pycom06g15870

Nucleobase-ascorbate transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
20345260 .. 20349438
4179 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g15870.7

Sequence Viewer

Length: 1569 bp
ATGGCAGGCGGAGGCGGAGGCGGCGGCGGAGCTACAAAAGTGGATGAGCCACAACCACATCCACCAAAAGAACAGCTACCCAACATTTCTTACTGCATTACAAGTCCACCTCCATGGCCCGATGCCATTCTCCTTGGGTTTCAACACTACCTTGTGATGCTTGGAACTTCAGTTCTCATCCCCAGTGCTCTTGTTCCCCAGATGGGAGGAGGAAATGAAGAGAAGGCCAAGGTGATCCAGACCCTACTTTTTGTTGCTGGTTTGAACACATTGAAACAGACTTTGTTTGGGACTAGACTACCAGCAGTGATTGGAGGGTCGTATACGTTTGTCCCGACCACAATTTCCATCATATTAGCTGGTCGATTCAGTGATAATCAAGACCCTATAGAGAAATTTAAGAGGACAATGCGGGCAATCCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAGATAGTCTTAGGCTTCAGTGGCCTTTGGCGTAATGTTGTAAGGTTTTTAAGCCCACTTTCAGTTGTTCCTTTGGTAGCAATGGTTGGTTTTGGACTCTACGAGTTAGGTTTTCCAGTGCTTGCCAAATGTGTGGAGATTGGACTGCCAGAACTTGTCATTGTAGTATTTATTTCTCAGTATATGCCCCACATAATTCACAGAGGAAAACCTATATTTGATCGTTTCGCTGTCATATTTTCCGTGGTGATTGTGTGGATATATGCTCACCTACTCACTGTTGGTGGAGCATACGATGGTACTGGCCCAAAAACACAGGCAAGCTGCCGTACTGATCGTGCTGGACTTATAAATGCTGCTCCGTGGATTAGAGTTCCATATCCCTTCCAATGGGGAGCACCTTCCTTTGATGCTGGTGAAGCCTTTGCTATGATGGCAGCGACTTTAGTTGCACTTGTTGAGTCCACTGGTGCCTTCATTGCTGTGTCAAGATTTGCTAGTGCAACTCCAGTGCCACCCGCTATTCTGAGTCGTGGAGTTGGTTGGCAGGGAGTTGGCATTCTGGTTTCGGGCTTGTTTGGAACTGTGACCGGATCTTCAGTATCTGTTCGAAGGGTTGTGCAAATATCTGCTGGTTTCATGATATTTTTCTCCATTCTGGGCAAATTTGGAGCACTCTTCGCGTCGATTCCAGGGCCAATCTTCGCTGCTTTGTACTGTCTGTTCTTTGCGTATGTTGGTGCCGGAGGTCTTAGCTTTCTTCAGTTCTGCAACCTGAACACCTTCCGAACAAAGTTCATATTAGGTTTCTCTATCTTCATTGGCTTGTCCGTGCCACAGTACTTCAATGAGTACACCGCCATCAACGGTTACGGTCCAGTCCACACAGGAGGAAGATGGTTCAATGATATGATCAATGTCCCTCTACAATCAGAAGCTTTTGTCGCGGGCTGTGTCGCATATTTCTTGGACAACACGCTGCAACGAAAGGATAGTTCAGTTAAGAAAGACCGAGGTAAAACGTGGTGGAACAAGTTCCGGTCCTTCAAGGGGGATTCAAGGAGTGAGGAGTTTTATTCGCTGCCATTCAATCTAAACAAGTACTTCCCATCCGTATGA

Protein Analysis

523

Amino Acids

56.47

Weight (kDa)

