pycom08g17090

KIP1-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
17248812 .. 17250656
1845 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1845 bp
ATGACAGAACTAGCAGAGAAGATTGATAGACTTGTGAACAAGATAGTGAGTCTGGAAACTGCAGTCACTTCTCAGAATGCTTTAGTAAATAGATTAAAATCAGAAAACGATGAGCTTCAGGCGCACGTTCGGAGCTTGGAAGAGGAAAAAGAGACTCTAATGGAAAATGCGGACAAGATGAGCAAACGGCTAAAGGAGTTGGAGGAAGAGCTGCGTCGAATTAGAAATTTAAACAGAAAAGTGGAAGACCAAAATAACAACCTCCAAACACATTTTACGGAAGCTAGCTGTAATCTTGACCATCTGTCAGGAAAACTGAAAAGTGTGAAGCATGAAGAGGAGGATGAGAATGCCGGACTGTTCCAAGATGTGAAAGCAGTTGATGCCAAACCTGAAAAAGAGATTAAAGAAGATTCAAATAAGGCAATTCTTGATGACGATTCGGCGGTCTTGGAAGACAAAATGTCAGAAGGTGAAATTAAGAGAAAGAATGTTACAATTCTCGAAACTTCTATCAAGGAGGAAGACGGAGAAGAAAAGCAATCAGACCAACCAATGCAGCAGGAACAGGGAGAGGCACAAGATTTGTCCGAGGATGTTAATCCACAGGAATTGGAACTAGAGAAGGAAGAACAGCCAAACTGGAGACAGCTGTTCCTAAAAGGGTTAGAGGATAGAGAAAAGGTTTTGCTGGAGGAGTATACTTCAATTCTCCGTGATTACAAAGACGCAAGGAGGAAGCTTGGCGAAGTGGAAAAGAAAAACCGGGATAACATCTTTGATTTAGCAATGGAGATTAGGGAATTAAGGGGTGCTCTTGCCTCCAAAGACAATGAGATTAAACTTTTGAAGCAAAAACTCGGCTCCCCAGAAACAAATCCGGAGGACAGTCCTGCGACAGTATATAAATTTCCAACTCAGGAAGGCACCCTTGAGAGTCCAACTCAAGTGGTTGCATCCCCATACTCAACTGTTGCATCACCAAATTTGGATAAAGAGATGATTTCTAGCTACCTTGGTGAACAAGGAACAGAGAAATTTGAGGACTCATCAGGAAACTCAAAGGTCTTACCAAGAAAGGAGGAAGAGAGAATCATGAGGAGAAGACATACCGTTAGACCCCATTCTGTTTCAGCAATAGAAGGAAGGTTCCGTTCAGACATTGATGAGCTGTTGGAGGAAAATTTAGAATTTTGGCTAAGGTTTAGTACCTCGGTTCATCAGATACAAAAATTCCACACTTCGATACAGGATTTACAGTCTGAGTTGTTGAAACTAAAGAACAAAAAGAAGCATGATGGACATGCTTTACAATCGGATGCCAGGCCAATATACCGACACTTAAGAGAGATACAAACGGAACTGTCATTATGGTTGGAACACAATGCAGTACTAAAAGATGACTTGCAGGGTAGATTATTATCCTTGTGCCATATTCAAGATGAGATATCGAGACTCTCCAGTTTAAGTTCCGAAGGAGAAAATATGGAGCTTATAAGCAAATATCAGGCGGCAAAGTTTCAAGGCGAGGTTCTCAACATGAAGCAGGAGAATAATAAGGTTGCAGATGAACTGCAGGCAGGCCTTAACCGTGTTGATGGACTTAAGGTTGAGGTCGAGAAGACACTAGCAAGACTCGATGGGGAACTTGGGATTTCGGTATCAAGGAGCATTAACAACCCCAAACGCTCAACGAGTAAGTCTCGAATTCCCTTGCGGTCTTTCTTGTTTGGGGTTAAGTTGAGAAGGCAAAGGCCATCAATCTTTTCCTGCGCCAGCTCGTCATTACAGAAACAGCACAGTGATTTAGGAGCAGCTGCGCCACCTCCAGAACAACCTATGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

615

Amino Acids

70.28

Weight (kDa)

5.31

Isoelectric Point (pI)

62.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NET2A PF25014 1 - 109 2.8e-46 NET2A-like domain
NET2A_C PF24918 381 - 553 2.3e-76 NET2A, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013242)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09720 AT1G58215
