Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0015007

Physical Location & Seq

Genomic Coordinates Reverse (-)

9779491 .. 9780801

Gene Structure 1311 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001048

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGACTCAAAGATTGCTTGCTTTCTCTTCTTTGCTCTTCTAATCTCTCTCACCAAAGCTGTTGATCCTTGTGCTTCCCAAAGCTATGGCTCAGGTGACCTCTCCATAATTCCAACCTATAGCAAATGCTCTCCCTTAACTTCACCCAAGACCGACTCGTTCAACACAGTCCTAAACATGGCCTCCAGAGACCCGGAGCGGTTCAAGTACTTGTCATCCCTAGTGGCCCAAAAGACCACTTTGGCTCCGATTGCTTCGGGCCAACAGGTCCTAAACATTCCCAGCTACATAGTCCAGATCAAATTGGGCACCCCGGGCCAGCTCATGTACATGGTCCTCGACTCAAGCAACGACATTGCATGGGTCCCATGCTCGGGGTGCACCGGGTGCTCCTCCACCACATTCTCGCCCAACACGTCCACAACTTACGGGCAGTTGGACTGCTCGGTGCCTGAATGCGCCCAGGCTCGTGGGCTCTCGTGTCCGGCCGGGTCTCCAGTCGGGTGCTCATTTAACCAATCGTACGGTGGAGGCTCGTCATTTTCCGCCTCACTTGTGCAAGATGCCTTGGGATTAGGAAAAGATGTCATTCCGAAATACTCTTTCGGGTGCATCAATTCCATCTCTGGCGGGAACATCCCGCCACAGGGGCTATTGGGCTTGGGCCGCGGATCCATGTCGTTGCTCTCGCAATCCGGATCGCTCTACAAGGGAGTGTTCTCATATTGTTTACCCAGTTTCAAATCTTACTACTTTTCTGGGTCCCTCAAGCTGGGTCCTGTCGGCCAGCCCAAGTCCATCAGAACCACCCCACTTCTCACAAACCCTCGCCGGCCATCCTTGTATTACGTCAACCTCACCGGAATCAGCGTCGGCAAGGTCCTCGTGCCTGTTGCCCCACAATTCCTAGCCTTTGACCCGACCACCGGCGCCGGAACCATCATAGACTCCGGCACAACAATCACCCGATTCGTGCCACCCGTCTACAACGCAATCCGAGACGAGTTCAGAAAACAAGTGAACACCACATTTTCGAGTTTGGGGGCATTCGACACTTGCTTCAACACCAACAACGAAGGCGTAGCGCCGGCCATTACTTTTCGTTTCACAGGCTTGGTGTTGACGTTGCCACTGGAGAACAGCTTGATTCACAGTAGCTCGGGGACGCTGGCTTGCTTGGCAATGGCAGCGGCGCCCAATAATGTGAACTCGGTGCTGAATGTGATAGCCAACTTGCAGCAGCAGAACCTTAGAATTCTGTTTGATGTGGCCAACTCTCGGTTGGGCATTGCCCGTGAGCTTTGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009505 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0010941 GO:0016787 GO:0019538 GO:0030163 GO:0030312 GO:0043067 GO:0043170 GO:0043207 GO:0044238 GO:0044464 GO:0045087 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

437

Amino Acids

46.09

Weight (kDa)

8.75

Isoelectric Point (pI)

44.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	96 - 259	1e-30	Xylanase inhibitor N-terminal
Asp	PF00026	168 - 432	2e-10	Eukaryotic aspartyl protease
TAXi_C	PF14541	282 - 431	8.6e-29	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09750
