Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0015007

Physical Location & Seq

Genomic Coordinates Reverse (-)

16915632 .. 16917071

Gene Structure 1440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g16820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGCATTCTTTCTTTCCTCAGCTTATCTCGACTCCAGTCATGGACTTGAAGAATACTTCCCCATTTTTCTTCATTGCCCTATTGATCTCTGTTACCAAAGCCCTTGATCCTTCTTGTGCCTCCCAATCTGACGGCTCCGATGACCTCTCCATCATTCCCACCTACAGCAAATGCTCTCCCTTCTCCCCACCCAAAACAGACTCTTTGGTCACCACTGTCCTCAACATGGCCTCCAAAGATCCAGCTAGGGTTAACTACTTGTCAACCCTAGTGGCCCAAAAGACCACCTCTGCTCCGATTGCTTCAGGCCAGCAGGTCCTCAACATTGCCAACTACGTGGTCCAGCTCAAGGTCGGTACCCCGGGTCAACTCATGAACATGGTCCTAGACACTAGCAACGACATTACTTGGGCCCCATGTTCCGGCTGCACGGGGTGCTCCTCTACCACCTTCTCACCCAACTCATCGAGCACATATGGGTCACTTGAATGCTCAGTGCCCGAATGTGCTCAAGCTCGCGGACTCTCGTGCCCGGCCACTGGGTCTACTGGGACCAATGTTTGCTTCTTTAACCAATCGTACGGTGGAGATTCATCATTTTCTGCCACCTTAGTGCAAGATGCTTTGAGATTAGGTACAGATGTCATTCCCAAATACTCTTTTGGTTGCATCAATTCCATCTCGGGTGGGTCCGTCCCTTCTCAAGGGTTATTAGGCCTGGGTCGCGGATCCATGTCGTTACTCTCACAATCCGGGTCGCTCTACTCGGGTGTGTTTTCGTATTGTTTACCAAGTTTCAAATCATACTACTTTTCGGGGTCACTCAAGCTTGGCCAGCCAGGCCAGCCCAAGTCAATCCGGACCACCCCACTTCTAAGAAACCCACGCCGTCCGTCACTGTACTATGTCAACCTGACCGGAATCAGTGTGGGCCGGGTTCTCGTACCGATTTCCCCAGATGTTCTAGCATTCAACCCTAACACCGGGGCGGGAACAATCATAGACTCGGGCACAGTCATAACTCGATTCGTGCCACCCGTCTACACGGCACTCCGCGACGAATTTAGAAAACAAGTGAATGGAACATTTTCGTCATTGGGAGCCTTTGACACTTGTTTTTCTGCCACCAATGAAGTTGTGGCCCCAGCCATTACGTTGCAATTCACGGGGTTGAAGTTGACACTGCCATTGGAGAACAGCTTGATTCACAGCAGCTCAGGCTCACTGGCTTGCTTAGCGATGGCGGCAGCTCCCAATAATGTGAACTCGGTGTTGAACGTGATAGCCAATTTGCAGCAGCAGAACCTTAGAATTTTGTTTGACGTTGCCAACTCTGTCGTTGGCATTGCTCGTGAGAGTTGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009505 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0010941 GO:0016787 GO:0019538 GO:0030163 GO:0030312 GO:0043067 GO:0043170 GO:0043207 GO:0044238 GO:0044464 GO:0045087 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

456

Amino Acids

47.92

Weight (kDa)

8.34

Isoelectric Point (pI)

45.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	111 - 451	5.9e-14	Eukaryotic aspartyl protease
TAXi_N	PF14543	112 - 278	8.5e-32	Xylanase inhibitor N-terminal
