Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0015007

Physical Location & Seq

Genomic Coordinates Forward (+)

62986277 .. 62991618

Gene Structure 5342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG443800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGAGGCTGCTCTCGTGGAATTGCCAGGGTTTGGGTGCTTCCCTGACAGGAAAGCATCTCAAACGGTTGTGCAAAACCCAAAATCCTGACATCTTGTTTTTGATGGAAACTCGTCAATCGGAGGATATAATTAGGTGTTGGAAACGCAGGCTGAAGTTCCCAAACCACTATGTTGTTAACCCCGTCGGTACTGGAGGCGGATTGGCTCTCTTCTGGGGTGATTCGGTTCAACTCAATATTATAGATAAGTCTCCCAATTTTGTGGATACACATGTTTCCTTTGTTTCTGAAGCTTTTGTGTGTAAAATCACTTGGTTGTATGGTATCCCTCATGAAAATGCAAAGGCGACCTTTTGGCGCTCCATGTATAACAGATTTGGTCCCAATACTCAACCATGGATTGTTATTGGGGATTGCAATGAGGTTATCAGTCCTTCTGAGAAATGGGGAGGTGCACCACCAGACCTCTGGCGTATGAATTTATTCATGGACTTCATCAACAACGCTCAACTAAAGGATTTGCATTTTCAAGGGCCAAACTACACTTGGTTTGCTATCCGTCATGGCCGGGTGTATATAAAAGAACGATTGGATCGAGCTTTGGGCAATTTAAGCTGGTCTGCAACACAATCACGCTCCCAAGTGTTCCATCTTCCAAAAGTTGGCTCTGATCATAGGCCAATACTACTGGACACCCAACCTCATGAAACTAAAGGTCCTCCCATTTTCAGGTTTGAGCATTACTGGACTACGCATGAGCACTTCACTGCTTTAATTGCTGCTGTTTGGAAGACAGATACAGGCTCTGCTGCTATGCCTGCTTGGTCTCAAAATTTGAAAAATTGCAAACGCTCTATTTTGTCTTGGTGCAAATCTGTGTTTCCTAATAATCATGCTCGGACAACTGATATGCTTGTTGCTCTTGAAAGCTTGTATGCATCTTCTGATCCAAATGTCCTAAACATTCCCAGTTACATAGTCCAGATCAAGTTGGGCACCCCGGGCCAGCTCATGTACATGGTCCTTGACACAAGCAACGACATTGCATGGGTCCCATGCTCGGGGTGCACCGGGTGCTCCTCCACCACATTCTCGCCCAACGCGTCCACAACTTACGGGCCGTTGGACTGCTCGGTGCCCGAATGCGCCCAGGCCCGCGGGCTCTCATGCCCGGCCGGGTCTCCTGTCGGGTGCTCTTTTAACCAATCGTACGGTGGAGGCTCGTCATTTTCCGCCTCGCTCGTGCAAGATGCCTTGGGATTAGGAAAAGATGTCATTCCGAAATACTCTTTTGGGTGCATCAATTCCATCTCTGGAGGGAACATCCCGCCACAGGGGCTATTGGGCTTGGGCCGCGGATCCATGTCGTTGCTCTCGCAATCCGGATCGCTTTACTCGGGAGTGTTCTCATATTGTTTACCCAGTTTCAAATCTTACTACTTTTCCGGGTCCCTCACGCTGGGCCCTGTCGGCCAGCCCAAGTCCATCAGAACCACCCCACTTCTCAAAAACCCTCGCCGGCCATCCTTGTATTACGTCAACCTCACCGGAATCAGCGTCGGCAAGGTCCTCGTGCCCATTGCCCCACAATTCCTAGCCTTTGACCCGACCACCGGCGCCGGAACCATCATAGACTCCGGCACAACAATCACCCGATTCGTGCCACCCGTCTACAACGCAATCCGAGACGAGTTCAGAAAACAAGTGAACACCACATTTTCGAGTTTAGGGGCATTCGACACTTGCTTCAACACCAACAACGAAGGCGTAGCGCCGGCCATTACGTTTCGTTTCACAGGCTTGGTGTTGAGGTTGCCACTGGAGAACAGCTTGATTCACAGTAGCTCGGGGACGCTGGCTTGCTTGGCAATGGCAGCGGCGCCCAATAATGTGAACTCGGTGCTGAATGTGATAGCCAACTTGCAGCAGCAGAACCTTAGGATTCTGTTTGATGTTGCCAACTCTCGGTTGGGCATTGCCCGTGAGCTTTGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009505 