pycom05g20130

Peptidase, trypsin-like serine and cysteine proteases

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
23010144 .. 23012399
2256 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g20130.5

Sequence Viewer

Length: 1509 bp
ATGAGAATGCGTTGTTCTGGTTCAACACTGTCAGATGAGTCAGCTTTGGATCTTGAGAGAAACTGTTGCAGTCATTCTAATTTGCCTTCGTTAAGTCCACCAACACTTCAACCCTTTGCATCAGCTGGACAGCATTGTGAGACTAACGCTGCTTACTTCTCGTGGCCTACCTCAAGCCGATTGAATGATACTGCTGAAGAGAGGGCAAACTATTTCACTAATCTACAGAAGGGGCTCCTTCCTGAAATTCTTGGCCAGTTGCCGAAGGGGCAGCAAGCGACTACATTGCTTGAACTGATGACTATTAGGGCATTTCACAGCAAGATTTTGCGATGTTATAGTCTTGGAACAGCAATTGGGTTTCGTATTCGACGGGGTGTGTTAACTGACATACCAGCTATTCTTGTCTTTGTTTCAAGAAAAGTTCACAAGAAATGGCTCAGCCCAATACAGTGTTTACCTACTGCCCTAGAGGGACCTGGAGGTATATGGTGCGATGTGGATGTTGTGGAATTCTCATATTTTGGTGCACCCGAGCCAGCTCCCAAAGAACAATTGTACACAGAAATTGTAGATGATTTGCGTGGAGGTGATCCATGCATTGGCTCAGGTTCTCAGGTGGCAAGCCAAGAAACATATGGAACATTGGGTGCTATAGTAAGGAGCCAAACAGGCAACCAACAAGTTGGTTTTCTCACAAATCGGCATGTTGCGGTTGACTTGGATTACCCAAATCAGAAGATGTTTCATCCCCTGCCTCCTTCGCTTGGACCTGGGGTATATCTTGGTGCGGTGGAGAGAGCTACCTCATTTATCACAGATGAGCTTTGGTATGGCATCTTTGCCGGAATTAACCCAGAGACGTTTGTGAGAGCAGATGGGGCATTCATTCCTTTTGCTGATGATTTTGACATGTGTACTGTTATTACATCCATGAAAGGAGTAGGTGAGATTGGCAATGTTAAGATTATTGACTTGCAGTCTCCGATTAGTACCCTTATTGGAAAGCAGGTGATGAAGGTTGGAAGAAGTTCTGGTTTGACTGCTGGAACCGTGTTGGCCTATGCTCTTGAGTACAATGACGAGAAAGGCATATGCTTCTTAACTGATTTTCTTGTGGTTGGTGAGAACCAACAGACATTTGACCTCGAAGGAGACAGCGGGAGCCTGATAGTACTCAAAGGTGTGAATGGTGAGAAGCCACGACCAATTGGGATTATATGGGGTGGTACTGCTAACCGAGGACGACTTAAATTAAAAATTGGTCAACCTCCTGAGAATTGGACAAGCGGAGTTGATCTTGGACGTCTTCTGAAGCTCCTTGAACTTGACATCATTACAACTGATGAAGGGCTTAGAGTGGCTGTACAAGAACAAAGGACTGCTTCAGCAACGGTAATTGGATCCATCCTGTTGGCGACTCTTCCCCTCCAGATGCGATGCTTCGAAAAGAAACATCTGAGGAGAAGTTTGAGTCACTGGGTCTTCAAATTCAGCATCTTCCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

503

Amino Acids

54.92

Weight (kDa)

6.12

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1000
AatII GACGTC 1 cut(s) 1309
Acc36I ACCTGC 1 cut(s) 1000
AccB7I CCANNNNNTGG 1 cut(s) 602
AciI CCGC 4 cut(s) 713, 791, 1161, 1290
