RLG00000032938

Peptidase, trypsin-like serine and cysteine proteases

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
21188926 .. 21193241
4316 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032938

Sequence Viewer

Length: 1386 bp
ATGGACCGGACTAGATTTAATATGAGGATGCGTTGTTCTGGTTCAACACCATCAGAGGAGTCAGCTTTAGATCTCGAGAGAACCTGTTGTAGTCATTCTAATTTGCCTTCCTTAAGTCCGCCAACACTTCAACCCTTTGCATCAGCTGGACAGCATTGTGAGACTAGTGCTGCGTACTTCTCCTGGCCTACTTCAAGTCGATTGAATGATGCAGCTGAAGAGAGGGCAAATTATTTTACTAATCTACAGAAAGGTGTCCTGCCTGAAACTCTTGGTCAATTGCCAAAAGGGCAGCAAGCGACTACATTGCTTGAACTGATGACTATAAGGGCATTTCATAGCAAGATTTTGCGGTGTTACAGTCTTGGAACAGCAATTGGCTTTCGCATTCGGCGGGGTGTGTTAACAGATATACCAGCTATCCTTGTGTTTGTTTCAAGAAAAGTTCACAAGCAATGGCTCAGCCCAATACAATGTCTACCTACTGCTCTAGAGGGGCCTGGAGGGGTATGGTGTGATGTGGATGTGGTAGAATTCTCATATTTTGGTGCACCTGAGCCTGCTCCCAAAGAACAATTGTACACTGAAATTGTAGATGATCTGCGTGGTGGTGATCTATGCATTGGCTCAGGTTCCCAGGTGGCAAGCCAGGAGACATATGGGACTTTGGGTGCTATAGTTAAAAGCCAAACTGGGAACCGACAAGTTGGTTTTCTCACAAATCGCCATGTTGCAGTTGACTTAGATTACCCAAATCAGAAAATGTTCCATCCCCTGCCCCCTTCACTTGGACCTGGTGTATACCTTGGTGCTGTAGAGAGAGCTACCTCATTTATCACAGATGAGCTCTGGTATGGCATTTTTGCTGGAATTAACCCAGAGACATTTGTGAGAGCAGACGGGGCATTTATCCCATTTTCTGATGATTTTGACATGTCTACTGTTACTACATCCGTGAAAGGTGTAGGATGGATTGGTGATGTTAAGATAATAGACTTGCAGTCTCCGATCAGTACCCTTATCGGAAAGCATGTGATGAAGGTTGGAAGAAGTTCTGGCTTGACAGCTGGAACTGTATTGGCCTATGCCCTTGAGTACAATGATGAGAAAGGCATATGTTTCTTGACTGATTTCCTTGTTGTCGGCGAGAACCAGCAGACGTTTGACCTTGAAGGAGACAGTGGAAGTCTCATAACTCTAAAAGGTGAGAATGGTGAGAAGCCACGGCCGATTGGGATCATATGGGGTGGGACTGCAAACCGAGGCCGTCTTAAATTAAAAATTGGTCAACCTCCTGAGAATTGGACAAGTGGAGTTGATCTCGGGCGTCTTCTCAATCTCCTTGAACTTGACCTCATTACAACTGATGAAGGGCTAAAAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

462

Amino Acids

50.17

Weight (kDa)

5.33

Isoelectric Point (pI)