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0010941 GO:0016787 GO:0019538 GO:0030163 GO:0030312 GO:0043067 GO:0043170 GO:0043207 GO:0044238 GO:0044464 GO:0045087 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

665

Amino Acids

73.0

Weight (kDa)

9.03

Isoelectric Point (pI)

40.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	4 - 225	3.7e-12	Endonuclease/Exonuclease/phosphatase family
TAXi_N	PF14543	325 - 488	3.8e-32	Xylanase inhibitor N-terminal
Asp	PF00026	397 - 661	8.7e-10	Eukaryotic aspartyl protease
TAXi_C	PF14541	511 - 660	1.5e-28	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09750
fragaria_vesca	FvH4_5g35540
malus_domestica	MD08G1195800.v1.1 MD15G1383700.v1.1
prunus_persica	Prupe.1G529800_v2.0.a1
pyrus_communis	pycom08g16820 pycom15g34330
rosa_chinensis	RchiOBHm_Chr7g0236921
rosa_laevigata	RLG00000001048
rosa_roxburghii	Rroxscaffold_3G00224690
rosa_rugosa	Rorug07G0301000
rosa_samantha	Rh7AG455900 Rh7BG427200 Rh7CG474700 Rh7DG443800
rosa_wichuraiana	Rw7G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	995, 1135, 1616, 1879
AccB7I	CCANNNNNTGG	2 cut(s)	31, 662
AccI	GTMKAC	1 cut(s)	1671
AccII	CGCG	3 cut(s)	1103, 1158, 1356
AccIII	TCCGGA	1 cut(s)	1382
AciI	CCGC	8 cut(s)	198, 1156, 1158, 1233, 1328, 1354, 1356, 1877
AclWI	GGATC	5 cut(s)	600, 941, 1353, 1366, 1393
AcoI	YGGCCR	5 cut(s)	565, 1173, 1471, 1520, 1776
AcsI	RAATTY	2 cut(s)	478, 832
AcuI	CTGAAG	2 cut(s)	173, 309
AcyI	GRCGYC	2 cut(s)	1617, 1880
AdeI	CACNNNGTG	1 cut(s)	1074
AfaI	GTAC	3 cut(s)	190, 1016, 1211
AflIII	ACRYGT	2 cut(s)	271, 1101
AgsI	TTSAA	6 cut(s)	230, 530, 838, 926, 1429, 1750
AjnI	CCWGG	2 cut(s)	24, 1149
AluBI	AGCT	8 cut(s)	293, 599, 615, 930, 1009, 1830, 1845, 1987
AluI	AGCT	8 cut(s)	293, 599, 615, 930, 1009, 1830, 1845, 1987
Alw21I	GWGCWC	5 cut(s)	457, 762, 1070, 1079, 1196
Alw26I	GTCTC	4 cut(s)	255, 831, 1185, 1680