AclWI GGATC 4 cut(s) 57, 587, 1398, 1411
AcoI YGGCCR 1 cut(s) 253
AcsI RAATTY 3 cut(s) 246, 512, 1490
AcuI CTGAAG 3 cut(s) 216, 1334, 1371
AcyI GRCGYC 1 cut(s) 1306
AfaI GTAC 7 cut(s) 560, 919, 994, 1076, 1176, 1231, 1368
AfiI CCNNNNNNNGG 2 cut(s) 602, 767
AflIII ACRYGT 1 cut(s) 912
AgsI TTSAA 7 cut(s) 24, 110, 184, 293, 417, 1325, 1489
AhdI GACNNNNNGTC 1 cut(s) 979
AjnI CCWGG 2 cut(s) 478, 772
AluBI AGCT 7 cut(s) 44, 125, 398, 542, 803, 826, 1318
AluI AGCT 7 cut(s) 44, 125, 398, 542, 803, 826, 1318
Alw21I GWGCWC 1 cut(s) 532
Alw26I GTCTC 4 cut(s) 134, 854, 987, 1149
Alw44I GTGCAC 1 cut(s) 528
AlwI GGATC 4 cut(s) 57, 587, 1398, 1411
Ama87I CYCGRG 1 cut(s) 533
AoxI GGCC 3 cut(s) 164, 253, 1059
ApaLI GTGCAC 1 cut(s) 528
ApeKI GCWGC 2 cut(s) 149, 271
ApoI RAATTY 3 cut(s) 246, 512, 1490
Asp700I GAANNNNTTC 1 cut(s) 1030
AspS9I GGNCC 2 cut(s) 476, 770
AsuHPI GGTGA 5 cut(s) 602, 959, 1024, 1136, 1205
AsuII TTCGAA 1 cut(s) 1446
AvaI CYCGRG 1 cut(s) 533
AvaII GGWCC 2 cut(s) 476, 770
BaeGI GKGCMC 1 cut(s) 532
BalI TGGCCA 1 cut(s) 255
BamHI GGATCC 1 cut(s) 1403
BanII GRGCYC 1 cut(s) 237
BauI CACGAG 1 cut(s) 160
BbsI GAAGAC 2 cut(s) 1301, 1477
Bbv12I GWGCWC 1 cut(s) 532
BbvI GCAGC 2 cut(s) 136, 283
BccI CCATC 2 cut(s) 872, 1415
BcgI CGANNNNNNTGC 2 cut(s) 268, 302
BciT130I CCWGG 2 cut(s) 480, 774
BcoDI GTCTC 4 cut(s) 134, 854, 987, 1149
BfaI CTAG 1 cut(s) 470
BfmI CTRYAG 2 cut(s) 224, 654
BfuAI ACCTGC 1 cut(s) 1000
BglI GCCNNNNNGGC 2 cut(s) 268, 672
BisI GCNGC 2 cut(s) 150, 272
BlpI GCTNAGC 1 cut(s) 440
BlsI GCNGC 2 cut(s) 151, 273
BmcAI AGTACT 1 cut(s) 1176
Bme1390I CCNGG 2 cut(s) 480, 774
Bme18I GGWCC 2 cut(s) 476, 770
BmeRI GACNNNNNGTC 1 cut(s) 979
BmeT110I CYCGRG 1 cut(s) 533
BmgT120I GGNCC 2 cut(s) 476, 770
BmiI GGNNCC 6 cut(s) 236, 477, 665, 1051, 1166, 1405
BmrFI CCNGG 2 cut(s) 480, 774
BmrI ACTGGG 1 cut(s) 1489
BmsI GCATC 4 cut(s) 128, 846, 1425, 1430
BmuI ACTGGG 1 cut(s) 1489
BpiI GAAGAC 2 cut(s) 1301, 1477
BpmI CTGGAG 2 cut(s) 501, 1415
Bpu10I CCTNAGC 1 cut(s) 607
Bpu1102I GCTNAGC 1 cut(s) 440
Bpu14I TTCGAA 1 cut(s) 1446