fragaria_vesca FvH4_5g34781
malus_domestica MD08G1198300.v1.1 MD15G1385600.v1.1
prunus_persica Prupe.1G532400_v2.0.a1
pyrus_communis pycom08g17090 pycom08g17120
rosa_chinensis RchiOBHm_Chr7g0235421
rosa_laevigata RLG00000001161
rosa_multiflora Rmu_sc0042260.1_g000001
rosa_roxburghii Rroxscaffold_3G00226040
rosa_rugosa Rorug07G0290800
rosa_samantha Rh7AG445300 Rh7BG417500 Rh7CG466000 Rh7DG434000
rosa_wichuraiana Rw7G037000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1496
AccB1I GGYRCC 1 cut(s) 926
AccI GTMKAC 1 cut(s) 701
AccIII TCCGGA 1 cut(s) 880
AciI CCGC 4 cut(s) 170, 446, 1511, 1717
AcsI RAATTY 8 cut(s) 226, 908, 985, 1037, 1183, 1190, 1232, 1707
AcuI CTGAAG 1 cut(s) 101
AfaI GTAC 2 cut(s) 1210, 1392
AflII CTTAAG 2 cut(s) 1342, 1604
AgsI TTSAA 6 cut(s) 417, 708, 850, 1273, 1439, 1523
AhdI GACNNNNNGTC 2 cut(s) 304, 463
AjnI CCWGG 1 cut(s) 1322
Alw21I GWGCWC 1 cut(s) 817
Alw26I GTCTC 4 cut(s) 146, 640, 1447, 1707
Aor13HI TCCGGA 1 cut(s) 880
AoxI GGCC 3 cut(s) 1325, 1582, 1754
ApeKI GCWGC 4 cut(s) 211, 559, 1814, 1817
ApoI RAATTY 8 cut(s) 226, 908, 985, 1037, 1183, 1190, 1232, 1707
AspLEI GCGC 3 cut(s) 124, 1775, 1822
AsuC2I CCSGG 1 cut(s) 767
AsuHPI GGTGA 3 cut(s) 485, 972, 1031
AsuNHI GCTAGC 1 cut(s) 284
BanI GGYRCC 1 cut(s) 926
BbsI GAAGAC 5 cut(s) 252, 462, 531, 1111, 1628
Bbv12I GWGCWC 1 cut(s) 817
BbvI GCAGC 4 cut(s) 198, 571, 1804, 1826
BccI CCATC 5 cut(s) 309, 1292, 1592, 1634, 1765
BceAI ACGGC 1 cut(s) 203
BciT130I CCWGG 1 cut(s) 1324
BcnI CCSGG 1 cut(s) 767
BcoDI GTCTC 4 cut(s) 146, 640, 1447, 1707
BfaI CTAG 5 cut(s) 11, 285, 620, 1008, 1628
BfmI CTRYAG 2 cut(s) 60, 1574
BfrI CTTAAG 2 cut(s) 1342, 1604
BisI GCNGC 5 cut(s) 212, 560, 1512, 1815, 1818
BlsI GCNGC 5 cut(s) 213, 561, 1513, 1816, 1819
BmcAI AGTACT 1 cut(s) 1392
Bme1390I CCNGG 2 cut(s) 767, 1324
BmeRI GACNNNNNGTC 2 cut(s) 304, 463
BmiI GGNNCC 3 cut(s) 865, 928, 1151
BmrFI CCNGG 2 cut(s) 767, 1324
BmsI GCATC 4 cut(s) 373, 965, 986, 1309
BmtI GCTAGC 1 cut(s) 288
BpiI GAAGAC 5 cut(s) 252, 462, 531, 1111, 1628
BplI GAGNNNNNCTC 4 cut(s) 928, 960, 1687, 1719
BpmI CTGGAG 4 cut(s) 664, 713, 1444, 1812
Bpu10I CCTNAGC 1 cut(s) 1199
BpuEI CTTGAG 2 cut(s) 930, 953
BpuMI CCSGG 1 cut(s) 767
BsaBI GATNNNNATC 3 cut(s) 97, 600, 1420
BsaJI CCNNGG 3 cut(s) 591, 1015, 1212