Alw44I	GTGCAC	2 cut(s)	453, 1066
AlwI	GGATC	5 cut(s)	600, 941, 1353, 1366, 1393
AlwNI	CAGNNNCTG	1 cut(s)	806
Ama87I	CYCGRG	4 cut(s)	1000, 1060, 1396, 1846
Aor13HI	TCCGGA	1 cut(s)	1382
ApaI	GGGCCC	1 cut(s)	1466
ApaLI	GTGCAC	2 cut(s)	453, 1066
ApeKI	GCWGC	6 cut(s)	7, 779, 809, 1874, 1924, 1927
ApoI	RAATTY	2 cut(s)	478, 832
Asp700I	GAANNNNTTC	1 cut(s)	482
AspLEI	GCGC	5 cut(s)	360, 1148, 1619, 1774, 1882
AsuC2I	CCSGG	7 cut(s)	569, 1001, 1002, 1072, 1172, 1177, 1447
AsuHPI	GGTGA	3 cut(s)	230, 1537, 1642
AvaI	CYCGRG	4 cut(s)	1000, 1060, 1396, 1846
AvaII	GGWCC	6 cut(s)	380, 716, 1021, 1051, 1449, 1567
AxyI	CCTNAGG	1 cut(s)	1937
BaeGI	GKGCMC	6 cut(s)	457, 998, 1070, 1140, 1466, 1578
BaeI	ACNNNNGTAYC	2 cut(s)	258, 291
BamHI	GGATCC	1 cut(s)	1358
BanI	GGYRCC	4 cut(s)	995, 1135, 1616, 1879
BanII	GRGCYC	2 cut(s)	1164, 1466
BauI	CACGAG	3 cut(s)	13, 1241, 1571
BbsI	GAAGAC	1 cut(s)	797
Bbv12I	GWGCWC	5 cut(s)	457, 762, 1070, 1079, 1196
BbvI	GCAGC	5 cut(s)	766, 796, 1886, 1936, 1939
BccI	CCATC	6 cut(s)	97, 657, 1316, 1493, 1531, 1634
BceAI	ACGGC	1 cut(s)	1105
BcgI	CGANNNNNNTGC	2 cut(s)	1552, 1586
BciT130I	CCWGG	2 cut(s)	26, 1151
BciVI	GTATCC	2 cut(s)	259, 335
BclI	TGATCA	1 cut(s)	670
BcnI	CCSGG	7 cut(s)	569, 1001, 1002, 1072, 1172, 1177, 1447
BcoDI	GTCTC	4 cut(s)	255, 831, 1185, 1680
BfaI	CTAG	1 cut(s)	1595
BfoI	RGCGCY	4 cut(s)	361, 1620, 1775, 1883
BfuI	GTATCC	2 cut(s)	259, 335
BglI	GCCNNNNNGGC	2 cut(s)	1336, 1470
BisI	GCNGC	8 cut(s)	8, 780, 810, 1354, 1875, 1878, 1925, 1928
BlsI	GCNGC	8 cut(s)	9, 781, 811, 1355, 1876, 1879, 1926, 1929
Bme1390I	CCNGG	9 cut(s)	26, 569, 1001, 1002, 1072, 1151, 1172, 1177, 1447
Bme18I	GGWCC	6 cut(s)	380, 716, 1021, 1051, 1449, 1567
BmeT110I	CYCGRG	4 cut(s)	1000, 1060, 1396, 1846
BmrFI	CCNGG	9 cut(s)	26, 569, 1001, 1002, 1072, 1151, 1172, 1177, 1447
BmrI	ACTGGG	2 cut(s)	963, 1416
BmsI	GCATC	4 cut(s)	64, 947, 1240, 1308
BmuI	ACTGGG	2 cut(s)	963, 1416
BpiI	GAAGAC	1 cut(s)	797
BpmI	CTGGAG	3 cut(s)	213, 1335, 1841
BpuMI	CCSGG	7 cut(s)	569, 1001, 1002, 1072, 1172, 1177, 1447
BsaHI	GRCGYC	2 cut(s)	1617, 1880
BsaI	GGTCTC	2 cut(s)	831, 1185
