Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007391

Physical Location & Seq

Genomic Coordinates Forward (+)

68838976 .. 68846370

Gene Structure 7395 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG494600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGTCTATCTATGCTAAAGATACAGATCCAGCATTCCAGGCTGCAGGAGCAAAGCTTGGCTTGGAAATTTGGTGCGTTGAGAACCAAAAATTGGTTTCTGTCCCGACACCTTCACATGGGAGATTCTATTCTGGGAGTGCATATCTAGTCCTGAGTACATTTCTGCCAAAAAGTGGCCTTCCTCAGCATGACATACACTATTGGACTGGAAAGAATGCAAATAAGGTGGACTCAGCGTTGGCATCAGATAAAGCACTTGAACTAGATGCAGCCCTTGGGTCCTGCGCTGTGCAGTATATGGAAATTCAAGGCCAGGAAACTCGAAAGTTTTTGTCATATTTCAAACCCTGTATTATACCCATTGAAGGAGTATATGCATCACAGCAAGACCACATAAAAAGAGAAACATATAAAGTCACCTTGTTAGCTTGCAAAGGGGACCATGTTGTTCATGTTAAAGAAGTGCCTTTTTCTCGTTCATCGTTGAACCACAATGATGTATTCATACTTGATACTGCCTCAAAAATTTTCCTCTTTAGTGGGTGCAACTCTAGCATACAAGAAAGAGCAAAAGCTTTGGAGGTTGTCCAGTACATCAATGAGAATAAACATTGTGGAAACTGTGAGGTGGCAACTGTAGAGGATGGAAAATTGGTTGGCGATCCTGATGTGGGTGAATTCTGGAGCTTATTTGGTGGTTATGCTCCCATTCCCCAGGATTCACCTTCTCCTGTTCAGAAACAATCTGAAGCACCCTTTGTGAAACTTTCATGGATAATGACTCAGGGTAAATTAGGTCCATGCCAAACTGATTCATTAAGTAAAGAAATGCTTGAGACGGACAAATGCTATATGCTGGACTGTGATTCAGAAATTTTTGTTTGGATGGGAAGGCATACCTCAGTTACAGAAAGGAAAACATCAATCTCAGCTACAGAAGGATTCCTCAGAAACCAAGGCAGGTCAGCTGGTACTCATGTGACTTCCATAACTGAAGGGTTAGAAACTGCCAAGTTTAGGTCATATTTTGATAATTGGCCTCAAACAGTGGAGCTCAAGCTGTATGAAGAAGGTCGAGATAAAGTAGCAGCAATGTTCAAGCACCAAGGTTATGAAGTGAAAGAGCTACCTGATGAAGAAGATATCCAGCCATTTATAGATTGCAGAGGCACATTGAAAGTTTGGTGGGTAGATGGTGATAGACTGTCCCTTGTTCCAGCCTCAGAACAAAGAAAGCTTTTCAGTGGGGATTGCTACATTCTGCAATATACATATCTTGGCAACGAAAGGGATGAGAATCTATTTTATGCATGGCTTGGTGGTGGGAGTGTAATGGAAGATAGAACAGATACTATCTGTCAAATGAATGCCATAGTTGAGTCAAGCAGGGGGAATCCTGTTGTTGCTCAGATTAAGGAGAACAAGGAACCATCTCAATTTTTTTCAATTTTACAGACATTAATTGTTTTTAAGGGAGGTAGGAGTCAACGATACAAGAAGTTTGTGGCAGAAAAGGGTATTGCAGATGAAACTTATGATGAAAGCAAGACAGCTCTTTTTCGTATTCAAGGGACAAGTCCTAACAACATGCAGGCCATCCAAGTTGATACAGTTTCGGGCTCTTTGAACTCTTCCTATTGTTACATCCTGCAAACTGGTACATCTGTTGTCACTTGGATTGGGAATCTCTCGTCGAGCAGAGATCATGATCTTCTTGACAGAATGCTGGAGCTAATAAATCCAACATGGCAAGCCATATCAGTCAGGGAAGGGAGTGAATCTGATGTTTTCTGGAGTGCACTTGGTGATAAGACAGAGTATGCAAGAGGAAAAGAAATAAAAGGATACATAGATGATCCACATTTATTTATGTTGAGCGGAATTGAAGGTGATTTCAAGGTGCAAGAGATATACAATTTCACACAGGATGATTTAAATACTGAAGACGTGTTAGTCCTCAACTGCCACATAGAGATATATGTCTGGATTGGAAGCCACTCAAATATTAAGTCAAAGCAACAAGCCCTTACTCTTGGCCTGAAATTTCTTGAGACCGATGTACTTGTGGAAGGGCTATCTTTGGAAACTCCTATATATGTTGTTAGTGAAGGGCATGAACCACCATTTTTCACTCGTTTCTTTGAATGGGATCCCTCAAAATCAAATATGCATGGCAACTCATTTGAGAGAAAACTTGCGATTCTGAAAGGAAAACCACAACAGTTAGAAGCACCAATAAGAAACTCATGGAAAGCTTTATCCAGGGAGACGACCCCGGATAGTTTGAGAAGCAAGTCCATGAGTTCCAATGGCCGGAGAAGAAGTTTTTCTCCTGCACCTGGTGTTTCATTTCCAATCATAAAGTCCGGCTCAACTCCAATTGCTGGTGTTTCATTTCCAATCATAAAGTCCAACTCAACTCCAATTGTCAGGAAACTCTTTAGAGGATCCTCTCTGAATGGTAGTCCTGATGGGTCATTCACATCTGCAGGTTCCCCAGAATCGGAGGAAAAGTTATCTAAAAATGCGGGTAACATTCAGGCTGATGGAACTGAGGATGACATAAATCTGTTAGTATATCCATACGAACGACTAACTGTCAATTCTAAAGACCCGGAAACCAGCATAGACATAACCAAAAGAGAGGCATATCTATCTGAAGAAGAGTTCAAAGTGAAATTTGGCATGACTAAACGAGACTTCTACAAGCTTCCCAAGTGGAAACAAAACAAGCAGAAGATGGCGCTTCATCTTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010639 GO:0015629 GO:0016043 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

919

Amino Acids

103.11

Weight (kDa)

5.63

Isoelectric Point (pI)

43.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	29 - 111	1.5e-09	Gelsolin repeat
Gelsolin	PF00626	149 - 217	6.4e-12	Gelsolin repeat
Gelsolin	PF00626	271 - 339	9.8e-08	Gelsolin repeat
Gelsolin	PF00626	633 - 710	4.3e-09	Gelsolin repeat
VHP	PF02209	884 - 919	1.4e-14	Villin headpiece domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007391)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29890 AT2G29890 AT2G29890 AT2G29890 AT2G29890
fragaria_vesca	FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450 FvH4_3g38450
malus_domestica	MD03G1071900.v1.1
prunus_persica	Prupe.6G058500_v2.0.a1
pyrus_communis	pycom03g05810
rosa_chinensis	RchiOBHm_Chr5g0069141
rosa_laevigata	RLG00000036039
rosa_multiflora	Rmu_sc0000936.1_g000012
rosa_roxburghii	Rroxscaffold_1G00011650
rosa_rugosa	Rorug05G0396200
rosa_samantha	Rh5BG472200 Rh5CG494600 Rh5DG484600
rosa_wichuraiana	Rw0G006050 Rw5G042310

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1952
Acc36I	ACCTGC	2 cut(s)	951, 2480
AccB7I	CCANNNNNTGG	3 cut(s)	91, 173, 2384
AccBSI	CCGCTC	1 cut(s)	1878
AciI	CCGC	2 cut(s)	1878, 2528
AclWI	GGATC	7 cut(s)	20, 656, 1850, 2144, 2157, 2442, 2455
AcoI	YGGCCR	1 cut(s)	2311
AcsI	RAATTY	7 cut(s)	66, 303, 525, 677, 873, 2042, 2678
