, 1083, 1730
BlsI GCNGC 5 cut(s) 244, 271, 931, 1084, 1731
BmcAI AGTACT 2 cut(s) 760, 1274
Bme1390I CCNGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
Bme18I GGWCC 2 cut(s) 950, 1583
BmgBI CACGTC 1 cut(s) 284
BmgT120I GGNCC 2 cut(s) 950, 1583
BmiI GGNNCC 3 cut(s) 27, 178, 544
BmrFI CCNGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
BmsI GCATC 6 cut(s) 256, 652, 1361, 1631, 1840, 1890
BpmI CTGGAG 2 cut(s) 693, 887
Bpu10I CCTNAGC 1 cut(s) 396
BpuEI CTTGAG 1 cut(s) 345
Bsa29I ATCGAT 1 cut(s) 1164
BsaAI YACGTR 2 cut(s) 947, 1415
BsaBI GATNNNNATC 1 cut(s) 24
BsaJI CCNNGG 5 cut(s) 37, 1407, 1573, 1929, 2013
BsaXI ACNNNNNCTCC 2 cut(s) 907, 937
Bsc4I CCNNNNNNNGG 1 cut(s) 365
Bse1I ACTGG 4 cut(s) 589, 676, 797, 1270
Bse8I GATNNNNATC 1 cut(s) 24
BseBI CCWGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
BseCI ATCGAT 1 cut(s) 1164
BseDI CCNNGG 5 cut(s) 37, 1407, 1573, 1929, 2013
BseGI GGATG 6 cut(s) 88, 232, 551, 649, 888, 1069
BseJI GATNNNNATC 1 cut(s) 24
BseLI CCNNNNNNNGG 1 cut(s) 365
BseMII CTCAG 2 cut(s) 236, 387
BseNI ACTGG 4 cut(s) 589, 676, 797, 1270
BseRI GAGGAG 1 cut(s) 928
BseXI GCAGC 5 cut(s) 254, 281, 916, 1094, 1741
BseYI CCCAGC 1 cut(s) 1829
Bsh1236I CGCG 2 cut(s) 418, 774
BshFI GGCC 4 cut(s) 1033, 1203, 1820, 1998
BshNI GGYRCC 1 cut(s) 176
BshVI ATCGAT 1 cut(s) 1164
BslFI GGGAC 2 cut(s) 86, 149
BslI CCNNNNNNNGG 1 cut(s) 365
BsmAI GTCTC 2 cut(s) 992, 1529
BsmBI CGTCTC 1 cut(s) 992
BsmFI GGGAC 2 cut(s) 86, 149
BsnI GGCC 4 cut(s) 1033, 1203, 1820, 1998
BspACI CCGC 3 cut(s) 418, 1514, 1701
BspANI GGCC 4 cut(s) 1033, 1203, 1820, 1998
BspCNI CTCAG 2 cut(s) 235, 388
BspDI ATCGAT 1 cut(s) 1164
BspFNI CGCG 2 cut(s) 418, 774
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 3 cut(s) 27, 178, 544
BspMAI CTGCAG 1 cut(s) 244
BspPI GGATC 6 cut(s) 20, 33, 1127, 1585, 1743, 1856
BspT107I GGYRCC 1 cut(s) 176
BsrI ACTGG 4 cut(s) 589, 676, 797, 1270
BssECI CCNNGG 5 cut(s) 37, 1407, 1573, 1929, 2013
BssT1I CCWWGG 1 cut(s) 2013
Bst2UI CCWGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
Bst4CI ACNGT 8 cut(s) 256, 348, 1003, 1042, 1646, 1661, 1672, 1794
Bst6I CTCTTC 1 cut(s) 930
BstAPI GCANNNNNTGC 1 cut(s) 239
BstBAI YACGTR 2 cut(s) 947, 1415
