Intracellular protein transport protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64320 AT1G64320 AT5G41780 AT5G41780 AT5G41780 AT5G41780 |
| fragaria_vesca | FvH4_5g04071 FvH4_5g04071 FvH4_5g04071 |
| malus_domestica | MD06G1102200.v1.1 MD14G1121400.v1.1 |
| prunus_persica | Prupe.5G115200_v2.0.a1 Prupe.5G115200_v2.0.a1 |
| pyrus_communis | pycom06g09700 |
| rosa_chinensis | RchiOBHm_Chr7g0195441 |
| rosa_roxburghii | Rroxscaffold_3G00260480 |
| rosa_rugosa | Rorug07G0023200 Rorug07G0023200 |
| rosa_samantha | Rh7BG152300 |
| rosa_wichuraiana | Rw7G012860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 699 |
| Acc36I | ACCTGC | 2 cut(s) | 766, 1198 |
| AccI | GTMKAC | 1 cut(s) | 300 |
| AccII | CGCG | 1 cut(s) | 541 |
| AciI | CCGC | 2 cut(s) | 1634, 2192 |
| AclWI | GGATC | 4 cut(s) | 202, 799, 1631, 1730 |
| AcoI | YGGCCR | 2 cut(s) | 1351, 2059 |
| AcuI | CTGAAG | 3 cut(s) | 227, 332, 519 |
| AfaI | GTAC | 6 cut(s) | 1539, 1580, 1616, 1688, 1780, 2105 |
| AfeI | AGCGCT | 1 cut(s) | 1292 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 393, 2134 |
| AflII | CTTAAG | 2 cut(s) | 173, 766 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 79, 111, 452, 484, 1244, 1276 |
| Alw21I | GWGCWC | 1 cut(s) | 629 |
| Alw26I | GTCTC | 2 cut(s) | 84, 1057 |
| AlwI | GGATC | 4 cut(s) | 202, 799, 1631, 1730 |
| Ama87I | CYCGRG | 1 cut(s) | 393 |
| Aor51HI | AGCGCT | 1 cut(s) | 1292 |
| AoxI | GGCC | 3 cut(s) | 1351, 2059, 2148 |
| ApeKI | GCWGC | 2 cut(s) | 266, 453 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 954 |
| AspLEI | GCGC | 4 cut(s) | 541, 700, 1293, 1608 |
| AsuHPI | GGTGA | 3 cut(s) | 212, 719, 2175 |
| AsuNHI | GCTAGC | 1 cut(s) | 1720 |
| AvaI | CYCGRG | 1 cut(s) | 393 |
| BalI | TGGCCA | 2 cut(s) | 1353, 2061 |
| BanII | GRGCYC | 1 cut(s) | 629 |
| BauI | CACGAG | 1 cut(s) | 1817 |
| BbsI | GAAGAC | 3 cut(s) | 123, 1073, 1602 |
| Bbv12I | GWGCWC | 1 cut(s) | 629 |
| BbvCI | CCTCAGC | 1 cut(s) | 388 |
| BbvI | GCAGC | 2 cut(s) | 278, 465 |
| BccI | CCATC | 5 cut(s) | 718, 877, 931, 1309, 1552 |
| BceAI | ACGGC | 1 cut(s) | 2171 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1163, 1197 |
| BclI | TGATCA | 1 cut(s) | 1438 |
| BcoDI | GTCTC | 2 cut(s) | 84, 1057 |
| BfaI | CTAG | 3 cut(s) | 512, 1089, 1721 |
| BfoI | RGCGCY | 1 cut(s) | 1294 |
| BfrI | CTTAAG | 2 cut(s) | 173, 766 |
| BfuAI | ACCTGC | 2 cut(s) | 766, 1198 |