AcuI	CTGAAG	4 cut(s)	768, 1014, 1962, 2679
AdeI	CACNNNGTG	2 cut(s)	1805, 2342
AfaI	GTAC	5 cut(s)	157, 593, 973, 1660, 2061
AflIII	ACRYGT	1 cut(s)	1947
AhdI	GACNNNNNGTC	1 cut(s)	2597
AjiI	CACGTC	1 cut(s)	1948
AjnI	CCWGG	5 cut(s)	36, 312, 714, 2261, 2338
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
Alw21I	GWGCWC	2 cut(s)	1056, 1801
Alw26I	GTCTC	4 cut(s)	830, 2045, 2261, 2691
Alw44I	GTGCAC	1 cut(s)	1797
AlwI	GGATC	7 cut(s)	20, 656, 1850, 2144, 2157, 2442, 2455
AoxI	GGCC	6 cut(s)	175, 310, 1037, 1593, 2035, 2311
ApaLI	GTGCAC	1 cut(s)	1797
ApeKI	GCWGC	3 cut(s)	41, 269, 1088
ApoI	RAATTY	7 cut(s)	66, 303, 525, 677, 873, 2042, 2678
ArsI	GACNNNNNNTTYG	2 cut(s)	1994, 2026
AseI	ATTAAT	1 cut(s)	1460
Asp700I	GAANNNNTTC	1 cut(s)	2326
AspLEI	GCGC	2 cut(s)	287, 2746
AspS9I	GGNCC	3 cut(s)	279, 439, 797
AsuC2I	CCSGG	2 cut(s)	2276, 2615
AsuHPI	GGTGA	6 cut(s)	409, 686, 714, 1208, 1817, 1901
AvaII	GGWCC	3 cut(s)	279, 439, 797
BaeGI	GKGCMC	1 cut(s)	1801
BaeI	ACNNNNGTAYC	4 cut(s)	963, 996, 1650, 1683
BamHI	GGATCC	2 cut(s)	2149, 2447
BanII	GRGCYC	2 cut(s)	1056, 1622
BbsI	GAAGAC	1 cut(s)	1950
Bbv12I	GWGCWC	2 cut(s)	1056, 1801
BbvCI	CCTCAGC	1 cut(s)	183
BbvI	GCAGC	3 cut(s)	28, 281, 1100
BccI	CCATC	8 cut(s)	638, 880, 1187, 1438, 1604, 2465, 2540, 2734
BciT130I	CCWGG	5 cut(s)	38, 314, 716, 2263, 2340
BciVI	GTATCC	1 cut(s)	1838
BcnI	CCSGG	2 cut(s)	2276, 2615
BcoDI	GTCTC	4 cut(s)	830, 2045, 2261, 2691
BfaI	CTAG	3 cut(s)	146, 263, 552
BfmI	CTRYAG	4 cut(s)	42, 636, 933, 2487
BfoI	RGCGCY	1 cut(s)	2747
BfuAI	ACCTGC	2 cut(s)	951, 2480
BfuI	GTATCC	1 cut(s)	1838
BisI	GCNGC	3 cut(s)	42, 270, 1089
BlsI	GCNGC	3 cut(s)	43, 271, 1090
Bme1390I	CCNGG	7 cut(s)	38, 314, 716, 2263, 2276, 2340, 2615
Bme18I	GGWCC	3 cut(s)	279, 439, 797
BmeRI	GACNNNNNGTC	1 cut(s)	2597
BmgBI	CACGTC	1 cut(s)	1948
BmgT120I	GGNCC	3 cut(s)	279, 439, 797
BmiI	GGNNCC	6 cut(s)	280, 440, 1428, 2151, 2449, 2494
BmrFI	CCNGG	7 cut(s)	38, 314, 716, 2263, 2276, 2340, 2615
BmsI	GCATC	3 cut(s)	251, 256, 386
BpiI	GAAGAC	1 cut(s)	1950
BpmI	CTGGAG	3 cut(s)	703, 1748, 1813
Bpu10I	CCTNAGC	1 cut(s)	183
BpuEI	CTTGAG	3 cut(s)	854, 1040, 2069
BpuMI	CCSGG	2 cut(s)	2276, 2615
BsaBI	GATNNNNATC	3 cut(s)	24, 1296, 1707
BsaI	GGTCTC	1 cut(s)	2045
BsaJI	CCNNGG	6 cut(s)	274, 714, 955, 1105, 2262, 2274
