No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom02g03120 pycom03g19470 pycom13g18620 pycom15g16010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 102 |
| Acc65I | GGTACC | 1 cut(s) | 187 |
| AccB1I | GGYRCC | 1 cut(s) | 187 |
| AciI | CCGC | 2 cut(s) | 234, 355 |
| AclWI | GGATC | 1 cut(s) | 128 |
| AcsI | RAATTY | 2 cut(s) | 247, 390 |
| AfaI | GTAC | 1 cut(s) | 189 |
| AgsI | TTSAA | 1 cut(s) | 305 |
| Alw26I | GTCTC | 1 cut(s) | 278 |
| AlwI | GGATC | 1 cut(s) | 128 |
| ApeKI | GCWGC | 2 cut(s) | 146, 272 |
| ApoI | RAATTY | 2 cut(s) | 247, 390 |
| Asp718I | GGTACC | 1 cut(s) | 187 |
| AspLEI | GCGC | 1 cut(s) | 103 |
| AsuC2I | CCSGG | 1 cut(s) | 294 |
| AsuHPI | GGTGA | 2 cut(s) | 19, 356 |
| BanI | GGYRCC | 1 cut(s) | 187 |
| BbvI | GCAGC | 2 cut(s) | 158, 284 |
| BcnI | CCSGG | 1 cut(s) | 294 |
| BcoDI | GTCTC | 1 cut(s) | 278 |
| BisI | GCNGC | 2 cut(s) | 147, 273 |
| BlsI | GCNGC | 2 cut(s) | 148, 274 |
| Bme1390I | CCNGG | 1 cut(s) | 294 |
| BmiI | GGNNCC | 1 cut(s) | 189 |
| BmrFI | CCNGG | 1 cut(s) | 294 |
| BpuMI | CCSGG | 1 cut(s) | 294 |
| Bsa29I | ATCGAT | 1 cut(s) | 132 |
| BsaBI | GATNNNNATC | 1 cut(s) | 337 |
| Bse118I | RCCGGY | 2 cut(s) | 184, 211 |
| Bse1I | ACTGG | 2 cut(s) | 33, 117 |
| Bse8I | GATNNNNATC | 1 cut(s) | 337 |
| BseCI | ATCGAT | 1 cut(s) | 132 |
| BseGI | GGATG | 1 cut(s) | 268 |
| BseJI | GATNNNNATC | 1 cut(s) | 337 |
| BseMII | CTCAG | 2 cut(s) | 150, 273 |
| BseNI | ACTGG | 2 cut(s) | 33, 117 |
| BseXI | GCAGC | 2 cut(s) | 158, 284 |
| BseYI | CCCAGC | 1 cut(s) | 137 |
| BshNI | GGYRCC | 1 cut(s) | 187 |
| BshVI | ATCGAT | 1 cut(s) | 132 |
| BsiSI | CCGG | 3 cut(s) | 185, 212, 293 |
| BsmAI | GTCTC | 1 cut(s) | 278 |
| Bsp143I | GATC | 1 cut(s) | 133 |
| BspACI | CCGC | 2 cut(s) | 234, 355 |
| BspCNI | CTCAG | 2 cut(s) | 151, 274 |
| BspDI | ATCGAT | 1 cut(s) | 132 |
| BspLI | GGNNCC | 1 cut(s) | 189 |
| BspPI | GGATC | 1 cut(s) | 128 |
| BspT107I | GGYRCC | 1 cut(s) | 187 |
| BsrFI | RCCGGY | 2 cut(s) | 184, 211 |
| BsrI | ACTGG | 2 cut(s) | 33, 117 |
| BssAI | RCCGGY | 2 cut(s) | 184, 211 |
| BssMI | GATC | 1 cut(s) | 133 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 278 |
| BstC8I | GCNNGC | 1 cut(s) | 182 |
| BstDEI | CTNAG | 3 cut(s) | 159, 282, 386 |
| BstF5I | GGATG | 1 cut(s) | 268 |
| BstHHI | GCGC | 1 cut(s) | 103 |
| BstKTI | GATC | 1 cut(s) | 136 |
| BstMAI | GTCTC | 1 cut(s) | 278 |
| BstMBI | GATC | 1 cut(s) | 133 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 278 |
| BstSCI | CCNGG | 1 cut(s) | 292 |
| BstV1I | GCAGC | 2 cut(s) | 158, 284 |
| Bsu15I | ATCGAT | 1 cut(s) | 132 |
| BsuTUI | ATCGAT | 1 cut(s) | 132 |
| BtsCI | GGATG | 1 cut(s) | 268 |
| BtsIMutI | CAGTG | 3 cut(s) | 40, 124, 226 |
| Cac8I | GCNNGC | 1 cut(s) | 182 |
| CfoI | GCGC | 1 cut(s) | 103 |
| Cfr10I | RCCGGY | 2 cut(s) | 184, 211 |
| ClaI | ATCGAT | 1 cut(s) | 132 |
| Csp6I | GTAC | 1 cut(s) | 188 |
| CviJI | RGCY | 2 cut(s) | 184, 215 |
| CviKI_1 | RGCY | 2 cut(s) | 184, 215 |