fragaria_vesca	FvH4_5g35540
malus_domestica	MD08G1195800.v1.1 MD15G1383700.v1.1
prunus_persica	Prupe.1G529800_v2.0.a1
pyrus_communis	pycom08g16820 pycom15g34330
rosa_chinensis	RchiOBHm_Chr7g0236921
rosa_laevigata	RLG00000001048
rosa_roxburghii	Rroxscaffold_3G00224690
rosa_rugosa	Rorug07G0301000
rosa_samantha	Rh7AG455900 Rh7BG427200 Rh7CG474700 Rh7DG443800
rosa_wichuraiana	Rw7G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	308, 448, 929, 1192
AccBSI	CCGCTC	1 cut(s)	199
AccI	GTMKAC	1 cut(s)	984
AccII	CGCG	1 cut(s)	669
AccIII	TCCGGA	1 cut(s)	695
AciI	CCGC	7 cut(s)	199, 546, 630, 641, 667, 669, 1190
AclWI	GGATC	4 cut(s)	59, 666, 679, 706
AcoI	YGGCCR	5 cut(s)	486, 784, 833, 1089, 1269
AcsI	RAATTY	1 cut(s)	1254
AcyI	GRCGYC	2 cut(s)	930, 1193
AdeI	CACNNNGTG	1 cut(s)	387
AfaI	GTAC	3 cut(s)	209, 329, 524
AfiI	CCNNNNNNNGG	8 cut(s)	178, 373, 374, 646, 647, 772, 926, 1278
AflIII	ACRYGT	1 cut(s)	414
AgsI	TTSAA	4 cut(s)	163, 205, 742, 1063
AjiI	CACGTC	1 cut(s)	417
AjnI	CCWGG	1 cut(s)	462
AluBI	AGCT	8 cut(s)	59, 84, 285, 322, 772, 1143, 1158, 1300
AluI	AGCT	8 cut(s)	59, 84, 285, 322, 772, 1143, 1158, 1300
Alw21I	GWGCWC	3 cut(s)	383, 392, 509
Alw26I	GTCTC	3 cut(s)	183, 498, 993
Alw44I	GTGCAC	1 cut(s)	379
AlwI	GGATC	4 cut(s)	59, 666, 679, 706
Ama87I	CYCGRG	3 cut(s)	313, 373, 1159
Aor13HI	TCCGGA	1 cut(s)	695
ApaLI	GTGCAC	1 cut(s)	379
ApeKI	GCWGC	3 cut(s)	1187, 1237, 1240
ApoI	RAATTY	1 cut(s)	1254
AspLEI	GCGC	4 cut(s)	461, 932, 1087, 1195
AsuC2I	CCSGG	5 cut(s)	194, 314, 315, 385, 490
AsuHPI	GGTGA	5 cut(s)	43, 107, 135, 850, 955
AvaI	CYCGRG	3 cut(s)	313, 373, 1159
AvaII	GGWCC	6 cut(s)	268, 334, 364, 762, 776, 880
BaeGI	GKGCMC	2 cut(s)	311, 383
BalI	TGGCCA	1 cut(s)	1271
BamHI	GGATCC	1 cut(s)	671
BanI	GGYRCC	4 cut(s)	308, 448, 929, 1192
BanII	GRGCYC	1 cut(s)	477
BauI	CACGAG	3 cut(s)	468, 478, 884
Bbv12I	GWGCWC	3 cut(s)	383, 392, 509
BbvI	GCAGC	3 cut(s)	1199, 1249, 1252
BccI	CCATC	4 cut(s)	629, 806, 844, 947
BcgI	CGANNNNNNTGC	2 cut(s)	865, 899
BciT130I	CCWGG	1 cut(s)	464
BcnI	CCSGG	5 cut(s)	194, 314, 315, 385, 490
BcoDI	GTCTC	3 cut(s)	183, 498, 993
BfaI	CTAG	2 cut(s)	221, 908
BfmI	CTRYAG	1 cut(s)	118