| BglII | AGATCT | 1 cut(s) | 1705 |
| BisI | GCNGC | 3 cut(s) | 267, 454, 2192 |
| BlpI | GCTNAGC | 1 cut(s) | 628 |
| BlsI | GCNGC | 3 cut(s) | 268, 455, 2193 |
| BmeT110I | CYCGRG | 1 cut(s) | 393 |
| BmsI | GCATC | 3 cut(s) | 168, 880, 2018 |
| BmtI | GCTAGC | 1 cut(s) | 1724 |
| BoxI | GACNNNNGTC | 2 cut(s) | 755, 1208 |
| BpiI | GAAGAC | 3 cut(s) | 123, 1073, 1602 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 611, 643, 2022, 2054 |
| Bpu10I | CCTNAGC | 1 cut(s) | 388 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 628 |
| BpuEI | CTTGAG | 5 cut(s) | 575, 593, 1889, 2087, 2108 |
| Bsa29I | ATCGAT | 3 cut(s) | 12, 218, 2179 |
| BsaAI | YACGTR | 1 cut(s) | 1001 |
| BsaJI | CCNNGG | 1 cut(s) | 2128 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1856, 1886 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 393, 2134 |
| Bse1I | ACTGG | 2 cut(s) | 846, 1258 |
| Bse3DI | GCAATG | 1 cut(s) | 792 |
| BseCI | ATCGAT | 3 cut(s) | 12, 218, 2179 |
| BseDI | CCNNGG | 1 cut(s) | 2128 |
| BseGI | GGATG | 6 cut(s) | 322, 331, 586, 850, 1135, 2116 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 393, 2134 |
| BseMI | GCAATG | 1 cut(s) | 792 |
| BseMII | CTCAG | 9 cut(s) | 105, 126, 360, 402, 642, 1110, 1262, 1302, 1382 |
| BseNI | ACTGG | 2 cut(s) | 846, 1258 |
| BseRI | GAGGAG | 3 cut(s) | 635, 1877, 2150 |
| BseXI | GCAGC | 2 cut(s) | 278, 465 |
| BsgI | GTGCAG | 1 cut(s) | 794 |
| Bsh1236I | CGCG | 1 cut(s) | 541 |
| BshFI | GGCC | 3 cut(s) | 1353, 2061, 2150 |
| BshVI | ATCGAT | 3 cut(s) | 12, 218, 2179 |
| BsiHKAI | GWGCWC | 1 cut(s) | 629 |
| BsiHKCI | CYCGRG | 1 cut(s) | 393 |
| BslFI | GGGAC | 2 cut(s) | 426, 1836 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 393, 2134 |
| BsmAI | GTCTC | 2 cut(s) | 84, 1057 |
| BsmFI | GGGAC | 2 cut(s) | 426, 1836 |
| BsmI | GAATGC | 2 cut(s) | 1160, 1903 |
| BsnI | GGCC | 3 cut(s) | 1353, 2061, 2150 |
| BsoBI | CYCGRG | 1 cut(s) | 393 |
| Bsp1286I | GDGCHC | 1 cut(s) | 629 |
| Bsp1407I | TGTACA | 1 cut(s) | 1537 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 628 |
| BspACI | CCGC | 2 cut(s) | 1634, 2192 |
| BspANI | GGCC | 3 cut(s) | 1353, 2061, 2150 |
| BspCNI | CTCAG | 9 cut(s) | 104, 125, 359, 401, 641, 1111, 1261, 1303, 1383 |
| BspDI | ATCGAT | 3 cut(s) | 12, 218, 2179 |
| BspFNI | CGCG | 1 cut(s) | 541 |
| BspMI | ACCTGC | 2 cut(s) | 766, 1198 |
