Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0010771

Physical Location & Seq

Genomic Coordinates Reverse (-)

14426410 .. 14430954

Gene Structure 4545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g09210.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGAATCCGCAAATCCGACATCCGTTGCTCTGGACCTTTGGGAGGGCCCACCGAAACAGAAAAACTGAAACACACCGAGAAAATCCCGGCCGCAAAGGAGACCCCGCCAGATTTGGATCTCTGATACAACGTTCGACTCTTTCGAACTCGATTCCGTCTTTTAATTCTTCTCAAAAATTTCTGTGGTTTCGATTTTCTAATCATTTTCTTGAAGATTCAAGCGGCAAGGAGGGCACAGAGATCCGTCCCCGGCTGGCCATGGTTAACAGAAGAGGTCAATGTAGGGAAAATGCCCTTTTCTTGTATAAGAGTTTTGGTTTGCTTTTCGGTGCTTTGAGCATTCCCCCTCTTTATGTTTATAAATGTGCATTTTCTGGAGGATTGCTCAATTACCAAACCGACGATGCGATATTTGGGGTGTTTTCAGTGATTTTTTGGACTCTTACTCTTATTTCTTTGCTAAAGTATGTCCTTGTCATGTTGAGCGCCAACGACAATGGTCAAGGTGGTGTTATTGCATTATACGCACTCCTTTGTAGAAATGCAAAATTCTGTTTGCTGCCTAATTATCAGGCATCTGATGAGGAGATCTCCACATACCGCTACCCCGGTTGTTCCAATACGAACAGGCCCACTTCTCCATTGAAAAGGTTTATCGAGAGACATAAAAGTTCAAAAACCTGTCTACTTCTTGTAGTATTATTTGGAGCTTCCATGGTGATTTGTGTTGGTATCCTCACTCCTGCAATATCAATTTTTGCATCTGTGGAGGGGCTACAATTTCAAGCAACGAATTTGCATAGTGGTGTGGTGGTTCTTATTGCCTGTATTTTATTGGTTGCCCTTTTTGTTTTGCAACACCGTGGCATCCACAAATTGGCCGTCATTTTCACTCCAATTATGATCCTTTGGCTACTGTTAATTGCTGCTGTTGGAATCTACAATATCATCGAGTGGAATCCAAGTGTATATCAGGCTCTTTCTCCTTATTACATTTACATATTCTTTAAGACGACAGGAAAAGATGGCTGGCTTTCTCTTGGAGGAATACTTTTATGTGTGACTGGAACTGAAGCCATCTTTGCGGATCTTGGCCACTTCAGAACAGCACCAGTAAGGGTTGCATTTTCTTTTGTGATTTACCCATGCCTAATACTTCAATACATGGGACAAGCTGCGTTTCTTTCGAGAAATCTATCTGCAGTATCTATGAGCTTTTTCGCTTCTGTTCCACCTCCCTTATTGTGGCCAGTACTTGTGGTTGCACCTTTGGCTGCCATTGTTGCCAGTCAACCTGTTATCTCTGCCACATTCTCAGTTGTCAAGCAGTGTCAGGCAATACGATGTTTCCCTCGCGTCAAGGTTGTACATACAAAGAGAAGGATATCTGGTCAGATATACATCCCTGAGTTGAACTGGTTTCTTATGATCATCAGTCTGGCTGTCACAATTGGATTTCAAGACACAATTCGTATAGCAAATGCTTATGGGATTGCATTTTTGGGTGTTACAATCATAACTACGTGGTTGGTATCGCTAGTCATCGACCTTGTTTGGCATCAGAGTTTCATGCTTTCCCTTTTATTTTGTGTACTTTTCGGTTCAGTTGAAGCCGTCTACCTTTCATCTTTGTGCGTGAGAATCCTCAAAGGTACATGGCTTCCCCTGGTTTTGTCTGCTGTCTTCTTGGTAGTTATGTATGTCTGGCAATATGGCACGCAGAAGAAGTATTTGTATGACTTGCATAACAAGGTTTCAATGAAGTGGATGCTCACGCTGGGTCCTAGTCTTGGCATTGTTAGGGTCCCTGGAATTGGCCTCATCTACACTGAATTGTCTACCGGAGTCCCAGCATCATTTACTCATTTCTTAACCAACCTACCGGCTTTTTACCAAGTGATTGTCTTCGTTTGTGTTAAAACTGTTCCTGTTCCTTATGTTCCCCAAAAAGAAAGGTATCTTGTTGGCCGTATTGGACCCAAATCTTTTGGGATGTACCGTTGTATGGTTCGGAATGGGTACAAAGATGTCTTTAAAAATGGGGACGACTTTGAAATTGATGTGGTGATGAGCATAGCAGAGTTCATCCAAATGGAAGCAGAAGGTTCTGGAACCCCTGAAGGCACTGTGGACCGCCGTATGGCAGTTGTGAAGACATCTGGGAAGTTTGGCACGGTGTTGGTTATGGCACAAACTTCTGGCCTTGGAGAAAGCAGCAGTTCAAGTTCTTCAGCGATTGTGAGCAGTGCCAAGTCTCCCACGCTGCAAAACTTGCAGGCCAACTACGAGCAAGAGGCACCAAAACTCAACTATTGGAGGCGGGCTCGGTTTGGATTACTGGATGCAAAATGCAAAGACTCCCACCTAAAGGAACAGCTCCAGGAACTTGTGGAAGCAAAACATGCCGGGGTAGCATATGTAATAGGTCAGGCATACTTAAAGGCGAAATGGAATTCATCGTTCTTAAAGAAGTGCGCTATCGATGTTGCCTACTCCTTCTTACGCAAGAATTGCCGCTCTCCCGCTGTTACTCTGAACATCCCTCATATTTGTTTGATCAAGGTGGGCATGAACTACATCGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0008150 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0031090 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0060560 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

862

Amino Acids

95.98

Weight (kDa)

9.53

Isoelectric Point (pI)

37.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23640
fragaria_vesca	FvH4_5g03590 FvH4_5g03590 FvH4_5g03590 FvH4_5g03590
malus_domestica	MD06G1095800.v1.1 MD14G1115800.v1.1 MD14G1115900.v1.1
prunus_persica	Prupe.5G110400_v2.0.a1
pyrus_communis	pycom06g09210
rosa_chinensis	RchiOBHm_Chr7g0196121
rosa_laevigata	RLG00000004062
rosa_multiflora	Rmu_sc0003017.1_g000008
rosa_roxburghii	Rroxscaffold_3G00259760
rosa_rugosa	Rorug07G0030800
rosa_samantha	Rh7AG156700 Rh7BG158400 Rh7CG162200 Rh7DG157500
rosa_wichuraiana	Rw7G013380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	360
AccB1I	GGYRCC	1 cut(s)	2296
AccB7I	CCANNNNNTGG	1 cut(s)	877
AccBSI	CCGCTC	1 cut(s)	2517
AccI	GTMKAC	3 cut(s)	685, 1617, 1838
AccII	CGCG	1 cut(s)	1356
AclI	AACGTT	1 cut(s)	130
AclWI	GGATC	4 cut(s)	124, 235, 898, 1095
AcoI	YGGCCR	6 cut(s)	88, 255, 879, 1093, 1247, 1966
AcsI	RAATTY	4 cut(s)	176, 548, 793, 2452
AcuI	CTGAAG	4 cut(s)	1084, 1092, 2139, 2214
AfaI	GTAC	6 cut(s)	1254, 1368, 1593, 1654, 1997, 2021
AfiI	CCNNNNNNNGG	8 cut(s)	42, 877, 1245, 1790, 1814, 2005, 2140, 2368
AjnI	CCWGG	3 cut(s)	1665, 1807, 2379
AluBI	AGCT	4 cut(s)	710, 1175, 1215, 2377
AluI	AGCT	4 cut(s)	710, 1175, 1215, 2377
Alw26I	GTCTC	3 cut(s)	93, 655, 2259
AlwI	GGATC	4 cut(s)	124, 235, 898, 1095