9.44

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 800
AccB1I GGYRCC 2 cut(s) 920, 1190
AccI GTMKAC 1 cut(s) 323
AccII CGCG 2 cut(s) 1133, 1397
AciI CCGC 9 cut(s) 9, 15, 21, 24, 27, 412, 969, 1308, 1397
AclWI GGATC 2 cut(s) 229, 1051
AcsI RAATTY 2 cut(s) 395, 1115
AcuI CTGAAG 5 cut(s) 153, 434, 451, 1032, 1196
AfaI GTAC 6 cut(s) 751, 781, 1166, 1292, 1304, 1553
AfiI CCNNNNNNNGG 3 cut(s) 203, 840, 1500
AgsI TTSAA 9 cut(s) 143, 265, 274, 444, 1297, 1354, 1498, 1509, 1540
AjnI CCWGG 2 cut(s) 420, 1141
AloI GAACNNNNNNTCC 2 cut(s) 156, 188
AluBI AGCT 6 cut(s) 32, 76, 359, 774, 1206, 1388
AluI AGCT 6 cut(s) 32, 76, 359, 774, 1206, 1388
Alw21I GWGCWC 4 cut(s) 190, 430, 850, 1126
AlwI GGATC 2 cut(s) 229, 1051
AlwNI CAGNNNCTG 1 cut(s) 1055
AoxI GGCC 5 cut(s) 116, 225, 472, 754, 1145
ApeKI GCWGC 6 cut(s) 774, 806, 887, 1157, 1429, 1531
ApoI RAATTY 2 cut(s) 395, 1115
Asp700I GAANNNNTTC 2 cut(s) 1232, 1484
AspS9I GGNCC 5 cut(s) 117, 755, 1145, 1325, 1491
AsuHPI GGTGA 4 cut(s) 244, 709, 710, 878
AsuII TTCGAA 1 cut(s) 1060
AvaII GGWCC 2 cut(s) 1325, 1491
BanI GGYRCC 2 cut(s) 920, 1190
Bbv12I GWGCWC 4 cut(s) 190, 430, 850, 1126
BbvI GCAGC 6 cut(s) 761, 793, 899, 1144, 1416, 1518
BccI CCATC 7 cut(s) 196, 356, 740, 877, 1319, 1341, 1567
BceAI ACGGC 1 cut(s) 762
BciT130I CCWGG 2 cut(s) 422, 1143
BclI TGATCA 1 cut(s) 1362
BfaI CTAG 2 cut(s) 294, 948
BfmI CTRYAG 1 cut(s) 387
BisI GCNGC 8 cut(s) 22, 25, 775, 807, 888, 1158, 1430, 1532
BlsI GCNGC 8 cut(s) 23, 26, 776, 808, 889, 1159, 1431, 1533
BmcAI AGTACT 2 cut(s) 1292, 1553
Bme1390I CCNGG 2 cut(s) 422, 1143
Bme18I GGWCC 2 cut(s) 1325, 1491
BmgT120I GGNCC 5 cut(s) 117, 755, 1145, 1325, 1491
BmiI GGNNCC 2 cut(s) 922, 1192
BmrFI CCNGG 2 cut(s) 422, 1143
BmrI ACTGGG 1 cut(s) 177
BmsI GCATC 3 cut(s) 112, 147, 850
BmuI ACTGGG 1 cut(s) 177
BpmI CTGGAG 1 cut(s) 942
Bpu14I TTCGAA 1 cut(s) 1060
BsaJI CCNNGG 8 cut(s) 113, 133, 228, 421, 693, 812, 1142, 1462
BsaWI WCCGGW 2 cut(s) 1040, 1488
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 840, 1500
Bse1I ACTGG 6 cut(s) 183, 566, 757, 922, 959, 1328
Bse3DI GCAATG 2 cut(s) 537, 927
BseBI CCWGG 2 cut(s) 422, 1143
BseDI CCNNGG 8 cut(s) 113, 133, 228, 421, 693, 812, 1142, 1462
BseGI GGATG 4 cut(s) 49, 58, 177, 1559
BseLI CCNNNNNNNGG 3 cut(s) 203, 840, 1500
BseMI GCAATG 2 cut(s) 537, 927
BseMII CTCAG 2 cut(s) 641, 968
BseNI ACTGG 6 cut(s) 183, 566, 757, 922, 959, 1328
BseRI GAGGAG 2 cut(s) 222, 1532
BseXI GCAGC 6 cut(s) 761, 793, 899, 1144, 1416, 1518
Bsh1236I CGCG 2 cut(s) 1133, 1397
BshFI GGCC 5 cut(s) 118, 227, 474, 756, 1147