BfoI	RGCGCY	3 cut(s)	933, 1088, 1196
BglI	GCCNNNNNGGC	1 cut(s)	649
BisI	GCNGC	5 cut(s)	667, 1188, 1191, 1238, 1241
BlsI	GCNGC	5 cut(s)	668, 1189, 1192, 1239, 1242
BmcAI	AGTACT	1 cut(s)	209
Bme1390I	CCNGG	6 cut(s)	194, 314, 315, 385, 464, 490
Bme18I	GGWCC	6 cut(s)	268, 334, 364, 762, 776, 880
BmeT110I	CYCGRG	3 cut(s)	313, 373, 1159
BmgBI	CACGTC	1 cut(s)	417
BmrFI	CCNGG	6 cut(s)	194, 314, 315, 385, 464, 490
BmrI	ACTGGG	1 cut(s)	729
BmsI	GCATC	2 cut(s)	553, 621
BmuI	ACTGGG	1 cut(s)	729
BpmI	CTGGAG	3 cut(s)	169, 480, 1154
Bpu10I	CCTNAGC	1 cut(s)	91
BpuEI	CTTGAG	2 cut(s)	328, 752
BpuMI	CCSGG	5 cut(s)	194, 314, 315, 385, 490
BsaHI	GRCGYC	2 cut(s)	930, 1193
BsaI	GGTCTC	2 cut(s)	183, 498
BsaJI	CCNNGG	5 cut(s)	312, 313, 462, 567, 667
BsaWI	WCCGGW	2 cut(s)	695, 860
BsaXI	ACNNNNNCTCC	4 cut(s)	167, 197, 229, 259
Bsc4I	CCNNNNNNNGG	8 cut(s)	178, 373, 374, 646, 647, 772, 926, 1278
Bse118I	RCCGGY	3 cut(s)	831, 926, 1087
Bse1I	ACTGG	3 cut(s)	497, 735, 1137
Bse3DI	GCAATG	3 cut(s)	354, 1188, 1287
BseAI	TCCGGA	1 cut(s)	695
BseBI	CCWGG	1 cut(s)	464
BseDI	CCNNGG	5 cut(s)	312, 313, 462, 567, 667
BseGI	GGATG	3 cut(s)	215, 636, 836
BseLI	CCNNNNNNNGG	8 cut(s)	178, 373, 374, 646, 647, 772, 926, 1278
BseMI	GCAATG	3 cut(s)	354, 1188, 1287
BseMII	CTCAG	1 cut(s)	105
BseNI	ACTGG	3 cut(s)	497, 735, 1137
BseRI	GAGGAG	1 cut(s)	382
BseSI	GKGCMC	2 cut(s)	311, 383
BseX3I	CGGCCG	1 cut(s)	486
BseXI	GCAGC	3 cut(s)	1199, 1249, 1252
BseYI	CCCAGC	2 cut(s)	281, 772
Bsh1236I	CGCG	1 cut(s)	669
Bsh1285I	CGRYCG	1 cut(s)	489
BshNI	GGYRCC	4 cut(s)	308, 448, 929, 1192
BsiEI	CGRYCG	1 cut(s)	489
BsiHKAI	GWGCWC	3 cut(s)	383, 392, 509
BsiHKCI	CYCGRG	3 cut(s)	313, 373, 1159
BsiWI	CGTACG	1 cut(s)	522
BslFI	GGGAC	3 cut(s)	350, 748, 1177
BslI	CCNNNNNNNGG	8 cut(s)	178, 373, 374, 646, 647, 772, 926, 1278
BsmAI	GTCTC	3 cut(s)	183, 498, 993
BsmBI	CGTCTC	1 cut(s)	993
BsmFI	GGGAC	3 cut(s)	350, 748, 1177
BsmI	GAATGC	2 cut(s)	461, 1046
Bso31I	GGTCTC	2 cut(s)	183, 498
BsoBI	CYCGRG	3 cut(s)	313, 373, 1159
Bsp1286I	GDGCHC	5 cut(s)	311, 383, 392, 477, 509
Bsp13I	TCCGGA	1 cut(s)	695
Bsp1407I	TGTACA	1 cut(s)	327
Bsp143I	GATC	4 cut(s)	64, 297, 671, 698