TAXi_C	PF14541	301 - 450	2.3e-28	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09750
fragaria_vesca	FvH4_5g35540
malus_domestica	MD08G1195800.v1.1 MD15G1383700.v1.1
prunus_persica	Prupe.1G529800_v2.0.a1
pyrus_communis	pycom08g16820 pycom15g34330
rosa_chinensis	RchiOBHm_Chr7g0236921
rosa_laevigata	RLG00000001048
rosa_roxburghii	Rroxscaffold_3G00224690
rosa_rugosa	Rorug07G0301000
rosa_samantha	Rh7AG455900 Rh7BG427200 Rh7CG474700 Rh7DG443800
rosa_wichuraiana	Rw7G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	206
Acc36I	ACCTGC	1 cut(s)	304
Acc65I	GGTACC	1 cut(s)	356
AccB1I	GGYRCC	1 cut(s)	356
AccI	GTMKAC	2 cut(s)	545, 1041
AccII	CGCG	3 cut(s)	519, 726, 1056
AccIII	TCCGGA	1 cut(s)	858
AciI	CCGC	5 cut(s)	519, 726, 989, 1054, 1244
AclWI	GGATC	4 cut(s)	101, 233, 723, 736
AcoI	YGGCCR	2 cut(s)	534, 832
AcsI	RAATTY	2 cut(s)	1061, 1311
AcuI	CTGAAG	1 cut(s)	288
AdeI	CACNNNGTG	1 cut(s)	435
AfaI	GTAC	5 cut(s)	358, 581, 637, 902, 945
AfiI	CCNNNNNNNGG	6 cut(s)	226, 349, 422, 539, 704, 983
AgsI	TTSAA	6 cut(s)	49, 488, 799, 973, 1174, 1276
AjnI	CCWGG	2 cut(s)	717, 838
AjuI	GAANNNNNNNTTGG	2 cut(s)	548, 580
AleI	CACNNNNGTG	1 cut(s)	611
AluBI	AGCT	8 cut(s)	22, 245, 346, 515, 829, 1200, 1215, 1250
AluI	AGCT	8 cut(s)	22, 245, 346, 515, 829, 1200, 1215, 1250
Alw21I	GWGCWC	3 cut(s)	440, 473, 511
AlwI	GGATC	4 cut(s)	101, 233, 723, 736
Ama87I	CYCGRG	4 cut(s)	361, 682, 766, 1006
Aor13HI	TCCGGA	1 cut(s)	858
ApaI	GGGCCC	1 cut(s)	415
ApeKI	GCWGC	5 cut(s)	426, 1212, 1247, 1294, 1297
ApoI	RAATTY	2 cut(s)	1061, 1311
Asp700I	GAANNNNTTC	1 cut(s)	1087
Asp718I	GGTACC	1 cut(s)	356
AsuC2I	CCSGG	6 cut(s)	362, 363, 533, 754, 935, 985
AsuHPI	GGTGA	2 cut(s)	202, 447
AvaI	CYCGRG	4 cut(s)	361, 682, 766, 1006
AvaII	GGWCC	6 cut(s)	316, 340, 382, 552, 690, 861
BaeGI	GKGCMC	4 cut(s)	415, 501, 533, 1013
BaeI	ACNNNNGTAYC	2 cut(s)	627, 660
BalI	TGGCCA	1 cut(s)	834
BamHI	GGATCC	1 cut(s)	728
BanI	GGYRCC	1 cut(s)	356
BanII	GRGCYC	1 cut(s)	415
BauI	CACGAG	2 cut(s)	526, 1350
Bbv12I	GWGCWC	3 cut(s)	440, 473, 511
BbvCI	CCTCAGC	1 cut(s)	18
BbvI	GCAGC	5 cut(s)	413, 1224, 1259, 1306, 1309
BccI	CCATC	3 cut(s)	158, 686, 1234