BpuEI CTTGAG 3 cut(s) 74, 157, 1091
BsaHI GRCGYC 1 cut(s) 1306
BsaJI CCNNGG 2 cut(s) 773, 1240
Bsc4I CCNNNNNNNGG 2 cut(s) 602, 767
Bse1I ACTGG 2 cut(s) 256, 1484
Bse3DI GCAATG 2 cut(s) 284, 964
BseBI CCWGG 2 cut(s) 480, 774
BseDI CCNNGG 2 cut(s) 773, 1240
BseGI GGATG 4 cut(s) 508, 748, 929, 1407
BseLI CCNNNNNNNGG 2 cut(s) 602, 767
BseMI GCAATG 2 cut(s) 284, 964
BseMII CTCAG 5 cut(s) 454, 621, 629, 1266, 1451
BseNI ACTGG 2 cut(s) 256, 1484
BseRI GAGGAG 1 cut(s) 1477
BseSI GKGCMC 1 cut(s) 532
BseXI GCAGC 2 cut(s) 136, 283
BshFI GGCC 3 cut(s) 166, 255, 1061
BsiHKAI GWGCWC 1 cut(s) 532
BsiHKCI CYCGRG 1 cut(s) 533
BsiSI CCGG 1 cut(s) 846
BslFI GGGAC 1 cut(s) 489
BslI CCNNNNNNNGG 2 cut(s) 602, 767
BsmAI GTCTC 4 cut(s) 134, 854, 987, 1149
BsmBI CGTCTC 1 cut(s) 854
BsmFI GGGAC 1 cut(s) 489
BsmI GAATGC 2 cut(s) 12, 884
BsnI GGCC 3 cut(s) 166, 255, 1061
BsoBI CYCGRG 1 cut(s) 533
Bsp119I TTCGAA 1 cut(s) 1446
Bsp1286I GDGCHC 2 cut(s) 237, 532
Bsp1407I TGTACA 2 cut(s) 558, 1366
Bsp143I GATC 4 cut(s) 49, 592, 1297, 1403
Bsp1720I GCTNAGC 1 cut(s) 440
BspACI CCGC 4 cut(s) 713, 791, 1161, 1290
BspANI GGCC 3 cut(s) 166, 255, 1061
BspCNI CTCAG 5 cut(s) 453, 620, 628, 1267, 1452
BspLI GGNNCC 6 cut(s) 236, 477, 665, 1051, 1166, 1405
BspMI ACCTGC 1 cut(s) 1000
BspPI GGATC 4 cut(s) 57, 587, 1398, 1411
BspT104I TTCGAA 1 cut(s) 1446
BsrDI GCAATG 2 cut(s) 284, 964
BsrGI TGTACA 2 cut(s) 558, 1366
BsrI ACTGG 2 cut(s) 256, 1484
BssECI CCNNGG 2 cut(s) 773, 1240
BssMI GATC 4 cut(s) 49, 592, 1297, 1403
BssNI GRCGYC 1 cut(s) 1306
BssSI CACGAG 1 cut(s) 160
Bst2BI CACGAG 1 cut(s) 160
Bst2UI CCWGG 2 cut(s) 480, 774
Bst4CI ACNGT 6 cut(s) 30, 65, 453, 922, 1054, 1396
Bst6I CTCTTC 2 cut(s) 192, 1428
BstACI GRCGYC 1 cut(s) 1306
BstAUI TGTACA 2 cut(s) 558, 1366
BstBI TTCGAA 1 cut(s) 1446
BstC8I GCNNGC 3 cut(s) 276, 540, 625
BstDEI CTNAG 6 cut(s) 440, 607, 615, 1275, 1355, 1460
BstF5I GGATG 4 cut(s) 508, 748, 929, 1407
BstKTI GATC 4 cut(s) 52, 595, 1300, 1406
BstMAI GTCTC 4 cut(s) 134, 854, 987, 1149
BstMBI GATC 4 cut(s) 49, 592, 1297, 1403