31.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAL1_N PF25608 98 - 177 1.4e-44 NARROW LEAF 1 N-terminal domain
Nal1_C PF25819 190 - 457 4.3e-158 Nal1 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 478, 801, 938
AciI CCGC 3 cut(s) 119, 352, 394
AclWI GGATC 1 cut(s) 1244
AcoI YGGCCR 1 cut(s) 1226
AcsI RAATTY 1 cut(s) 533
AcuI CTGAAG 1 cut(s) 237
AcyI GRCGYC 1 cut(s) 1327
AfaI GTAC 4 cut(s) 176, 581, 1015, 1097
AfiI CCNNNNNNNGG 1 cut(s) 788
AflII CTTAAG 1 cut(s) 112
AflIII ACRYGT 1 cut(s) 933
AgsI TTSAA 8 cut(s) 45, 131, 195, 205, 314, 438, 1172, 1346
AhdI GACNNNNNGTC 1 cut(s) 1000
AhlI ACTAGT 1 cut(s) 164
AjnI CCWGG 5 cut(s) 182, 499, 636, 648, 793
AloI GAACNNNNNNTCC 2 cut(s) 19, 51
AluBI AGCT 7 cut(s) 65, 146, 215, 419, 824, 847, 1067
AluI AGCT 7 cut(s) 65, 146, 215, 419, 824, 847, 1067
Alw21I GWGCWC 2 cut(s) 553, 849
Alw26I GTCTC 6 cut(s) 155, 647, 875, 1008, 1170, 1193
Alw44I GTGCAC 1 cut(s) 549
AlwI GGATC 1 cut(s) 1244
Ama87I CYCGRG 2 cut(s) 74, 1322
AoxI GGCC 5 cut(s) 185, 497, 1080, 1226, 1264
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 3 cut(s) 170, 212, 292
ApoI RAATTY 1 cut(s) 533
Asp700I GAANNNNTTC 2 cut(s) 764, 1051
AspS9I GGNCC 3 cut(s) 4, 497, 791
AsuHPI GGTGA 4 cut(s) 623, 989, 1217, 1226
AvaI CYCGRG 2 cut(s) 74, 1322
AvaII GGWCC 2 cut(s) 4, 791
BaeGI GKGCMC 1 cut(s) 553
BanII GRGCYC 1 cut(s) 849
BbsI GAAGAC 1 cut(s) 1322
Bbv12I GWGCWC 2 cut(s) 553, 849
BbvI GCAGC 3 cut(s) 157, 224, 304
BccI CCATC 3 cut(s) 58, 777, 963
BceAI ACGGC 2 cut(s) 1241, 1251
BcgI CGANNNNNNTGC 2 cut(s) 289, 323
BciT130I CCWGG 5 cut(s) 184, 501, 638, 650, 795
BcoDI GTCTC 6 cut(s) 155, 647, 875, 1008, 1170, 1193
BcuI ACTAGT 1 cut(s) 164
BfaI CTAG 3 cut(s) 12, 165, 491
BfmI CTRYAG 3 cut(s) 245, 675, 813
BfrI CTTAAG 1 cut(s) 112
BglI GCCNNNNNGGC 1 cut(s) 289
BglII AGATCT 1 cut(s) 70
BisI GCNGC 3 cut(s) 171, 213, 293
BlpI GCTNAGC 1 cut(s) 461
BlsI GCNGC 3 cut(s) 172, 214, 294
Bme1390I CCNGG 5 cut(s) 184, 501, 638, 650, 795
Bme18I GGWCC 2 cut(s) 4, 791
BmeRI GACNNNNNGTC 1 cut(s) 1000
BmeT110I CYCGRG 2 cut(s) 74, 1322
BmgT120I GGNCC 3 cut(s) 4, 497, 791
BmiI GGNNCC 3 cut(s) 498, 634, 698
BmrFI CCNGG 5 cut(s) 184, 501, 638, 650, 795
BmrI ACTGGG 1 cut(s) 702
BmsI GCATC 3 cut(s) 18, 149, 199
