pycom08g07300

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
5890046 .. 5890345
300 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g07300.1

Sequence Viewer

Length: 300 bp
ATGCCGGTTCTGAAGCATTTGGGAGTAACGGGGCTTGAGAAGAAGTTGGTGTTATTGCAAAAGAAGAAGGATGAGTTCATGCAAAATTTGATTGAAGAACATAGAAAATTGCAGAGGGGCTCTGTTTCTGAACAGAGGAGCAAGTCCATGGTGGATGTCTTGCTTGATCTGCAAGAAACTGATCCCGAGTATTATAGCAATGAAATCATAAGAGGCATGATACAAGTAAGCTCTCTCAACCAAATTATACGAAATACTCCAATAAAAAACCATCCAAAAAAGAAAAAAAAACGTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

100

Amino Acids

11.64

Weight (kDa)

9.89

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021271)

Species Orthologous Gene IDs
pyrus_communis pycom08g07300
rosa_chinensis RchiOBHm_Chr6g0309041
rosa_rugosa Rorug06G0369300
rosa_samantha Rh6BG490700 Rh6DG482800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 292
AclWI GGATC 1 cut(s) 176
AcsI RAATTY 1 cut(s) 85
AcuI CTGAAG 1 cut(s) 32
AgsI TTSAA 1 cut(s) 95
AluBI AGCT 1 cut(s) 231
AluI AGCT 1 cut(s) 231
AlwI GGATC 1 cut(s) 176
Ama87I CYCGRG 1 cut(s) 185
ApoI RAATTY 1 cut(s) 85
AvaI CYCGRG 1 cut(s) 185
BanII GRGCYC 1 cut(s) 122
BccI CCATC 1 cut(s) 279
BfaI CTAG 1 cut(s) 298
BmeT110I CYCGRG 1 cut(s) 185
BpuEI CTTGAG 1 cut(s) 56
BsaJI CCNNGG 1 cut(s) 147
Bse118I RCCGGY 1 cut(s) 4
Bse3DI GCAATG 1 cut(s) 205
BseDI CCNNGG 1 cut(s) 147
BseGI GGATG 3 cut(s) 76, 160, 271
BseMI GCAATG 1 cut(s) 205
BseRI GAGGAG 1 cut(s) 151
BsiHKCI CYCGRG 1 cut(s) 185
BsiSI CCGG 1 cut(s) 5
BsoBI CYCGRG 1 cut(s) 185
Bsp1286I GDGCHC 1 cut(s) 122
Bsp143I GATC 2 cut(s) 166, 181
Bsp19I CCATGG 1 cut(s) 147
BspPI GGATC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 205
BsrFI RCCGGY 1 cut(s) 4
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 1 cut(s) 147
BssMI GATC 2 cut(s) 166, 181
BssT1I CCWWGG 1 cut(s) 147
BstDSI CCRYGG 1 cut(s) 147
BstF5I GGATG 3 cut(s) 76, 160, 271
BstKTI GATC 2 cut(s) 169, 184
BstMBI GATC 2 cut(s) 166, 181
BstMWI GCNNNNNNNGC 1 cut(s) 169
BtgI CCRYGG 1 cut(s) 147
BtsCI GGATG 3 cut(s) 76, 160, 271
Cfr10I RCCGGY 1 cut(s) 4
CviAII CATG 3 cut(s) 79, 148, 217
CviJI RGCY 3 cut(s) 34, 120, 231
CviKI_1 RGCY 3 cut(s) 34, 120, 231
DpnI GATC 2 cut(s) 168, 183
DpnII GATC 2 cut(s) 166, 181
Eco130I CCWWGG 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 122
Eco57I CTGAAG 1 cut(s) 32
Eco88I CYCGRG 1 cut(s) 185
EcoT14I CCWWGG 1 cut(s) 147
EcoT38I GRGCYC 1 cut(s) 122
ErhI CCWWGG 1 cut(s) 147
FaeI CATG 3 cut(s) 82, 151, 220
FaiI YATR 7 cut(s) 80, 102, 149, 195, 209, 218, 248
FatI CATG 3 cut(s) 78, 147, 216
FokI GGATG 3 cut(s) 83, 167, 258
FriOI GRGCYC 1 cut(s) 122
FspBI CTAG 1 cut(s) 298
HapII CCGG 1 cut(s) 5
Hin1II CATG 3 cut(s) 82, 151, 220
HpaII CCGG 1 cut(s) 5
Hpy188I TCNGA 2 cut(s) 12, 130
Hpy188III TCNNGA 1 cut(s) 185
HpyAV CCTTC 1 cut(s) 61
HpyCH4IV ACGT 1 cut(s) 292
HpyCH4V TGCA 4 cut(s) 58, 82, 112, 172
HpyF10VI GCNNNNNNNGC 1 cut(s) 169
HpySE526I ACGT 1 cut(s) 292
Hsp92II CATG 3 cut(s) 82, 151, 220
Kzo9I GATC 2 cut(s) 166, 181
LmnI GCTCC 1 cut(s) 138
LpnPI CCDG 1 cut(s) 18
MaeI CTAG 1 cut(s) 298
MaeII ACGT 1 cut(s) 292
MaeIII GTNAC 1 cut(s) 25
MalI GATC 2 cut(s) 168, 183
MboI GATC 2 cut(s) 166, 181
MboII GAAGA 3 cut(s) 52, 76, 107
MhlI GDGCHC 1 cut(s) 122
MluCI AATT 3 cut(s) 85, 107, 243
MnlI CCTC 3 cut(s) 108, 129, 206
MspI CCGG 1 cut(s) 5
MwoI GCNNNNNNNGC 1 cut(s) 169
NcoI CCATGG 1 cut(s) 147
NdeII GATC 2 cut(s) 166, 181
NlaIII CATG 3 cut(s) 82, 151, 220
Psp1406I AACGTT 1 cut(s) 292
Sau3AI GATC 2 cut(s) 166, 181
SduI GDGCHC 1 cut(s) 122
SetI ASST 2 cut(s) 233, 295
SmlI CTYRAG 1 cut(s) 35
SmoI CTYRAG 1 cut(s) 35
Sse9I AATT 3 cut(s) 85, 107, 243
SspMI CTAG 1 cut(s) 298
StyI CCWWGG 1 cut(s) 147
TaiI ACGT 1 cut(s) 295
TasI AATT 3 cut(s) 85, 107, 243
TspDTI ATGAA 2 cut(s) 67, 216
XapI RAATTY 1 cut(s) 85
XspI CTAG 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.