Rroxscaffold_3G00226040

KIP1-like protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
9506352 .. 9510106
3755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00226040.1

Sequence Viewer

Length: 2880 bp
ATGTTGCAGAGAGCAGCAAGCAATGCATATTCATGGTGGTGGGCCAGCCACATCAGGACCAAGCAGTCAAAATGGCTGGAACAAAACCTCCAAGATATGGAGGAGAAGGTTCATAGCACACTCAAAATCATTGATAACGATGGGGACTCCTTTGCCCAGAGGGCAGAAATGTACTACAAGAAGAGGCCAGAGCTAGTAATCTTCGTTGAAGAATTCTTTCGGGCATACCGAGCTTTAGCAGAGAGATATGATCACTTGTCAAGAGATCTGCAGAGTGCCAACCGTACCATTGCCACTGTTTTCCCAGAACGAGTTCAGTATGCAATGGAGGATGAGGATGATGAAACTGCTTCTCAAACGTCGGTTTCTTCCAATGATACCAACAAAGCCTATCCCGATGTAAACAACGCAAGCATCCCAAAAGTCCCCAAGGGCCCAGATAAAGATTTCAGGAGCAAGTCCATGCTACTCTTGAAGAAGGGCACGCCTCGAAGACTTCCTAGCTCTCCTAGACCTGCTGCAGGTCCTCCAAGGTCGGGGCTGACGAAAGAAGAGGCATTAGAAGAAATTGATAAGCTTCATAAGGACATTTTGGCTCTACAAACTGAAAAGGAGTTTGTGAAGACCATGTATGAACGAGGGTATGACAGGTACTGGGAGTTTGAGAATGAGATCACGGCAATGCAAAAAAGAGTTTCGAGCTTACAAGATGAGTATGGCATTGGCACTGTTATTGAAGACAATGAAGCTCGAACTTTAATGGCAGCCACAGCTCTAAAATCATGCAAAGAAAGCTTGACTGAGTTGCGGGAAAAGAAAGACATATCAGAAAAAGAGGTAAGAATTGAGGGCAGAAGGGTCAGGGAAGCCTGTAAGAAGTTCGAGAACCTCAAGCATGAATTTCGTTCGAAGGGGAAAAACTGGTCTGATGCTGATGATGAACACGAGTCTGAGACCAGTGATCTAGAATCAAAAAGTGTAGACAATGAGAGGCGTGACAAGCAGTTTTATCAGGCTAAGATGGATGAACAACTCAACAATAGTTCAGATGGCTCTCTCACAATGACAGAACTGGCAGACAAAATTGATGGACTTGTGAACAAGGTTGTGTCGCTGGAAACTGCAGTCACTTCTCAGAATGCACTTGTACACAGATTAAAATCAGAAACAGATGAACTTCAGGCACAAGTTCGGAGCTTGGAAGAGGAAAAGGAAATACTGATGGAAAGTGAGGACAATTTGAAAAGAAAGCTAAAGGAGATGGATGAGGAGTTGCGTAGAATTAAGAACTTAAAAAGGAGTGTAGAAAACCAAAATATCAACCTCGAACTGCATTTCACAGAAGCTTGTAGTAATCTTGATAATCTCTCTACAAAATTGCAAAATGTGAAGCATGACGTGGAGGATGAGAGTACTGTACTATTCCAGGAATTGAGAGCAGTTGATAACAAACCAGAGAAGCAGTTGAAAGATGATTCAGATAAGCCCGCTGCTCATGATGAAGAAGACGTTTCAAAATCTGTCAAGGGTGAAGAAGAGGAAAACAAAACTTATACAAGAAATAGCCTTGATTTGTCTCAAGAAGCACTGCCGCAGGAAGAGGGTGAGAGCAATCTTGTTGAGCCACAGGAGTTGGAGCAGGAAAATGAAGAAAATCAACCCAACTGGAGGCAATTATTCCTAAAAGGTTTAGAGGATAGAGAGAAGATTCTGCTGGAAGAGTATACTTCAATTCTTCGGGATTATAAGGAAGCAAGGAAGAAGCTCAGTGAAGCTGAGAAGAAAAACCGGGATAACATCTTTGATTTGGCTATGGAGATAAGGGATTTGAGGAGTATAATTGCTTCAAAGGACAAAGAAATTAGACTTCTAAAGCAAAAACAGAACCCCACAGACATGAATCCTGAAGAAAGTCCATGTTCGACAGTGTATAAGTACCCGAATAACGATGTCCCCTTGGAGAGCCCAAGTCAAGTTGTCACACCCCCATACTCTACTGGTCCATCACCCTATGTGGATAAAGACACACTTGCTGAAATTCTTCGTGAAACCTCAGAAAAATTTGATTACTCATCAGGAAACTTGAAGGTCACGCCTAGAAAGGAGGAAGAGAAAACAATCAGGAAAAGGCATGCTGTTAGACCCCATTCCTTTTCAGCTATTGAAGGAAGATTCCGTGCAGACATTGATGAACTGCTGGAGGAGAACCTAGAATTCTGGTTGAGGTTTAGTACCTCAATTCATCAGATACAAAAGTTCCAGACTTCAATTCATGACTTACAGTCAGAGTTGATAAAAATGAAGAAGCATGCTCTAGAATCAGATGGCAAGCCGATATATAGACACCTGAGAGAGATACAAACTGAATTGTCATTATGGCTGGAACATAATGCAGTGCTGAAGGAGGACTTGCAGAGCAGGTACTCTTCTTTGTGCCACATTCAAGATGAGATATCGAGACTCTCGAATTTAAGTTCCGAAGGGGAGAAGACAGAGCTTATAAGCAAATACCAGGCAGCAAAGTTTCAAGGCGAGATTCTGAACATGAAGCAGGAGAACCTCAAGGTTGCAGAAGAATTGAAGGCAGGTCTTAACCGTGTTAAAGGACTCAAAGTTGAGGTCGAGAAGACACTAGCAAAACTTGATGAGGAACTTGGGATGTCGGCATCAAATGGTGATCAACCTAAACGAAGTAAGGCTCGAATTCCCTTGCGGTCTTTCTTGTTTGGTGTCAAGTTAAGACAAAAAAAGCCATCACTCTTCTCGGGCCAACAATCACTCTTCTCATGCGCTAGCCCGGCATTACAGAAACAATACAGCGATGTGTCGGAAGCTGAACAACCTCCACCACAACCACAATCTCCACCACAAGCAATGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