ApaI	GGGCCC	1 cut(s)	49
ApeKI	GCWGC	6 cut(s)	559, 926, 1175, 1274, 2214, 2263
ApoI	RAATTY	4 cut(s)	176, 548, 793, 2452
ArsI	GACNNNNNNTTYG	2 cut(s)	867, 899
AspLEI	GCGC	2 cut(s)	488, 2477
AspS9I	GGNCC	8 cut(s)	33, 45, 46, 630, 1781, 1804, 1976, 2131
AsuC2I	CCSGG	4 cut(s)	87, 250, 609, 2407
AsuHPI	GGTGA	2 cut(s)	730, 2077
AsuII	TTCGAA	1 cut(s)	143
AvaII	GGWCC	5 cut(s)	33, 1781, 1804, 1976, 2131
BaeGI	GKGCMC	2 cut(s)	49, 236
BalI	TGGCCA	3 cut(s)	257, 1095, 1249
BanI	GGYRCC	1 cut(s)	2296
BanII	GRGCYC	2 cut(s)	49, 2326
BbsI	GAAGAC	3 cut(s)	1675, 1897, 2159
BbvI	GCAGC	6 cut(s)	546, 913, 1162, 1261, 2226, 2250
BccI	CCATC	2 cut(s)	1019, 1085
BceAI	ACGGC	4 cut(s)	866, 1598, 1953, 2121
BciT130I	CCWGG	3 cut(s)	1667, 1809, 2381
BciVI	GTATCC	1 cut(s)	743
BclI	TGATCA	2 cut(s)	1428, 2556
BcnI	CCSGG	4 cut(s)	87, 250, 609, 2407
BcoDI	GTCTC	3 cut(s)	93, 655, 2259
BfaI	CTAG	2 cut(s)	1538, 1785
BfmI	CTRYAG	1 cut(s)	1200
BfoI	RGCGCY	1 cut(s)	489
BfuI	GTATCC	1 cut(s)	743
BglII	AGATCT	1 cut(s)	588
BisI	GCNGC	9 cut(s)	91, 223, 560, 927, 1176, 1275, 2215, 2264, 2515
BlsI	GCNGC	9 cut(s)	92, 224, 561, 928, 1177, 1276, 2216, 2265, 2516
BmcAI	AGTACT	1 cut(s)	1254
Bme1390I	CCNGG	7 cut(s)	87, 250, 609, 1667, 1809, 2381, 2407
Bme18I	GGWCC	5 cut(s)	33, 1781, 1804, 1976, 2131
BmgT120I	GGNCC	8 cut(s)	33, 45, 46, 630, 1781, 1804, 1976, 2131
BmiI	GGNNCC	7 cut(s)	47, 1782, 1805, 1806, 1978, 2113, 2298
BmrFI	CCNGG	7 cut(s)	87, 250, 609, 1667, 1809, 2381, 2407
BmsI	GCATC	8 cut(s)	394, 584, 770, 876, 1567, 1758, 1862, 2332
BoxI	GACNNNNGTC	1 cut(s)	498
BpiI	GAAGAC	3 cut(s)	1675, 1897, 2159
BplI	GAGNNNNNCTC	6 cut(s)	369, 401, 575, 607, 2308, 2340
BpmI	CTGGAG	2 cut(s)	396, 2363
Bpu14I	TTCGAA	1 cut(s)	143
BpuMI	CCSGG	4 cut(s)	87, 250, 609, 2407
Bsa29I	ATCGAT	1 cut(s)	2481
BsaAI	YACGTR	1 cut(s)	1524
BsaBI	GATNNNNATC	2 cut(s)	115, 1400
BsaI	GGTCTC	1 cut(s)	93
BsaJI	CCNNGG	9 cut(s)	248, 258, 607, 714, 862, 1665, 1807, 2203, 2406
BsaWI	WCCGGW	1 cut(s)	1841
Bsc4I	CCNNNNNNNGG	8 cut(s)	42, 877, 1245, 1790, 1814, 2005, 2140, 2368
Bse118I	RCCGGY	1 cut(s)	1882
Bse1I	ACTGG	6 cut(s)	1069, 1112, 1250, 1287, 1421, 2343
Bse8I	GATNNNNATC	2 cut(s)	115, 1400
BseBI	CCWGG	3 cut(s)	1667, 1809, 2381
