Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003017.1

Orthogroup ID

OG0010771

Physical Location & Seq

Genomic Coordinates Reverse (-)

49913 .. 54845

Gene Structure 4933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003017.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

atgagatgggctaattttaaggtcaaacacgttcagccttgttccattcaagtgctaggagcaacggttttgggcttcacaagtcagattccgaaaatccgtcagaatctgccttcccgaactagatttgcatccgatacgacgccgttgcagctcgacttcgatgattcccaattttccgtttctttttttgcctttcttatttccttcagctccaaattccaggttactgagccgatcgtagacctcccacccccgccggccatggttgacagtgaaggtcaaactggacgaattctcgtcaaggcttatcggagttttggtttggtgtttggtgccttgtgcattcctcctatatatgtttttaaatgtgcattttcgggaggattgacccattaccaatctgaagatgtagtctttggggtgttttcggtgattttttggactatcactctcacttcgttgatcaagtatgctgggttcgtgttgagtgccaacgacaatggtgaaggcggggtcattgcattgtatgcattgctttgtagaaatgcgaagttgtgtttgatacctaatcatcaagcggcggatgaggagatctctacgtatcgttacccgggtcattccagcggtaacacgcccaattcgccgctgaaaaggtttattgagagacataagagtgcaaaaacctgtttacttgttctagttttgtttggagcttgtatggtgatatgcgtcggtatcctcatgcctgccatttcggttttttcatctgttgaaggcctaaaatttcaagcaaagaatctgcatgatggtgtggtggtgcttattgcatgtgttttattagttggcatatttattttgcaacaccgtggtttccacaagctgggcttcatattttctcccattctgatcctttggatactgctgattgctggtgtgggaatctacaatatcatagagtggaatccaagaatatatcaggctctttctccatattatatttacatatttttcaagagaacaggaagagatggttggatttctcttggaggaataattttatgtattactggaactgaatatatgtttgcagatcttggcaacttcaaaacaagaccaataagggtcgcattttcttctgtcatatatccatgtctaatacttcaatacatgggacaagctgcatttctttcaagaaatctatctgcagtgtctatgagcttttatgcttctgtgccagctccactaatttggcctgtacttgtggttgcacctcttgctgccattgttgccagccaacctgttatctcttccacattctcagttgtcaagcaatgccatgcaatacgatgtttcccacgtgtcaagattgttacaaacagacggatccctggtcagttatacatccctgagattaattggattcttatgattctcagcctggccatcacaattggttttcgagacacaaattatataggacatgcttatgggattgcatttttggctgcgacaatcataactacgtggttgacatcactagtcatcaaccttgtttggaatcagagtttcatcctctctcttttatttagtttactttttggttcaatggaaatcatctacctttcatcttcatgtatgaaaatccttaaaggtggatgggttccccttgttttctctgcaatcttcttggtggttatgtatgtctggcaatacggcatgaggaagaagtatacgtatgacctgcataacaaggtttcaatgaagtggatactcacgctgggtccaagtcttgggattgttagggtccctgggattggcctcatctacactgagttggctactggagtcccatcaacatttactcattttttaaccaacttaccagccttttaccaagtggttgtctttgtttgcatcaaaactgttcctgttccttgtgtgccccaaaaagaaaggtttctaattggtaggattggtcccaagtcttacggaatgtatcgatgtatgattcggaatgggtacaaagacgtctttagaagtggagatgactttgaaattgacctggtgatgagcatagcagagttcatccagatggaagcagaaggttctgaaacaccggaagggtctgtggataagcgtatggcagttgtgaggacatctgggaagttcggcacaagattggtgatgtcacaatcatctggccctggagaaagcagcagttcaggtccttcagcccttgtgggtacctgcaagtcacaggtgctgcaagatttgcaagccacgtatgagaaagaagcgccaaagctcaactactggcggcgggctcagtttgggttgctggatacaaagtacaaggatcctcgagtgagggaacagctcttggaacttgtgaatgcaaagcatgctggggcaacatatgtaataggtcactcttatttaaaggcaaagtatagttcatcgtttataaagaagtgtgctatcaacattgccttctctttcctgcgtaaaaattgccggtcgcctgctgttgctttgaacattcctcatatttgtttgattaaggtgggtgccaactatattgtgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0008150 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0031090 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0060560 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

862

Amino Acids

95.82

Weight (kDa)

9.43

Isoelectric Point (pI)

43.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23640
fragaria_vesca	FvH4_5g03590 FvH4_5g03590 FvH4_5g03590 FvH4_5g03590
malus_domestica	MD06G1095800.v1.1 MD14G1115800.v1.1 MD14G1115900.v1.1
prunus_persica	Prupe.5G110400_v2.0.a1
pyrus_communis	pycom06g09210
rosa_chinensis	RchiOBHm_Chr7g0196121
rosa_laevigata	RLG00000004062
rosa_multiflora	Rmu_sc0003017.1_g000008
rosa_roxburghii	Rroxscaffold_3G00259760
rosa_rugosa	Rorug07G0030800
rosa_samantha	Rh7AG156700 Rh7BG158400 Rh7CG162200 Rh7DG157500
rosa_wichuraiana	Rw7G013380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2468
AatII	GACGTC	1 cut(s)	2034
Acc36I	ACCTGC	2 cut(s)	1752, 2258
Acc65I	GGTACC	1 cut(s)	2246
AccB1I	GGYRCC	3 cut(s)	335, 2246, 2570
AccB7I	CCANNNNNTGG	2 cut(s)	883, 1793
AccI	GTMKAC	2 cut(s)	243, 1733
AciI	CCGC	8 cut(s)	257, 513, 581, 584, 627, 647, 2320, 2323
AclWI	GGATC	5 cut(s)	904, 1381, 1394, 2354, 2367
AcoI	YGGCCR	2 cut(s)	261, 1443
AcsI	RAATTY	3 cut(s)	218, 294, 785
AcuI	CTGAAG	3 cut(s)	193, 426, 2217
AcvI	CACGTG	1 cut(s)	1361
AcyI	GRCGYC	2 cut(s)	143, 2031
AfaI	GTAC	4 cut(s)	1260, 2024, 2248, 2354
AfiI	CCNNNNNNNGG	3 cut(s)	883, 1793, 1817
AflIII	ACRYGT	2 cut(s)	28, 1360
AhlI	ACTAGT	1 cut(s)	1540
AjnI	CCWGG	6 cut(s)	222, 1390, 1440, 1810, 2064, 2206
AjuI	GAANNNNNNNTTGG	2 cut(s)	1018, 1050
AluBI	AGCT	9 cut(s)	154, 213, 716, 883, 1181, 1221, 1241, 2308, 2380
AluI	AGCT	9 cut(s)	154, 213, 716, 883, 1181, 1221, 1241, 2308, 2380