BstMWI GCNNNNNNNGC 4 cut(s) 268, 672, 763, 881
BstNI CCWGG 2 cut(s) 480, 774
BstNSI RCATGY 2 cut(s) 710, 916
BstSCI CCNGG 2 cut(s) 478, 772
BstSFI CTRYAG 2 cut(s) 224, 654
BstSLI GKGCMC 1 cut(s) 532
BstV1I GCAGC 2 cut(s) 136, 283
BstV2I GAAGAC 2 cut(s) 1301, 1477
BstX2I RGATCY 2 cut(s) 49, 1403
BstXI CCANNNNNNTGG 2 cut(s) 686, 1414
BstYI RGATCY 2 cut(s) 49, 1403
BsuRI GGCC 3 cut(s) 166, 255, 1061
BtgZI GCGATG 3 cut(s) 346, 510, 1453
BtsCI GGATG 4 cut(s) 508, 748, 929, 1407
BtsIMutI CAGTG 3 cut(s) 26, 458, 1477
BveI ACCTGC 1 cut(s) 1000
Cac8I GCNNGC 3 cut(s) 276, 540, 625
Cfr13I GGNCC 2 cut(s) 476, 770
Csp6I GTAC 7 cut(s) 559, 918, 993, 1075, 1175, 1230, 1367
CviAII CATG 4 cut(s) 597, 707, 913, 934
CviQI GTAC 7 cut(s) 559, 918, 993, 1075, 1175, 1230, 1367
DdeI CTNAG 6 cut(s) 440, 607, 615, 1275, 1355, 1460
DpnI GATC 4 cut(s) 51, 594, 1299, 1405
DpnII GATC 4 cut(s) 49, 592, 1297, 1403
DriI GACNNNNNGTC 1 cut(s) 979
EaeI YGGCCR 1 cut(s) 253
Eam1104I CTCTTC 2 cut(s) 192, 1428
Eam1105I GACNNNNNGTC 1 cut(s) 979
EarI CTCTTC 2 cut(s) 192, 1428
Eco24I GRGCYC 1 cut(s) 237
Eco47I GGWCC 2 cut(s) 476, 770
Eco57I CTGAAG 3 cut(s) 216, 1334, 1371
Eco88I CYCGRG 1 cut(s) 533
EcoO109I RGGNCCY 1 cut(s) 476
EcoRI GAATTC 1 cut(s) 512
EcoRII CCWGG 2 cut(s) 478, 772
EcoT22I ATGCAT 1 cut(s) 602
EcoT38I GRGCYC 1 cut(s) 237
Esp3I CGTCTC 1 cut(s) 854
FaeI CATG 4 cut(s) 600, 710, 916, 937
FalI AAGNNNNNCTT 2 cut(s) 1369, 1401
FaqI GGGAC 1 cut(s) 489
FatI CATG 4 cut(s) 596, 706, 912, 933
FauI CCCGC 1 cut(s) 1154
FauNDI CATATG 2 cut(s) 637, 1094
Fnu4HI GCNGC 2 cut(s) 150, 272
FokI GGATG 4 cut(s) 515, 735, 916, 1394
FriOI GRGCYC 1 cut(s) 237
Fsp4HI GCNGC 2 cut(s) 150, 272
FspBI CTAG 1 cut(s) 470
GluI GCNGC 2 cut(s) 150, 272
GsuI CTGGAG 2 cut(s) 501, 1415
HaeIII GGCC 3 cut(s) 166, 255, 1061
HapII CCGG 1 cut(s) 846
Hin1I GRCGYC 1 cut(s) 1306
Hin1II CATG 4 cut(s) 600, 710, 916, 937
HincII GTYRAC 3 cut(s) 384, 718, 1268
HindII GTYRAC 3 cut(s) 384, 718, 1268
HinfI GANTC 3 cut(s) 38, 1420, 1474
HpaI GTTAAC 1 cut(s) 384
HpaII CCGG 1 cut(s) 846
