pycom04g02700

Galactolipase DONGLE

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
2431390 .. 2432802
1413 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g02700.1

Sequence Viewer

Length: 1413 bp
ATGGCTTCCATGATTCAAATGCCTACCACAAACATGAACCAACATGTGACGTTTCCCAAAAACATTGGGATACGCTCGGTTACTTTTGGGCAAATTTGTCTGGCAAAAAAAACTGAAGTGGCAGCTGCCACGAGACACGCAGTTGCTATGTCCGCAGCAGCAGTCGCTGAAGTGGTAACAAGAAATACTACTGGAGCCAATATTAACAATCCCAGCTCTAGCACTAGTTTGGCTGATCAATGGAGAGAAATACAAGGATCAAACAACTGGGAAAACCTGGTGGAACCATTGCACCCACTTCTCCGGCAAGAGATCATTAGATACGGAGACTTTGTCACCGCCTGTTACAAGGGCTTTGATCTCGACCCCAACTCCAAACGCTACCTCAATTGCAAATACGGAAAGAAAAACATGTTCAGAGAGGTTGGAATGGAGAATTGCGGTTATGAAGTCACCAAGTACATCTACGCCACTCCAGACATCAACATCCCAATCCAAAATGGAGAGTCGTGCGGCCGTTGGATTGGATATGTCGCCGTCTCGTCAGATGATGCGGTTAAGAGGCTTGGAAGAAGAGATATTATTGTTACCTTCAGAGGCACTGTTACAAACCCTGAGTGGGTTGCAAACCTAATGAGCTCACTCACTCCCGCAAGGCTCGATCCTCATAATCCAAGAAATGATGTAAAAGTGGAATCTGGATTTTTGAGCTTGTACACGTCAGATGAAAGCCAAAGCAAGTTTGGACTAGGAAGTTGCCGGGAACAGCTTCTTTCGGAGGTGTCGAGGTTGCTAAACAAGTACAAAGGTGAGAAGTTAAGCATAACTATGGCAGGACATAGTATGGGGAGTTCATTGGCTCTTCTTCTTGGTTATGACATCGCAGAGCTCGGGTTAAACCGAGATAATTCTGGAACGAAAACACCGATTACAGTGTTCTCGTTCGGAGGCCCAAGGGTTGGAAACTCGGGGTTCAAGCAAAGGTGTGAGGAATTGGGTGTGAAGGTGTTGAGAATAGTTAATGTGAATGACCCCATTACCAAGATGCCTGGGGTTGTTTTCAATCATGAAAATTTTAGGGTTTTGGCAGGTGAGGGGTCATTTGAGTTCCCATGGAGTTGCTCGTGTTATGCACATGTGGGAGTTGAACTAGTACTTGATTTCTTCAACATGCAGAACCCTTCATGTGTTCATGACTTGGGGACTTATATTAGCTTGCTCAAATGCCCAAAGAGAGTCCAGATTCAAAAGGAGGGAGCGGATTTGATGAACAGAGCTAGAGAACTGCTCTTGAAAATGAATATGAGTGCTCGAAATCTCAACATGCAGCTGCCGATCCCATGGAGAAGTGCTTCTGCTAGCAGTCCCACCAGCAATATGGTGAACCTTCAGATTCAATCGCAAAGAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

471

Amino Acids

52.17

Weight (kDa)

8.94

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 195 - 352 2.8e-36 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0016585)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05800
fragaria_vesca FvH4_4g11680
malus_domestica MD04G1032700.v1.1
prunus_persica Prupe.1G181800_v2.0.a1
pyrus_communis pycom04g02700
rosa_chinensis RchiOBHm_Chr4g0408991
rosa_laevigata RLG00000008599
rosa_multiflora Rmu_sc0003685.1_g000001