BspACI	CCGC	7 cut(s)	199, 546, 630, 641, 667, 669, 1190
BspCNI	CTCAG	1 cut(s)	104
BspEI	TCCGGA	1 cut(s)	695
BspFNI	CGCG	1 cut(s)	669
BspPI	GGATC	4 cut(s)	59, 666, 679, 706
BspQI	GCTCTTC	1 cut(s)	42
BspT107I	GGYRCC	4 cut(s)	308, 448, 929, 1192
BspTNI	GGTCTC	2 cut(s)	183, 498
BsrBI	CCGCTC	1 cut(s)	199
BsrDI	GCAATG	3 cut(s)	354, 1188, 1287
BsrFI	RCCGGY	3 cut(s)	831, 926, 1087
BsrGI	TGTACA	1 cut(s)	327
BsrI	ACTGG	3 cut(s)	497, 735, 1137
BssAI	RCCGGY	3 cut(s)	831, 926, 1087
BssECI	CCNNGG	5 cut(s)	312, 313, 462, 567, 667
BssMI	GATC	4 cut(s)	64, 297, 671, 698
BssNI	GRCGYC	2 cut(s)	930, 1193
BssSI	CACGAG	3 cut(s)	468, 478, 884
BssT1I	CCWWGG	1 cut(s)	567
Bst2BI	CACGAG	3 cut(s)	468, 478, 884
Bst2UI	CCWGG	1 cut(s)	464
Bst4CI	ACNGT	3 cut(s)	169, 527, 1154
Bst6I	CTCTTC	2 cut(s)	32, 42
BstACI	GRCGYC	2 cut(s)	930, 1193
BstAPI	GCANNNNNTGC	1 cut(s)	387
BstAUI	TGTACA	1 cut(s)	327
BstC8I	GCNNGC	7 cut(s)	19, 320, 788, 833, 1089, 1170, 1174
BstDEI	CTNAG	2 cut(s)	91, 1250
BstDSI	CCRYGG	1 cut(s)	667
BstEII	GGTNACC	1 cut(s)	95
BstF5I	GGATG	3 cut(s)	215, 636, 836
BstFNI	CGCG	1 cut(s)	669
BstH2I	RGCGCY	3 cut(s)	933, 1088, 1196
BstHHI	GCGC	4 cut(s)	461, 932, 1087, 1195
BstKTI	GATC	4 cut(s)	67, 300, 674, 701
BstMAI	GTCTC	3 cut(s)	183, 498, 993
BstMBI	GATC	4 cut(s)	64, 297, 671, 698
BstMCI	CGRYCG	1 cut(s)	489
BstMWI	GCNNNNNNNGC	8 cut(s)	251, 315, 378, 387, 649, 666, 1178, 1187
BstNI	CCWGG	1 cut(s)	464
BstPI	GGTNACC	1 cut(s)	95
BstSCI	CCNGG	6 cut(s)	192, 312, 313, 383, 462, 488
BstSFI	CTRYAG	1 cut(s)	118
BstSLI	GKGCMC	2 cut(s)	311, 383
BstUI	CGCG	1 cut(s)	669
BstV1I	GCAGC	3 cut(s)	1199, 1249, 1252
BstX2I	RGATCY	1 cut(s)	671
BstXI	CCANNNNNNTGG	2 cut(s)	86, 470
BstYI	RGATCY	1 cut(s)	671
BstZI	CGGCCG	1 cut(s)	486
BtgI	CCRYGG	1 cut(s)	667
BtrI	CACGTC	1 cut(s)	417
BtsCI	GGATG	3 cut(s)	215, 636, 836
BtsIMutI	CAGTG	1 cut(s)	1130
Cac8I	GCNNGC	7 cut(s)	19, 320, 788, 833, 1089, 1170, 1174
CfoI	GCGC	4 cut(s)	461, 932, 1087, 1195
Cfr10I	RCCGGY	3 cut(s)	831, 926, 1087
Cfr42I	CCGCGG	1 cut(s)	670
Cfr9I	CCCGGG	1 cut(s)	313
CseI	GACGC	2 cut(s)	859, 1174
Csp6I	GTAC	3 cut(s)	208, 328, 523
CviAII	CATG	6 cut(s)	178, 325, 331, 360, 369, 676
CviQI	GTAC	3 cut(s)	208, 328, 523
DdeI	CTNAG	2 cut(s)	91, 1250