Alw26I	GTCTC	2 cut(s)	661, 1458
AlwI	GGATC	5 cut(s)	904, 1381, 1394, 2354, 2367
AlwNI	CAGNNNCTG	2 cut(s)	109, 2266
Ama87I	CYCGRG	2 cut(s)	613, 2364
AoxI	GGCC	6 cut(s)	261, 778, 1253, 1443, 1819, 2203
ApeKI	GCWGC	6 cut(s)	151, 1181, 1280, 1508, 2217, 2266
ApoI	RAATTY	3 cut(s)	218, 294, 785
AseI	ATTAAT	1 cut(s)	1416
Asp700I	GAANNNNTTC	1 cut(s)	1959
Asp718I	GGTACC	1 cut(s)	2246
AspLEI	GCGC	1 cut(s)	2302
AspS9I	GGNCC	5 cut(s)	1784, 1807, 1979, 2204, 2228
AsuC2I	CCSGG	2 cut(s)	614, 615
AsuHPI	GGTGA	5 cut(s)	445, 518, 736, 2080, 2197
AvaI	CYCGRG	2 cut(s)	613, 2364
AvaII	GGWCC	4 cut(s)	1784, 1807, 1979, 2228
BaeGI	GKGCMC	1 cut(s)	1947
BalI	TGGCCA	1 cut(s)	1445
BamHI	GGATCC	2 cut(s)	1386, 2359
BanI	GGYRCC	3 cut(s)	335, 2246, 2570
BanII	GRGCYC	1 cut(s)	2329
BbrPI	CACGTG	1 cut(s)	1361
BbvI	GCAGC	6 cut(s)	163, 1168, 1267, 1495, 2229, 2253
BccI	CCATC	6 cut(s)	803, 1025, 1454, 1653, 1861, 2089
BceAI	ACGGC	2 cut(s)	130, 1732
BcgI	CGANNNNNNTGC	2 cut(s)	130, 164
BciT130I	CCWGG	6 cut(s)	224, 1392, 1442, 1812, 2066, 2208
BciVI	GTATCC	4 cut(s)	749, 912, 1764, 2338
BclI	TGATCA	1 cut(s)	465
BcnI	CCSGG	2 cut(s)	614, 615
BcoDI	GTCTC	2 cut(s)	661, 1458
BcuI	ACTAGT	1 cut(s)	1540
BfaI	CTAG	4 cut(s)	56, 123, 701, 1541
BfmI	CTRYAG	1 cut(s)	1206
BfoI	RGCGCY	1 cut(s)	2303
BfuAI	ACCTGC	2 cut(s)	1752, 2258
BfuI	GTATCC	4 cut(s)	749, 912, 1764, 2338
BglII	AGATCT	2 cut(s)	594, 1093
BisI	GCNGC	9 cut(s)	152, 582, 647, 1182, 1281, 1509, 2218, 2267, 2321
BlsI	GCNGC	9 cut(s)	153, 583, 648, 1183, 1282, 1510, 2219, 2268, 2322
Bme1390I	CCNGG	8 cut(s)	224, 614, 615, 1392, 1442, 1812, 2066, 2208
Bme18I	GGWCC	4 cut(s)	1784, 1807, 1979, 2228
BmeT110I	CYCGRG	2 cut(s)	613, 2364
BmgT120I	GGNCC	5 cut(s)	1784, 1807, 1979, 2204, 2228
BmrFI	CCNGG	8 cut(s)	224, 614, 615, 1392, 1442, 1812, 2066, 2208
BmsI	GCATC	2 cut(s)	140, 1926
BplI	GAGNNNNNCTC	2 cut(s)	581, 613
BpmI	CTGGAG	2 cut(s)	1866, 2229
BpuMI	CCSGG	2 cut(s)	614, 615
Bsa29I	ATCGAT	1 cut(s)	2002
BsaAI	YACGTR	5 cut(s)	603, 1361, 1527, 1737, 2286
BsaBI	GATNNNNATC	1 cut(s)	130
BsaHI	GRCGYC	2 cut(s)	143, 2031
BsaJI	CCNNGG	7 cut(s)	264, 613, 868, 1390, 1810, 1811, 2206
BsaWI	WCCGGW	1 cut(s)	2119
BsaXI	ACNNNNNCTCC	4 cut(s)	51, 81, 307, 337
Bsc4I	CCNNNNNNNGG	3 cut(s)	883, 1793, 1817
Bse118I	RCCGGY	2 cut(s)	259, 2517
Bse1I	ACTGG	4 cut(s)	292, 1075, 1849, 2321
Bse3DI	GCAATG	4 cut(s)	519, 533, 1340, 2487