BsaJI	CCNNGG	8 cut(s)	25, 395, 999, 1000, 1149, 1156, 1254, 1354
BsaWI	WCCGGW	2 cut(s)	1382, 1547
Bse118I	RCCGGY	3 cut(s)	1518, 1613, 1774
Bse1I	ACTGG	6 cut(s)	196, 693, 749, 969, 1422, 1824
Bse21I	CCTNAGG	1 cut(s)	1937
Bse3DI	GCAATG	5 cut(s)	424, 1041, 1578, 1875, 1974
BseAI	TCCGGA	1 cut(s)	1382
BseBI	CCWGG	2 cut(s)	26, 1151
BseDI	CCNNGG	8 cut(s)	25, 395, 999, 1000, 1149, 1156, 1254, 1354
BseGI	GGATG	2 cut(s)	1323, 1523
BseMI	GCAATG	5 cut(s)	424, 1041, 1578, 1875, 1974
BseMII	CTCAG	1 cut(s)	429
BseNI	ACTGG	6 cut(s)	196, 693, 749, 969, 1422, 1824
BseRI	GAGGAG	1 cut(s)	1069
BseSI	GKGCMC	6 cut(s)	457, 998, 1070, 1140, 1466, 1578
BseX3I	CGGCCG	1 cut(s)	1173
BseXI	GCAGC	5 cut(s)	766, 796, 1886, 1936, 1939
BseYI	CCCAGC	1 cut(s)	1459
Bsh1236I	CGCG	3 cut(s)	1103, 1158, 1356
Bsh1285I	CGRYCG	1 cut(s)	1176
BshNI	GGYRCC	4 cut(s)	995, 1135, 1616, 1879
BsiEI	CGRYCG	1 cut(s)	1176
BsiHKAI	GWGCWC	5 cut(s)	457, 762, 1070, 1079, 1196
BsiHKCI	CYCGRG	4 cut(s)	1000, 1060, 1396, 1846
BsiWI	CGTACG	1 cut(s)	1209
BslFI	GGGAC	4 cut(s)	366, 1037, 1435, 1864
BsmAI	GTCTC	4 cut(s)	255, 831, 1185, 1680
BsmBI	CGTCTC	1 cut(s)	1680
BsmFI	GGGAC	4 cut(s)	366, 1037, 1435, 1864
BsmI	GAATGC	2 cut(s)	1148, 1733
Bso31I	GGTCTC	2 cut(s)	831, 1185
BsoBI	CYCGRG	4 cut(s)	1000, 1060, 1396, 1846
Bsp120I	GGGCCC	1 cut(s)	1462
Bsp13I	TCCGGA	1 cut(s)	1382
Bsp1407I	TGTACA	1 cut(s)	1014
Bsp143I	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
Bsp19I	CCATGG	1 cut(s)	395
BspACI	CCGC	8 cut(s)	198, 1156, 1158, 1233, 1328, 1354, 1356, 1877
BspCNI	CTCAG	1 cut(s)	430
BspEI	TCCGGA	1 cut(s)	1382
BspFNI	CGCG	3 cut(s)	1103, 1158, 1356
BspHI	TCATGA	2 cut(s)	331, 703
BspPI	GGATC	5 cut(s)	600, 941, 1353, 1366, 1393
BspT107I	GGYRCC	4 cut(s)	995, 1135, 1616, 1879
BspTNI	GGTCTC	2 cut(s)	831, 1185
BsrDI	GCAATG	5 cut(s)	424, 1041, 1578, 1875, 1974
BsrFI	RCCGGY	3 cut(s)	1518, 1613, 1774
BsrGI	TGTACA	1 cut(s)	1014
BsrI	ACTGG	6 cut(s)	196, 693, 749, 969, 1422, 1824
BssAI	RCCGGY	3 cut(s)	1518, 1613, 1774
BssECI	CCNNGG	8 cut(s)	25, 395, 999, 1000, 1149, 1156, 1254, 1354
BssMI	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