BseCI	ATCGAT	1 cut(s)	2481
BseDI	CCNNGG	9 cut(s)	248, 258, 607, 714, 862, 1665, 1807, 2203, 2406
BseGI	GGATG	8 cut(s)	19, 867, 1401, 1773, 1998, 2085, 2347, 2538
BseJI	GATNNNNATC	2 cut(s)	115, 1400
BseLI	CCNNNNNNNGG	8 cut(s)	42, 877, 1245, 1790, 1814, 2005, 2140, 2368
BseMII	CTCAG	2 cut(s)	1329, 1398
BseNI	ACTGG	6 cut(s)	1069, 1112, 1250, 1287, 1421, 2343
BseRI	GAGGAG	1 cut(s)	599
BseSI	GKGCMC	2 cut(s)	49, 236
BseX3I	CGGCCG	1 cut(s)	88
BseXI	GCAGC	6 cut(s)	546, 913, 1162, 1261, 2226, 2250
BseYI	CCCAGC	2 cut(s)	1777, 1849
Bsh1236I	CGCG	1 cut(s)	1356
Bsh1285I	CGRYCG	1 cut(s)	91
BshNI	GGYRCC	1 cut(s)	2296
BshVI	ATCGAT	1 cut(s)	2481
BsiEI	CGRYCG	1 cut(s)	91
BsiSI	CCGG	6 cut(s)	87, 250, 609, 1842, 1883, 2406
BslFI	GGGAC	5 cut(s)	231, 1182, 1790, 1832, 2057
BslI	CCNNNNNNNGG	8 cut(s)	42, 877, 1245, 1790, 1814, 2005, 2140, 2368
BsmAI	GTCTC	3 cut(s)	93, 655, 2259
BsmFI	GGGAC	5 cut(s)	231, 1182, 1790, 1832, 2057
BsmI	GAATGC	1 cut(s)	339
Bso31I	GGTCTC	1 cut(s)	93
Bsp119I	TTCGAA	1 cut(s)	143
Bsp120I	GGGCCC	1 cut(s)	45
Bsp1286I	GDGCHC	3 cut(s)	49, 236, 2326
Bsp1407I	TGTACA	1 cut(s)	1366
Bsp143I	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
Bsp19I	CCATGG	2 cut(s)	258, 714
BspCNI	CTCAG	2 cut(s)	1328, 1399
BspDI	ATCGAT	1 cut(s)	2481
BspFNI	CGCG	1 cut(s)	1356
BspLI	GGNNCC	7 cut(s)	47, 1782, 1805, 1806, 1978, 2113, 2298
BspMAI	CTGCAG	1 cut(s)	1204
BspPI	GGATC	4 cut(s)	124, 235, 898, 1095
BspT104I	TTCGAA	1 cut(s)	143
BspT107I	GGYRCC	1 cut(s)	2296
BspTNI	GGTCTC	1 cut(s)	93
BsrBI	CCGCTC	1 cut(s)	2517
BsrFI	RCCGGY	1 cut(s)	1882
BsrGI	TGTACA	1 cut(s)	1366
BsrI	ACTGG	6 cut(s)	1069, 1112, 1250, 1287, 1421, 2343
BssAI	RCCGGY	1 cut(s)	1882
BssECI	CCNNGG	9 cut(s)	248, 258, 607, 714, 862, 1665, 1807, 2203, 2406
BssMI	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
BssT1I	CCWWGG	3 cut(s)	258, 714, 2203
Bst2UI	CCWGG	3 cut(s)	1667, 1809, 2381
Bst4CI	ACNGT	6 cut(s)	863, 918, 1924, 2000, 2128, 2176
Bst6I	CTCTTC	1 cut(s)	265
BstAPI	GCANNNNNTGC	3 cut(s)	2272, 2402, 2511
BstAUI	TGTACA	1 cut(s)	1366
BstBAI	YACGTR	1 cut(s)	1524
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	5 cut(s)	255, 1031, 1718, 2277, 2322
BstDEI	CTNAG	2 cut(s)	1315, 1407
BstDSI	CCRYGG	3 cut(s)	258, 714, 862