Bse8I	GATNNNNATC	1 cut(s)	130
BseBI	CCWGG	6 cut(s)	224, 1392, 1442, 1812, 2066, 2208
BseCI	ATCGAT	1 cut(s)	2002
BseDI	CCNNGG	7 cut(s)	264, 613, 868, 1390, 1810, 1811, 2206
BseGI	GGATG	6 cut(s)	131, 592, 1404, 1572, 1664, 2088
BseJI	GATNNNNATC	1 cut(s)	130
BseLI	CCNNNNNNNGG	3 cut(s)	883, 1793, 1817
BseMI	GCAATG	4 cut(s)	519, 533, 1340, 2487
BseMII	CTCAG	6 cut(s)	222, 1335, 1401, 1450, 1824, 2342
BseNI	ACTGG	4 cut(s)	292, 1075, 1849, 2321
BseRI	GAGGAG	1 cut(s)	605
BseSI	GKGCMC	1 cut(s)	1947
BseXI	GCAGC	6 cut(s)	163, 1168, 1267, 1495, 2229, 2253
BseYI	CCCAGC	4 cut(s)	476, 883, 1780, 2408
Bsh1285I	CGRYCG	2 cut(s)	240, 2522
BshFI	GGCC	6 cut(s)	263, 780, 1255, 1445, 1821, 2205
BshNI	GGYRCC	3 cut(s)	335, 2246, 2570
BshVI	ATCGAT	1 cut(s)	2002
BsiEI	CGRYCG	2 cut(s)	240, 2522
BsiHKCI	CYCGRG	2 cut(s)	613, 2364
BsiSI	CCGG	4 cut(s)	260, 614, 2120, 2518
BslFI	GGGAC	4 cut(s)	1188, 1793, 1835, 1965
BslI	CCNNNNNNNGG	3 cut(s)	883, 1793, 1817
BsmAI	GTCTC	2 cut(s)	661, 1458
BsmFI	GGGAC	4 cut(s)	1188, 1793, 1835, 1965
BsmI	GAATGC	2 cut(s)	345, 2401
BsnI	GGCC	6 cut(s)	263, 780, 1255, 1445, 1821, 2205
BsoBI	CYCGRG	2 cut(s)	613, 2364
Bsp1286I	GDGCHC	2 cut(s)	1947, 2329
Bsp143I	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
Bsp19I	CCATGG	1 cut(s)	264
BspACI	CCGC	8 cut(s)	257, 513, 581, 584, 627, 647, 2320, 2323
BspANI	GGCC	6 cut(s)	263, 780, 1255, 1445, 1821, 2205
BspCNI	CTCAG	6 cut(s)	223, 1334, 1402, 1449, 1825, 2341
BspDI	ATCGAT	1 cut(s)	2002
BspMAI	CTGCAG	1 cut(s)	1210
BspMI	ACCTGC	2 cut(s)	1752, 2258
BspPI	GGATC	5 cut(s)	904, 1381, 1394, 2354, 2367
BspT107I	GGYRCC	3 cut(s)	335, 2246, 2570
BsrDI	GCAATG	4 cut(s)	519, 533, 1340, 2487
BsrFI	RCCGGY	2 cut(s)	259, 2517
BsrI	ACTGG	4 cut(s)	292, 1075, 1849, 2321
BssAI	RCCGGY	2 cut(s)	259, 2517
BssECI	CCNNGG	7 cut(s)	264, 613, 868, 1390, 1810, 1811, 2206
BssMI	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
BssNAI	GTATAC	1 cut(s)	1734
BssNI	GRCGYC	2 cut(s)	143, 2031
BssT1I	CCWWGG	1 cut(s)	264
Bst1107I	GTATAC	1 cut(s)	1734
Bst2UI	CCWGG	6 cut(s)	224, 1392, 1442, 1812, 2066, 2208
Bst4CI	ACNGT	4 cut(s)	67, 275, 869, 1927
Bst6I	CTCTTC	2 cut(s)	1021, 1315
BstACI	GRCGYC	2 cut(s)	143, 2031
BstAPI	GCANNNNNTGC	4 cut(s)	530, 1277, 2275, 2405
BstBAI	YACGTR	5 cut(s)	603, 1361, 1527, 1737, 2286
BstC8I	GCNNGC	8 cut(s)	261, 750, 1239, 1294, 2280, 2325, 2406, 2526