BceAI	ACGGC	3 cut(s)	148, 873, 1062
BciT130I	CCWGG	2 cut(s)	719, 840
BcnI	CCSGG	6 cut(s)	362, 363, 533, 754, 935, 985
BfaI	CTAG	5 cut(s)	246, 269, 386, 393, 965
BfmI	CTRYAG	1 cut(s)	163
BfuAI	ACCTGC	1 cut(s)	304
BglI	GCCNNNNNGGC	1 cut(s)	840
BisI	GCNGC	6 cut(s)	427, 1213, 1245, 1248, 1295, 1298
BlpI	GCTNAGC	1 cut(s)	1234
BlsI	GCNGC	6 cut(s)	428, 1214, 1246, 1249, 1296, 1299
Bme1390I	CCNGG	8 cut(s)	362, 363, 533, 719, 754, 840, 935, 985
Bme18I	GGWCC	6 cut(s)	316, 340, 382, 552, 690, 861
BmeT110I	CYCGRG	4 cut(s)	361, 682, 766, 1006
BmiI	GGNNCC	9 cut(s)	136, 358, 413, 414, 553, 691, 730, 1102, 1143
BmrFI	CCNGG	8 cut(s)	362, 363, 533, 719, 754, 840, 935, 985
BmrI	ACTGGG	2 cut(s)	549, 558
BmsI	GCATC	2 cut(s)	610, 678
BmuI	ACTGGG	2 cut(s)	549, 558
BoxI	GACNNNNGTC	1 cut(s)	35
BpmI	CTGGAG	1 cut(s)	18
Bpu10I	CCTNAGC	2 cut(s)	18, 1216
Bpu1102I	GCTNAGC	1 cut(s)	1234
BpuEI	CTTGAG	4 cut(s)	332, 495, 687, 809
BpuMI	CCSGG	6 cut(s)	362, 363, 533, 754, 935, 985
BsaAI	YACGTR	1 cut(s)	337
BsaJI	CCNNGG	4 cut(s)	360, 361, 718, 984
BsaWI	WCCGGW	2 cut(s)	858, 917
BsaXI	ACNNNNNCTCC	4 cut(s)	215, 245, 277, 307
Bsc4I	CCNNNNNNNGG	6 cut(s)	226, 349, 422, 539, 704, 983
Bse1I	ACTGG	4 cut(s)	35, 544, 553, 1230
Bse3DI	GCAATG	3 cut(s)	72, 324, 1344
BseAI	TCCGGA	1 cut(s)	858
BseBI	CCWGG	2 cut(s)	719, 840
BseDI	CCNNGG	4 cut(s)	360, 361, 718, 984
BseLI	CCNNNNNNNGG	6 cut(s)	226, 349, 422, 539, 704, 983
BseMI	GCAATG	3 cut(s)	72, 324, 1344
BseMII	CTCAG	3 cut(s)	32, 507, 1230
BseNI	ACTGG	4 cut(s)	35, 544, 553, 1230
BseRI	GAGGAG	1 cut(s)	430
BseSI	GKGCMC	4 cut(s)	415, 501, 533, 1013
BseXI	GCAGC	5 cut(s)	413, 1224, 1259, 1306, 1309
BseYI	CCCAGC	1 cut(s)	1144
BsgI	GTGCAG	1 cut(s)	412
Bsh1236I	CGCG	3 cut(s)	519, 726, 1056
BshNI	GGYRCC	1 cut(s)	356
BsiHKAI	GWGCWC	3 cut(s)	440, 473, 511
BsiHKCI	CYCGRG	4 cut(s)	361, 682, 766, 1006
BsiSI	CCGG	8 cut(s)	362, 423, 533, 753, 859, 918, 934, 984
BsiWI	CGTACG	1 cut(s)	579
BslFI	GGGAC	2 cut(s)	565, 680
BslI	CCNNNNNNNGG	6 cut(s)	226, 349, 422, 539, 704, 983
BsmFI	GGGAC	2 cut(s)	565, 680
BsmI	GAATGC	3 cut(s)	4, 494, 968
BsoBI	CYCGRG	4 cut(s)	361, 682, 766, 1006
Bsp120I	GGGCCC	1 cut(s)	411