| BspOI | GCTAGC | 1 cut(s) | 1724 |
| BspPI | GGATC | 4 cut(s) | 202, 799, 1631, 1730 |
| BspQI | GCTCTTC | 2 cut(s) | 1149, 1959 |
| BspTI | CTTAAG | 2 cut(s) | 173, 766 |
| BsrDI | GCAATG | 1 cut(s) | 792 |
| BsrGI | TGTACA | 1 cut(s) | 1537 |
| BsrI | ACTGG | 2 cut(s) | 846, 1258 |
| BssECI | CCNNGG | 1 cut(s) | 2128 |
| BssSI | CACGAG | 1 cut(s) | 1817 |
| BssT1I | CCWWGG | 1 cut(s) | 2128 |
| Bst2BI | CACGAG | 1 cut(s) | 1817 |
| Bst4CI | ACNGT | 4 cut(s) | 417, 922, 1426, 1917 |
| Bst6I | CTCTTC | 3 cut(s) | 1149, 1959, 2135 |
| BstAFI | CTTAAG | 2 cut(s) | 173, 766 |
| BstAUI | TGTACA | 1 cut(s) | 1537 |
| BstBAI | YACGTR | 1 cut(s) | 1001 |
| BstC8I | GCNNGC | 6 cut(s) | 730, 1160, 1245, 1722, 1903, 2017 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2132 |
| BstF5I | GGATG | 6 cut(s) | 322, 331, 586, 850, 1135, 2116 |
| BstFNI | CGCG | 1 cut(s) | 541 |
| BstH2I | RGCGCY | 1 cut(s) | 1294 |
| BstHHI | GCGC | 4 cut(s) | 541, 700, 1293, 1608 |
| BstMAI | GTCTC | 2 cut(s) | 84, 1057 |
| BstNSI | RCATGY | 2 cut(s) | 539, 662 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 755, 1208 |
| BstSNI | TACGTA | 1 cut(s) | 1001 |
| BstUI | CGCG | 1 cut(s) | 541 |
| BstV1I | GCAGC | 2 cut(s) | 278, 465 |
| BstV2I | GAAGAC | 3 cut(s) | 123, 1073, 1602 |
| BstX2I | RGATCY | 4 cut(s) | 194, 804, 1705, 1735 |
| BstYI | RGATCY | 4 cut(s) | 194, 804, 1705, 1735 |
| Bsu15I | ATCGAT | 3 cut(s) | 12, 218, 2179 |
| BsuRI | GGCC | 3 cut(s) | 1353, 2061, 2150 |
| BsuTUI | ATCGAT | 3 cut(s) | 12, 218, 2179 |
| BtsCI | GGATG | 6 cut(s) | 322, 331, 586, 850, 1135, 2116 |
| BtsI | GCAGTG | 1 cut(s) | 1781 |
| BtsIMutI | CAGTG | 1 cut(s) | 1781 |
| BveI | ACCTGC | 2 cut(s) | 766, 1198 |
| Cac8I | GCNNGC | 6 cut(s) | 730, 1160, 1245, 1722, 1903, 2017 |
| CfoI | GCGC | 4 cut(s) | 541, 700, 1293, 1608 |
| ClaI | ATCGAT | 3 cut(s) | 12, 218, 2179 |
| CseI | GACGC | 3 cut(s) | 621, 760, 1213 |
| Csp6I | GTAC | 6 cut(s) | 1538, 1579, 1615, 1687, 1779, 2104 |
| CviQI | GTAC | 6 cut(s) | 1538, 1579, 1615, 1687, 1779, 2104 |
| DraI | TTTAAA | 2 cut(s) | 430, 567 |
| EaeI | YGGCCR | 2 cut(s) | 1351, 2059 |
| Eam1104I | CTCTTC | 3 cut(s) | 1149, 1959, 2135 |
| EarI | CTCTTC | 3 cut(s) | 1149, 1959, 2135 |
| Ecl136II | GAGCTC | 1 cut(s) | 627 |
| Eco105I | TACGTA | 1 cut(s) | 1001 |
| Eco130I | CCWWGG | 1 cut(s) | 2128 |
| Eco24I | GRGCYC | 1 cut(s) | 629 |
| Eco47III | AGCGCT | 1 cut(s) | 1292 |