BstDEI	CTNAG	6 cut(s)	231, 1321, 1410, 1436, 1833, 2328
BstDSI	CCRYGG	2 cut(s)	264, 868
BstF5I	GGATG	6 cut(s)	131, 592, 1404, 1572, 1664, 2088
BstH2I	RGCGCY	1 cut(s)	2303
BstHHI	GCGC	1 cut(s)	2302
BstKTI	GATC	7 cut(s)	240, 468, 597, 912, 1096, 1389, 2362
BstMAI	GTCTC	2 cut(s)	661, 1458
BstMBI	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
BstMCI	CGRYCG	2 cut(s)	240, 2522
BstMWI	GCNNNNNNNGC	8 cut(s)	151, 530, 643, 1277, 1289, 1505, 2275, 2405
BstNI	CCWGG	6 cut(s)	224, 1392, 1442, 1812, 2066, 2208
BstNSI	RCATGY	3 cut(s)	834, 1487, 2408
BstSCI	CCNGG	8 cut(s)	222, 612, 613, 1390, 1440, 1810, 2064, 2206
BstSFI	CTRYAG	1 cut(s)	1206
BstSLI	GKGCMC	1 cut(s)	1947
BstSNI	TACGTA	2 cut(s)	603, 1737
BstV1I	GCAGC	6 cut(s)	163, 1168, 1267, 1495, 2229, 2253
BstX2I	RGATCY	4 cut(s)	594, 1093, 1386, 2359
BstXI	CCANNNNNNTGG	1 cut(s)	1251
BstYI	RGATCY	4 cut(s)	594, 1093, 1386, 2359
BstZ17I	GTATAC	1 cut(s)	1734
Bsu15I	ATCGAT	1 cut(s)	2002
BsuI	GTATCC	4 cut(s)	749, 912, 1764, 2338
BsuRI	GGCC	6 cut(s)	263, 780, 1255, 1445, 1821, 2205
BsuTUI	ATCGAT	1 cut(s)	2002
BtgI	CCRYGG	2 cut(s)	264, 868
BtsCI	GGATG	6 cut(s)	131, 592, 1404, 1572, 1664, 2088
BtsI	GCAGTG	1 cut(s)	1215
BtsIMutI	CAGTG	3 cut(s)	280, 1215, 1830
BveI	ACCTGC	2 cut(s)	1752, 2258
Cac8I	GCNNGC	8 cut(s)	261, 750, 1239, 1294, 2280, 2325, 2406, 2526
CaiI	CAGNNNCTG	2 cut(s)	109, 2266
CfoI	GCGC	1 cut(s)	2302
Cfr10I	RCCGGY	2 cut(s)	259, 2517
Cfr13I	GGNCC	5 cut(s)	1784, 1807, 1979, 2204, 2228
Cfr9I	CCCGGG	1 cut(s)	613
ClaI	ATCGAT	1 cut(s)	2002
CseI	GACGC	2 cut(s)	151, 721
CsiI	ACCWGGT	1 cut(s)	2064
Csp6I	GTAC	4 cut(s)	1259, 2023, 2247, 2353
CviQI	GTAC	4 cut(s)	1259, 2023, 2247, 2353
DdeI	CTNAG	6 cut(s)	231, 1321, 1410, 1436, 1833, 2328
DpnI	GATC	7 cut(s)	239, 467, 596, 911, 1095, 1388, 2361
DpnII	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
DraI	TTTAAA	2 cut(s)	367, 2442
EaeI	YGGCCR	2 cut(s)	261, 1443
Eam1104I	CTCTTC	2 cut(s)	1021, 1315
EarI	CTCTTC	2 cut(s)	1021, 1315
EciI	GGCGGA	1 cut(s)	599
Eco105I	TACGTA	2 cut(s)	603, 1737
Eco130I	CCWWGG	1 cut(s)	264
Eco147I	AGGCCT	1 cut(s)	780
Eco24I	GRGCYC	1 cut(s)	2329
Eco47I	GGWCC	4 cut(s)	1784, 1807, 1979, 2228
Eco57I	CTGAAG	3 cut(s)	193, 426, 2217
Eco72I	CACGTG	1 cut(s)	1361
Eco88I	CYCGRG	2 cut(s)	613, 2364
EcoO109I	RGGNCCY	2 cut(s)	1807, 2228
EcoRI	GAATTC	1 cut(s)	294