BshNI GGYRCC 2 cut(s) 920, 1190
BsiHKAI GWGCWC 4 cut(s) 190, 430, 850, 1126
BsiSI CCGG 3 cut(s) 1041, 1194, 1489
BslFI GGGAC 3 cut(s) 304, 317, 1355
BslI CCNNNNNNNGG 3 cut(s) 203, 840, 1500
BsmFI GGGAC 3 cut(s) 304, 317, 1355
BsmI GAATGC 1 cut(s) 1008
BsnI GGCC 5 cut(s) 118, 227, 474, 756, 1147
Bsp119I TTCGAA 1 cut(s) 1060
Bsp1286I GDGCHC 4 cut(s) 190, 430, 850, 1126
Bsp143I GATC 5 cut(s) 234, 670, 784, 1043, 1362
Bsp19I CCATGG 1 cut(s) 113
BspACI CCGC 9 cut(s) 9, 15, 21, 24, 27, 412, 969, 1308, 1397
BspANI GGCC 5 cut(s) 118, 227, 474, 756, 1147
BspCNI CTCAG 2 cut(s) 640, 969
BspFNI CGCG 2 cut(s) 1133, 1397
BspHI TCATGA 1 cut(s) 1089
BspLI GGNNCC 2 cut(s) 922, 1192
BspPI GGATC 2 cut(s) 229, 1051
BspT104I TTCGAA 1 cut(s) 1060
BspT107I GGYRCC 2 cut(s) 920, 1190
BsrDI GCAATG 2 cut(s) 537, 927
BsrI ACTGG 6 cut(s) 183, 566, 757, 922, 959, 1328
BssECI CCNNGG 8 cut(s) 113, 133, 228, 421, 693, 812, 1142, 1462
BssMI GATC 5 cut(s) 234, 670, 784, 1043, 1362
BssNAI GTATAC 1 cut(s) 324
BssT1I CCWWGG 3 cut(s) 113, 133, 228
Bst1107I GTATAC 1 cut(s) 324
Bst2UI CCWGG 2 cut(s) 422, 1143
Bst4CI ACNGT 6 cut(s) 730, 1036, 1169, 1290, 1319, 1325
Bst6I CTCTTC 3 cut(s) 213, 453, 1133
BstBI TTCGAA 1 cut(s) 1060
BstC8I GCNNGC 5 cut(s) 7, 414, 573, 772, 1399
BstDEI CTNAG 4 cut(s) 460, 627, 977, 1202
BstDSI CCRYGG 3 cut(s) 113, 693, 812
BstF5I GGATG 4 cut(s) 49, 58, 177, 1559
BstFNI CGCG 2 cut(s) 1133, 1397
BstKTI GATC 5 cut(s) 237, 673, 787, 1046, 1365
BstMBI GATC 5 cut(s) 234, 670, 784, 1043, 1362
BstMWI GCNNNNNNNGC 7 cut(s) 21, 471, 869, 884, 929, 1130, 1394
BstNI CCWGG 2 cut(s) 422, 1143
BstSCI CCNGG 2 cut(s) 420, 1141
BstSFI CTRYAG 1 cut(s) 387
BstUI CGCG 2 cut(s) 1133, 1397
BstV1I GCAGC 6 cut(s) 761, 793, 899, 1144, 1416, 1518
BstX2I RGATCY 1 cut(s) 1043
BstXI CCANNNNNNTGG 2 cut(s) 114, 583
BstYI RGATCY 1 cut(s) 1043
BstZ17I GTATAC 1 cut(s) 324
BsuRI GGCC 5 cut(s) 118, 227, 474, 756, 1147
BtgI CCRYGG 3 cut(s) 113, 693, 812
BtsCI GGATG 4 cut(s) 49, 58, 177, 1559
BtsI GCAGTG 1 cut(s) 312
BtsIMutI CAGTG 8 cut(s) 190, 312, 376, 475, 573, 726, 915, 966
Cac8I GCNNGC 5 cut(s) 7, 414, 573, 772, 1399
CaiI CAGNNNCTG 1 cut(s) 1055
CciI TCATGA 1 cut(s) 1089
Cfr13I GGNCC 5 cut(s) 117, 755, 1145, 1325, 1491
CseI GACGC 1 cut(s) 1122
Csp6I GTAC 6 cut(s) 750, 780, 1165, 1291, 1303, 1552
CviAII CATG 2 cut(s) 114, 1090
CviQI GTAC 6 cut(s) 750, 780, 1165, 1291, 1303, 1552
DdeI CTNAG 4 cut(s) 460, 627, 977, 1202
DpnI GATC 5 cut(s) 236, 672, 786, 1045, 1364
DpnII GATC 5 cut(s) 234, 670, 784, 1043, 1362
