pycom05g25620

aminoacylase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
26953615 .. 26955909
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g25620.3

Sequence Viewer

Length: 372 bp
ATGGATAAACCGAGGCCTATAGATTTCAACTGCCTCACAACCGCCGCCAGAGAGGTCAGATTGTCCAGAGCGTTGTCTCTTCCTCCGCCAACACCGCTGTGTCAGATGTTAAGCTGCAGCTCCAGGAGGACCATAACAATGGCTTCAATCCCATCCTCCACTTTTGCTTCTGGATCGACTTGGGAAAGAACAGAGGAGAGCACAAGCATTATCAATTTATTTGCTATAGAGTTTGTCAGGGAGAAAGTTTGTGAACGAAAGAAATCTAATCGAGAGAGACAGAGAGCTGGGACAAGGGTGAGAGAGAGATGGGAGGATTTTATGCAAGGGTTAAAGGGAACGAGTAAGGGAGGTATGGGTATGGGTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

124

Amino Acids

13.89

Weight (kDa)

10.05

Isoelectric Point (pI)

42.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021259)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 42, 45, 86, 95
AclWI GGATC 1 cut(s) 181
AgsI TTSAA 2 cut(s) 28, 147
AjnI CCWGG 1 cut(s) 122
AleI CACNNNNGTG 1 cut(s) 97
AluBI AGCT 3 cut(s) 114, 120, 287
AluI AGCT 3 cut(s) 114, 120, 287
Alw21I GWGCWC 1 cut(s) 203
Alw26I GTCTC 2 cut(s) 81, 271
AlwI GGATC 1 cut(s) 181
AoxI GGCC 1 cut(s) 14
ApeKI GCWGC 2 cut(s) 114, 117
AspS9I GGNCC 1 cut(s) 129
AsuHPI GGTGA 1 cut(s) 310
AvaII GGWCC 1 cut(s) 129
Bbv12I GWGCWC 1 cut(s) 203
BbvI GCAGC 2 cut(s) 101, 129
BccI CCATC 2 cut(s) 160, 303
BciT130I CCWGG 1 cut(s) 124
BcoDI GTCTC 2 cut(s) 81, 271
BfmI CTRYAG 3 cut(s) 18, 115, 225
BisI GCNGC 3 cut(s) 45, 115, 118
BlsI GCNGC 3 cut(s) 46, 116, 119
Bme1390I CCNGG 1 cut(s) 124
Bme18I GGWCC 1 cut(s) 129
BmgT120I GGNCC 1 cut(s) 129
BmrFI CCNGG 1 cut(s) 124
BpmI CTGGAG 1 cut(s) 106
BsaJI CCNNGG 1 cut(s) 11
BseBI CCWGG 1 cut(s) 124
BseDI CCNNGG 1 cut(s) 11
BseGI GGATG 1 cut(s) 152
BseRI GAGGAG 1 cut(s) 209
BseXI GCAGC 2 cut(s) 101, 129
BseYI CCCAGC 1 cut(s) 287
BshFI GGCC 1 cut(s) 16
BsiHKAI GWGCWC 1 cut(s) 203
BslFI GGGAC 1 cut(s) 304
BsmAI GTCTC 2 cut(s) 81, 271
BsmFI GGGAC 1 cut(s) 304
BsnI GGCC 1 cut(s) 16
Bsp1286I GDGCHC 1 cut(s) 203
Bsp143I GATC 1 cut(s) 173
BspACI CCGC 4 cut(s) 42, 45, 86, 95
BspANI GGCC 1 cut(s) 16
BspMAI CTGCAG 1 cut(s) 119
BspPI GGATC 1 cut(s) 181
BssECI CCNNGG 1 cut(s) 11
BssMI GATC 1 cut(s) 173
Bst2UI CCWGG 1 cut(s) 124
Bst6I CTCTTC 1 cut(s) 84
BstF5I GGATG 1 cut(s) 152
BstKTI GATC 1 cut(s) 176
BstMAI GTCTC 2 cut(s) 81, 271
BstMBI GATC 1 cut(s) 173
BstMWI GCNNNNNNNGC 1 cut(s) 94
BstNI CCWGG 1 cut(s) 124
BstSCI CCNGG 1 cut(s) 122
BstSFI CTRYAG 3 cut(s) 18, 115, 225