BstENI	CCTNNNNNAGG	1 cut(s)	40
BstF5I	GGATG	8 cut(s)	19, 867, 1401, 1773, 1998, 2085, 2347, 2538
BstFNI	CGCG	1 cut(s)	1356
BstH2I	RGCGCY	1 cut(s)	489
BstHHI	GCGC	2 cut(s)	488, 2477
BstKTI	GATC	7 cut(s)	119, 243, 591, 906, 1090, 1431, 2559
BstMAI	GTCTC	3 cut(s)	93, 655, 2259
BstMBI	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
BstMCI	CGRYCG	1 cut(s)	91
BstMWI	GCNNNNNNNGC	9 cut(s)	231, 524, 1082, 1271, 1283, 2272, 2402, 2411, 2511
BstNI	CCWGG	3 cut(s)	1667, 1809, 2381
BstNSI	RCATGY	1 cut(s)	2405
BstPAI	GACNNNNGTC	1 cut(s)	498
BstSCI	CCNGG	7 cut(s)	85, 248, 607, 1665, 1807, 2379, 2405
BstSFI	CTRYAG	1 cut(s)	1200
BstSLI	GKGCMC	2 cut(s)	49, 236
BstUI	CGCG	1 cut(s)	1356
BstV1I	GCAGC	6 cut(s)	546, 913, 1162, 1261, 2226, 2250
BstV2I	GAAGAC	3 cut(s)	1675, 1897, 2159
BstX2I	RGATCY	4 cut(s)	116, 240, 588, 1087
BstYI	RGATCY	4 cut(s)	116, 240, 588, 1087
BstZI	CGGCCG	1 cut(s)	88
Bsu15I	ATCGAT	1 cut(s)	2481
BsuI	GTATCC	1 cut(s)	743
BsuTUI	ATCGAT	1 cut(s)	2481
BtgI	CCRYGG	3 cut(s)	258, 714, 862
BtsCI	GGATG	8 cut(s)	19, 867, 1401, 1773, 1998, 2085, 2347, 2538
BtsI	GCAGTG	2 cut(s)	1334, 2251
BtsIMutI	CAGTG	5 cut(s)	432, 1334, 1827, 2124, 2251
Cac8I	GCNNGC	5 cut(s)	255, 1031, 1718, 2277, 2322
CfoI	GCGC	2 cut(s)	488, 2477
Cfr10I	RCCGGY	1 cut(s)	1882
Cfr13I	GGNCC	8 cut(s)	33, 45, 46, 630, 1781, 1804, 1976, 2131
ClaI	ATCGAT	1 cut(s)	2481
CseI	GACGC	1 cut(s)	1345
Csp6I	GTAC	6 cut(s)	1253, 1367, 1592, 1653, 1996, 2020
CviAII	CATG	9 cut(s)	259, 478, 715, 1146, 1165, 1570, 1656, 2402, 2569
CviQI	GTAC	6 cut(s)	1253, 1367, 1592, 1653, 1996, 2020
DdeI	CTNAG	2 cut(s)	1315, 1407
DpnI	GATC	7 cut(s)	118, 242, 590, 905, 1089, 1430, 2558
DpnII	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
DraI	TTTAAA	1 cut(s)	2035
EaeI	YGGCCR	6 cut(s)	88, 255, 879, 1093, 1247, 1966
EagI	CGGCCG	1 cut(s)	88
Eam1104I	CTCTTC	1 cut(s)	265
EarI	CTCTTC	1 cut(s)	265
EclXI	CGGCCG	1 cut(s)	88
Eco130I	CCWWGG	3 cut(s)	258, 714, 2203
Eco24I	GRGCYC	2 cut(s)	49, 2326
Eco31I	GGTCTC	1 cut(s)	93
Eco32I	GATATC	1 cut(s)	1386
Eco47I	GGWCC	5 cut(s)	33, 1781, 1804, 1976, 2131
Eco52I	CGGCCG	1 cut(s)	88
Eco57I	CTGAAG	4 cut(s)	1084, 1092, 2139, 2214
EcoNI	CCTNNNNNAGG	1 cut(s)	40
EcoO109I	RGGNCCY	3 cut(s)	45, 1781, 1804
EcoRI	GAATTC	1 cut(s)	2452