BstC8I GCNNGC 5 cut(s) 235, 1372, 1404, 1599, 2028
BstDEI CTNAG 4 cut(s) 222, 396, 762, 1487
BstDSI CCRYGG 1 cut(s) 37
BstENI CCTNNNNNAGG 1 cut(s) 363
BstF5I GGATG 6 cut(s) 88, 232, 551, 649, 888, 1069
BstFNI CGCG 2 cut(s) 418, 774
BstHHI GCGC 2 cut(s) 75, 920
BstMAI GTCTC 2 cut(s) 992, 1529
BstMWI GCNNNNNNNGC 3 cut(s) 239, 926, 1189
BstNI CCWGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
BstNSI RCATGY 3 cut(s) 395, 446, 2030
BstSCI CCNGG 5 cut(s) 1203, 1282, 1407, 1572, 1929
BstSFI CTRYAG 1 cut(s) 240
BstUI CGCG 2 cut(s) 418, 774
BstV1I GCAGC 5 cut(s) 254, 281, 916, 1094, 1741
BstX2I RGATCY 3 cut(s) 25, 1577, 1735
BstXI CCANNNNNNTGG 2 cut(s) 44, 1580
BstYI RGATCY 3 cut(s) 25, 1577, 1735
Bsu15I ATCGAT 1 cut(s) 1164
BsuI GTATCC 3 cut(s) 505, 1290, 1836
BsuRI GGCC 4 cut(s) 1033, 1203, 1820, 1998
BsuTUI ATCGAT 1 cut(s) 1164
BtgI CCRYGG 1 cut(s) 37
BtgZI GCGATG 1 cut(s) 882
BtrI CACGTC 1 cut(s) 284
BtsCI GGATG 6 cut(s) 88, 232, 551, 649, 888, 1069
BtsI GCAGTG 1 cut(s) 237
BtsIMutI CAGTG 3 cut(s) 237, 1666, 1974
Cac8I GCNNGC 5 cut(s) 235, 1372, 1404, 1599, 2028
CaiI CAGNNNCTG 1 cut(s) 239
CciI TCATGA 1 cut(s) 313
CfoI GCGC 2 cut(s) 75, 920
Cfr13I GGNCC 2 cut(s) 950, 1583
ClaI ATCGAT 1 cut(s) 1164
CseI GACGC 1 cut(s) 1085
Csp6I GTAC 5 cut(s) 305, 592, 759, 1273, 1642
CviQI GTAC 5 cut(s) 305, 592, 759, 1273, 1642
DdeI CTNAG 4 cut(s) 222, 396, 762, 1487
DraI TTTAAA 2 cut(s) 388, 1902
EaeI YGGCCR 2 cut(s) 1201, 1996
Eam1104I CTCTTC 1 cut(s) 930
EarI CTCTTC 1 cut(s) 930
Eco130I CCWWGG 1 cut(s) 2013
Eco32I GATATC 2 cut(s) 193, 1981
Eco47I GGWCC 2 cut(s) 950, 1583
Eco57I CTGAAG 4 cut(s) 423, 1496, 1739, 1968
EcoNI CCTNNNNNAGG 1 cut(s) 363
EcoRI GAATTC 2 cut(s) 677, 1633
EcoRII CCWGG 5 cut(s) 1203, 1282, 1407, 1572, 1929
EcoRV GATATC 2 cut(s) 193, 1981
EcoT14I CCWWGG 1 cut(s) 2013
EcoT22I ATGCAT 1 cut(s) 2028
ErhI CCWWGG 1 cut(s) 2013
Esp3I CGTCTC 1 cut(s) 992
FalI AAGNNNNNCTT 2 cut(s) 1290, 1322
FaqI GGGAC 2 cut(s) 86, 149
FauNDI CATATG 1 cut(s) 972
FbaI TGATCA 2 cut(s) 1231, 1708
Fnu4HI GCNGC 5 cut(s) 243, 270, 930, 1083, 1730
FokI GGATG 6 cut(s) 75, 239, 538, 656, 895, 1076
Fsp4HI GCNGC 5 cut(s) 243, 270, 930, 1083, 1730
FspBI CTAG 2 cut(s) 830, 854
GlaI GCGC 2 cut(s) 74, 919