DinI	GGCGCC	2 cut(s)	931, 1194
DpnI	GATC	4 cut(s)	66, 299, 673, 700
DpnII	GATC	4 cut(s)	64, 297, 671, 698
DraIII	CACNNNGTG	1 cut(s)	387
EaeI	YGGCCR	5 cut(s)	486, 784, 833, 1089, 1269
EagI	CGGCCG	1 cut(s)	486
Eam1104I	CTCTTC	2 cut(s)	32, 42
EarI	CTCTTC	2 cut(s)	32, 42
EciI	GGCGGA	1 cut(s)	535
EclXI	CGGCCG	1 cut(s)	486
Eco130I	CCWWGG	1 cut(s)	567
Eco24I	GRGCYC	1 cut(s)	477
Eco31I	GGTCTC	2 cut(s)	183, 498
Eco47I	GGWCC	6 cut(s)	268, 334, 364, 762, 776, 880
Eco52I	CGGCCG	1 cut(s)	486
Eco88I	CYCGRG	3 cut(s)	313, 373, 1159
Eco91I	GGTNACC	1 cut(s)	95
EcoO109I	RGGNCCY	5 cut(s)	268, 364, 762, 776, 880
EcoO65I	GGTNACC	1 cut(s)	95
EcoRI	GAATTC	1 cut(s)	1254
EcoRII	CCWGG	1 cut(s)	462
EcoT14I	CCWWGG	1 cut(s)	567
EcoT38I	GRGCYC	1 cut(s)	477
EgeI	GGCGCC	2 cut(s)	931, 1194
EheI	GGCGCC	2 cut(s)	931, 1194
ErhI	CCWWGG	1 cut(s)	567
Esp3I	CGTCTC	1 cut(s)	993
FaeI	CATG	6 cut(s)	181, 328, 334, 363, 372, 679
FaqI	GGGAC	3 cut(s)	350, 748, 1177
FatI	CATG	6 cut(s)	177, 324, 330, 359, 368, 675
FauI	CCCGC	2 cut(s)	623, 648
FblI	GTMKAC	1 cut(s)	984
Fnu4HI	GCNGC	5 cut(s)	667, 1188, 1191, 1238, 1241
FokI	GGATG	3 cut(s)	202, 623, 823
FriOI	GRGCYC	1 cut(s)	477
Fsp4HI	GCNGC	5 cut(s)	667, 1188, 1191, 1238, 1241
FspBI	CTAG	2 cut(s)	221, 908
GlaI	GCGC	4 cut(s)	460, 931, 1086, 1194
GluI	GCNGC	5 cut(s)	667, 1188, 1191, 1238, 1241
GsaI	CCCAGC	2 cut(s)	285, 776
GsuI	CTGGAG	3 cut(s)	169, 480, 1154
HaeII	RGCGCY	3 cut(s)	933, 1088, 1196
HgaI	GACGC	2 cut(s)	859, 1174
HhaI	GCGC	4 cut(s)	461, 932, 1087, 1195
Hin1I	GRCGYC	2 cut(s)	930, 1193
Hin1II	CATG	6 cut(s)	181, 328, 334, 363, 372, 679
Hin6I	GCGC	4 cut(s)	459, 930, 1085, 1193
HinP1I	GCGC	4 cut(s)	459, 930, 1085, 1193
HincII	GTYRAC	2 cut(s)	853, 1122
HindII	GTYRAC	2 cut(s)	853, 1122
HinfI	GANTC	7 cut(s)	5, 155, 341, 864, 947, 969, 1147
HphI	GGTGA	5 cut(s)	43, 107, 135, 850, 955
Hpy166II	GTNNAC	8 cut(s)	381, 420, 731, 853, 985, 1021, 1122, 1207
Hpy188I	TCNGA	5 cut(s)	249, 594, 803, 998, 1010
Hpy188III	TCNNGA	3 cut(s)	186, 295, 696
Hpy8I	GTNNAC	8 cut(s)	381, 420, 731, 853, 985, 1021, 1122, 1207
Hpy99I	CGWCG	1 cut(s)	875
HpyAV	CCTTC	1 cut(s)	1070
HpyCH4III	ACNGT	3 cut(s)	169, 527, 1154