BmuI ACTGGG 1 cut(s) 702
BpiI GAAGAC 1 cut(s) 1322
BplI GAGNNNNNCTC 2 cut(s) 1305, 1337
BpmI CTGGAG 1 cut(s) 522
Bpu10I CCTNAGC 2 cut(s) 555, 628
Bpu1102I GCTNAGC 1 cut(s) 461
BpuEI CTTGAG 1 cut(s) 1112
BsaBI GATNNNNATC 1 cut(s) 1235
BsaHI GRCGYC 1 cut(s) 1327
BsaJI CCNNGG 4 cut(s) 636, 805, 1223, 1261
BsaWI WCCGGW 1 cut(s) 6
Bsc4I CCNNNNNNNGG 1 cut(s) 788
Bse1I ACTGG 1 cut(s) 697
Bse3DI GCAATG 2 cut(s) 305, 461
Bse8I GATNNNNATC 1 cut(s) 1235
BseBI CCWGG 5 cut(s) 184, 501, 638, 650, 795
BseDI CCNNGG 4 cut(s) 636, 805, 1223, 1261
BseGI GGATG 5 cut(s) 33, 529, 769, 950, 974
BseJI GATNNNNATC 1 cut(s) 1235
BseLI CCNNNNNNNGG 1 cut(s) 788
BseMI GCAATG 2 cut(s) 305, 461
BseMII CTCAG 4 cut(s) 475, 546, 642, 1287
BseNI ACTGG 1 cut(s) 697
BseRI GAGGAG 1 cut(s) 71
BseSI GKGCMC 1 cut(s) 553
BseX3I CGGCCG 1 cut(s) 1226
BseXI GCAGC 3 cut(s) 157, 224, 304
Bsh1285I CGRYCG 1 cut(s) 1229
BshFI GGCC 5 cut(s) 187, 499, 1082, 1228, 1266
BsiEI CGRYCG 1 cut(s) 1229
BsiHKAI GWGCWC 2 cut(s) 553, 849
BsiHKCI CYCGRG 2 cut(s) 74, 1322
BsiSI CCGG 1 cut(s) 7
BslFI GGGAC 2 cut(s) 676, 1264
BslI CCNNNNNNNGG 1 cut(s) 788
BsmAI GTCTC 6 cut(s) 155, 647, 875, 1008, 1170, 1193
BsmFI GGGAC 2 cut(s) 676, 1264
BsmI GAATGC 1 cut(s) 387
BsnI GGCC 5 cut(s) 187, 499, 1082, 1228, 1266
BsoBI CYCGRG 2 cut(s) 74, 1322
Bsp1286I GDGCHC 2 cut(s) 553, 849
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
Bsp1720I GCTNAGC 1 cut(s) 461
BspACI CCGC 3 cut(s) 119, 352, 394
BspANI GGCC 5 cut(s) 187, 499, 1082, 1228, 1266
BspCNI CTCAG 4 cut(s) 474, 547, 641, 1288
BspLI GGNNCC 3 cut(s) 498, 634, 698
BspPI GGATC 1 cut(s) 1244
BspTI CTTAAG 1 cut(s) 112
BsrDI GCAATG 2 cut(s) 305, 461
BsrGI TGTACA 1 cut(s) 579
BsrI ACTGG 1 cut(s) 697
BssECI CCNNGG 4 cut(s) 636, 805, 1223, 1261
BssMI GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
BssNAI GTATAC 1 cut(s) 802
BssNI GRCGYC 1 cut(s) 1327
BssT1I CCWWGG 1 cut(s) 805
Bst1107I GTATAC 1 cut(s) 802
Bst2UI CCWGG 5 cut(s) 184, 501, 638, 650, 795
Bst4CI ACNGT 4 cut(s) 362, 943, 1075, 1181
Bst6I CTCTTC 1 cut(s) 213
BstACI GRCGYC 1 cut(s) 1327
BstAFI CTTAAG 1 cut(s) 112
BstAUI TGTACA 1 cut(s) 579
BstC8I GCNNGC 3 cut(s) 297, 561, 646
BstDEI CTNAG 5 cut(s) 461, 555, 628, 742, 1296