rosa_roxburghii Rroxscaffold_5G00353440
rosa_rugosa Rorug04G0089000
rosa_samantha Rh4AG153200 Rh4BG151000 Rh4CG161600 Rh4DG146500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1079
Acc36I ACCTGC 1 cut(s) 1079
AccB7I CCANNNNNTGG 1 cut(s) 959
AccBSI CCGCTC 1 cut(s) 1259
AciI CCGC 7 cut(s) 153, 339, 441, 513, 554, 651, 1259
AclWI GGATC 3 cut(s) 265, 656, 1330
AcoI YGGCCR 1 cut(s) 514
AcsI RAATTY 2 cut(s) 93, 1072
AcuI CTGAAG 4 cut(s) 135, 189, 577, 1373
AfaI GTAC 4 cut(s) 461, 716, 803, 1155
AfiI CCNNNNNNNGG 2 cut(s) 619, 959
AflIII ACRYGT 4 cut(s) 43, 411, 717, 1135
AgsI TTSAA 8 cut(s) 17, 976, 1063, 1148, 1168, 1247, 1294, 1397
AhlI ACTAGT 2 cut(s) 224, 1150
AjiI CACGTC 1 cut(s) 720
AjnI CCWGG 2 cut(s) 276, 1048
AluBI AGCT 9 cut(s) 125, 216, 639, 711, 769, 889, 1215, 1277, 1330
AluI AGCT 9 cut(s) 125, 216, 639, 711, 769, 889, 1215, 1277, 1330
Alw21I GWGCWC 3 cut(s) 641, 891, 1312
Alw26I GTCTC 3 cut(s) 127, 321, 544
AlwI GGATC 3 cut(s) 265, 656, 1330
AlwNI CAGNNNCTG 1 cut(s) 167
Ama87I CYCGRG 2 cut(s) 890, 967
AoxI GGCC 2 cut(s) 514, 949
ApeKI GCWGC 6 cut(s) 122, 125, 155, 158, 1327, 1330
ApoI RAATTY 2 cut(s) 93, 1072
Asp700I GAANNNNTTC 2 cut(s) 768, 1351
AspS9I GGNCC 1 cut(s) 950
AsuC2I CCSGG 1 cut(s) 761
AsuHPI GGTGA 5 cut(s) 328, 445, 821, 1103, 1393
AsuNHI GCTAGC 1 cut(s) 1358
AvaI CYCGRG 2 cut(s) 890, 967
BanII GRGCYC 2 cut(s) 641, 891
BauI CACGAG 2 cut(s) 130, 1123
Bbv12I GWGCWC 3 cut(s) 641, 891, 1312
BbvI GCAGC 6 cut(s) 112, 134, 167, 170, 1317, 1339
BceAI ACGGC 2 cut(s) 501, 521
BciT130I CCWGG 2 cut(s) 278, 1050
BciVI GTATCC 1 cut(s) 63
BclI TGATCA 1 cut(s) 235
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 3 cut(s) 127, 321, 544
BcuI ACTAGT 2 cut(s) 224, 1150
BfaI CTAG 6 cut(s) 219, 225, 749, 1151, 1278, 1359
BfuAI ACCTGC 1 cut(s) 1079
BfuI GTATCC 1 cut(s) 63
BisI GCNGC 7 cut(s) 123, 126, 156, 159, 514, 1328, 1331
BlsI GCNGC 7 cut(s) 124, 127, 157, 160, 515, 1329, 1332
BmcAI AGTACT 1 cut(s) 1155
Bme1390I CCNGG 3 cut(s) 278, 761, 1050
BmeT110I CYCGRG 2 cut(s) 890, 967
BmgBI CACGTC 1 cut(s) 720
BmgT120I GGNCC 1 cut(s) 950
BmiI GGNNCC 2 cut(s) 196, 285
BmrFI CCNGG 3 cut(s) 278, 761, 1050
BmrI ACTGGG 1 cut(s) 277