BsaXI	ACNNNNNCTCC	4 cut(s)	2308, 2338, 2498, 2528
Bse1I	ACTGG	3 cut(s)	211, 589, 1660
Bse3DI	GCAATG	1 cut(s)	1098
Bse8I	GATNNNNATC	3 cut(s)	24, 1296, 1707
BseBI	CCWGG	5 cut(s)	38, 314, 716, 2263, 2340
BseDI	CCNNGG	6 cut(s)	274, 714, 955, 1105, 2262, 2274
BseGI	GGATG	7 cut(s)	649, 891, 1297, 1596, 1644, 1933, 2563
BseJI	GATNNNNATC	3 cut(s)	24, 1296, 1707
BseMI	GCAATG	1 cut(s)	1098
BseNI	ACTGG	3 cut(s)	211, 589, 1660
BseSI	GKGCMC	1 cut(s)	1801
BseXI	GCAGC	3 cut(s)	28, 281, 1100
BsgI	GTGCAG	2 cut(s)	311, 2319
BshFI	GGCC	6 cut(s)	177, 312, 1039, 1595, 2037, 2313
BsiHKAI	GWGCWC	2 cut(s)	1056, 1801
BsiSI	CCGG	4 cut(s)	2276, 2314, 2367, 2615
BslFI	GGGAC	4 cut(s)	86, 452, 1192, 1585
BsmAI	GTCTC	4 cut(s)	830, 2045, 2261, 2691
BsmBI	CGTCTC	2 cut(s)	830, 2261
BsmFI	GGGAC	4 cut(s)	86, 452, 1192, 1585
BsmI	GAATGC	4 cut(s)	32, 220, 1372, 1728
BsnI	GGCC	6 cut(s)	177, 312, 1039, 1595, 2037, 2313
Bso31I	GGTCTC	1 cut(s)	2045
Bsp1286I	GDGCHC	3 cut(s)	1056, 1622, 1801
Bsp143I	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
BspACI	CCGC	2 cut(s)	1878, 2528
BspANI	GGCC	6 cut(s)	177, 312, 1039, 1595, 2037, 2313
BspHI	TCATGA	1 cut(s)	1705
BspLI	GGNNCC	6 cut(s)	280, 440, 1428, 2151, 2449, 2494
BspMAI	CTGCAG	2 cut(s)	46, 2491
BspMI	ACCTGC	2 cut(s)	951, 2480
BspPI	GGATC	7 cut(s)	20, 656, 1850, 2144, 2157, 2442, 2455
BspTNI	GGTCTC	1 cut(s)	2045
BsrBI	CCGCTC	1 cut(s)	1878
BsrDI	GCAATG	1 cut(s)	1098
BsrI	ACTGG	3 cut(s)	211, 589, 1660
BssECI	CCNNGG	6 cut(s)	274, 714, 955, 1105, 2262, 2274
BssMI	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
BssT1I	CCWWGG	3 cut(s)	274, 955, 1105
Bst2UI	CCWGG	5 cut(s)	38, 314, 716, 2263, 2340
Bst4CI	ACNGT	8 cut(s)	623, 637, 863, 1048, 1206, 1612, 2223, 2599
Bst6I	CTCTTC	2 cut(s)	1636, 2658
BstC8I	GCNNGC	3 cut(s)	430, 1593, 1752
BstF5I	GGATG	7 cut(s)	649, 891, 1297, 1596, 1644, 1933, 2563
BstH2I	RGCGCY	1 cut(s)	2747
BstHHI	GCGC	2 cut(s)	287, 2746
BstKTI	GATC	7 cut(s)	28, 664, 1705, 1711, 1858, 2152, 2450
BstMAI	GTCTC	4 cut(s)	830, 2045, 2261, 2691
BstMBI	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
BstMWI	GCNNNNNNNGC	3 cut(s)	38, 47, 552
BstNI	CCWGG	5 cut(s)	38, 314, 716, 2263, 2340
BstNSI	RCATGY	1 cut(s)	1591
BstSCI	CCNGG	7 cut(s)	36, 312, 714, 2261, 2274, 2338, 2613