EcoRII	CCWGG	3 cut(s)	1665, 1807, 2379
EcoRV	GATATC	1 cut(s)	1386
EcoT14I	CCWWGG	3 cut(s)	258, 714, 2203
EcoT38I	GRGCYC	2 cut(s)	49, 2326
ErhI	CCWWGG	3 cut(s)	258, 714, 2203
FaeI	CATG	9 cut(s)	262, 481, 718, 1149, 1168, 1573, 1659, 2405, 2572
FaqI	GGGAC	5 cut(s)	231, 1182, 1790, 1832, 2057
FatI	CATG	9 cut(s)	258, 477, 714, 1145, 1164, 1569, 1655, 2401, 2568
FauI	CCCGC	3 cut(s)	112, 2313, 2530
FauNDI	CATATG	1 cut(s)	2416
FbaI	TGATCA	2 cut(s)	1428, 2556
FblI	GTMKAC	3 cut(s)	685, 1617, 1838
Fnu4HI	GCNGC	9 cut(s)	91, 223, 560, 927, 1176, 1275, 2215, 2264, 2515
FokI	GGATG	8 cut(s)	6, 854, 1388, 1780, 2005, 2072, 2354, 2525
FriOI	GRGCYC	2 cut(s)	49, 2326
Fsp4HI	GCNGC	9 cut(s)	91, 223, 560, 927, 1176, 1275, 2215, 2264, 2515
FspBI	CTAG	2 cut(s)	1538, 1785
GlaI	GCGC	2 cut(s)	487, 2476
GluI	GCNGC	9 cut(s)	91, 223, 560, 927, 1176, 1275, 2215, 2264, 2515
GsaI	CCCAGC	2 cut(s)	1781, 1853
GsuI	CTGGAG	2 cut(s)	396, 2363
HaeII	RGCGCY	1 cut(s)	489
HapII	CCGG	6 cut(s)	87, 250, 609, 1842, 1883, 2406
HgaI	GACGC	1 cut(s)	1345
HhaI	GCGC	2 cut(s)	488, 2477
Hin1II	CATG	9 cut(s)	262, 481, 718, 1149, 1168, 1573, 1659, 2405, 2572
Hin6I	GCGC	2 cut(s)	486, 2475
HinP1I	GCGC	2 cut(s)	486, 2475
HincII	GTYRAC	2 cut(s)	265, 1292
HindII	GTYRAC	2 cut(s)	265, 1292
HpaI	GTTAAC	1 cut(s)	265
HpaII	CCGG	6 cut(s)	87, 250, 609, 1842, 1883, 2406
HphI	GGTGA	2 cut(s)	730, 2077
Hpy166II	GTNNAC	7 cut(s)	265, 686, 1292, 1592, 1618, 1839, 2131
Hpy188I	TCNGA	8 cut(s)	17, 123, 580, 1103, 1395, 1563, 2013, 2535
Hpy188III	TCNNGA	7 cut(s)	31, 209, 375, 658, 1188, 1460, 2109
Hpy8I	GTNNAC	7 cut(s)	265, 686, 1292, 1592, 1618, 1839, 2131
Hpy99I	CGWCG	1 cut(s)	404
HpyAV	CCTTC	4 cut(s)	1374, 2096, 2114, 2506
HpyCH4III	ACNGT	6 cut(s)	863, 918, 1924, 2000, 2128, 2176
HpyCH4IV	ACGT	2 cut(s)	130, 1523
HpyF10VI	GCNNNNNNNGC	9 cut(s)	231, 524, 1082, 1271, 1283, 2272, 2402, 2411, 2511
HpyF3I	CTNAG	2 cut(s)	1315, 1407
HpySE526I	ACGT	2 cut(s)	130, 1523
Hsp92II	CATG	9 cut(s)	262, 481, 718, 1149, 1168, 1573, 1659, 2405, 2572
HspAI	GCGC	2 cut(s)	486, 2475
KflI	GGGWCCC	1 cut(s)	1804
Ksp22I	TGATCA	2 cut(s)	1428, 2556
KspAI	GTTAAC	1 cut(s)	265
Kzo9I	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
LmnI	GCTCC	2 cut(s)	707, 2382