BmsI GCATC 2 cut(s) 541, 1035
BmtI GCTAGC 1 cut(s) 1362
BmuI ACTGGG 1 cut(s) 277
BplI GAGNNNNNCTC 2 cut(s) 1272, 1304
BpmI CTGGAG 2 cut(s) 213, 459
BpuMI CCSGG 1 cut(s) 761
BsaJI CCNNGG 4 cut(s) 953, 1049, 1112, 1340
BsaXI ACNNNNNCTCC 4 cut(s) 318, 348, 356, 386
Bsc4I CCNNNNNNNGG 2 cut(s) 619, 959
Bse1I ACTGG 2 cut(s) 196, 272
Bse3DI GCAATG 1 cut(s) 287
BseBI CCWGG 2 cut(s) 278, 1050
BseDI CCNNGG 4 cut(s) 953, 1049, 1112, 1340
BseGI GGATG 1 cut(s) 486
BseLI CCNNNNNNNGG 2 cut(s) 619, 959
BseMI GCAATG 1 cut(s) 287
BseMII CTCAG 1 cut(s) 606
BseNI ACTGG 2 cut(s) 196, 272
BseX3I CGGCCG 1 cut(s) 514
BseXI GCAGC 6 cut(s) 112, 134, 167, 170, 1317, 1339
BseYI CCCAGC 1 cut(s) 212
Bsh1285I CGRYCG 1 cut(s) 517
BshFI GGCC 2 cut(s) 516, 951
BsiEI CGRYCG 1 cut(s) 517
BsiHKAI GWGCWC 3 cut(s) 641, 891, 1312
BsiHKCI CYCGRG 2 cut(s) 890, 967
BsiSI CCGG 2 cut(s) 304, 760
BslFI GGGAC 2 cut(s) 1216, 1350
BslI CCNNNNNNNGG 2 cut(s) 619, 959
BsmAI GTCTC 3 cut(s) 127, 321, 544
BsmBI CGTCTC 1 cut(s) 544
BsmFI GGGAC 2 cut(s) 1216, 1350
BsnI GGCC 2 cut(s) 516, 951
BsoBI CYCGRG 2 cut(s) 890, 967
Bsp1286I GDGCHC 3 cut(s) 641, 891, 1312
Bsp1407I TGTACA 1 cut(s) 714
Bsp143I GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
Bsp19I CCATGG 2 cut(s) 1112, 1340
BspACI CCGC 7 cut(s) 153, 339, 441, 513, 554, 651, 1259
BspANI GGCC 2 cut(s) 516, 951
BspCNI CTCAG 1 cut(s) 607
BspHI TCATGA 2 cut(s) 1066, 1192
BspLI GGNNCC 2 cut(s) 196, 285
BspMI ACCTGC 1 cut(s) 1079
BspOI GCTAGC 1 cut(s) 1362
BspPI GGATC 3 cut(s) 265, 656, 1330
BspQI GCTCTTC 1 cut(s) 867
BsrBI CCGCTC 1 cut(s) 1259
BsrDI GCAATG 1 cut(s) 287
BsrGI TGTACA 1 cut(s) 714
BsrI ACTGG 2 cut(s) 196, 272
BssECI CCNNGG 4 cut(s) 953, 1049, 1112, 1340
BssMI GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
BssSI CACGAG 2 cut(s) 130, 1123
BssT1I CCWWGG 3 cut(s) 953, 1112, 1340
Bst2BI CACGAG 2 cut(s) 130, 1123
Bst2UI CCWGG 2 cut(s) 278, 1050
Bst4CI ACNGT 2 cut(s) 604, 934
Bst6I CTCTTC 2 cut(s) 568, 867
BstAUI TGTACA 1 cut(s) 714
BstC8I GCNNGC 2 cut(s) 1217, 1360
BstDEI CTNAG 1 cut(s) 615
BstDSI CCRYGG 2 cut(s) 1112, 1340
BstF5I GGATG 1 cut(s) 486
BstKTI GATC 6 cut(s) 238, 260, 315, 361, 664, 1338