Eam1104I CTCTTC 3 cut(s) 213, 453, 1133
EarI CTCTTC 3 cut(s) 213, 453, 1133
EciI GGCGGA 3 cut(s) 24, 30, 42
Eco130I CCWWGG 3 cut(s) 113, 133, 228
Eco47I GGWCC 2 cut(s) 1325, 1491
Eco57I CTGAAG 5 cut(s) 153, 434, 451, 1032, 1196
EcoRII CCWGG 2 cut(s) 420, 1141
EcoT14I CCWWGG 3 cut(s) 113, 133, 228
ErhI CCWWGG 3 cut(s) 113, 133, 228
FaeI CATG 2 cut(s) 117, 1093
FaqI GGGAC 3 cut(s) 304, 317, 1355
FatI CATG 2 cut(s) 113, 1089
FauI CCCGC 3 cut(s) 405, 976, 1390
FbaI TGATCA 1 cut(s) 1362
FblI GTMKAC 1 cut(s) 323
Fnu4HI GCNGC 8 cut(s) 22, 25, 775, 807, 888, 1158, 1430, 1532
FokI GGATG 4 cut(s) 45, 56, 164, 1546
Fsp4HI GCNGC 8 cut(s) 22, 25, 775, 807, 888, 1158, 1430, 1532
FspBI CTAG 2 cut(s) 294, 948
GluI GCNGC 8 cut(s) 22, 25, 775, 807, 888, 1158, 1430, 1532
GsuI CTGGAG 1 cut(s) 942
HaeIII GGCC 5 cut(s) 118, 227, 474, 756, 1147
HapII CCGG 3 cut(s) 1041, 1194, 1489
HgaI GACGC 1 cut(s) 1122
Hin1II CATG 2 cut(s) 117, 1093
HindIII AAGCTT 1 cut(s) 1386
HinfI GANTC 6 cut(s) 366, 546, 911, 979, 1138, 1505
HpaII CCGG 3 cut(s) 1041, 1194, 1489
HphI GGTGA 4 cut(s) 244, 709, 710, 878
Hpy166II GTNNAC 5 cut(s) 107, 324, 915, 1305, 1333
Hpy188I TCNGA 4 cut(s) 453, 978, 1238, 1384
Hpy188III TCNNGA 5 cut(s) 238, 334, 380, 939, 1090
Hpy8I GTNNAC 5 cut(s) 107, 324, 915, 1305, 1333
Hpy99I CGWCG 1 cut(s) 1138
HpyAV CCTTC 7 cut(s) 217, 844, 861, 934, 1056, 1243, 1504
HpyCH4III ACNGT 6 cut(s) 730, 1036, 1169, 1290, 1319, 1325
HpyCH4IV ACGT 2 cut(s) 326, 1472
HpyCH4V TGCA 6 cut(s) 96, 902, 953, 1072, 1221, 1432
HpyF10VI GCNNNNNNNGC 7 cut(s) 21, 471, 869, 884, 929, 1130, 1394
HpyF3I CTNAG 4 cut(s) 460, 627, 977, 1202
HpySE526I ACGT 2 cut(s) 326, 1472
Hsp92II CATG 2 cut(s) 117, 1093
Ksp22I TGATCA 1 cut(s) 1362
Kzo9I GATC 5 cut(s) 234, 670, 784, 1043, 1362
LmnI GCTCC 5 cut(s) 29, 737, 814, 845, 1121
Lsp1109I GCAGC 6 cut(s) 761, 793, 899, 1144, 1416, 1518
LweI GCATC 3 cut(s) 112, 147, 850
MaeI CTAG 2 cut(s) 294, 948
MaeII ACGT 2 cut(s) 326, 1472
MaeIII GTNAC 2 cut(s) 1036, 1319
MalI GATC 5 cut(s) 236, 672, 786, 1045, 1364
MboI GATC 5 cut(s) 234, 670, 784, 1043, 1362
MboII GAAGA 8 cut(s) 230, 440, 1038, 1120, 1144, 1202, 1258, 1356
MflI RGATCY 1 cut(s) 1043
MhlI GDGCHC 4 cut(s) 190, 430, 850, 1126
MluCI AATT 4 cut(s) 342, 395, 645, 1115
MlyI GAGTC 3 cut(s) 540, 920, 988
MroXI GAANNNNTTC 2 cut(s) 1232, 1484
MseI TTAA 3 cut(s) 399, 500, 1452
MslI CAYNNNNRTG 3 cut(s) 112, 932, 1564
MspI CCGG 3 cut(s) 1041, 1194, 1489
MspR9I CCNGG 2 cut(s) 422, 1143
Mva1269I GAATGC 1 cut(s) 1008
MvaI CCWGG 2 cut(s) 422, 1143
MvnI CGCG 2 cut(s) 1133, 1397