BstDSI CCRYGG 1 cut(s) 1223
BstF5I GGATG 5 cut(s) 33, 529, 769, 950, 974
BstKTI GATC 6 cut(s) 73, 601, 616, 1011, 1239, 1321
BstMAI GTCTC 6 cut(s) 155, 647, 875, 1008, 1170, 1193
BstMBI GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
BstMCI CGRYCG 1 cut(s) 1229
BstMWI GCNNNNNNNGC 2 cut(s) 289, 902
BstNI CCWGG 5 cut(s) 184, 501, 638, 650, 795
BstNSI RCATGY 2 cut(s) 937, 1034
BstSCI CCNGG 5 cut(s) 182, 499, 636, 648, 793
BstSFI CTRYAG 3 cut(s) 245, 675, 813
BstSLI GKGCMC 1 cut(s) 553
BstV1I GCAGC 3 cut(s) 157, 224, 304
BstV2I GAAGAC 1 cut(s) 1322
BstX2I RGATCY 1 cut(s) 70
BstYI RGATCY 1 cut(s) 70
BstZ17I GTATAC 1 cut(s) 802
BstZI CGGCCG 1 cut(s) 1226
BsuRI GGCC 5 cut(s) 187, 499, 1082, 1228, 1266
BtgI CCRYGG 1 cut(s) 1223
BtsCI GGATG 5 cut(s) 33, 529, 769, 950, 974
BtsIMutI CAGTG 2 cut(s) 582, 1186
Cac8I GCNNGC 3 cut(s) 297, 561, 646
Cfr13I GGNCC 3 cut(s) 4, 497, 791
CseI GACGC 1 cut(s) 1316
CsiI ACCWGGT 1 cut(s) 793
Csp6I GTAC 4 cut(s) 175, 580, 1014, 1096
CviAII CATG 3 cut(s) 728, 934, 1031
CviQI GTAC 4 cut(s) 175, 580, 1014, 1096
DdeI CTNAG 5 cut(s) 461, 555, 628, 742, 1296
DpnI GATC 6 cut(s) 72, 600, 615, 1010, 1238, 1320
DpnII GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
DriI GACNNNNNGTC 1 cut(s) 1000
EaeI YGGCCR 1 cut(s) 1226
EagI CGGCCG 1 cut(s) 1226
Eam1104I CTCTTC 1 cut(s) 213
Eam1105I GACNNNNNGTC 1 cut(s) 1000
EarI CTCTTC 1 cut(s) 213
EciI GGCGGA 1 cut(s) 108
Ecl136II GAGCTC 1 cut(s) 847
EclXI CGGCCG 1 cut(s) 1226
Eco130I CCWWGG 1 cut(s) 805
Eco24I GRGCYC 1 cut(s) 849
Eco47I GGWCC 2 cut(s) 4, 791
Eco52I CGGCCG 1 cut(s) 1226
Eco53kI GAGCTC 1 cut(s) 847
Eco57I CTGAAG 1 cut(s) 237
Eco88I CYCGRG 2 cut(s) 74, 1322
EcoICRI GAGCTC 1 cut(s) 847
EcoO109I RGGNCCY 1 cut(s) 497
EcoRI GAATTC 1 cut(s) 533
EcoRII CCWGG 5 cut(s) 182, 499, 636, 648, 793
EcoT14I CCWWGG 1 cut(s) 805
EcoT22I ATGCAT 1 cut(s) 623
EcoT38I GRGCYC 1 cut(s) 849
ErhI CCWWGG 1 cut(s) 805
FaeI CATG 3 cut(s) 731, 937, 1034
FaqI GGGAC 2 cut(s) 676, 1264
FatI CATG 3 cut(s) 727, 933, 1030
FauI CCCGC 1 cut(s) 387
FauNDI CATATG 3 cut(s) 658, 1115, 1241
FblI GTMKAC 3 cut(s) 478, 801, 938
Fnu4HI GCNGC 3 cut(s) 171, 213, 293
FokI GGATG 5 cut(s) 40, 536, 756, 937, 981
FriOI GRGCYC 1 cut(s) 849
Fsp4HI GCNGC 3 cut(s) 171, 213, 293