GluI GCNGC 5 cut(s) 243, 270, 930, 1083, 1730
GsaI CCCAGC 1 cut(s) 1833
GsuI CTGGAG 2 cut(s) 693, 887
HaeIII GGCC 4 cut(s) 1033, 1203, 1820, 1998
HgaI GACGC 1 cut(s) 1085
HhaI GCGC 2 cut(s) 75, 920
Hin6I GCGC 2 cut(s) 73, 918
HinP1I GCGC 2 cut(s) 73, 918
HincII GTYRAC 1 cut(s) 2008
HindII GTYRAC 1 cut(s) 2008
HindIII AAGCTT 1 cut(s) 1462
HphI GGTGA 1 cut(s) 1918
Hpy166II GTNNAC 1 cut(s) 2008
Hpy188I TCNGA 5 cut(s) 714, 1060, 1231, 1476, 1789
Hpy8I GTNNAC 1 cut(s) 2008
Hpy99I CGWCG 2 cut(s) 497, 617
HpyAV CCTTC 6 cut(s) 359, 781, 1108, 1418, 1471, 1513
HpyCH4III ACNGT 8 cut(s) 256, 348, 1003, 1042, 1646, 1661, 1672, 1794
HpyCH4IV ACGT 4 cut(s) 283, 605, 946, 1414
HpyF10VI GCNNNNNNNGC 3 cut(s) 239, 926, 1189
HpyF3I CTNAG 4 cut(s) 222, 396, 762, 1487
HpySE526I ACGT 4 cut(s) 283, 605, 946, 1414
HspAI GCGC 2 cut(s) 73, 918
Ksp22I TGATCA 2 cut(s) 1231, 1708
LmnI GCTCC 4 cut(s) 41, 709, 915, 926
Lsp1109I GCAGC 5 cut(s) 254, 281, 916, 1094, 1741
LweI GCATC 6 cut(s) 256, 652, 1361, 1631, 1840, 1890
MaeI CTAG 2 cut(s) 830, 854
MaeII ACGT 4 cut(s) 283, 605, 946, 1414
MaeIII GTNAC 2 cut(s) 623, 1970
MflI RGATCY 3 cut(s) 25, 1577, 1735
MlsI TGGCCA 2 cut(s) 1203, 1998
MluNI TGGCCA 2 cut(s) 1203, 1998
MlyI GAGTC 3 cut(s) 54, 131, 1394
MmeI TCCRAC 1 cut(s) 570
Mox20I TGGCCA 2 cut(s) 1203, 1998
Mph1103I ATGCAT 1 cut(s) 2028
MroXI GAANNNNTTC 4 cut(s) 84, 376, 1212, 1437
MscI TGGCCA 2 cut(s) 1203, 1998
MseI TTAA 8 cut(s) 249, 387, 537, 597, 1107, 1466, 1901, 2033
Msp20I TGGCCA 2 cut(s) 1203, 1998
MspA1I CMGCKG 1 cut(s) 1732
MspR9I CCNGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
MssI GTTTAAAC 1 cut(s) 388
MvaI CCWGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
MvnI CGCG 2 cut(s) 418, 774
MwoI GCNNNNNNNGC 3 cut(s) 239, 926, 1189
NdeI CATATG 1 cut(s) 972
NlaIV GGNNCC 3 cut(s) 27, 178, 544
NmeAIII GCCGAG 1 cut(s) 1846
NmuCI GTSAC 2 cut(s) 623, 1970
NsiI ATGCAT 1 cut(s) 2028
NspI RCATGY 3 cut(s) 395, 446, 2030
PaeI GCATGC 1 cut(s) 2030
PagI TCATGA 1 cut(s) 313
PciI ACATGT 1 cut(s) 442
PdmI GAANNNNTTC 4 cut(s) 84, 376, 1212, 1437
PfeI GAWTC 7 cut(s) 749, 809, 976, 993, 1025, 1213, 1784
PfoI TCCNGGA 1 cut(s) 1282
PkrI GCNGC 5 cut(s) 244, 271, 931, 1084, 1731