BssNI	GRCGYC	2 cut(s)	1617, 1880
BssSI	CACGAG	3 cut(s)	13, 1241, 1571
BssT1I	CCWWGG	2 cut(s)	395, 1254
Bst2BI	CACGAG	3 cut(s)	13, 1241, 1571
Bst2UI	CCWGG	2 cut(s)	26, 1151
Bst4CI	ACNGT	3 cut(s)	66, 1214, 1841
Bst6I	CTCTTC	1 cut(s)	215
BstACI	GRCGYC	2 cut(s)	1617, 1880
BstAPI	GCANNNNNTGC	1 cut(s)	1074
BstAUI	TGTACA	1 cut(s)	1014
BstDEI	CTNAG	2 cut(s)	438, 1937
BstDSI	CCRYGG	3 cut(s)	395, 1156, 1354
BstF5I	GGATG	2 cut(s)	1323, 1523
BstFNI	CGCG	3 cut(s)	1103, 1158, 1356
BstH2I	RGCGCY	4 cut(s)	361, 1620, 1775, 1883
BstHHI	GCGC	5 cut(s)	360, 1148, 1619, 1774, 1882
BstKTI	GATC	6 cut(s)	595, 673, 949, 987, 1361, 1388
BstMAI	GTCTC	4 cut(s)	255, 831, 1185, 1680
BstMBI	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
BstMCI	CGRYCG	1 cut(s)	1176
BstNI	CCWGG	2 cut(s)	26, 1151
BstNSI	RCATGY	1 cut(s)	275
BstSCI	CCNGG	9 cut(s)	24, 567, 999, 1000, 1070, 1149, 1170, 1175, 1445
BstSLI	GKGCMC	6 cut(s)	457, 998, 1070, 1140, 1466, 1578
BstUI	CGCG	3 cut(s)	1103, 1158, 1356
BstV1I	GCAGC	5 cut(s)	766, 796, 1886, 1936, 1939
BstV2I	GAAGAC	1 cut(s)	797
BstX2I	RGATCY	1 cut(s)	1358
BstXI	CCANNNNNNTGG	2 cut(s)	262, 468
BstYI	RGATCY	1 cut(s)	1358
BstZI	CGGCCG	1 cut(s)	1173
Bsu36I	CCTNAGG	1 cut(s)	1937
BsuI	GTATCC	2 cut(s)	259, 335
BtgI	CCRYGG	3 cut(s)	395, 1156, 1354
BtsCI	GGATG	2 cut(s)	1323, 1523
BtsI	GCAGTG	1 cut(s)	765
BtsIMutI	CAGTG	2 cut(s)	765, 1817
CaiI	CAGNNNCTG	1 cut(s)	806
CciI	TCATGA	2 cut(s)	331, 703
CfoI	GCGC	5 cut(s)	360, 1148, 1619, 1774, 1882
Cfr10I	RCCGGY	3 cut(s)	1518, 1613, 1774
Cfr42I	CCGCGG	2 cut(s)	1159, 1357
Cfr9I	CCCGGG	1 cut(s)	1000
CseI	GACGC	3 cut(s)	1092, 1546, 1861
Csp6I	GTAC	3 cut(s)	189, 1015, 1210
CviQI	GTAC	3 cut(s)	189, 1015, 1210
DdeI	CTNAG	2 cut(s)	438, 1937
DinI	GGCGCC	2 cut(s)	1618, 1881
DpnI	GATC	6 cut(s)	594, 672, 948, 986, 1360, 1387
DpnII	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
DraIII	CACNNNGTG	1 cut(s)	1074
EaeI	YGGCCR	5 cut(s)	565, 1173, 1471, 1520, 1776
EagI	CGGCCG	1 cut(s)	1173
Eam1104I	CTCTTC	1 cut(s)	215
EarI	CTCTTC	1 cut(s)	215
EciI	GGCGGA	2 cut(s)	213, 1222
EclXI	CGGCCG	1 cut(s)	1173
Eco130I	CCWWGG	2 cut(s)	395, 1254