Bsp1286I	GDGCHC	7 cut(s)	415, 440, 473, 501, 511, 533, 1013
Bsp13I	TCCGGA	1 cut(s)	858
Bsp143I	GATC	4 cut(s)	84, 106, 238, 728
Bsp1720I	GCTNAGC	1 cut(s)	1234
BspACI	CCGC	5 cut(s)	519, 726, 989, 1054, 1244
BspCNI	CTCAG	3 cut(s)	31, 506, 1229
BspEI	TCCGGA	1 cut(s)	858
BspFNI	CGCG	3 cut(s)	519, 726, 1056
BspHI	TCATGA	1 cut(s)	372
BspLI	GGNNCC	9 cut(s)	136, 358, 413, 414, 553, 691, 730, 1102, 1143
BspMI	ACCTGC	1 cut(s)	304
BspPI	GGATC	4 cut(s)	101, 233, 723, 736
BspT107I	GGYRCC	1 cut(s)	356
BsrDI	GCAATG	3 cut(s)	72, 324, 1344
BsrI	ACTGG	4 cut(s)	35, 544, 553, 1230
BssECI	CCNNGG	4 cut(s)	360, 361, 718, 984
BssMI	GATC	4 cut(s)	84, 106, 238, 728
BssSI	CACGAG	2 cut(s)	526, 1350
Bst2BI	CACGAG	2 cut(s)	526, 1350
Bst2UI	CCWGG	2 cut(s)	719, 840
Bst4CI	ACNGT	4 cut(s)	217, 584, 900, 1015
BstAPI	GCANNNNNTGC	1 cut(s)	435
BstBAI	YACGTR	1 cut(s)	337
BstC8I	GCNNGC	5 cut(s)	311, 517, 836, 845, 1231
BstDEI	CTNAG	7 cut(s)	18, 493, 610, 875, 1216, 1234, 1307
BstEII	GGTNACC	1 cut(s)	208
BstENI	CCTNNNNNAGG	1 cut(s)	702
BstFNI	CGCG	3 cut(s)	519, 726, 1056
BstKTI	GATC	4 cut(s)	87, 109, 241, 731
BstMBI	GATC	4 cut(s)	84, 106, 238, 728
BstMWI	GCNNNNNNNGC	9 cut(s)	299, 435, 723, 835, 840, 844, 1218, 1235, 1244
BstNI	CCWGG	2 cut(s)	719, 840
BstPAI	GACNNNNGTC	1 cut(s)	35
BstPI	GGTNACC	1 cut(s)	208
BstSCI	CCNGG	8 cut(s)	360, 361, 531, 717, 752, 838, 933, 983
BstSFI	CTRYAG	1 cut(s)	163
BstSLI	GKGCMC	4 cut(s)	415, 501, 533, 1013
BstUI	CGCG	3 cut(s)	519, 726, 1056
BstV1I	GCAGC	5 cut(s)	413, 1224, 1259, 1306, 1309
BstX2I	RGATCY	2 cut(s)	238, 728
BstXI	CCANNNNNNTGG	1 cut(s)	337
BstYI	RGATCY	2 cut(s)	238, 728
BtgZI	GCGATG	1 cut(s)	1253
BtsI	GCAGTG	1 cut(s)	1181
BtsIMutI	CAGTG	7 cut(s)	213, 501, 537, 896, 931, 1181, 1223
BveI	ACCTGC	1 cut(s)	304
Cac8I	GCNNGC	5 cut(s)	311, 517, 836, 845, 1231
CciI	TCATGA	1 cut(s)	372
Cfr9I	CCCGGG	1 cut(s)	361
Csp6I	GTAC	5 cut(s)	357, 580, 636, 901, 944
CspCI	CAANNNNNGTGG	2 cut(s)	252, 287
CviAII	CATG	6 cut(s)	40, 226, 373, 379, 417, 733
CviQI	GTAC	5 cut(s)	357, 580, 636, 901, 944
DdeI	CTNAG	7 cut(s)	18, 493, 610, 875, 1216, 1234, 1307
DpnI	GATC	4 cut(s)	86, 108, 240, 730
DpnII	GATC	4 cut(s)	84, 106, 238, 728