MwoI GCNNNNNNNGC 7 cut(s) 21, 471, 869, 884, 929, 1130, 1394
NcoI CCATGG 1 cut(s) 113
NdeII GATC 5 cut(s) 234, 670, 784, 1043, 1362
NlaIII CATG 2 cut(s) 117, 1093
NlaIV GGNNCC 2 cut(s) 922, 1192
NmuCI GTSAC 1 cut(s) 1036
NspV TTCGAA 1 cut(s) 1060
PagI TCATGA 1 cut(s) 1089
PcsI WCGNNNNNNNCGW 1 cut(s) 332
PctI GAATGC 1 cut(s) 1008
PdmI GAANNNNTTC 2 cut(s) 1232, 1484
PfeI GAWTC 3 cut(s) 366, 1138, 1505
PkrI GCNGC 8 cut(s) 23, 26, 776, 808, 889, 1159, 1431, 1533
PleI GAGTC 3 cut(s) 540, 919, 987
PpsI GAGTC 3 cut(s) 540, 919, 987
PsiI TTATAA 1 cut(s) 800
Psp6I CCWGG 2 cut(s) 420, 1141
PspGI CCWGG 2 cut(s) 420, 1141
PspN4I GGNNCC 2 cut(s) 922, 1192
PspPI GGNCC 5 cut(s) 117, 755, 1145, 1325, 1491
PsrI GAACNNNNNNTAC 2 cut(s) 1157, 1189
PstNI CAGNNNCTG 1 cut(s) 1055
PsuI RGATCY 1 cut(s) 1043
RsaI GTAC 6 cut(s) 751, 781, 1166, 1292, 1304, 1553
RsaNI GTAC 6 cut(s) 750, 780, 1165, 1291, 1303, 1552
RseI CAYNNNNRTG 3 cut(s) 112, 932, 1564
SaqAI TTAA 3 cut(s) 399, 500, 1452
SatI GCNGC 8 cut(s) 22, 25, 775, 807, 888, 1158, 1430, 1532
Sau3AI GATC 5 cut(s) 234, 670, 784, 1043, 1362
Sau96I GGNCC 5 cut(s) 117, 755, 1145, 1325, 1491
ScaI AGTACT 2 cut(s) 1292, 1553
SchI GAGTC 3 cut(s) 540, 920, 988
ScrFI CCNGG 2 cut(s) 422, 1143
SduI GDGCHC 4 cut(s) 190, 430, 850, 1126
SfaNI GCATC 3 cut(s) 112, 147, 850
SfcI CTRYAG 1 cut(s) 387
SfuI TTCGAA 1 cut(s) 1060
SinI GGWCC 2 cut(s) 1325, 1491
SmiMI CAYNNNNRTG 3 cut(s) 112, 932, 1564
Sse9I AATT 4 cut(s) 342, 395, 645, 1115
SsiI CCGC 9 cut(s) 9, 15, 21, 24, 27, 412, 969, 1308, 1397
SspMI CTAG 2 cut(s) 294, 948
StyD4I CCNGG 2 cut(s) 420, 1141
StyI CCWWGG 3 cut(s) 113, 133, 228
TaaI ACNGT 6 cut(s) 730, 1036, 1169, 1290, 1319, 1325
TaiI ACGT 2 cut(s) 329, 1475
TaqI TCGA 3 cut(s) 364, 1060, 1136
TaqII GACCGA 1 cut(s) 1476
TasI AATT 4 cut(s) 342, 395, 645, 1115
TatI WGTACW 4 cut(s) 1164, 1290, 1302, 1551
TauI GCSGC 2 cut(s) 24, 27
TfiI GAWTC 3 cut(s) 366, 1138, 1505
Tru1I TTAA 3 cut(s) 399, 500, 1452
Tru9I TTAA 3 cut(s) 399, 500, 1452
TscAI CASTG 8 cut(s) 190, 312, 376, 475, 573, 733, 922, 966
TseFI GTSAC 1 cut(s) 1036
TseI GCWGC 6 cut(s) 774, 806, 887, 1157, 1429, 1531
Tsp45I GTSAC 1 cut(s) 1036
TspDTI ATGAA 5 cut(s) 231, 916, 1078, 1237, 1258
TspGWI ACGGA 4 cut(s) 682, 801, 1270, 1552
TspRI CASTG 8 cut(s) 190, 312, 376, 475, 573, 733, 922, 966
VpaK11BI GGWCC 2 cut(s) 1325, 1491
XapI RAATTY 2 cut(s) 395, 1115
XmiI GTMKAC 1 cut(s) 323
XmnI GAANNNNTTC 2 cut(s) 1232, 1484
XspI CTAG 2 cut(s) 294, 948
ZrmI AGTACT 2 cut(s) 1292, 1553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.