Eco24I	GRGCYC	2 cut(s)	1164, 1466
Eco31I	GGTCTC	2 cut(s)	831, 1185
Eco47I	GGWCC	6 cut(s)	380, 716, 1021, 1051, 1449, 1567
Eco52I	CGGCCG	1 cut(s)	1173
Eco57I	CTGAAG	2 cut(s)	173, 309
Eco81I	CCTNAGG	1 cut(s)	1937
Eco88I	CYCGRG	4 cut(s)	1000, 1060, 1396, 1846
EcoO109I	RGGNCCY	5 cut(s)	716, 1051, 1449, 1463, 1567
EcoRII	CCWGG	2 cut(s)	24, 1149
EcoT14I	CCWWGG	2 cut(s)	395, 1254
EcoT22I	ATGCAT	1 cut(s)	940
EcoT38I	GRGCYC	2 cut(s)	1164, 1466
EgeI	GGCGCC	2 cut(s)	1618, 1881
EheI	GGCGCC	2 cut(s)	1618, 1881
ErhI	CCWWGG	2 cut(s)	395, 1254
Esp3I	CGTCTC	1 cut(s)	1680
FalI	AAGNNNNNCTT	2 cut(s)	335, 367
FaqI	GGGAC	4 cut(s)	366, 1037, 1435, 1864
FauI	CCCGC	3 cut(s)	1151, 1163, 1335
FbaI	TGATCA	1 cut(s)	670
FblI	GTMKAC	1 cut(s)	1671
Fnu4HI	GCNGC	8 cut(s)	8, 780, 810, 1354, 1875, 1878, 1925, 1928
FokI	GGATG	2 cut(s)	1310, 1510
FriOI	GRGCYC	2 cut(s)	1164, 1466
Fsp4HI	GCNGC	8 cut(s)	8, 780, 810, 1354, 1875, 1878, 1925, 1928
FspBI	CTAG	1 cut(s)	1595
GlaI	GCGC	5 cut(s)	359, 1147, 1618, 1773, 1881
GluI	GCNGC	8 cut(s)	8, 780, 810, 1354, 1875, 1878, 1925, 1928
GsaI	CCCAGC	1 cut(s)	1463
GsuI	CTGGAG	3 cut(s)	213, 1335, 1841
HaeII	RGCGCY	4 cut(s)	361, 1620, 1775, 1883
HgaI	GACGC	3 cut(s)	1092, 1546, 1861
HhaI	GCGC	5 cut(s)	360, 1148, 1619, 1774, 1882
Hin1I	GRCGYC	2 cut(s)	1617, 1880
Hin6I	GCGC	5 cut(s)	358, 1146, 1617, 1772, 1880
HinP1I	GCGC	5 cut(s)	358, 1146, 1617, 1772, 1880
HincII	GTYRAC	2 cut(s)	178, 1540
HindII	GTYRAC	2 cut(s)	178, 1540
HindIII	AAGCTT	2 cut(s)	291, 928
HinfI	GANTC	6 cut(s)	221, 1551, 1634, 1656, 1834, 1942
HpaI	GTTAAC	1 cut(s)	178
HphI	GGTGA	3 cut(s)	230, 1537, 1642
Hpy166II	GTNNAC	9 cut(s)	178, 455, 1068, 1107, 1418, 1540, 1672, 1708, 1894
Hpy188III	TCNNGA	8 cut(s)	86, 332, 704, 923, 982, 1314, 1383, 1398
Hpy8I	GTNNAC	9 cut(s)	178, 455, 1068, 1107, 1418, 1540, 1672, 1708, 1894
Hpy99I	CGWCG	2 cut(s)	188, 1562
HpyAV	CCTTC	2 cut(s)	444, 1757
HpyCH4III	ACNGT	3 cut(s)	66, 1214, 1841
HpyCH4IV	ACGT	2 cut(s)	1536, 1784
HpyF3I	CTNAG	2 cut(s)	438, 1937
HpySE526I	ACGT	2 cut(s)	1536, 1784
Hsp92I	GRCGYC	2 cut(s)	1617, 1880
HspAI	GCGC	5 cut(s)	358, 1146, 1617, 1772, 1880