Lsp1109I	GCAGC	6 cut(s)	546, 913, 1162, 1261, 2226, 2250
LweI	GCATC	8 cut(s)	394, 584, 770, 876, 1567, 1758, 1862, 2332
MaeI	CTAG	2 cut(s)	1538, 1785
MaeII	ACGT	2 cut(s)	130, 1523
MaeIII	GTNAC	4 cut(s)	1060, 1444, 1507, 2527
MalI	GATC	7 cut(s)	118, 242, 590, 905, 1089, 1430, 2558
MbiI	CCGCTC	1 cut(s)	2517
MboI	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
MboII	GAAGA	8 cut(s)	159, 224, 282, 1675, 1735, 1897, 2164, 2220
MfeI	CAATTG	1 cut(s)	1449
MflI	RGATCY	4 cut(s)	116, 240, 588, 1087
MhlI	GDGCHC	3 cut(s)	49, 236, 2326
MlsI	TGGCCA	3 cut(s)	257, 1095, 1249
MluNI	TGGCCA	3 cut(s)	257, 1095, 1249
MlyI	GAGTC	4 cut(s)	130, 433, 1854, 2351
MmeI	TCCRAC	2 cut(s)	40, 913
Mox20I	TGGCCA	3 cut(s)	257, 1095, 1249
MscI	TGGCCA	3 cut(s)	257, 1095, 1249
MseI	TTAA	9 cut(s)	162, 264, 920, 1008, 1871, 1917, 2034, 2438, 2465
MslI	CAYNNNNRTG	3 cut(s)	804, 1630, 2090
Msp20I	TGGCCA	3 cut(s)	257, 1095, 1249
MspA1I	CMGCKG	1 cut(s)	2525
MspI	CCGG	6 cut(s)	87, 250, 609, 1842, 1883, 2406
MspR9I	CCNGG	7 cut(s)	87, 250, 609, 1667, 1809, 2381, 2407
MunI	CAATTG	1 cut(s)	1449
Mva1269I	GAATGC	1 cut(s)	339
MvaI	CCWGG	3 cut(s)	1667, 1809, 2381
MvnI	CGCG	1 cut(s)	1356
MwoI	GCNNNNNNNGC	9 cut(s)	231, 524, 1082, 1271, 1283, 2272, 2402, 2411, 2511
NciI	CCSGG	4 cut(s)	87, 250, 609, 2407
NcoI	CCATGG	2 cut(s)	258, 714
NdeI	CATATG	1 cut(s)	2416
NdeII	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
NlaIII	CATG	9 cut(s)	262, 481, 718, 1149, 1168, 1573, 1659, 2405, 2572
NlaIV	GGNNCC	7 cut(s)	47, 1782, 1805, 1806, 1978, 2113, 2298
NmuCI	GTSAC	2 cut(s)	1060, 1444
NspI	RCATGY	1 cut(s)	2405
NspV	TTCGAA	1 cut(s)	143
PcsI	WCGNNNNNNNCGW	1 cut(s)	140
PctI	GAATGC	1 cut(s)	339
PfeI	GAWTC	6 cut(s)	4, 151, 215, 936, 958, 1641
PflMI	CCANNNNNTGG	1 cut(s)	877
PfoI	TCCNGGA	1 cut(s)	2379
PkrI	GCNGC	9 cut(s)	92, 224, 561, 928, 1177, 1276, 2216, 2265, 2516
PleI	GAGTC	4 cut(s)	130, 433, 1853, 2351
PpsI	GAGTC	4 cut(s)	130, 433, 1853, 2351
Ppu21I	YACGTR	1 cut(s)	1524
PpuMI	RGGWCCY	2 cut(s)	1781, 1804
PshAI	GACNNNNGTC	1 cut(s)	498
PsiI	TTATAA	1 cut(s)	360
Psp1406I	AACGTT	1 cut(s)	130
Psp5II	RGGWCCY	2 cut(s)	1781, 1804
Psp6I	CCWGG	3 cut(s)	1665, 1807, 2379
PspFI	CCCAGC	2 cut(s)	1777, 1849
PspGI	CCWGG	3 cut(s)	1665, 1807, 2379