| Eco53kI | GAGCTC | 1 cut(s) | 627 |
| Eco57I | CTGAAG | 3 cut(s) | 227, 332, 519 |
| Eco88I | CYCGRG | 1 cut(s) | 393 |
| EcoICRI | GAGCTC | 1 cut(s) | 627 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2132 |
| EcoRI | GAATTC | 2 cut(s) | 991, 1196 |
| EcoT14I | CCWWGG | 1 cut(s) | 2128 |
| EcoT38I | GRGCYC | 1 cut(s) | 629 |
| ErhI | CCWWGG | 1 cut(s) | 2128 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2027, 2059 |
| FaqI | GGGAC | 2 cut(s) | 426, 1836 |
| FbaI | TGATCA | 1 cut(s) | 1438 |
| FblI | GTMKAC | 1 cut(s) | 300 |
| Fnu4HI | GCNGC | 3 cut(s) | 267, 454, 2192 |
| FokI | GGATG | 6 cut(s) | 329, 338, 593, 857, 1142, 2123 |
| FriOI | GRGCYC | 1 cut(s) | 629 |
| Fsp4HI | GCNGC | 3 cut(s) | 267, 454, 2192 |
| FspBI | CTAG | 3 cut(s) | 512, 1089, 1721 |
| FspI | TGCGCA | 1 cut(s) | 699 |
| GlaI | GCGC | 4 cut(s) | 540, 699, 1292, 1607 |
| GluI | GCNGC | 3 cut(s) | 267, 454, 2192 |
| HaeII | RGCGCY | 1 cut(s) | 1294 |
| HaeIII | GGCC | 3 cut(s) | 1353, 2061, 2150 |
| HgaI | GACGC | 3 cut(s) | 621, 760, 1213 |
| HhaI | GCGC | 4 cut(s) | 541, 700, 1293, 1608 |
| Hin6I | GCGC | 4 cut(s) | 539, 698, 1291, 1606 |
| HinP1I | GCGC | 4 cut(s) | 539, 698, 1291, 1606 |
| HincII | GTYRAC | 1 cut(s) | 420 |
| HindII | GTYRAC | 1 cut(s) | 420 |
| HindIII | AAGCTT | 1 cut(s) | 1176 |
| HpaI | GTTAAC | 1 cut(s) | 420 |
| HphI | GGTGA | 3 cut(s) | 212, 719, 2175 |
| Hpy166II | GTNNAC | 3 cut(s) | 301, 420, 1781 |
| Hpy8I | GTNNAC | 3 cut(s) | 301, 420, 1781 |
| Hpy99I | CGWCG | 3 cut(s) | 637, 754, 1207 |
| HpyAV | CCTTC | 7 cut(s) | 119, 185, 307, 787, 1393, 1954, 2044 |
| HpyCH4III | ACNGT | 4 cut(s) | 417, 922, 1426, 1917 |
| HpyCH4IV | ACGT | 3 cut(s) | 120, 1000, 1727 |
| HpySE526I | ACGT | 3 cut(s) | 120, 1000, 1727 |
| HspAI | GCGC | 4 cut(s) | 539, 698, 1291, 1606 |
| Ksp22I | TGATCA | 1 cut(s) | 1438 |
| KspAI | GTTAAC | 1 cut(s) | 420 |
| LguI | GCTCTTC | 2 cut(s) | 1149, 1959 |
| LmnI | GCTCC | 2 cut(s) | 1492, 1864 |
| Lsp1109I | GCAGC | 2 cut(s) | 278, 465 |
| LweI | GCATC | 3 cut(s) | 168, 880, 2018 |
| MaeI | CTAG | 3 cut(s) | 512, 1089, 1721 |
| MaeII | ACGT | 3 cut(s) | 120, 1000, 1727 |
| MaeIII | GTNAC | 2 cut(s) | 128, 1001 |
| MflI | RGATCY | 4 cut(s) | 194, 804, 1705, 1735 |
| MhlI | GDGCHC | 1 cut(s) | 629 |
| MlsI | TGGCCA | 2 cut(s) | 1353, 2061 |
| MluNI | TGGCCA | 2 cut(s) | 1353, 2061 |