| CviQI | GTAC | 1 cut(s) | 188 |
| DdeI | CTNAG | 3 cut(s) | 159, 282, 386 |
| DpnI | GATC | 1 cut(s) | 135 |
| DpnII | GATC | 1 cut(s) | 133 |
| Fnu4HI | GCNGC | 2 cut(s) | 147, 273 |
| FokI | GGATG | 1 cut(s) | 275 |
| Fsp4HI | GCNGC | 2 cut(s) | 147, 273 |
| FspI | TGCGCA | 1 cut(s) | 102 |
| GlaI | GCGC | 1 cut(s) | 102 |
| GluI | GCNGC | 2 cut(s) | 147, 273 |
| GsaI | CCCAGC | 1 cut(s) | 141 |
| HapII | CCGG | 3 cut(s) | 185, 212, 293 |
| HhaI | GCGC | 1 cut(s) | 103 |
| Hin6I | GCGC | 1 cut(s) | 101 |
| HinP1I | GCGC | 1 cut(s) | 101 |
| HinfI | GANTC | 6 cut(s) | 29, 71, 113, 155, 173, 323 |
| HpaII | CCGG | 3 cut(s) | 185, 212, 293 |
| HphI | GGTGA | 2 cut(s) | 19, 356 |
| Hpy166II | GTNNAC | 1 cut(s) | 38 |
| Hpy188I | TCNGA | 7 cut(s) | 28, 70, 76, 160, 332, 364, 389 |
| Hpy8I | GTNNAC | 1 cut(s) | 38 |
| HpyCH4V | TGCA | 1 cut(s) | 203 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 278 |
| HpyF3I | CTNAG | 3 cut(s) | 159, 282, 386 |
| HspAI | GCGC | 1 cut(s) | 101 |
| KpnI | GGTACC | 1 cut(s) | 191 |
| Kzo9I | GATC | 1 cut(s) | 133 |
| Lsp1109I | GCAGC | 2 cut(s) | 158, 284 |
| MaeIII | GTNAC | 1 cut(s) | 344 |
| MalI | GATC | 1 cut(s) | 135 |
| MboI | GATC | 1 cut(s) | 133 |
| MboII | GAAGA | 2 cut(s) | 137, 164 |
| MfeI | CAATTG | 1 cut(s) | 104 |
| MluCI | AATT | 4 cut(s) | 104, 247, 350, 390 |
| MlyI | GAGTC | 1 cut(s) | 317 |
| MnlI | CCTC | 4 cut(s) | 37, 154, 253, 381 |
| MspI | CCGG | 3 cut(s) | 185, 212, 293 |
| MspR9I | CCNGG | 1 cut(s) | 294 |
| MunI | CAATTG | 1 cut(s) | 104 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 278 |
| NciI | CCSGG | 1 cut(s) | 294 |
| NdeII | GATC | 1 cut(s) | 133 |
| NlaIV | GGNNCC | 1 cut(s) | 189 |
| NmuCI | GTSAC | 1 cut(s) | 344 |
| NsbI | TGCGCA | 1 cut(s) | 102 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 138 |
| PfeI | GAWTC | 5 cut(s) | 29, 71, 113, 155, 173 |
| PflFI | GACNNNGTC | 1 cut(s) | 326 |
| PkrI | GCNGC | 2 cut(s) | 148, 274 |
| PleI | GAGTC | 1 cut(s) | 317 |
| PpsI | GAGTC | 1 cut(s) | 317 |
| PspFI | CCCAGC | 1 cut(s) | 137 |
| PspN4I | GGNNCC | 1 cut(s) | 189 |
| PsyI | GACNNNGTC | 1 cut(s) | 326 |
| RsaI | GTAC | 1 cut(s) | 189 |
| RsaNI | GTAC | 1 cut(s) | 188 |
| SatI | GCNGC | 2 cut(s) | 147, 273 |
| Sau3AI | GATC | 1 cut(s) | 133 |
| SchI | GAGTC | 1 cut(s) | 317 |
| ScrFI | CCNGG | 1 cut(s) | 294 |
| Sse9I | AATT | 4 cut(s) | 104, 247, 350, 390 |
| SsiI | CCGC | 2 cut(s) | 234, 355 |
| StyD4I | CCNGG | 1 cut(s) | 292 |
| TaqI | TCGA | 2 cut(s) | 132, 258 |
| TasI | AATT | 4 cut(s) | 104, 247, 350, 390 |
| TfiI | GAWTC | 5 cut(s) | 29, 71, 113, 155, 173 |
| TscAI | CASTG | 3 cut(s) | 40, 124, 226 |
| TseFI | GTSAC | 1 cut(s) | 344 |
| TseI | GCWGC | 2 cut(s) | 146, 272 |
| Tsp45I | GTSAC | 1 cut(s) | 344 |
| TspDTI | ATGAA | 1 cut(s) | 93 |
| TspGWI | ACGGA | 1 cut(s) | 30 |
| TspRI | CASTG | 3 cut(s) | 40, 124, 226 |
| Tth111I | GACNNNGTC | 1 cut(s) | 326 |
| XapI | RAATTY | 2 cut(s) | 247, 390 |