PleI GAGTC 3 cut(s) 54, 131, 1393
PmeI GTTTAAAC 1 cut(s) 388
PpsI GAGTC 3 cut(s) 54, 131, 1393
Ppu21I YACGTR 2 cut(s) 947, 1415
PscI ACATGT 1 cut(s) 442
Psp6I CCWGG 5 cut(s) 1203, 1282, 1407, 1572, 1929
PspFI CCCAGC 1 cut(s) 1829
PspGI CCWGG 5 cut(s) 1203, 1282, 1407, 1572, 1929
PspN4I GGNNCC 3 cut(s) 27, 178, 544
PspPI GGNCC 2 cut(s) 950, 1583
PstI CTGCAG 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 239
PsuI RGATCY 3 cut(s) 25, 1577, 1735
PvuII CAGCTG 1 cut(s) 1732
RsaI GTAC 5 cut(s) 306, 593, 760, 1274, 1643
RsaNI GTAC 5 cut(s) 305, 592, 759, 1273, 1642
SaqAI TTAA 8 cut(s) 249, 387, 537, 597, 1107, 1466, 1901, 2033
SatI GCNGC 5 cut(s) 243, 270, 930, 1083, 1730
Sau96I GGNCC 2 cut(s) 950, 1583
ScaI AGTACT 2 cut(s) 760, 1274
SchI GAGTC 3 cut(s) 54, 131, 1394
ScrFI CCNGG 5 cut(s) 1205, 1284, 1409, 1574, 1931
SfaNI GCATC 6 cut(s) 256, 652, 1361, 1631, 1840, 1890
SfcI CTRYAG 1 cut(s) 240
SinI GGWCC 2 cut(s) 950, 1583
SmlI CTYRAG 1 cut(s) 360
SmoI CTYRAG 1 cut(s) 360
SphI GCATGC 1 cut(s) 2030
SsiI CCGC 3 cut(s) 418, 1514, 1701
SspMI CTAG 2 cut(s) 830, 854
StyD4I CCNGG 5 cut(s) 1203, 1282, 1407, 1572, 1929
StyI CCWWGG 1 cut(s) 2013
TaaI ACNGT 8 cut(s) 256, 348, 1003, 1042, 1646, 1661, 1672, 1794
TaiI ACGT 4 cut(s) 286, 608, 949, 1417
TaqI TCGA 5 cut(s) 63, 475, 996, 1164, 1760
TatI WGTACW 4 cut(s) 304, 591, 758, 1272
TfiI GAWTC 7 cut(s) 749, 809, 976, 993, 1025, 1213, 1784
Tru1I TTAA 8 cut(s) 249, 387, 537, 597, 1107, 1466, 1901, 2033
Tru9I TTAA 8 cut(s) 249, 387, 537, 597, 1107, 1466, 1901, 2033
TscAI CASTG 3 cut(s) 244, 1666, 1981
TseFI GTSAC 2 cut(s) 623, 1970
TseI GCWGC 5 cut(s) 242, 269, 929, 1082, 1729
Tsp45I GTSAC 2 cut(s) 623, 1970
TspDTI ATGAA 8 cut(s) 77, 243, 330, 921, 1017, 1437, 1446, 1948
TspGWI ACGGA 1 cut(s) 54
TspRI CASTG 3 cut(s) 244, 1666, 1981
VpaK11BI GGWCC 2 cut(s) 950, 1583
XagI CCTNNNNNAGG 1 cut(s) 363
XapI RAATTY 8 cut(s) 326, 525, 677, 741, 1019, 1242, 1633, 1897
XbaI TCTAGA 1 cut(s) 853
XceI RCATGY 3 cut(s) 395, 446, 2030
XcmI CCANNNNNNNNNTGG 2 cut(s) 19, 203
XmnI GAANNNNTTC 4 cut(s) 84, 376, 1212, 1437
XspI CTAG 2 cut(s) 830, 854
ZrmI AGTACT 2 cut(s) 760, 1274
Zsp2I ATGCAT 1 cut(s) 2028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.