HphI GGTGA 5 cut(s) 602, 959, 1024, 1136, 1205
Hpy166II GTNNAC 9 cut(s) 98, 384, 427, 458, 530, 561, 718, 918, 1268
Hpy188I TCNGA 5 cut(s) 34, 738, 987, 1314, 1461
Hpy188III TCNNGA 6 cut(s) 53, 242, 417, 1070, 1274, 1432
Hpy8I GTNNAC 9 cut(s) 98, 384, 427, 458, 530, 561, 718, 918, 1268
Hpy99I CGWCG 1 cut(s) 375
HpyAV CCTTC 8 cut(s) 96, 223, 248, 259, 771, 1012, 1145, 1343
HpyCH4III ACNGT 6 cut(s) 30, 65, 453, 922, 1054, 1396
HpyCH4IV ACGT 2 cut(s) 863, 1306
HpyCH4V TGCA 5 cut(s) 69, 119, 530, 600, 979
HpyF10VI GCNNNNNNNGC 4 cut(s) 268, 672, 763, 881
HpyF3I CTNAG 6 cut(s) 440, 607, 615, 1275, 1355, 1460
HpySE526I ACGT 2 cut(s) 863, 1306
Hsp92I GRCGYC 1 cut(s) 1306
Hsp92II CATG 4 cut(s) 600, 710, 916, 937
KspAI GTTAAC 1 cut(s) 384
Kzo9I GATC 4 cut(s) 49, 592, 1297, 1403
LmnI GCTCC 5 cut(s) 240, 547, 663, 1164, 1323
Lsp1109I GCAGC 2 cut(s) 136, 283
LweI GCATC 4 cut(s) 128, 846, 1425, 1430
MaeI CTAG 1 cut(s) 470
MaeII ACGT 2 cut(s) 863, 1306
MaeIII GTNAC 1 cut(s) 1475
MalI GATC 4 cut(s) 51, 594, 1299, 1405
MboI GATC 4 cut(s) 49, 592, 1297, 1403
MboII GAAGA 7 cut(s) 209, 751, 1038, 1301, 1415, 1477, 1492
MfeI CAATTG 3 cut(s) 354, 554, 1209
MflI RGATCY 2 cut(s) 49, 1403
MhlI GDGCHC 2 cut(s) 237, 532
MlsI TGGCCA 1 cut(s) 255
MluNI TGGCCA 1 cut(s) 255
MlyI GAGTC 3 cut(s) 47, 1414, 1483
MmeI TCCRAC 1 cut(s) 1003
Mox20I TGGCCA 1 cut(s) 255
Mph1103I ATGCAT 1 cut(s) 602
MroXI GAANNNNTTC 1 cut(s) 1030
MscI TGGCCA 1 cut(s) 255
MseI TTAA 7 cut(s) 92, 383, 852, 963, 1103, 1251, 1256
Msp20I TGGCCA 1 cut(s) 255
MspA1I CMGCKG 2 cut(s) 125, 1161
MspI CCGG 1 cut(s) 846
MspR9I CCNGG 2 cut(s) 480, 774
MunI CAATTG 3 cut(s) 354, 554, 1209
Mva1269I GAATGC 2 cut(s) 12, 884
MvaI CCWGG 2 cut(s) 480, 774
MwoI GCNNNNNNNGC 4 cut(s) 268, 672, 763, 881
NdeI CATATG 2 cut(s) 637, 1094
NdeII GATC 4 cut(s) 49, 592, 1297, 1403
NlaIII CATG 4 cut(s) 600, 710, 916, 937
NlaIV GGNNCC 6 cut(s) 236, 477, 665, 1051, 1166, 1405
NmuCI GTSAC 1 cut(s) 1475
NsiI ATGCAT 1 cut(s) 602
NspI RCATGY 2 cut(s) 710, 916
NspV TTCGAA 1 cut(s) 1446
PaqCI CACCTGC 1 cut(s) 1000