EcoRII	CCWGG	6 cut(s)	222, 1390, 1440, 1810, 2064, 2206
EcoT14I	CCWWGG	1 cut(s)	264
EcoT22I	ATGCAT	1 cut(s)	535
EcoT38I	GRGCYC	1 cut(s)	2329
ErhI	CCWWGG	1 cut(s)	264
FalI	AAGNNNNNCTT	2 cut(s)	872, 904
FaqI	GGGAC	4 cut(s)	1188, 1793, 1835, 1965
FauI	CCCGC	3 cut(s)	264, 506, 2316
FauNDI	CATATG	1 cut(s)	2419
FbaI	TGATCA	1 cut(s)	465
FblI	GTMKAC	2 cut(s)	243, 1733
Fnu4HI	GCNGC	9 cut(s)	152, 582, 647, 1182, 1281, 1509, 2218, 2267, 2321
FokI	GGATG	6 cut(s)	118, 599, 1391, 1559, 1671, 2075
FriOI	GRGCYC	1 cut(s)	2329
Fsp4HI	GCNGC	9 cut(s)	152, 582, 647, 1182, 1281, 1509, 2218, 2267, 2321
FspBI	CTAG	4 cut(s)	56, 123, 701, 1541
GlaI	GCGC	1 cut(s)	2301
GluI	GCNGC	9 cut(s)	152, 582, 647, 1182, 1281, 1509, 2218, 2267, 2321
GsaI	CCCAGC	4 cut(s)	480, 887, 1784, 2412
GsuI	CTGGAG	2 cut(s)	1866, 2229
HaeII	RGCGCY	1 cut(s)	2303
HaeIII	GGCC	6 cut(s)	263, 780, 1255, 1445, 1821, 2205
HapII	CCGG	4 cut(s)	260, 614, 2120, 2518
HgaI	GACGC	2 cut(s)	151, 721
HhaI	GCGC	1 cut(s)	2302
Hin1I	GRCGYC	2 cut(s)	143, 2031
Hin6I	GCGC	1 cut(s)	2300
HinP1I	GCGC	1 cut(s)	2300
HincII	GTYRAC	2 cut(s)	271, 1533
HindII	GTYRAC	2 cut(s)	271, 1533
HpaII	CCGG	4 cut(s)	260, 614, 2120, 2518
HphI	GGTGA	5 cut(s)	445, 518, 736, 2080, 2197
Hpy166II	GTNNAC	6 cut(s)	244, 271, 692, 1533, 1595, 1734
Hpy188III	TCNNGA	7 cut(s)	117, 381, 1015, 1194, 1366, 1463, 2092
Hpy8I	GTNNAC	6 cut(s)	244, 271, 692, 1533, 1595, 1734
Hpy99I	CGWCG	2 cut(s)	145, 737
HpyAV	CCTTC	9 cut(s)	123, 217, 272, 503, 770, 2099, 2117, 2241, 2503
HpyCH4III	ACNGT	4 cut(s)	67, 275, 869, 1927
HpyCH4IV	ACGT	7 cut(s)	30, 602, 1360, 1526, 1736, 2031, 2285
HpyF10VI	GCNNNNNNNGC	8 cut(s)	151, 530, 643, 1277, 1289, 1505, 2275, 2405
HpyF3I	CTNAG	6 cut(s)	231, 1321, 1410, 1436, 1833, 2328
HpySE526I	ACGT	7 cut(s)	30, 602, 1360, 1526, 1736, 2031, 2285
Hsp92I	GRCGYC	2 cut(s)	143, 2031
HspAI	GCGC	1 cut(s)	2300
KflI	GGGWCCC	1 cut(s)	1807
KpnI	GGTACC	1 cut(s)	2250
KroI	GCCGGC	1 cut(s)	259
KroNI	GCCGGC	1 cut(s)	261
Ksp22I	TGATCA	1 cut(s)	465
Kzo9I	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
LmnI	GCTCC	4 cut(s)	59, 218, 713, 1246
Lsp1109I	GCAGC	6 cut(s)	163, 1168, 1267, 1495, 2229, 2253
LweI	GCATC	2 cut(s)	140, 1926
MabI	ACCWGGT	1 cut(s)	2064
MaeI	CTAG	4 cut(s)	56, 123, 701, 1541
MaeII	ACGT	7 cut(s)	30, 602, 1360, 1526, 1736, 2031, 2285