HpyCH4IV	ACGT	3 cut(s)	416, 849, 1124
HpyCH4V	TGCA	5 cut(s)	359, 381, 559, 612, 1237
HpyF10VI	GCNNNNNNNGC	8 cut(s)	251, 315, 378, 387, 649, 666, 1178, 1187
HpyF3I	CTNAG	2 cut(s)	91, 1250
HpySE526I	ACGT	3 cut(s)	416, 849, 1124
Hsp92I	GRCGYC	2 cut(s)	930, 1193
Hsp92II	CATG	6 cut(s)	181, 328, 334, 363, 372, 679
HspAI	GCGC	4 cut(s)	459, 930, 1085, 1193
KasI	GGCGCC	2 cut(s)	929, 1192
KflI	GGGWCCC	2 cut(s)	364, 762
Kpn2I	TCCGGA	1 cut(s)	695
KroI	GCCGGC	2 cut(s)	831, 1087
KroNI	GCCGGC	2 cut(s)	833, 1089
KspI	CCGCGG	1 cut(s)	670
Kzo9I	GATC	4 cut(s)	64, 297, 671, 698
LguI	GCTCTTC	1 cut(s)	42
LmnI	GCTCC	3 cut(s)	196, 250, 395
Lsp1109I	GCAGC	3 cut(s)	1199, 1249, 1252
LweI	GCATC	2 cut(s)	553, 621
MaeI	CTAG	2 cut(s)	221, 908
MaeII	ACGT	3 cut(s)	416, 849, 1124
MaeIII	GTNAC	1 cut(s)	95
MalI	GATC	4 cut(s)	66, 299, 673, 700
MbiI	CCGCTC	1 cut(s)	199
MboI	GATC	4 cut(s)	64, 297, 671, 698
MboII	GAAGA	2 cut(s)	19, 29
MflI	RGATCY	1 cut(s)	671
MhlI	GDGCHC	5 cut(s)	311, 383, 392, 477, 509
MlsI	TGGCCA	1 cut(s)	1271
MluCI	AATT	6 cut(s)	108, 302, 616, 902, 1254, 1306
MluNI	TGGCCA	1 cut(s)	1271
Mly113I	GGCGCC	2 cut(s)	930, 1193
MlyI	GAGTC	3 cut(s)	149, 335, 941
MmeI	TCCRAC	2 cut(s)	137, 417
Mox20I	TGGCCA	1 cut(s)	1271
MroI	TCCGGA	1 cut(s)	695
MroNI	GCCGGC	2 cut(s)	831, 1087
MscI	TGGCCA	1 cut(s)	1271
MseI	TTAA	3 cut(s)	137, 513, 1309
MslI	CAYNNNNRTG	1 cut(s)	329
Msp20I	TGGCCA	1 cut(s)	1271
MspA1I	CMGCKG	2 cut(s)	669, 1190
MspR9I	CCNGG	6 cut(s)	194, 314, 315, 385, 464, 490
Mva1269I	GAATGC	2 cut(s)	461, 1046
MvaI	CCWGG	1 cut(s)	464
MvnI	CGCG	1 cut(s)	669
MwoI	GCNNNNNNNGC	8 cut(s)	251, 315, 378, 387, 649, 666, 1178, 1187
NaeI	GCCGGC	2 cut(s)	833, 1089
NarI	GGCGCC	2 cut(s)	930, 1193
NciI	CCSGG	5 cut(s)	194, 314, 315, 385, 490
NdeII	GATC	4 cut(s)	64, 297, 671, 698
NgoMIV	GCCGGC	2 cut(s)	831, 1087
NlaIII	CATG	6 cut(s)	181, 328, 334, 363, 372, 679
NmuCI	GTSAC	1 cut(s)	95
PciSI	GCTCTTC	1 cut(s)	42
PcsI	WCGNNNNNNNCGW	2 cut(s)	413, 978
PctI	GAATGC	2 cut(s)	461, 1046
PdiI	GCCGGC	2 cut(s)	833, 1089
PfeI	GAWTC	3 cut(s)	864, 969, 1147
Pfl23II	CGTACG	1 cut(s)	522
PkrI	GCNGC	5 cut(s)	668, 1189, 1192, 1239, 1242
PleI	GAGTC	3 cut(s)	149, 335, 941
PluTI	GGCGCC	2 cut(s)	933, 1196
