pycom06g10650

Guanosine nucleotide diphosphate dissociation inhibitor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
15927436 .. 15927909
474 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g10650.2

Sequence Viewer

Length: 387 bp
ATGTATCTTTTATGTTGCTCCTACTCTCACAATGTTGCTCCAAAGGGAAAATTTATTGCATTTATATTAACAGACGCAGAGACTGATCATCCCGAGACTGAGCTAAAGCCAAGGATTGACCTTTTAGGGCCTATTGACGAGATATTTTTTAAGACTTATGACAGATATGAGCCTGATAATGAACCCACTTTGGACAATTGCTTTATATCAACCAGTTATGATGCCTCCACACACTTTGAGTGCACTGTCTTAGATGTACTCAACATGTACACCTTAATAACAGGGAAGTTAAGAAATAAAATTTTATGCATTGCCCAATTAGTTTGGTTCTGTTGTTTTCGATTTCATGTCATCCTTGAAGTCAATGGATATTTCTTGATTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

129

Amino Acids

14.89

Weight (kDa)

4.89

Isoelectric Point (pI)

29.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020392)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 50, 300
AfaI GTAC 2 cut(s) 258, 269
AflIII ACRYGT 1 cut(s) 264
AgsI TTSAA 1 cut(s) 359
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
Alw21I GWGCWC 1 cut(s) 245
Alw26I GTCTC 2 cut(s) 74, 89
Alw44I GTGCAC 1 cut(s) 241
AlwNI CAGNNNCTG 1 cut(s) 83
Ama87I CYCGRG 1 cut(s) 92
AoxI GGCC 1 cut(s) 128
ApaLI GTGCAC 1 cut(s) 241
ApoI RAATTY 2 cut(s) 50, 300
AspS9I GGNCC 1 cut(s) 128
AvaI CYCGRG 1 cut(s) 92
BaeGI GKGCMC 1 cut(s) 245
Bbv12I GWGCWC 1 cut(s) 245
BclI TGATCA 1 cut(s) 85
BcoDI GTCTC 2 cut(s) 74, 89
BmeT110I CYCGRG 1 cut(s) 92
BmgT120I GGNCC 1 cut(s) 128
BmsI GCATC 1 cut(s) 211
BsaJI CCNNGG 1 cut(s) 110
Bse1I ACTGG 1 cut(s) 213
Bse3DI GCAATG 1 cut(s) 309
BseDI CCNNGG 1 cut(s) 110
BseGI GGATG 2 cut(s) 88, 351
BseMI GCAATG 1 cut(s) 309
BseMII CTCAG 1 cut(s) 90
BseNI ACTGG 1 cut(s) 213
BseSI GKGCMC 1 cut(s) 245
BshFI GGCC 1 cut(s) 130
BsiHKAI GWGCWC 1 cut(s) 245
BsiHKCI CYCGRG 1 cut(s) 92
BsmAI GTCTC 2 cut(s) 74, 89
BsnI GGCC 1 cut(s) 130
BsoBI CYCGRG 1 cut(s) 92
Bsp1286I GDGCHC 1 cut(s) 245
Bsp1407I TGTACA 1 cut(s) 267
Bsp143I GATC 1 cut(s) 85
BspANI GGCC 1 cut(s) 130
BspCNI CTCAG 1 cut(s) 91
BsrDI GCAATG 1 cut(s) 309
BsrGI TGTACA 1 cut(s) 267
BsrI ACTGG 1 cut(s) 213
BssECI CCNNGG 1 cut(s) 110
BssMI GATC 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 110
Bst4CI ACNGT 1 cut(s) 247
BstAUI TGTACA 1 cut(s) 267
BstDEI CTNAG 2 cut(s) 99, 250
BstF5I GGATG 2 cut(s) 88, 351
BstKTI GATC 1 cut(s) 88
BstMAI GTCTC 2 cut(s) 74, 89
BstMBI GATC 1 cut(s) 85
BstNSI RCATGY 1 cut(s) 268
BstSLI GKGCMC 1 cut(s) 245