KasI	GGCGCC	2 cut(s)	1616, 1879
KflI	GGGWCCC	2 cut(s)	1051, 1449
Kpn2I	TCCGGA	1 cut(s)	1382
KroI	GCCGGC	2 cut(s)	1518, 1774
KroNI	GCCGGC	2 cut(s)	1520, 1776
Ksp22I	TGATCA	1 cut(s)	670
KspAI	GTTAAC	1 cut(s)	178
KspI	CCGCGG	2 cut(s)	1159, 1357
Kzo9I	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
LmnI	GCTCC	3 cut(s)	365, 641, 1082
Lsp1109I	GCAGC	5 cut(s)	766, 796, 1886, 1936, 1939
LweI	GCATC	4 cut(s)	64, 947, 1240, 1308
MaeI	CTAG	1 cut(s)	1595
MaeII	ACGT	2 cut(s)	1536, 1784
MaeIII	GTNAC	1 cut(s)	971
MalI	GATC	6 cut(s)	594, 672, 948, 986, 1360, 1387
MboI	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
MboII	GAAGA	4 cut(s)	202, 644, 802, 933
MflI	RGATCY	1 cut(s)	1358
MluI	ACGCGT	1 cut(s)	1101
Mly113I	GGCGCC	2 cut(s)	1617, 1880
MlyI	GAGTC	1 cut(s)	1628
MmeI	TCCRAC	2 cut(s)	119, 1104
Mph1103I	ATGCAT	1 cut(s)	940
MroI	TCCGGA	1 cut(s)	1382
MroNI	GCCGGC	2 cut(s)	1518, 1774
MroXI	GAANNNNTTC	1 cut(s)	482
MseI	TTAA	5 cut(s)	177, 611, 773, 1200, 1996
MslI	CAYNNNNRTG	2 cut(s)	336, 1016
MspA1I	CMGCKG	3 cut(s)	1158, 1356, 1877
MspR9I	CCNGG	9 cut(s)	26, 569, 1001, 1002, 1072, 1151, 1172, 1177, 1447
Mva1269I	GAATGC	2 cut(s)	1148, 1733
MvaI	CCWGG	2 cut(s)	26, 1151
MvnI	CGCG	3 cut(s)	1103, 1158, 1356
NaeI	GCCGGC	2 cut(s)	1520, 1776
NarI	GGCGCC	2 cut(s)	1617, 1880
NciI	CCSGG	7 cut(s)	569, 1001, 1002, 1072, 1172, 1177, 1447
NcoI	CCATGG	1 cut(s)	395
NdeII	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
NgoMIV	GCCGGC	2 cut(s)	1518, 1774
NsiI	ATGCAT	1 cut(s)	940
NspI	RCATGY	1 cut(s)	275
PagI	TCATGA	2 cut(s)	331, 703
PciI	ACATGT	1 cut(s)	271
PcsI	WCGNNNNNNNCGW	3 cut(s)	592, 1100, 1665
PctI	GAATGC	2 cut(s)	1148, 1733
PdiI	GCCGGC	2 cut(s)	1520, 1776
PdmI	GAANNNNTTC	1 cut(s)	482
PfeI	GAWTC	5 cut(s)	221, 1551, 1656, 1834, 1942
Pfl23II	CGTACG	1 cut(s)	1209
PflMI	CCANNNNNTGG	2 cut(s)	31, 662
PkrI	GCNGC	8 cut(s)	9, 781, 811, 1355, 1876, 1879, 1926, 1929
PleI	GAGTC	1 cut(s)	1628
PluTI	GGCGCC	2 cut(s)	1620, 1883
PpsI	GAGTC	1 cut(s)	1628
PpuMI	RGGWCCY	4 cut(s)	716, 1051, 1449, 1567
PscI	ACATGT	1 cut(s)	271
Psp5II	RGGWCCY	4 cut(s)	716, 1051, 1449, 1567
Psp6I	CCWGG	2 cut(s)	24, 1149