DraIII	CACNNNGTG	1 cut(s)	435
DrdI	GACNNNNNNGTC	1 cut(s)	206
DseDI	GACNNNNNNGTC	1 cut(s)	206
EaeI	YGGCCR	2 cut(s)	534, 832
Eco147I	AGGCCT	1 cut(s)	717
Eco24I	GRGCYC	1 cut(s)	415
Eco47I	GGWCC	6 cut(s)	316, 340, 382, 552, 690, 861
Eco57I	CTGAAG	1 cut(s)	288
Eco88I	CYCGRG	4 cut(s)	361, 682, 766, 1006
Eco91I	GGTNACC	1 cut(s)	208
EcoNI	CCTNNNNNAGG	1 cut(s)	702
EcoO109I	RGGNCCY	2 cut(s)	316, 412
EcoO65I	GGTNACC	1 cut(s)	208
EcoRII	CCWGG	2 cut(s)	717, 838
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	415
FaeI	CATG	6 cut(s)	43, 229, 376, 382, 420, 736
FaqI	GGGAC	2 cut(s)	565, 680
FatI	CATG	6 cut(s)	39, 225, 372, 378, 416, 732
FauI	CCCGC	1 cut(s)	982
FauNDI	CATATG	1 cut(s)	475
FblI	GTMKAC	2 cut(s)	545, 1041
Fnu4HI	GCNGC	6 cut(s)	427, 1213, 1245, 1248, 1295, 1298
FriOI	GRGCYC	1 cut(s)	415
Fsp4HI	GCNGC	6 cut(s)	427, 1213, 1245, 1248, 1295, 1298
FspBI	CTAG	5 cut(s)	246, 269, 386, 393, 965
GluI	GCNGC	6 cut(s)	427, 1213, 1245, 1248, 1295, 1298
GsaI	CCCAGC	1 cut(s)	1148
GsuI	CTGGAG	1 cut(s)	18
HapII	CCGG	8 cut(s)	362, 423, 533, 753, 859, 918, 934, 984
Hin1II	CATG	6 cut(s)	43, 229, 376, 382, 420, 736
HincII	GTYRAC	5 cut(s)	253, 264, 368, 910, 1179
HindII	GTYRAC	5 cut(s)	253, 264, 368, 910, 1179
HindIII	AAGCTT	1 cut(s)	827
HinfI	GANTC	8 cut(s)	31, 200, 522, 590, 921, 1004, 1026, 1204
HpaI	GTTAAC	1 cut(s)	253
HpaII	CCGG	8 cut(s)	362, 423, 533, 753, 859, 918, 934, 984
HphI	GGTGA	2 cut(s)	202, 447
Hpy166II	GTNNAC	9 cut(s)	253, 264, 368, 546, 788, 910, 1042, 1179, 1264
Hpy188I	TCNGA	3 cut(s)	130, 139, 297
Hpy188III	TCNNGA	4 cut(s)	28, 373, 859, 1352
Hpy8I	GTNNAC	9 cut(s)	253, 264, 368, 546, 788, 910, 1042, 1179, 1264
Hpy99I	CGWCG	1 cut(s)	1061
HpyAV	CCTTC	4 cut(s)	120, 190, 460, 708
HpyCH4III	ACNGT	4 cut(s)	217, 584, 900, 1015
HpyCH4IV	ACGT	4 cut(s)	336, 1154, 1278, 1323
HpyCH4V	TGCA	6 cut(s)	4, 429, 616, 669, 1159, 1294
HpyF10VI	GCNNNNNNNGC	9 cut(s)	299, 435, 723, 835, 840, 844, 1218, 1235, 1244
HpyF3I	CTNAG	7 cut(s)	18, 493, 610, 875, 1216, 1234, 1307
HpySE526I	ACGT	4 cut(s)	336, 1154, 1278, 1323
Hsp92II	CATG	6 cut(s)	43, 229, 376, 382, 420, 736
Kpn2I	TCCGGA	1 cut(s)	858
KpnI	GGTACC	1 cut(s)	360