FspBI CTAG 3 cut(s) 12, 165, 491
GluI GCNGC 3 cut(s) 171, 213, 293
GsuI CTGGAG 1 cut(s) 522
HaeIII GGCC 5 cut(s) 187, 499, 1082, 1228, 1266
HapII CCGG 1 cut(s) 7
HgaI GACGC 1 cut(s) 1316
Hin1I GRCGYC 1 cut(s) 1327
Hin1II CATG 3 cut(s) 731, 937, 1034
HincII GTYRAC 3 cut(s) 405, 739, 1289
HindII GTYRAC 3 cut(s) 405, 739, 1289
HinfI GANTC 1 cut(s) 59
HpaI GTTAAC 1 cut(s) 405
HpaII CCGG 1 cut(s) 7
HphI GGTGA 4 cut(s) 623, 989, 1217, 1226
Hpy166II GTNNAC 9 cut(s) 405, 448, 479, 551, 582, 739, 802, 939, 1289
Hpy188I TCNGA 5 cut(s) 55, 759, 922, 1008, 1025
Hpy188III TCNNGA 6 cut(s) 74, 76, 438, 491, 1123, 1295
Hpy8I GTNNAC 9 cut(s) 405, 448, 479, 551, 582, 739, 802, 939, 1289
HpyAV CCTTC 5 cut(s) 117, 792, 1033, 1166, 1364
HpyCH4III ACNGT 4 cut(s) 362, 943, 1075, 1181
HpyCH4IV ACGT 1 cut(s) 1160
HpyCH4V TGCA 7 cut(s) 140, 212, 551, 621, 734, 1000, 1256
HpyF10VI GCNNNNNNNGC 2 cut(s) 289, 902
HpyF3I CTNAG 5 cut(s) 461, 555, 628, 742, 1296
HpySE526I ACGT 1 cut(s) 1160
Hsp92I GRCGYC 1 cut(s) 1327
Hsp92II CATG 3 cut(s) 731, 937, 1034
KspAI GTTAAC 1 cut(s) 405
Kzo9I GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
LmnI GCTCC 1 cut(s) 568
Lsp1109I GCAGC 3 cut(s) 157, 224, 304
LweI GCATC 3 cut(s) 18, 149, 199
MabI ACCWGGT 1 cut(s) 793
MaeI CTAG 3 cut(s) 12, 165, 491
MaeII ACGT 1 cut(s) 1160
MaeIII GTNAC 2 cut(s) 356, 943
MalI GATC 6 cut(s) 72, 600, 615, 1010, 1238, 1320
MboI GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
MboII GAAGA 3 cut(s) 230, 1059, 1322
MfeI CAATTG 3 cut(s) 278, 375, 575
MflI RGATCY 1 cut(s) 70
MhlI GDGCHC 2 cut(s) 553, 849
MlyI GAGTC 1 cut(s) 68
MmeI TCCRAC 1 cut(s) 1024
MnlI CCTC 9 cut(s) 18, 49, 216, 487, 497, 838, 1256, 1302, 1364
Mph1103I ATGCAT 1 cut(s) 623
MroXI GAANNNNTTC 2 cut(s) 764, 1051
MseI TTAA 8 cut(s) 18, 113, 404, 681, 873, 984, 1272, 1277
MspA1I CMGCKG 3 cut(s) 146, 215, 1067
MspCI CTTAAG 1 cut(s) 112
MspI CCGG 1 cut(s) 7
MspR9I CCNGG 5 cut(s) 184, 501, 638, 650, 795
MunI CAATTG 3 cut(s) 278, 375, 575
Mva1269I GAATGC 1 cut(s) 387
MvaI CCWGG 5 cut(s) 184, 501, 638, 650, 795
MwoI GCNNNNNNNGC 2 cut(s) 289, 902
NdeI CATATG 3 cut(s) 658, 1115, 1241
NdeII GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
NlaIII CATG 3 cut(s) 731, 937, 1034