BstSFI	CTRYAG	4 cut(s)	42, 636, 933, 2487
BstSLI	GKGCMC	1 cut(s)	1801
BstV1I	GCAGC	3 cut(s)	28, 281, 1100
BstV2I	GAAGAC	1 cut(s)	1950
BstX2I	RGATCY	3 cut(s)	25, 2149, 2447
BstYI	RGATCY	3 cut(s)	25, 2149, 2447
BsuI	GTATCC	1 cut(s)	1838
BsuRI	GGCC	6 cut(s)	177, 312, 1039, 1595, 2037, 2313
BtrI	CACGTC	1 cut(s)	1948
BtsCI	GGATG	7 cut(s)	649, 891, 1297, 1596, 1644, 1933, 2563
BtsIMutI	CAGTG	2 cut(s)	1053, 1249
BveI	ACCTGC	2 cut(s)	951, 2480
Cac8I	GCNNGC	3 cut(s)	430, 1593, 1752
CciI	TCATGA	1 cut(s)	1705
CfoI	GCGC	2 cut(s)	287, 2746
Cfr13I	GGNCC	3 cut(s)	279, 439, 797
CsiI	ACCWGGT	1 cut(s)	2338
Csp6I	GTAC	5 cut(s)	156, 592, 972, 1659, 2060
CspCI	CAANNNNNGTGG	2 cut(s)	207, 242
CviQI	GTAC	5 cut(s)	156, 592, 972, 1659, 2060
DpnI	GATC	7 cut(s)	27, 663, 1704, 1710, 1857, 2151, 2449
DpnII	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
DraI	TTTAAA	1 cut(s)	1935
DraIII	CACNNNGTG	2 cut(s)	1805, 2342
DrdI	GACNNNNNNGTC	1 cut(s)	1952
DriI	GACNNNNNGTC	1 cut(s)	2597
DseDI	GACNNNNNNGTC	1 cut(s)	1952
EaeI	YGGCCR	1 cut(s)	2311
Eam1104I	CTCTTC	2 cut(s)	1636, 2658
Eam1105I	GACNNNNNGTC	1 cut(s)	2597
EarI	CTCTTC	2 cut(s)	1636, 2658
Ecl136II	GAGCTC	1 cut(s)	1054
Eco130I	CCWWGG	3 cut(s)	274, 955, 1105
Eco24I	GRGCYC	2 cut(s)	1056, 1622
Eco31I	GGTCTC	1 cut(s)	2045
Eco32I	GATATC	1 cut(s)	1144
Eco47I	GGWCC	3 cut(s)	279, 439, 797
Eco53kI	GAGCTC	1 cut(s)	1054
Eco57I	CTGAAG	4 cut(s)	768, 1014, 1962, 2679
EcoICRI	GAGCTC	1 cut(s)	1054
EcoO109I	RGGNCCY	1 cut(s)	279
EcoRI	GAATTC	1 cut(s)	677
EcoRII	CCWGG	5 cut(s)	36, 312, 714, 2261, 2338
EcoRV	GATATC	1 cut(s)	1144
EcoT14I	CCWWGG	3 cut(s)	274, 955, 1105
EcoT22I	ATGCAT	3 cut(s)	379, 1312, 2172
EcoT38I	GRGCYC	2 cut(s)	1056, 1622
ErhI	CCWWGG	3 cut(s)	274, 955, 1105
Esp3I	CGTCTC	2 cut(s)	830, 2261
FalI	AAGNNNNNCTT	4 cut(s)	44, 76, 816, 848
FaqI	GGGAC	4 cut(s)	86, 452, 1192, 1585
FauI	CCCGC	1 cut(s)	2521
Fnu4HI	GCNGC	3 cut(s)	42, 270, 1089
FokI	GGATG	7 cut(s)	656, 898, 1304, 1583, 1631, 1940, 2570
FriOI	GRGCYC	2 cut(s)	1056, 1622
Fsp4HI	GCNGC	3 cut(s)	42, 270, 1089
FspBI	CTAG	3 cut(s)	146, 263, 552
GlaI	GCGC	2 cut(s)	286, 2745
GluI	GCNGC	3 cut(s)	42, 270, 1089
GsuI	CTGGAG	3 cut(s)	703, 1748, 1813
HaeII	RGCGCY	1 cut(s)	2747
HaeIII	GGCC	6 cut(s)	177, 312, 1039, 1595, 2037, 2313