BstMAI GTCTC 3 cut(s) 127, 321, 544
BstMBI GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
BstMCI CGRYCG 1 cut(s) 517
BstMWI GCNNNNNNNGC 2 cut(s) 152, 164
BstNI CCWGG 2 cut(s) 278, 1050
BstNSI RCATGY 5 cut(s) 47, 415, 1139, 1174, 1327
BstSCI CCNGG 3 cut(s) 276, 759, 1048
BstV1I GCAGC 6 cut(s) 112, 134, 167, 170, 1317, 1339
BstXI CCANNNNNNTGG 1 cut(s) 1378
BstZI CGGCCG 1 cut(s) 514
BsuI GTATCC 1 cut(s) 63
BsuRI GGCC 2 cut(s) 516, 951
BtgI CCRYGG 2 cut(s) 1112, 1340
BtgZI GCGATG 1 cut(s) 865
BtrI CACGTC 1 cut(s) 720
BtsCI GGATG 1 cut(s) 486
BtsIMutI CAGTG 2 cut(s) 600, 939
BveI ACCTGC 1 cut(s) 1079
Cac8I GCNNGC 2 cut(s) 1217, 1360
CaiI CAGNNNCTG 1 cut(s) 167
CciI TCATGA 2 cut(s) 1066, 1192
Cfr13I GGNCC 1 cut(s) 950
CsiI ACCWGGT 1 cut(s) 276
Csp6I GTAC 4 cut(s) 460, 715, 802, 1154
CviQI GTAC 4 cut(s) 460, 715, 802, 1154
DdeI CTNAG 1 cut(s) 615
DpnI GATC 6 cut(s) 237, 259, 314, 360, 663, 1337
DpnII GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
EaeI YGGCCR 1 cut(s) 514
EagI CGGCCG 1 cut(s) 514
Eam1104I CTCTTC 2 cut(s) 568, 867
EarI CTCTTC 2 cut(s) 568, 867
Ecl136II GAGCTC 2 cut(s) 639, 889
EclXI CGGCCG 1 cut(s) 514
Eco130I CCWWGG 3 cut(s) 953, 1112, 1340
Eco24I GRGCYC 2 cut(s) 641, 891
Eco52I CGGCCG 1 cut(s) 514
Eco53kI GAGCTC 2 cut(s) 639, 889
Eco57I CTGAAG 4 cut(s) 135, 189, 577, 1373
Eco88I CYCGRG 2 cut(s) 890, 967
EcoICRI GAGCTC 2 cut(s) 639, 889
EcoRII CCWGG 2 cut(s) 276, 1048
EcoT14I CCWWGG 3 cut(s) 953, 1112, 1340
EcoT38I GRGCYC 2 cut(s) 641, 891
ErhI CCWWGG 3 cut(s) 953, 1112, 1340
Esp3I CGTCTC 1 cut(s) 544
FaqI GGGAC 2 cut(s) 1216, 1350
FauI CCCGC 1 cut(s) 658
FbaI TGATCA 1 cut(s) 235
Fnu4HI GCNGC 7 cut(s) 123, 126, 156, 159, 514, 1328, 1331
FokI GGATG 1 cut(s) 473
FriOI GRGCYC 2 cut(s) 641, 891
Fsp4HI GCNGC 7 cut(s) 123, 126, 156, 159, 514, 1328, 1331
FspBI CTAG 6 cut(s) 219, 225, 749, 1151, 1278, 1359
GluI GCNGC 7 cut(s) 123, 126, 156, 159, 514, 1328, 1331
GsaI CCCAGC 1 cut(s) 216
GsuI CTGGAG 2 cut(s) 213, 459
HaeIII GGCC 2 cut(s) 516, 951
HapII CCGG 2 cut(s) 304, 760
HinfI GANTC 6 cut(s) 13, 506, 695, 1236, 1243, 1393
HpaII CCGG 2 cut(s) 304, 760
HphI GGTGA 5 cut(s) 328, 445, 821, 1103, 1393
Hpy166II GTNNAC 2 cut(s) 717, 1384