KspAI	GTTAAC	1 cut(s)	253
Kzo9I	GATC	4 cut(s)	84, 106, 238, 728
LmnI	GCTCC	5 cut(s)	140, 298, 443, 1100, 1255
Lsp1109I	GCAGC	5 cut(s)	413, 1224, 1259, 1306, 1309
LweI	GCATC	2 cut(s)	610, 678
MaeI	CTAG	5 cut(s)	246, 269, 386, 393, 965
MaeII	ACGT	4 cut(s)	336, 1154, 1278, 1323
MaeIII	GTNAC	6 cut(s)	91, 208, 480, 738, 819, 894
MalI	GATC	4 cut(s)	86, 108, 240, 730
MboI	GATC	4 cut(s)	84, 106, 238, 728
MboII	GAAGA	2 cut(s)	61, 61
MflI	RGATCY	2 cut(s)	238, 728
MhlI	GDGCHC	7 cut(s)	415, 440, 473, 501, 511, 533, 1013
MlsI	TGGCCA	1 cut(s)	834
MluCI	AATT	6 cut(s)	673, 1061, 1160, 1288, 1311, 1363
MluNI	TGGCCA	1 cut(s)	834
MlyI	GAGTC	4 cut(s)	25, 194, 516, 998
MnlI	CCTC	8 cut(s)	27, 130, 155, 230, 241, 298, 329, 451
Mox20I	TGGCCA	1 cut(s)	834
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	858
MroXI	GAANNNNTTC	1 cut(s)	1087
MscI	TGGCCA	1 cut(s)	834
MseI	TTAA	3 cut(s)	252, 570, 1366
MslI	CAYNNNNRTG	3 cut(s)	377, 487, 611
Msp20I	TGGCCA	1 cut(s)	834
MspI	CCGG	8 cut(s)	362, 423, 533, 753, 859, 918, 934, 984
MspR9I	CCNGG	8 cut(s)	362, 363, 533, 719, 754, 840, 935, 985
Mva1269I	GAATGC	3 cut(s)	4, 494, 968
MvaI	CCWGG	2 cut(s)	719, 840
MvnI	CGCG	3 cut(s)	519, 726, 1056
MwoI	GCNNNNNNNGC	9 cut(s)	299, 435, 723, 835, 840, 844, 1218, 1235, 1244
NciI	CCSGG	6 cut(s)	362, 363, 533, 754, 935, 985
NdeI	CATATG	1 cut(s)	475
NdeII	GATC	4 cut(s)	84, 106, 238, 728
NlaIII	CATG	6 cut(s)	43, 229, 376, 382, 420, 736
NlaIV	GGNNCC	9 cut(s)	136, 358, 413, 414, 553, 691, 730, 1102, 1143
NmuCI	GTSAC	4 cut(s)	208, 480, 819, 894
NsiI	ATGCAT	1 cut(s)	6
OliI	CACNNNNGTG	1 cut(s)	611
PagI	TCATGA	1 cut(s)	372
PceI	AGGCCT	1 cut(s)	717
PcsI	WCGNNNNNNNCGW	1 cut(s)	1035
PctI	GAATGC	3 cut(s)	4, 494, 968
PdmI	GAANNNNTTC	1 cut(s)	1087
PfeI	GAWTC	4 cut(s)	590, 921, 1026, 1204
Pfl23II	CGTACG	1 cut(s)	579
PkrI	GCNGC	6 cut(s)	428, 1214, 1246, 1249, 1296, 1299
PleI	GAGTC	4 cut(s)	25, 194, 516, 998
PpsI	GAGTC	4 cut(s)	25, 194, 516, 998
Ppu21I	YACGTR	1 cut(s)	337
PpuMI	RGGWCCY	1 cut(s)	316
PshAI	GACNNNNGTC	1 cut(s)	35
Psp5II	RGGWCCY	1 cut(s)	316
Psp6I	CCWGG	2 cut(s)	717, 838
PspEI	GGTNACC	1 cut(s)	208
PspFI	CCCAGC	1 cut(s)	1144
PspGI	CCWGG	2 cut(s)	717, 838