PciI ACATGT 1 cut(s) 912
PctI GAATGC 2 cut(s) 12, 884
PdmI GAANNNNTTC 1 cut(s) 1030
PflMI CCANNNNNTGG 1 cut(s) 602
PkrI GCNGC 2 cut(s) 151, 273
PleI GAGTC 3 cut(s) 46, 1414, 1482
PpsI GAGTC 3 cut(s) 46, 1414, 1482
PpuMI RGGWCCY 1 cut(s) 476
PscI ACATGT 1 cut(s) 912
Psp5II RGGWCCY 1 cut(s) 476
Psp6I CCWGG 2 cut(s) 478, 772
PspGI CCWGG 2 cut(s) 478, 772
PspN4I GGNNCC 6 cut(s) 236, 477, 665, 1051, 1166, 1405
PspPI GGNCC 2 cut(s) 476, 770
PspPPI RGGWCCY 1 cut(s) 476
PsuI RGATCY 2 cut(s) 49, 1403
PvuII CAGCTG 1 cut(s) 125
RsaI GTAC 7 cut(s) 560, 919, 994, 1076, 1176, 1231, 1368
RsaNI GTAC 7 cut(s) 559, 918, 993, 1075, 1175, 1230, 1367
SaqAI TTAA 7 cut(s) 92, 383, 852, 963, 1103, 1251, 1256
SatI GCNGC 2 cut(s) 150, 272
Sau3AI GATC 4 cut(s) 49, 592, 1297, 1403
Sau96I GGNCC 2 cut(s) 476, 770
ScaI AGTACT 1 cut(s) 1176
SchI GAGTC 3 cut(s) 47, 1414, 1483
ScrFI CCNGG 2 cut(s) 480, 774
SduI GDGCHC 2 cut(s) 237, 532
SfaNI GCATC 4 cut(s) 128, 846, 1425, 1430
SfcI CTRYAG 2 cut(s) 224, 654
SfuI TTCGAA 1 cut(s) 1446
SinI GGWCC 2 cut(s) 476, 770
SmlI CTYRAG 3 cut(s) 53, 172, 1070
SmoI CTYRAG 3 cut(s) 53, 172, 1070
SsiI CCGC 4 cut(s) 713, 791, 1161, 1290
SspMI CTAG 1 cut(s) 470
StyD4I CCNGG 2 cut(s) 478, 772
TaaI ACNGT 6 cut(s) 30, 65, 453, 922, 1054, 1396
TaiI ACGT 2 cut(s) 866, 1309
TaqI TCGA 3 cut(s) 370, 1149, 1446
TatI WGTACW 5 cut(s) 558, 917, 1074, 1174, 1366
Tru1I TTAA 7 cut(s) 92, 383, 852, 963, 1103, 1251, 1256
Tru9I TTAA 7 cut(s) 92, 383, 852, 963, 1103, 1251, 1256
TscAI CASTG 3 cut(s) 33, 458, 1484
TseFI GTSAC 1 cut(s) 1475
TseI GCWGC 2 cut(s) 149, 271
Tsp45I GTSAC 1 cut(s) 1475
TspDTI ATGAA 5 cut(s) 737, 877, 950, 1031, 1362
TspRI CASTG 3 cut(s) 33, 458, 1484
Van91I CCANNNNNTGG 1 cut(s) 602
VneI GTGCAC 1 cut(s) 528
VpaK11BI GGWCC 2 cut(s) 476, 770
XapI RAATTY 3 cut(s) 246, 512, 1490
XceI RCATGY 2 cut(s) 710, 916
XcmI CCANNNNNNNNNTGG 1 cut(s) 635
XmnI GAANNNNTTC 1 cut(s) 1030
XspI CTAG 1 cut(s) 470
ZraI GACGTC 1 cut(s) 1307
ZrmI AGTACT 1 cut(s) 1176
Zsp2I ATGCAT 1 cut(s) 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.