HapII	CCGG	4 cut(s)	2276, 2314, 2367, 2615
HhaI	GCGC	2 cut(s)	287, 2746
Hin6I	GCGC	2 cut(s)	285, 2744
HinP1I	GCGC	2 cut(s)	285, 2744
HincII	GTYRAC	1 cut(s)	1487
HindII	GTYRAC	1 cut(s)	1487
HindIII	AAGCTT	5 cut(s)	53, 573, 1235, 2253, 2708
HpaII	CCGG	4 cut(s)	2276, 2314, 2367, 2615
HphI	GGTGA	6 cut(s)	409, 686, 714, 1208, 1817, 1901
Hpy166II	GTNNAC	3 cut(s)	229, 1487, 1799
Hpy8I	GTNNAC	3 cut(s)	229, 1487, 1799
Hpy99I	CGWCG	1 cut(s)	1696
HpyCH4III	ACNGT	8 cut(s)	623, 637, 863, 1048, 1206, 1612, 2223, 2599
HpyCH4IV	ACGT	1 cut(s)	1947
HpyF10VI	GCNNNNNNNGC	3 cut(s)	38, 47, 552
HpySE526I	ACGT	1 cut(s)	1947
HspAI	GCGC	2 cut(s)	285, 2744
Kzo9I	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
LmnI	GCTCC	5 cut(s)	47, 684, 709, 1051, 1729
Lsp1109I	GCAGC	3 cut(s)	28, 281, 1100
LweI	GCATC	3 cut(s)	251, 256, 386
MabI	ACCWGGT	1 cut(s)	2338
MaeI	CTAG	3 cut(s)	146, 263, 552
MaeII	ACGT	1 cut(s)	1947
MaeIII	GTNAC	6 cut(s)	415, 904, 979, 1640, 1669, 2531
MalI	GATC	7 cut(s)	27, 663, 1704, 1710, 1857, 2151, 2449
MbiI	CCGCTC	1 cut(s)	1878
MboI	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
MfeI	CAATTG	2 cut(s)	2379, 2424
MflI	RGATCY	3 cut(s)	25, 2149, 2447
MhlI	GDGCHC	3 cut(s)	1056, 1622, 1801
MlyI	GAGTC	4 cut(s)	224, 775, 1388, 1492
MmeI	TCCRAC	2 cut(s)	1766, 2436
Mph1103I	ATGCAT	3 cut(s)	379, 1312, 2172
MroXI	GAANNNNTTC	1 cut(s)	2326
MseI	TTAA	7 cut(s)	456, 818, 1413, 1460, 1470, 1934, 2007
MslI	CAYNNNNRTG	1 cut(s)	495
MspA1I	CMGCKG	1 cut(s)	968
MspI	CCGG	4 cut(s)	2276, 2314, 2367, 2615
MspR9I	CCNGG	7 cut(s)	38, 314, 716, 2263, 2276, 2340, 2615
MunI	CAATTG	2 cut(s)	2379, 2424
Mva1269I	GAATGC	4 cut(s)	32, 220, 1372, 1728
MvaI	CCWGG	5 cut(s)	38, 314, 716, 2263, 2340
MwoI	GCNNNNNNNGC	3 cut(s)	38, 47, 552
NciI	CCSGG	2 cut(s)	2276, 2615
NdeII	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
NlaIV	GGNNCC	6 cut(s)	280, 440, 1428, 2151, 2449, 2494
NmuCI	GTSAC	3 cut(s)	415, 979, 1669
NsiI	ATGCAT	3 cut(s)	379, 1312, 2172
NspI	RCATGY	1 cut(s)	1591
PagI	TCATGA	1 cut(s)	1705
PctI	GAATGC	4 cut(s)	32, 220, 1372, 1728
PdmI	GAANNNNTTC	1 cut(s)	2326
PflMI	CCANNNNNTGG	3 cut(s)	91, 173, 2384
PkrI	GCNGC	3 cut(s)	43, 271, 1090
PleI	GAGTC	4 cut(s)	224, 775, 1387, 1491
PpsI	GAGTC	4 cut(s)	224, 775, 1387, 1491
PpuMI	RGGWCCY	1 cut(s)	279