BsaWI WCCGGW 1 cut(s) 880
Bse1I ACTGG 2 cut(s) 647, 1461
Bse3DI GCAATG 1 cut(s) 795
Bse8I GATNNNNATC 3 cut(s) 97, 600, 1420
BseAI TCCGGA 1 cut(s) 880
BseBI CCWGG 1 cut(s) 1324
BseDI CCNNGG 3 cut(s) 591, 1015, 1212
BseGI GGATG 4 cut(s) 349, 601, 956, 1324
BseJI GATNNNNATC 3 cut(s) 97, 600, 1420
BseMI GCAATG 1 cut(s) 795
BseMII CTCAG 3 cut(s) 86, 932, 1254
BseNI ACTGG 2 cut(s) 647, 1461
BseRI GAGGAG 3 cut(s) 353, 710, 1114
BseXI GCAGC 4 cut(s) 198, 571, 1804, 1826
BshFI GGCC 3 cut(s) 1327, 1584, 1756
BshNI GGYRCC 1 cut(s) 926
BsiHKAI GWGCWC 1 cut(s) 817
BsiSI CCGG 3 cut(s) 354, 766, 881
BsmAI GTCTC 4 cut(s) 146, 640, 1447, 1707
BsmI GAATGC 2 cut(s) 82, 355
BsnI GGCC 3 cut(s) 1327, 1584, 1756
Bsp1286I GDGCHC 1 cut(s) 817
Bsp13I TCCGGA 1 cut(s) 880
BspACI CCGC 4 cut(s) 170, 446, 1511, 1717
BspANI GGCC 3 cut(s) 1327, 1584, 1756
BspCNI CTCAG 3 cut(s) 85, 931, 1255
BspEI TCCGGA 1 cut(s) 880
BspHI TCATGA 1 cut(s) 1095
BspLI GGNNCC 3 cut(s) 865, 928, 1151
BspMAI CTGCAG 2 cut(s) 64, 1578
BspOI GCTAGC 1 cut(s) 288
BspQI GCTCTTC 1 cut(s) 201
BspT107I GGYRCC 1 cut(s) 926
BspTI CTTAAG 2 cut(s) 1342, 1604
BsrDI GCAATG 1 cut(s) 795
BsrI ACTGG 2 cut(s) 647, 1461
BssECI CCNNGG 3 cut(s) 591, 1015, 1212
BssNAI GTATAC 1 cut(s) 702
BssT1I CCWWGG 1 cut(s) 1015
Bst1107I GTATAC 1 cut(s) 702
Bst2UI CCWGG 1 cut(s) 1324
Bst4CI ACNGT 9 cut(s) 360, 890, 901, 973, 1114, 1260, 1365, 1592, 1802
Bst6I CTCTTC 4 cut(s) 135, 201, 330, 1080
BstAFI CTTAAG 2 cut(s) 1342, 1604
BstAPI GCANNNNNTGC 1 cut(s) 383
BstC8I GCNNGC 4 cut(s) 286, 1578, 1582, 1777
BstDEI CTNAG 4 cut(s) 72, 918, 1199, 1263
BstF5I GGATG 4 cut(s) 349, 601, 956, 1324
BstHHI GCGC 3 cut(s) 124, 1775, 1822
BstMAI GTCTC 4 cut(s) 146, 640, 1447, 1707
BstMWI GCNNNNNNNGC 2 cut(s) 121, 383
BstNI CCWGG 1 cut(s) 1324
BstNSI RCATGY 1 cut(s) 1307
BstSCI CCNGG 2 cut(s) 765, 1322
BstSFI CTRYAG 2 cut(s) 60, 1574
BstV1I GCAGC 4 cut(s) 198, 571, 1804, 1826
BstV2I GAAGAC 5 cut(s) 252, 462, 531, 1111, 1628
BstZ17I GTATAC 1 cut(s) 702
BsuRI GGCC 3 cut(s) 1327, 1584, 1756
BtsCI GGATG 4 cut(s) 349, 601, 956, 1324
BtsIMutI CAGTG 1 cut(s) 1807
Cac8I GCNNGC 4 cut(s) 286, 1578, 1582, 1777
CciI TCATGA 1 cut(s) 1095
CfoI GCGC 3 cut(s) 124, 1775, 1822
CseI GACGC 2 cut(s) 203, 737
Csp6I GTAC 2 cut(s) 1209, 1391
CspCI CAANNNNNGTGG 4 cut(s) 594, 629, 930, 965
CviAII CATG 5 cut(s) 332, 1096, 1295, 1304, 1540