PspN4I	GGNNCC	7 cut(s)	47, 1782, 1805, 1806, 1978, 2113, 2298
PspOMI	GGGCCC	1 cut(s)	45
PspPI	GGNCC	8 cut(s)	33, 45, 46, 630, 1781, 1804, 1976, 2131
PspPPI	RGGWCCY	2 cut(s)	1781, 1804
PstI	CTGCAG	1 cut(s)	1204
PsuI	RGATCY	4 cut(s)	116, 240, 588, 1087
RsaI	GTAC	6 cut(s)	1254, 1368, 1593, 1654, 1997, 2021
RsaNI	GTAC	6 cut(s)	1253, 1367, 1592, 1653, 1996, 2020
RseI	CAYNNNNRTG	3 cut(s)	804, 1630, 2090
SaqAI	TTAA	9 cut(s)	162, 264, 920, 1008, 1871, 1917, 2034, 2438, 2465
SatI	GCNGC	9 cut(s)	91, 223, 560, 927, 1176, 1275, 2215, 2264, 2515
Sau3AI	GATC	7 cut(s)	116, 240, 588, 903, 1087, 1428, 2556
Sau96I	GGNCC	8 cut(s)	33, 45, 46, 630, 1781, 1804, 1976, 2131
ScaI	AGTACT	1 cut(s)	1254
SchI	GAGTC	4 cut(s)	130, 433, 1854, 2351
ScrFI	CCNGG	7 cut(s)	87, 250, 609, 1667, 1809, 2381, 2407
SduI	GDGCHC	3 cut(s)	49, 236, 2326
SfaNI	GCATC	8 cut(s)	394, 584, 770, 876, 1567, 1758, 1862, 2332
SfcI	CTRYAG	1 cut(s)	1200
SfuI	TTCGAA	1 cut(s)	143
SinI	GGWCC	5 cut(s)	33, 1781, 1804, 1976, 2131
SmiMI	CAYNNNNRTG	3 cut(s)	804, 1630, 2090
SspMI	CTAG	2 cut(s)	1538, 1785
StyD4I	CCNGG	7 cut(s)	85, 248, 607, 1665, 1807, 2379, 2405
StyI	CCWWGG	3 cut(s)	258, 714, 2203
TaaI	ACNGT	6 cut(s)	863, 918, 1924, 2000, 2128, 2176
TaiI	ACGT	2 cut(s)	133, 1526
TaqI	TCGA	9 cut(s)	134, 143, 149, 190, 657, 951, 1187, 1545, 2481
TatI	WGTACW	3 cut(s)	1252, 1366, 1591
TauI	GCSGC	3 cut(s)	93, 225, 2517
TfiI	GAWTC	6 cut(s)	4, 151, 215, 936, 958, 1641
Tru1I	TTAA	9 cut(s)	162, 264, 920, 1008, 1871, 1917, 2034, 2438, 2465
Tru9I	TTAA	9 cut(s)	162, 264, 920, 1008, 1871, 1917, 2034, 2438, 2465
TscAI	CASTG	5 cut(s)	432, 1334, 1834, 2131, 2251
TseFI	GTSAC	2 cut(s)	1060, 1444
TseI	GCWGC	6 cut(s)	559, 926, 1175, 1274, 2214, 2263
Tsp45I	GTSAC	2 cut(s)	1060, 1444
TspDTI	ATGAA	7 cut(s)	17, 1558, 1614, 1775, 2074, 2445, 2585
TspGWI	ACGGA	3 cut(s)	12, 144, 233
TspRI	CASTG	5 cut(s)	432, 1334, 1834, 2131, 2251
Van91I	CCANNNNNTGG	1 cut(s)	877
VpaK11BI	GGWCC	5 cut(s)	33, 1781, 1804, 1976, 2131
XagI	CCTNNNNNAGG	1 cut(s)	40
XapI	RAATTY	4 cut(s)	176, 548, 793, 2452
XceI	RCATGY	1 cut(s)	2405
XmiI	GTMKAC	3 cut(s)	685, 1617, 1838
XspI	CTAG	2 cut(s)	1538, 1785
ZrmI	AGTACT	1 cut(s)	1254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.