PspFI	CCCAGC	1 cut(s)	1459
PspGI	CCWGG	2 cut(s)	24, 1149
PspLI	CGTACG	1 cut(s)	1209
PspOMI	GGGCCC	1 cut(s)	1462
PspPPI	RGGWCCY	4 cut(s)	716, 1051, 1449, 1567
PstNI	CAGNNNCTG	1 cut(s)	806
PsuI	RGATCY	1 cut(s)	1358
RsaI	GTAC	3 cut(s)	190, 1016, 1211
RsaNI	GTAC	3 cut(s)	189, 1015, 1210
RseI	CAYNNNNRTG	2 cut(s)	336, 1016
SacII	CCGCGG	2 cut(s)	1159, 1357
SaqAI	TTAA	5 cut(s)	177, 611, 773, 1200, 1996
SatI	GCNGC	8 cut(s)	8, 780, 810, 1354, 1875, 1878, 1925, 1928
Sau3AI	GATC	6 cut(s)	592, 670, 946, 984, 1358, 1385
SchI	GAGTC	1 cut(s)	1628
ScrFI	CCNGG	9 cut(s)	26, 569, 1001, 1002, 1072, 1151, 1172, 1177, 1447
SfaNI	GCATC	4 cut(s)	64, 947, 1240, 1308
SfiI	GGCCNNNNNGGCC	1 cut(s)	1470
SfoI	GGCGCC	2 cut(s)	1618, 1881
Sfr303I	CCGCGG	2 cut(s)	1159, 1357
SgrAI	CRCCGGYG	1 cut(s)	1613
SgrBI	CCGCGG	2 cut(s)	1159, 1357
SinI	GGWCC	6 cut(s)	380, 716, 1021, 1051, 1449, 1567
SmaI	CCCGGG	1 cut(s)	1002
SmiMI	CAYNNNNRTG	2 cut(s)	336, 1016
SsiI	CCGC	8 cut(s)	198, 1156, 1158, 1233, 1328, 1354, 1356, 1877
SspDI	GGCGCC	2 cut(s)	1616, 1879
SspI	AATATT	1 cut(s)	238
SspMI	CTAG	1 cut(s)	1595
StyD4I	CCNGG	9 cut(s)	24, 567, 999, 1000, 1070, 1149, 1170, 1175, 1445
StyI	CCWWGG	2 cut(s)	395, 1254
TaaI	ACNGT	3 cut(s)	66, 1214, 1841
TaiI	ACGT	2 cut(s)	1539, 1787
TaqI	TCGA	3 cut(s)	595, 1721, 1737
TatI	WGTACW	1 cut(s)	1014
TauI	GCSGC	2 cut(s)	1356, 1880
TfiI	GAWTC	5 cut(s)	221, 1551, 1656, 1834, 1942
Tru1I	TTAA	5 cut(s)	177, 611, 773, 1200, 1996
Tru9I	TTAA	5 cut(s)	177, 611, 773, 1200, 1996
TscAI	CASTG	2 cut(s)	772, 1824
TseI	GCWGC	6 cut(s)	7, 779, 809, 1874, 1924, 1927
TspDTI	ATGAA	5 cut(s)	348, 475, 484, 491, 720
TspGWI	ACGGA	1 cut(s)	548
TspMI	CCCGGG	1 cut(s)	1000
TspRI	CASTG	2 cut(s)	772, 1824
Van91I	CCANNNNNTGG	2 cut(s)	31, 662
VneI	GTGCAC	2 cut(s)	453, 1066
VpaK11BI	GGWCC	6 cut(s)	380, 716, 1021, 1051, 1449, 1567
XapI	RAATTY	2 cut(s)	478, 832
XceI	RCATGY	1 cut(s)	275
XcmI	CCANNNNNNNNNTGG	4 cut(s)	465, 543, 1211, 1966
XmaI	CCCGGG	1 cut(s)	1000
XmiI	GTMKAC	1 cut(s)	1671
XmnI	GAANNNNTTC	1 cut(s)	482
XspI	CTAG	1 cut(s)	1595
Zsp2I	ATGCAT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.