BsuRI GGCC 1 cut(s) 130
BtsCI GGATG 2 cut(s) 88, 351
BtsIMutI CAGTG 1 cut(s) 243
CaiI CAGNNNCTG 1 cut(s) 83
Cfr13I GGNCC 1 cut(s) 128
CseI GACGC 1 cut(s) 83
Csp6I GTAC 2 cut(s) 257, 268
CspCI CAANNNNNGTGG 2 cut(s) 217, 252
CviAII CATG 2 cut(s) 265, 347
CviJI RGCY 4 cut(s) 103, 109, 130, 172
CviKI_1 RGCY 4 cut(s) 103, 109, 130, 172
CviQI GTAC 2 cut(s) 257, 268
DdeI CTNAG 2 cut(s) 99, 250
DpnI GATC 1 cut(s) 87
DpnII GATC 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 92
EcoO109I RGGNCCY 1 cut(s) 128
EcoT14I CCWWGG 1 cut(s) 110
EcoT22I ATGCAT 1 cut(s) 311
ErhI CCWWGG 1 cut(s) 110
FaeI CATG 2 cut(s) 268, 350
FaiI YATR 9 cut(s) 13, 65, 159, 168, 206, 219, 266, 307, 348
FatI CATG 2 cut(s) 264, 346
FbaI TGATCA 1 cut(s) 85
FokI GGATG 2 cut(s) 75, 338
HaeIII GGCC 1 cut(s) 130
HgaI GACGC 1 cut(s) 83
Hin1II CATG 2 cut(s) 268, 350
Hpy166II GTNNAC 2 cut(s) 243, 270
Hpy188III TCNNGA 2 cut(s) 92, 376
Hpy8I GTNNAC 2 cut(s) 243, 270
HpyCH4III ACNGT 1 cut(s) 247
HpyCH4V TGCA 3 cut(s) 59, 243, 309
HpyF3I CTNAG 2 cut(s) 99, 250
Hsp92II CATG 2 cut(s) 268, 350
Ksp22I TGATCA 1 cut(s) 85
Kzo9I GATC 1 cut(s) 85
LmnI GCTCC 2 cut(s) 23, 43
LpnPI CCDG 3 cut(s) 186, 226, 267
LweI GCATC 1 cut(s) 211
MalI GATC 1 cut(s) 87
MboI GATC 1 cut(s) 85
MfeI CAATTG 1 cut(s) 196
MhlI GDGCHC 1 cut(s) 245
MluCI AATT 4 cut(s) 50, 196, 300, 317
MnlI CCTC 1 cut(s) 235
Mph1103I ATGCAT 1 cut(s) 311
MseI TTAA 5 cut(s) 68, 150, 275, 290, 381
MunI CAATTG 1 cut(s) 196
NdeII GATC 1 cut(s) 85
NlaIII CATG 2 cut(s) 268, 350
NsiI ATGCAT 1 cut(s) 311
NspI RCATGY 1 cut(s) 268
PciI ACATGT 1 cut(s) 264
PscI ACATGT 1 cut(s) 264
PspPI GGNCC 1 cut(s) 128
PstNI CAGNNNCTG 1 cut(s) 83
RsaI GTAC 2 cut(s) 258, 269
RsaNI GTAC 2 cut(s) 257, 268
SaqAI TTAA 5 cut(s) 68, 150, 275, 290, 381
Sau3AI GATC 1 cut(s) 85
Sau96I GGNCC 1 cut(s) 128
SduI GDGCHC 1 cut(s) 245
SetI ASST 3 cut(s) 105, 123, 275
SfaNI GCATC 1 cut(s) 211
Sse9I AATT 4 cut(s) 50, 196, 300, 317
StyI CCWWGG 1 cut(s) 110
TaaI ACNGT 1 cut(s) 247
TaqI TCGA 1 cut(s) 340
TasI AATT 4 cut(s) 50, 196, 300, 317
TatI WGTACW 2 cut(s) 256, 267
Tru1I TTAA 5 cut(s) 68, 150, 275, 290, 381
Tru9I TTAA 5 cut(s) 68, 150, 275, 290, 381
TscAI CASTG 1 cut(s) 250
TspDTI ATGAA 2 cut(s) 195, 335
TspRI CASTG 1 cut(s) 250
VneI GTGCAC 1 cut(s) 241
XapI RAATTY 2 cut(s) 50, 300
XceI RCATGY 1 cut(s) 268
Zsp2I ATGCAT 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.