PshBI	ATTAAT	1 cut(s)	1460
Psp124BI	GAGCTC	1 cut(s)	1056
Psp5II	RGGWCCY	1 cut(s)	279
Psp6I	CCWGG	5 cut(s)	36, 312, 714, 2261, 2338
PspGI	CCWGG	5 cut(s)	36, 312, 714, 2261, 2338
PspN4I	GGNNCC	6 cut(s)	280, 440, 1428, 2151, 2449, 2494
PspPI	GGNCC	3 cut(s)	279, 439, 797
PspPPI	RGGWCCY	1 cut(s)	279
PstI	CTGCAG	2 cut(s)	46, 2491
PsuI	RGATCY	3 cut(s)	25, 2149, 2447
PvuII	CAGCTG	1 cut(s)	968
RsaI	GTAC	5 cut(s)	157, 593, 973, 1660, 2061
RsaNI	GTAC	5 cut(s)	156, 592, 972, 1659, 2060
RseI	CAYNNNNRTG	1 cut(s)	495
SacI	GAGCTC	1 cut(s)	1056
SaqAI	TTAA	7 cut(s)	456, 818, 1413, 1460, 1470, 1934, 2007
SatI	GCNGC	3 cut(s)	42, 270, 1089
Sau3AI	GATC	7 cut(s)	25, 661, 1702, 1708, 1855, 2149, 2447
Sau96I	GGNCC	3 cut(s)	279, 439, 797
SchI	GAGTC	4 cut(s)	224, 775, 1388, 1492
ScrFI	CCNGG	7 cut(s)	38, 314, 716, 2263, 2276, 2340, 2615
SduI	GDGCHC	3 cut(s)	1056, 1622, 1801
SexAI	ACCWGGT	1 cut(s)	2338
SfaNI	GCATC	3 cut(s)	251, 256, 386
SfcI	CTRYAG	4 cut(s)	42, 636, 933, 2487
SinI	GGWCC	3 cut(s)	279, 439, 797
SmiI	ATTTAAAT	1 cut(s)	1935
SmiMI	CAYNNNNRTG	1 cut(s)	495
SmlI	CTYRAG	3 cut(s)	833, 1055, 2048
SmoI	CTYRAG	3 cut(s)	833, 1055, 2048
SsiI	CCGC	2 cut(s)	1878, 2528
SspI	AATATT	1 cut(s)	2005
SspMI	CTAG	3 cut(s)	146, 263, 552
SstI	GAGCTC	1 cut(s)	1056
StyD4I	CCNGG	7 cut(s)	36, 312, 714, 2261, 2274, 2338, 2613
StyI	CCWWGG	3 cut(s)	274, 955, 1105
SwaI	ATTTAAAT	1 cut(s)	1935
TaaI	ACNGT	8 cut(s)	623, 637, 863, 1048, 1206, 1612, 2223, 2599
TaiI	ACGT	1 cut(s)	1950
TaqI	TCGA	3 cut(s)	322, 1075, 1694
TaqII	GACCGA	1 cut(s)	2069
TatI	WGTACW	3 cut(s)	155, 591, 2059
Tru1I	TTAA	7 cut(s)	456, 818, 1413, 1460, 1470, 1934, 2007
Tru9I	TTAA	7 cut(s)	456, 818, 1413, 1460, 1470, 1934, 2007
TscAI	CASTG	2 cut(s)	1053, 1249
TseFI	GTSAC	3 cut(s)	415, 979, 1669
TseI	GCWGC	3 cut(s)	41, 269, 1088
Tsp45I	GTSAC	3 cut(s)	415, 979, 1669
TspGWI	ACGGA	1 cut(s)	854
TspRI	CASTG	2 cut(s)	1053, 1249
Van91I	CCANNNNNTGG	3 cut(s)	91, 173, 2384
VneI	GTGCAC	1 cut(s)	1797
VpaK11BI	GGWCC	3 cut(s)	279, 439, 797
VspI	ATTAAT	1 cut(s)	1460
XapI	RAATTY	7 cut(s)	66, 303, 525, 677, 873, 2042, 2678
XceI	RCATGY	1 cut(s)	1591
XmnI	GAANNNNTTC	1 cut(s)	2326
XspI	CTAG	3 cut(s)	146, 263, 552
Zsp2I	ATGCAT	3 cut(s)	379, 1312, 2172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.