Hpy188I TCNGA 7 cut(s) 419, 547, 596, 724, 778, 947, 1392
Hpy188III TCNNGA 8 cut(s) 362, 476, 699, 912, 1067, 1193, 1240, 1291
Hpy8I GTNNAC 2 cut(s) 717, 1384
HpyAV CCTTC 4 cut(s) 601, 997, 1191, 1397
HpyCH4III ACNGT 2 cut(s) 604, 934
HpyCH4IV ACGT 2 cut(s) 50, 719
HpyCH4V TGCA 6 cut(s) 292, 393, 626, 1133, 1174, 1327
HpyF10VI GCNNNNNNNGC 2 cut(s) 152, 164
HpyF3I CTNAG 1 cut(s) 615
HpySE526I ACGT 2 cut(s) 50, 719
Ksp22I TGATCA 1 cut(s) 235
Kzo9I GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
LguI GCTCTTC 1 cut(s) 867
LmnI GCTCC 2 cut(s) 194, 1256
Lsp1109I GCAGC 6 cut(s) 112, 134, 167, 170, 1317, 1339
LweI GCATC 2 cut(s) 541, 1035
MabI ACCWGGT 1 cut(s) 276
MaeI CTAG 6 cut(s) 219, 225, 749, 1151, 1278, 1359
MaeII ACGT 2 cut(s) 50, 719
MaeIII GTNAC 8 cut(s) 46, 79, 175, 334, 344, 451, 586, 604
MalI GATC 6 cut(s) 237, 259, 314, 360, 663, 1337
MbiI CCGCTC 1 cut(s) 1259
MboI GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
MboII GAAGA 5 cut(s) 582, 585, 854, 857, 1156
MfeI CAATTG 1 cut(s) 388
MhlI GDGCHC 3 cut(s) 641, 891, 1312
MluCI AATT 6 cut(s) 93, 388, 436, 907, 992, 1072
MlyI GAGTC 2 cut(s) 515, 1245
MmeI TCCRAC 3 cut(s) 406, 500, 940
MroXI GAANNNNTTC 2 cut(s) 768, 1351
MseI TTAA 5 cut(s) 204, 558, 818, 896, 1020
MslI CAYNNNNRTG 2 cut(s) 32, 827
MspA1I CMGCKG 2 cut(s) 125, 1330
MspI CCGG 2 cut(s) 304, 760
MspR9I CCNGG 3 cut(s) 278, 761, 1050
MunI CAATTG 1 cut(s) 388
MvaI CCWGG 2 cut(s) 278, 1050
MwoI GCNNNNNNNGC 2 cut(s) 152, 164
NciI CCSGG 1 cut(s) 761
NcoI CCATGG 2 cut(s) 1112, 1340
NdeII GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
NheI GCTAGC 1 cut(s) 1358
NlaIV GGNNCC 2 cut(s) 196, 285
NmuCI GTSAC 3 cut(s) 46, 334, 451
NspI RCATGY 5 cut(s) 47, 415, 1139, 1174, 1327
PagI TCATGA 2 cut(s) 1066, 1192
PaqCI CACCTGC 1 cut(s) 1079
PciI ACATGT 3 cut(s) 43, 411, 1135
PciSI GCTCTTC 1 cut(s) 867
PcsI WCGNNNNNNNCGW 2 cut(s) 782, 923
PdmI GAANNNNTTC 2 cut(s) 768, 1351
PfeI GAWTC 4 cut(s) 13, 695, 1243, 1393
PflFI GACNNNGTC 1 cut(s) 332
PflMI CCANNNNNTGG 1 cut(s) 959
PkrI GCNGC 7 cut(s) 124, 127, 157, 160, 515, 1329, 1332
PleI GAGTC 2 cut(s) 514, 1244
PpsI GAGTC 2 cut(s) 514, 1244
PscI ACATGT 3 cut(s) 43, 411, 1135