MaeIII	GTNAC	7 cut(s)	226, 608, 629, 1372, 2190, 2256, 2429
MalI	GATC	7 cut(s)	239, 467, 596, 911, 1095, 1388, 2361
MboI	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
MboII	GAAGA	7 cut(s)	419, 1038, 1128, 1302, 1623, 1678, 1738
MfeI	CAATTG	1 cut(s)	1452
MflI	RGATCY	4 cut(s)	594, 1093, 1386, 2359
MhlI	GDGCHC	2 cut(s)	1947, 2329
MlsI	TGGCCA	1 cut(s)	1445
MluNI	TGGCCA	1 cut(s)	1445
MlyI	GAGTC	1 cut(s)	1857
MmeI	TCCRAC	1 cut(s)	1016
Mox20I	TGGCCA	1 cut(s)	1445
Mph1103I	ATGCAT	1 cut(s)	535
MroNI	GCCGGC	1 cut(s)	259
MroXI	GAANNNNTTC	1 cut(s)	1959
MscI	TGGCCA	1 cut(s)	1445
MseI	TTAA	7 cut(s)	18, 366, 1416, 1650, 1874, 2441, 2562
MslI	CAYNNNNRTG	6 cut(s)	50, 675, 810, 1488, 1633, 2093
Msp20I	TGGCCA	1 cut(s)	1445
MspA1I	CMGCKG	2 cut(s)	627, 649
MspI	CCGG	4 cut(s)	260, 614, 2120, 2518
MspR9I	CCNGG	8 cut(s)	224, 614, 615, 1392, 1442, 1812, 2066, 2208
MunI	CAATTG	1 cut(s)	1452
Mva1269I	GAATGC	2 cut(s)	345, 2401
MvaI	CCWGG	6 cut(s)	224, 1392, 1442, 1812, 2066, 2208
MwoI	GCNNNNNNNGC	8 cut(s)	151, 530, 643, 1277, 1289, 1505, 2275, 2405
NaeI	GCCGGC	1 cut(s)	261
NciI	CCSGG	2 cut(s)	614, 615
NcoI	CCATGG	1 cut(s)	264
NdeI	CATATG	1 cut(s)	2419
NdeII	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
NgoMIV	GCCGGC	1 cut(s)	259
NmuCI	GTSAC	3 cut(s)	2190, 2256, 2429
NsiI	ATGCAT	1 cut(s)	535
NspI	RCATGY	3 cut(s)	834, 1487, 2408
PaeI	GCATGC	1 cut(s)	2408
PaeR7I	CTCGAG	1 cut(s)	2364
PasI	CCCWGGG	1 cut(s)	1811
PceI	AGGCCT	1 cut(s)	780
PctI	GAATGC	2 cut(s)	345, 2401
PdiI	GCCGGC	1 cut(s)	261
PdmI	GAANNNNTTC	1 cut(s)	1959
PflMI	CCANNNNNTGG	2 cut(s)	883, 1793
PkrI	GCNGC	9 cut(s)	153, 583, 648, 1183, 1282, 1510, 2219, 2268, 2322
Ple19I	CGATCG	1 cut(s)	240
PleI	GAGTC	1 cut(s)	1856
PmaCI	CACGTG	1 cut(s)	1361
PmlI	CACGTG	1 cut(s)	1361
PpsI	GAGTC	1 cut(s)	1856
Ppu21I	YACGTR	5 cut(s)	603, 1361, 1527, 1737, 2286
PpuMI	RGGWCCY	2 cut(s)	1807, 2228
PshBI	ATTAAT	1 cut(s)	1416
PsiI	TTATAA	1 cut(s)	2468
Psp5II	RGGWCCY	2 cut(s)	1807, 2228
Psp6I	CCWGG	6 cut(s)	222, 1390, 1440, 1810, 2064, 2206
PspCI	CACGTG	1 cut(s)	1361
PspFI	CCCAGC	4 cut(s)	476, 883, 1780, 2408
PspGI	CCWGG	6 cut(s)	222, 1390, 1440, 1810, 2064, 2206
PspPI	GGNCC	5 cut(s)	1784, 1807, 1979, 2204, 2228
PspPPI	RGGWCCY	2 cut(s)	1807, 2228
PspXI	VCTCGAGB	1 cut(s)	2364
PsrI	GAACNNNNNNTAC	2 cut(s)	464, 496
PstI	CTGCAG	1 cut(s)	1210
PstNI	CAGNNNCTG	2 cut(s)	109, 2266