CviQI GTAC 2 cut(s) 1209, 1391
DdeI CTNAG 4 cut(s) 72, 918, 1199, 1263
DraI TTTAAA 1 cut(s) 231
DriI GACNNNNNGTC 2 cut(s) 304, 463
Eam1104I CTCTTC 4 cut(s) 135, 201, 330, 1080
Eam1105I GACNNNNNGTC 2 cut(s) 304, 463
EarI CTCTTC 4 cut(s) 135, 201, 330, 1080
Eco130I CCWWGG 1 cut(s) 1015
Eco147I AGGCCT 1 cut(s) 1584
Eco32I GATATC 1 cut(s) 1449
Eco57I CTGAAG 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 1707
EcoRII CCWGG 1 cut(s) 1322
EcoRV GATATC 1 cut(s) 1449
EcoT14I CCWWGG 1 cut(s) 1015
ErhI CCWWGG 1 cut(s) 1015
FaeI CATG 5 cut(s) 335, 1099, 1298, 1307, 1543
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FatI CATG 5 cut(s) 331, 1095, 1294, 1303, 1539
FblI GTMKAC 1 cut(s) 701
Fnu4HI GCNGC 5 cut(s) 212, 560, 1512, 1815, 1818
FokI GGATG 4 cut(s) 356, 608, 943, 1331
Fsp4HI GCNGC 5 cut(s) 212, 560, 1512, 1815, 1818
FspBI CTAG 5 cut(s) 11, 285, 620, 1008, 1628
GlaI GCGC 3 cut(s) 123, 1774, 1821
GluI GCNGC 5 cut(s) 212, 560, 1512, 1815, 1818
GsuI CTGGAG 4 cut(s) 664, 713, 1444, 1812
HaeIII GGCC 3 cut(s) 1327, 1584, 1756
HapII CCGG 3 cut(s) 354, 766, 881
HgaI GACGC 2 cut(s) 203, 737
HhaI GCGC 3 cut(s) 124, 1775, 1822
Hin1II CATG 5 cut(s) 335, 1099, 1298, 1307, 1543
Hin6I GCGC 3 cut(s) 122, 1773, 1820
HinP1I GCGC 3 cut(s) 122, 1773, 1820
HindIII AAGCTT 1 cut(s) 740
HinfI GANTC 9 cut(s) 49, 154, 413, 440, 937, 1046, 1092, 1455, 1635
HpaII CCGG 3 cut(s) 354, 766, 881
HphI GGTGA 3 cut(s) 485, 972, 1031
Hpy166II GTNNAC 3 cut(s) 37, 702, 1022
Hpy8I GTNNAC 3 cut(s) 37, 702, 1022
Hpy99I CGWCG 1 cut(s) 219
HpyAV CCTTC 7 cut(s) 464, 619, 917, 1136, 1140, 1469, 1740
HpyCH4III ACNGT 9 cut(s) 360, 890, 901, 973, 1114, 1260, 1365, 1592, 1802
HpyCH4IV ACGT 1 cut(s) 126
HpyCH4V TGCA 8 cut(s) 62, 559, 956, 977, 1388, 1408, 1565, 1576
HpyF10VI GCNNNNNNNGC 2 cut(s) 121, 383
HpyF3I CTNAG 4 cut(s) 72, 918, 1199, 1263
HpySE526I ACGT 1 cut(s) 126
Hsp92II CATG 5 cut(s) 335, 1099, 1298, 1307, 1543
HspAI GCGC 3 cut(s) 122, 1773, 1820
Kpn2I TCCGGA 1 cut(s) 880
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 5 cut(s) 132, 869, 1489, 1668, 1811
Lsp1109I GCAGC 4 cut(s) 198, 571, 1804, 1826
LweI GCATC 4 cut(s) 373, 965, 986, 1309
MaeI CTAG 5 cut(s) 11, 285, 620, 1008, 1628
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 2 cut(s) 64, 493
MhlI GDGCHC 1 cut(s) 817
MlyI GAGTC 6 cut(s) 58, 148, 946, 1040, 1449, 1629