Psp124BI GAGCTC 2 cut(s) 641, 891
Psp6I CCWGG 2 cut(s) 276, 1048
PspFI CCCAGC 1 cut(s) 212
PspGI CCWGG 2 cut(s) 276, 1048
PspN4I GGNNCC 2 cut(s) 196, 285
PspPI GGNCC 1 cut(s) 950
PsrI GAACNNNNNNTAC 2 cut(s) 835, 867
PstNI CAGNNNCTG 1 cut(s) 167
PsyI GACNNNGTC 1 cut(s) 332
PvuII CAGCTG 2 cut(s) 125, 1330
RsaI GTAC 4 cut(s) 461, 716, 803, 1155
RsaNI GTAC 4 cut(s) 460, 715, 802, 1154
RseI CAYNNNNRTG 2 cut(s) 32, 827
SacI GAGCTC 2 cut(s) 641, 891
SapI GCTCTTC 1 cut(s) 867
SaqAI TTAA 5 cut(s) 204, 558, 818, 896, 1020
SatI GCNGC 7 cut(s) 123, 126, 156, 159, 514, 1328, 1331
Sau3AI GATC 6 cut(s) 235, 257, 312, 358, 661, 1335
Sau96I GGNCC 1 cut(s) 950
ScaI AGTACT 1 cut(s) 1155
SchI GAGTC 2 cut(s) 515, 1245
ScrFI CCNGG 3 cut(s) 278, 761, 1050
SduI GDGCHC 3 cut(s) 641, 891, 1312
SexAI ACCWGGT 1 cut(s) 276
SfaNI GCATC 2 cut(s) 541, 1035
SmiMI CAYNNNNRTG 2 cut(s) 32, 827
SpeI ACTAGT 2 cut(s) 224, 1150
Sse9I AATT 6 cut(s) 93, 388, 436, 907, 992, 1072
SsiI CCGC 7 cut(s) 153, 339, 441, 513, 554, 651, 1259
SspI AATATT 1 cut(s) 202
SspMI CTAG 6 cut(s) 219, 225, 749, 1151, 1278, 1359
SstI GAGCTC 2 cut(s) 641, 891
StyD4I CCNGG 3 cut(s) 276, 759, 1048
StyI CCWWGG 3 cut(s) 953, 1112, 1340
TaaI ACNGT 2 cut(s) 604, 934
TaiI ACGT 2 cut(s) 53, 722
TaqI TCGA 4 cut(s) 363, 660, 785, 1312
TasI AATT 6 cut(s) 93, 388, 436, 907, 992, 1072
TatI WGTACW 4 cut(s) 459, 714, 801, 1153
TauI GCSGC 1 cut(s) 516
TfiI GAWTC 4 cut(s) 13, 695, 1243, 1393
Tru1I TTAA 5 cut(s) 204, 558, 818, 896, 1020
Tru9I TTAA 5 cut(s) 204, 558, 818, 896, 1020
TscAI CASTG 2 cut(s) 607, 939
TseFI GTSAC 3 cut(s) 46, 334, 451
TseI GCWGC 6 cut(s) 122, 125, 155, 158, 1327, 1330
Tsp45I GTSAC 3 cut(s) 46, 334, 451
TspDTI ATGAA 9 cut(s) 50, 462, 741, 843, 1083, 1173, 1181, 1283, 1313
TspGWI ACGGA 2 cut(s) 339, 414
TspRI CASTG 2 cut(s) 607, 939
Tth111I GACNNNGTC 1 cut(s) 332
Van91I CCANNNNNTGG 1 cut(s) 959
XapI RAATTY 2 cut(s) 93, 1072
XceI RCATGY 5 cut(s) 47, 415, 1139, 1174, 1327
XcmI CCANNNNNNNNNTGG 2 cut(s) 740, 1375
XmnI GAANNNNTTC 2 cut(s) 768, 1351
XspI CTAG 6 cut(s) 219, 225, 749, 1151, 1278, 1359
ZrmI AGTACT 1 cut(s) 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.