PpsI	GAGTC	3 cut(s)	149, 335, 941
PpuMI	RGGWCCY	5 cut(s)	268, 364, 762, 776, 880
Psp5II	RGGWCCY	5 cut(s)	268, 364, 762, 776, 880
Psp6I	CCWGG	1 cut(s)	462
PspEI	GGTNACC	1 cut(s)	95
PspFI	CCCAGC	2 cut(s)	281, 772
PspGI	CCWGG	1 cut(s)	462
PspLI	CGTACG	1 cut(s)	522
PspPPI	RGGWCCY	5 cut(s)	268, 364, 762, 776, 880
PsuI	RGATCY	1 cut(s)	671
RsaI	GTAC	3 cut(s)	209, 329, 524
RsaNI	GTAC	3 cut(s)	208, 328, 523
RseI	CAYNNNNRTG	1 cut(s)	329
SacII	CCGCGG	1 cut(s)	670
SapI	GCTCTTC	1 cut(s)	42
SaqAI	TTAA	3 cut(s)	137, 513, 1309
SatI	GCNGC	5 cut(s)	667, 1188, 1191, 1238, 1241
Sau3AI	GATC	4 cut(s)	64, 297, 671, 698
ScaI	AGTACT	1 cut(s)	209
SchI	GAGTC	3 cut(s)	149, 335, 941
ScrFI	CCNGG	6 cut(s)	194, 314, 315, 385, 464, 490
SduI	GDGCHC	5 cut(s)	311, 383, 392, 477, 509
SfaNI	GCATC	2 cut(s)	553, 621
SfcI	CTRYAG	1 cut(s)	118
SfoI	GGCGCC	2 cut(s)	931, 1194
Sfr303I	CCGCGG	1 cut(s)	670
SgrAI	CRCCGGYG	1 cut(s)	926
SgrBI	CCGCGG	1 cut(s)	670
SinI	GGWCC	6 cut(s)	268, 334, 364, 762, 776, 880
SmaI	CCCGGG	1 cut(s)	315
SmiMI	CAYNNNNRTG	1 cut(s)	329
SmlI	CTYRAG	2 cut(s)	343, 767
SmoI	CTYRAG	2 cut(s)	343, 767
Sse9I	AATT	6 cut(s)	108, 302, 616, 902, 1254, 1306
SsiI	CCGC	7 cut(s)	199, 546, 630, 641, 667, 669, 1190
SspDI	GGCGCC	2 cut(s)	929, 1192
SspMI	CTAG	2 cut(s)	221, 908
StyD4I	CCNGG	6 cut(s)	192, 312, 313, 383, 462, 488
StyI	CCWWGG	1 cut(s)	567
TaaI	ACNGT	3 cut(s)	169, 527, 1154
TaiI	ACGT	3 cut(s)	419, 852, 1127
TaqI	TCGA	3 cut(s)	339, 1034, 1050
TaqII	GACCGA	1 cut(s)	167
TasI	AATT	6 cut(s)	108, 302, 616, 902, 1254, 1306
TatI	WGTACW	2 cut(s)	207, 327
TauI	GCSGC	2 cut(s)	669, 1193
TfiI	GAWTC	3 cut(s)	864, 969, 1147
Tru1I	TTAA	3 cut(s)	137, 513, 1309
Tru9I	TTAA	3 cut(s)	137, 513, 1309
TscAI	CASTG	1 cut(s)	1137
TseFI	GTSAC	1 cut(s)	95
TseI	GCWGC	3 cut(s)	1187, 1237, 1240
Tsp45I	GTSAC	1 cut(s)	95
TspMI	CCCGGG	1 cut(s)	313
TspRI	CASTG	1 cut(s)	1137
VneI	GTGCAC	1 cut(s)	379
VpaK11BI	GGWCC	6 cut(s)	268, 334, 364, 762, 776, 880
XapI	RAATTY	1 cut(s)	1254
XcmI	CCANNNNNNNNNTGG	2 cut(s)	524, 1279
XmaI	CCCGGG	1 cut(s)	313
XmiI	GTMKAC	1 cut(s)	984
XspI	CTAG	2 cut(s)	221, 908
ZrmI	AGTACT	1 cut(s)	209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.