MmeI TCCRAC 5 cut(s) 180, 938, 965, 1155, 1356
MroI TCCGGA 1 cut(s) 880
MspA1I CMGCKG 2 cut(s) 652, 1817
MspCI CTTAAG 2 cut(s) 1342, 1604
MspI CCGG 3 cut(s) 354, 766, 881
MspR9I CCNGG 2 cut(s) 767, 1324
Mva1269I GAATGC 2 cut(s) 82, 355
MvaI CCWGG 1 cut(s) 1324
MwoI GCNNNNNNNGC 2 cut(s) 121, 383
NciI CCSGG 1 cut(s) 767
NheI GCTAGC 1 cut(s) 284
NlaIII CATG 5 cut(s) 335, 1099, 1298, 1307, 1543
NlaIV GGNNCC 3 cut(s) 865, 928, 1151
NmeAIII GCCGAG 1 cut(s) 840
NmuCI GTSAC 1 cut(s) 64
NspI RCATGY 1 cut(s) 1307
PagI TCATGA 1 cut(s) 1095
PceI AGGCCT 1 cut(s) 1584
PciSI GCTCTTC 1 cut(s) 201
PctI GAATGC 2 cut(s) 82, 355
PfeI GAWTC 3 cut(s) 413, 440, 1092
PkrI GCNGC 5 cut(s) 213, 561, 1513, 1816, 1819
PleI GAGTC 6 cut(s) 57, 148, 945, 1040, 1449, 1629
PpsI GAGTC 6 cut(s) 57, 148, 945, 1040, 1449, 1629
PsiI TTATAA 1 cut(s) 1496
Psp6I CCWGG 1 cut(s) 1322
PspGI CCWGG 1 cut(s) 1322
PspN4I GGNNCC 3 cut(s) 865, 928, 1151
PstI CTGCAG 2 cut(s) 64, 1578
PvuII CAGCTG 2 cut(s) 652, 1817
RsaI GTAC 2 cut(s) 1210, 1392
RsaNI GTAC 2 cut(s) 1209, 1391
SapI GCTCTTC 1 cut(s) 201
SatI GCNGC 5 cut(s) 212, 560, 1512, 1815, 1818
ScaI AGTACT 1 cut(s) 1392
SchI GAGTC 6 cut(s) 58, 148, 946, 1040, 1449, 1629
ScrFI CCNGG 2 cut(s) 767, 1324
SduI GDGCHC 1 cut(s) 817
SfaNI GCATC 4 cut(s) 373, 965, 986, 1309
SfcI CTRYAG 2 cut(s) 60, 1574
SmlI CTYRAG 4 cut(s) 932, 945, 1342, 1604
SmoI CTYRAG 4 cut(s) 932, 945, 1342, 1604
SseBI AGGCCT 1 cut(s) 1584
SsiI CCGC 4 cut(s) 170, 446, 1511, 1717
SspMI CTAG 5 cut(s) 11, 285, 620, 1008, 1628
StuI AGGCCT 1 cut(s) 1584
StyD4I CCNGG 2 cut(s) 765, 1322
StyI CCWWGG 1 cut(s) 1015
TaaI ACNGT 9 cut(s) 360, 890, 901, 973, 1114, 1260, 1365, 1592, 1802
TaiI ACGT 1 cut(s) 129
TaqI TCGA 7 cut(s) 217, 504, 1244, 1451, 1617, 1638, 1705
TatI WGTACW 1 cut(s) 1390
TauI GCSGC 1 cut(s) 1514
TfiI GAWTC 3 cut(s) 413, 440, 1092
TscAI CASTG 1 cut(s) 1807
TseFI GTSAC 1 cut(s) 64
TseI GCWGC 4 cut(s) 211, 559, 1814, 1817
Tsp45I GTSAC 1 cut(s) 64
TspDTI ATGAA 4 cut(s) 348, 1208, 1556, 1584
TspGWI ACGGA 5 cut(s) 293, 543, 704, 1142, 1373
TspRI CASTG 1 cut(s) 1807
Vha464I CTTAAG 2 cut(s) 1342, 1604
XapI RAATTY 8 cut(s) 226, 908, 985, 1037, 1183, 1190, 1232, 1707
XceI RCATGY 1 cut(s) 1307
XmiI GTMKAC 1 cut(s) 701
XspI CTAG 5 cut(s) 11, 285, 620, 1008, 1628
ZrmI AGTACT 1 cut(s) 1392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.