PsuI	RGATCY	4 cut(s)	594, 1093, 1386, 2359
PvuI	CGATCG	1 cut(s)	240
RsaI	GTAC	4 cut(s)	1260, 2024, 2248, 2354
RsaNI	GTAC	4 cut(s)	1259, 2023, 2247, 2353
RseI	CAYNNNNRTG	6 cut(s)	50, 675, 810, 1488, 1633, 2093
SaqAI	TTAA	7 cut(s)	18, 366, 1416, 1650, 1874, 2441, 2562
SatI	GCNGC	9 cut(s)	152, 582, 647, 1182, 1281, 1509, 2218, 2267, 2321
Sau3AI	GATC	7 cut(s)	237, 465, 594, 909, 1093, 1386, 2359
Sau96I	GGNCC	5 cut(s)	1784, 1807, 1979, 2204, 2228
SchI	GAGTC	1 cut(s)	1857
ScrFI	CCNGG	8 cut(s)	224, 614, 615, 1392, 1442, 1812, 2066, 2208
SduI	GDGCHC	2 cut(s)	1947, 2329
SexAI	ACCWGGT	1 cut(s)	2064
SfaNI	GCATC	2 cut(s)	140, 1926
SfcI	CTRYAG	1 cut(s)	1206
Sfr274I	CTCGAG	1 cut(s)	2364
SinI	GGWCC	4 cut(s)	1784, 1807, 1979, 2228
SlaI	CTCGAG	1 cut(s)	2364
SmaI	CCCGGG	1 cut(s)	615
SmiMI	CAYNNNNRTG	6 cut(s)	50, 675, 810, 1488, 1633, 2093
SmlI	CTYRAG	1 cut(s)	2364
SmoI	CTYRAG	1 cut(s)	2364
SnaBI	TACGTA	2 cut(s)	603, 1737
SpeI	ACTAGT	1 cut(s)	1540
SphI	GCATGC	1 cut(s)	2408
SseBI	AGGCCT	1 cut(s)	780
SsiI	CCGC	8 cut(s)	257, 513, 581, 584, 627, 647, 2320, 2323
SspMI	CTAG	4 cut(s)	56, 123, 701, 1541
StuI	AGGCCT	1 cut(s)	780
StyD4I	CCNGG	8 cut(s)	222, 612, 613, 1390, 1440, 1810, 2064, 2206
StyI	CCWWGG	1 cut(s)	264
TaaI	ACNGT	4 cut(s)	67, 275, 869, 1927
TaiI	ACGT	7 cut(s)	33, 605, 1363, 1529, 1739, 2034, 2288
TaqI	TCGA	5 cut(s)	156, 162, 1462, 2002, 2365
TatI	WGTACW	2 cut(s)	1258, 2352
TauI	GCSGC	3 cut(s)	584, 649, 2323
Tru1I	TTAA	7 cut(s)	18, 366, 1416, 1650, 1874, 2441, 2562
Tru9I	TTAA	7 cut(s)	18, 366, 1416, 1650, 1874, 2441, 2562
TscAI	CASTG	3 cut(s)	280, 1215, 1837
TseFI	GTSAC	3 cut(s)	2190, 2256, 2429
TseI	GCWGC	6 cut(s)	151, 1181, 1280, 1508, 2217, 2266
Tsp45I	GTSAC	3 cut(s)	2190, 2256, 2429
TspDTI	ATGAA	9 cut(s)	756, 880, 1561, 1617, 1623, 1655, 1778, 2077, 2448
TspGWI	ACGGA	4 cut(s)	89, 169, 1399, 2007
TspMI	CCCGGG	1 cut(s)	613
TspRI	CASTG	3 cut(s)	280, 1215, 1837
Van91I	CCANNNNNTGG	2 cut(s)	883, 1793
VpaK11BI	GGWCC	4 cut(s)	1784, 1807, 1979, 2228
VspI	ATTAAT	1 cut(s)	1416
XapI	RAATTY	3 cut(s)	218, 294, 785
XceI	RCATGY	3 cut(s)	834, 1487, 2408
XhoI	CTCGAG	1 cut(s)	2364
XmaI	CCCGGG	1 cut(s)	613
XmiI	GTMKAC	2 cut(s)	243, 1733
XmnI	GAANNNNTTC	1 cut(s)	1959
XspI	CTAG	4 cut(s)	56, 123, 701, 1541
ZraI	GACGTC	1 cut(s)	2032
Zsp2I	ATGCAT	1 cut(s)	535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.