| MlyI | GAGTC | 4 cut(s) | 38, 1087, 1880, 2080 |
| MmeI | TCCRAC | 4 cut(s) | 420, 1083, 1242, 1983 |
| Mox20I | TGGCCA | 2 cut(s) | 1353, 2061 |
| MroXI | GAANNNNTTC | 1 cut(s) | 954 |
| MscI | TGGCCA | 2 cut(s) | 1353, 2061 |
| Msp20I | TGGCCA | 2 cut(s) | 1353, 2061 |
| MspCI | CTTAAG | 2 cut(s) | 173, 766 |
| Mva1269I | GAATGC | 2 cut(s) | 1160, 1903 |
| MvnI | CGCG | 1 cut(s) | 541 |
| NheI | GCTAGC | 1 cut(s) | 1720 |
| NsbI | TGCGCA | 1 cut(s) | 699 |
| NspI | RCATGY | 2 cut(s) | 539, 662 |
| PciSI | GCTCTTC | 2 cut(s) | 1149, 1959 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1769 |
| PctI | GAATGC | 2 cut(s) | 1160, 1903 |
| PdmI | GAANNNNTTC | 1 cut(s) | 954 |
| PkrI | GCNGC | 3 cut(s) | 268, 455, 2193 |
| PleI | GAGTC | 4 cut(s) | 37, 1086, 1879, 2079 |
| PpsI | GAGTC | 4 cut(s) | 37, 1086, 1879, 2079 |
| Ppu21I | YACGTR | 1 cut(s) | 1001 |
| PshAI | GACNNNNGTC | 2 cut(s) | 755, 1208 |
| Psp124BI | GAGCTC | 1 cut(s) | 629 |
| PsuI | RGATCY | 4 cut(s) | 194, 804, 1705, 1735 |
| RsaI | GTAC | 6 cut(s) | 1539, 1580, 1616, 1688, 1780, 2105 |
| RsaNI | GTAC | 6 cut(s) | 1538, 1579, 1615, 1687, 1779, 2104 |
| SacI | GAGCTC | 1 cut(s) | 629 |
| SapI | GCTCTTC | 2 cut(s) | 1149, 1959 |
| SatI | GCNGC | 3 cut(s) | 267, 454, 2192 |
| SchI | GAGTC | 4 cut(s) | 38, 1087, 1880, 2080 |
| SduI | GDGCHC | 1 cut(s) | 629 |
| SfaNI | GCATC | 3 cut(s) | 168, 880, 2018 |
| SmlI | CTYRAG | 7 cut(s) | 173, 554, 608, 766, 1868, 2066, 2087 |
| SmoI | CTYRAG | 7 cut(s) | 173, 554, 608, 766, 1868, 2066, 2087 |
| SnaBI | TACGTA | 1 cut(s) | 1001 |
| SsiI | CCGC | 2 cut(s) | 1634, 2192 |
| SspI | AATATT | 3 cut(s) | 104, 185, 260 |
| SspMI | CTAG | 3 cut(s) | 512, 1089, 1721 |
| SstI | GAGCTC | 1 cut(s) | 629 |
| StyI | CCWWGG | 1 cut(s) | 2128 |
| TaaI | ACNGT | 4 cut(s) | 417, 922, 1426, 1917 |
| TaiI | ACGT | 3 cut(s) | 123, 1003, 1730 |
| TaqI | TCGA | 6 cut(s) | 12, 218, 357, 635, 1186, 2179 |
| TatI | WGTACW | 3 cut(s) | 1537, 1778, 2103 |
| TauI | GCSGC | 1 cut(s) | 2194 |
| TscAI | CASTG | 1 cut(s) | 1788 |
| TseI | GCWGC | 2 cut(s) | 266, 453 |
| TspRI | CASTG | 1 cut(s) | 1788 |
| Vha464I | CTTAAG | 2 cut(s) | 173, 766 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2132 |
| XbaI | TCTAGA | 1 cut(s) | 1088 |
| XceI | RCATGY | 2 cut(s) | 539, 662 |
| XmiI | GTMKAC | 1 cut(s) | 300 |
| XmnI | GAANNNNTTC | 1 cut(s) | 954 |
| XspI | CTAG | 3 cut(s) | 512, 1089, 1721 |