NlaIV GGNNCC 3 cut(s) 498, 634, 698
NsiI ATGCAT 1 cut(s) 623
NspI RCATGY 2 cut(s) 937, 1034
PaeR7I CTCGAG 1 cut(s) 74
PciI ACATGT 1 cut(s) 933
PctI GAATGC 1 cut(s) 387
PdmI GAANNNNTTC 2 cut(s) 764, 1051
PkrI GCNGC 3 cut(s) 172, 214, 294
PleI GAGTC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 67
PscI ACATGT 1 cut(s) 933
Psp124BI GAGCTC 1 cut(s) 849
Psp6I CCWGG 5 cut(s) 182, 499, 636, 648, 793
PspGI CCWGG 5 cut(s) 182, 499, 636, 648, 793
PspN4I GGNNCC 3 cut(s) 498, 634, 698
PspPI GGNCC 3 cut(s) 4, 497, 791
PsuI RGATCY 1 cut(s) 70
PvuII CAGCTG 3 cut(s) 146, 215, 1067
RsaI GTAC 4 cut(s) 176, 581, 1015, 1097
RsaNI GTAC 4 cut(s) 175, 580, 1014, 1096
SacI GAGCTC 1 cut(s) 849
SaqAI TTAA 8 cut(s) 18, 113, 404, 681, 873, 984, 1272, 1277
SatI GCNGC 3 cut(s) 171, 213, 293
Sau3AI GATC 6 cut(s) 70, 598, 613, 1008, 1236, 1318
Sau96I GGNCC 3 cut(s) 4, 497, 791
SchI GAGTC 1 cut(s) 68
ScrFI CCNGG 5 cut(s) 184, 501, 638, 650, 795
SduI GDGCHC 2 cut(s) 553, 849
SexAI ACCWGGT 1 cut(s) 793
SfaNI GCATC 3 cut(s) 18, 149, 199
SfcI CTRYAG 3 cut(s) 245, 675, 813
Sfr274I CTCGAG 1 cut(s) 74
SinI GGWCC 2 cut(s) 4, 791
SlaI CTCGAG 1 cut(s) 74
SmlI CTYRAG 3 cut(s) 74, 112, 1091
SmoI CTYRAG 3 cut(s) 74, 112, 1091
SpeI ACTAGT 1 cut(s) 164
SsiI CCGC 3 cut(s) 119, 352, 394
SspMI CTAG 3 cut(s) 12, 165, 491
SstI GAGCTC 1 cut(s) 849
StyD4I CCNGG 5 cut(s) 182, 499, 636, 648, 793
StyI CCWWGG 1 cut(s) 805
TaaI ACNGT 4 cut(s) 362, 943, 1075, 1181
TaiI ACGT 1 cut(s) 1163
TaqI TCGA 2 cut(s) 75, 199
TatI WGTACW 2 cut(s) 579, 1095
Tru1I TTAA 8 cut(s) 18, 113, 404, 681, 873, 984, 1272, 1277
Tru9I TTAA 8 cut(s) 18, 113, 404, 681, 873, 984, 1272, 1277
TscAI CASTG 2 cut(s) 589, 1186
TseI GCWGC 3 cut(s) 170, 212, 292
TspDTI ATGAA 3 cut(s) 326, 1052, 1383
TspGWI ACGGA 1 cut(s) 943
TspRI CASTG 2 cut(s) 589, 1186
Vha464I CTTAAG 1 cut(s) 112
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 2 cut(s) 4, 791
XapI RAATTY 1 cut(s) 533
XbaI TCTAGA 1 cut(s) 490
XceI RCATGY 2 cut(s) 937, 1034
XcmI CCANNNNNNNNNTGG 1 cut(s) 656
XhoI CTCGAG 1 cut(s) 74
XmiI GTMKAC 3 cut(s) 478, 801, 938
XmnI GAANNNNTTC 2 cut(s) 764, 1051
XspI CTAG 3 cut(s) 12, 165, 491
Zsp2I ATGCAT 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.