PspLI	CGTACG	1 cut(s)	579
PspN4I	GGNNCC	9 cut(s)	136, 358, 413, 414, 553, 691, 730, 1102, 1143
PspOMI	GGGCCC	1 cut(s)	411
PspPPI	RGGWCCY	1 cut(s)	316
PsuI	RGATCY	2 cut(s)	238, 728
RsaI	GTAC	5 cut(s)	358, 581, 637, 902, 945
RsaNI	GTAC	5 cut(s)	357, 580, 636, 901, 944
RseI	CAYNNNNRTG	3 cut(s)	377, 487, 611
SaqAI	TTAA	3 cut(s)	252, 570, 1366
SatI	GCNGC	6 cut(s)	427, 1213, 1245, 1248, 1295, 1298
Sau3AI	GATC	4 cut(s)	84, 106, 238, 728
SchI	GAGTC	4 cut(s)	25, 194, 516, 998
ScrFI	CCNGG	8 cut(s)	362, 363, 533, 719, 754, 840, 935, 985
SduI	GDGCHC	7 cut(s)	415, 440, 473, 501, 511, 533, 1013
SfaNI	GCATC	2 cut(s)	610, 678
SfcI	CTRYAG	1 cut(s)	163
SfiI	GGCCNNNNNGGCC	1 cut(s)	840
SinI	GGWCC	6 cut(s)	316, 340, 382, 552, 690, 861
SmaI	CCCGGG	1 cut(s)	363
SmiMI	CAYNNNNRTG	3 cut(s)	377, 487, 611
SmlI	CTYRAG	4 cut(s)	347, 510, 702, 824
SmoI	CTYRAG	4 cut(s)	347, 510, 702, 824
Sse9I	AATT	6 cut(s)	673, 1061, 1160, 1288, 1311, 1363
SseBI	AGGCCT	1 cut(s)	717
SsiI	CCGC	5 cut(s)	519, 726, 989, 1054, 1244
SspMI	CTAG	5 cut(s)	246, 269, 386, 393, 965
StuI	AGGCCT	1 cut(s)	717
StyD4I	CCNGG	8 cut(s)	360, 361, 531, 717, 752, 838, 933, 983
TaaI	ACNGT	4 cut(s)	217, 584, 900, 1015
TaiI	ACGT	4 cut(s)	339, 1157, 1281, 1326
TaqI	TCGA	3 cut(s)	29, 467, 1024
TasI	AATT	6 cut(s)	673, 1061, 1160, 1288, 1311, 1363
TatI	WGTACW	1 cut(s)	900
TauI	GCSGC	1 cut(s)	1247
TfiI	GAWTC	4 cut(s)	590, 921, 1026, 1204
Tru1I	TTAA	3 cut(s)	252, 570, 1366
Tru9I	TTAA	3 cut(s)	252, 570, 1366
TscAI	CASTG	7 cut(s)	220, 501, 544, 903, 931, 1188, 1230
TseFI	GTSAC	4 cut(s)	208, 480, 819, 894
TseI	GCWGC	5 cut(s)	426, 1212, 1247, 1294, 1297
Tsp45I	GTSAC	4 cut(s)	208, 480, 819, 894
TspDTI	ATGAA	4 cut(s)	61, 389, 582, 1146
TspGWI	ACGGA	2 cut(s)	682, 882
TspMI	CCCGGG	1 cut(s)	361
TspRI	CASTG	7 cut(s)	220, 501, 544, 903, 931, 1188, 1230
VpaK11BI	GGWCC	6 cut(s)	316, 340, 382, 552, 690, 861
XagI	CCTNNNNNAGG	1 cut(s)	702
XapI	RAATTY	2 cut(s)	1061, 1311
XcmI	CCANNNNNNNNNTGG	2 cut(s)	581, 1135
XmaI	CCCGGG	1 cut(s)	361
XmiI	GTMKAC	2 cut(s)	545, 1041
XmnI	GAANNNNTTC	1 cut(s)	1087
XspI	CTAG	5 cut(s)	246, 269, 386, 393, 965
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.