BstV1I GCAGC 2 cut(s) 101, 129
BstXI CCANNNNNNTGG 1 cut(s) 139
BsuRI GGCC 1 cut(s) 16
BtsCI GGATG 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 129
CviJI RGCY 5 cut(s) 16, 114, 120, 143, 287
CviKI_1 RGCY 5 cut(s) 16, 114, 120, 143, 287
DpnI GATC 1 cut(s) 175
DpnII GATC 1 cut(s) 173
Eam1104I CTCTTC 1 cut(s) 84
EarI CTCTTC 1 cut(s) 84
EciI GGCGGA 1 cut(s) 75
Eco147I AGGCCT 1 cut(s) 16
Eco47I GGWCC 1 cut(s) 129
EcoRII CCWGG 1 cut(s) 122
FaiI YATR 6 cut(s) 20, 134, 227, 323, 356, 362
FaqI GGGAC 1 cut(s) 304
Fnu4HI GCNGC 3 cut(s) 45, 115, 118
FokI GGATG 1 cut(s) 139
Fsp4HI GCNGC 3 cut(s) 45, 115, 118
GluI GCNGC 3 cut(s) 45, 115, 118
GsaI CCCAGC 1 cut(s) 291
GsuI CTGGAG 1 cut(s) 106
HaeIII GGCC 1 cut(s) 16
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 1 cut(s) 254
Hpy188I TCNGA 2 cut(s) 59, 105
Hpy188III TCNNGA 3 cut(s) 66, 171, 272
Hpy8I GTNNAC 1 cut(s) 254
HpyCH4V TGCA 2 cut(s) 117, 325
HpyF10VI GCNNNNNNNGC 1 cut(s) 94
Kzo9I GATC 1 cut(s) 173
LmnI GCTCC 1 cut(s) 125
LpnPI CCDG 7 cut(s) 61, 79, 109, 136, 156, 223, 273
Lsp1109I GCAGC 2 cut(s) 101, 129
MalI GATC 1 cut(s) 175
MboI GATC 1 cut(s) 173
MboII GAAGA 1 cut(s) 71
MhlI GDGCHC 1 cut(s) 203
MluCI AATT 1 cut(s) 214
MnlI CCTC 9 cut(s) 6, 44, 46, 93, 120, 166, 187, 307, 344
MseI TTAA 2 cut(s) 110, 332
MslI CAYNNNNRTG 2 cut(s) 97, 137
MspA1I CMGCKG 1 cut(s) 97
MspR9I CCNGG 1 cut(s) 124
MvaI CCWGG 1 cut(s) 124
MwoI GCNNNNNNNGC 1 cut(s) 94
NdeII GATC 1 cut(s) 173
OliI CACNNNNGTG 1 cut(s) 97
PceI AGGCCT 1 cut(s) 16
PfoI TCCNGGA 1 cut(s) 122
PkrI GCNGC 3 cut(s) 46, 116, 119
Psp6I CCWGG 1 cut(s) 122
PspFI CCCAGC 1 cut(s) 287
PspGI CCWGG 1 cut(s) 122
PspPI GGNCC 1 cut(s) 129
PstI CTGCAG 1 cut(s) 119
RseI CAYNNNNRTG 2 cut(s) 97, 137
SaqAI TTAA 2 cut(s) 110, 332
SatI GCNGC 3 cut(s) 45, 115, 118
Sau3AI GATC 1 cut(s) 173
Sau96I GGNCC 1 cut(s) 129
ScrFI CCNGG 1 cut(s) 124
SduI GDGCHC 1 cut(s) 203
SetI ASST 5 cut(s) 57, 116, 122, 289, 355
SfcI CTRYAG 3 cut(s) 18, 115, 225
SinI GGWCC 1 cut(s) 129
SmiMI CAYNNNNRTG 2 cut(s) 97, 137
Sse9I AATT 1 cut(s) 214
SseBI AGGCCT 1 cut(s) 16
SsiI CCGC 4 cut(s) 42, 45, 86, 95
StuI AGGCCT 1 cut(s) 16
StyD4I CCNGG 1 cut(s) 122
TaqI TCGA 2 cut(s) 176, 271
TasI AATT 1 cut(s) 214
TauI GCSGC 1 cut(s) 47
Tru1I TTAA 2 cut(s) 110, 332
Tru9I TTAA 2 cut(s) 110, 332
TseI GCWGC 2 cut(s) 114, 117
VpaK11BI GGWCC 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.