959

Amino Acids

110.78

Weight (kDa)

5.35

Isoelectric Point (pI)

60.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 11 - 84 3.6e-36 KIP1-like protein
NET2A PF25014 235 - 463 7e-81 NET2A-like domain
NET2A_C PF24918 722 - 889 3.8e-71 NET2A, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013242)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09720 AT1G58215
fragaria_vesca FvH4_5g34781
malus_domestica MD08G1198300.v1.1 MD15G1385600.v1.1
prunus_persica Prupe.1G532400_v2.0.a1
pyrus_communis pycom08g17090 pycom08g17120
rosa_chinensis RchiOBHm_Chr7g0235421
rosa_laevigata RLG00000001161
rosa_multiflora Rmu_sc0042260.1_g000001
rosa_roxburghii Rroxscaffold_3G00226040
rosa_rugosa Rorug07G0290800
rosa_samantha Rh7AG445300 Rh7BG417500 Rh7CG466000 Rh7DG434000
rosa_wichuraiana Rw7G037000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1746, 2501
AasI GACNNNNNNGTC 1 cut(s) 64
Acc36I ACCTGC 4 cut(s) 512, 523, 2409, 2576
AccB7I CCANNNNNTGG 1 cut(s) 97
AccI GTMKAC 2 cut(s) 981, 1724
AciI CCGC 4 cut(s) 808, 1488, 1592, 2713
AcsI RAATTY 7 cut(s) 212, 899, 2037, 2060, 2213, 2467, 2703
AcuI CTGAAG 3 cut(s) 1163, 1926, 2420
AfaI GTAC 9 cut(s) 173, 286, 653, 1149, 1414, 1419, 1937, 2233, 2423
AfiI CCNNNNNNNGG 4 cut(s) 97, 521, 536, 1668
AhdI GACNNNNNGTC 1 cut(s) 2281
AjiI CACGTC 1 cut(s) 1399
AjnI CCWGG 2 cut(s) 1425, 2511
AloI GAACNNNNNNTCC 2 cut(s) 72, 104
Alw26I GTCTC 3 cut(s) 947, 1581, 2452
AlwNI CAGNNNCTG 1 cut(s) 654
Ama87I CYCGRG 1 cut(s) 2764
AoxI GGCC 4 cut(s) 42, 185, 433, 2767
ApaI GGGCCC 1 cut(s) 437
ApeKI GCWGC 5 cut(s) 14, 518, 764, 1490, 2516
ApoI RAATTY 7 cut(s) 212, 899, 2037, 2060, 2213, 2467, 2703
ArsI GACNNNNNNTTYG 2 cut(s) 2604, 2636
Asp700I GAANNNNTTC 3 cut(s) 216, 312, 2040
AspLEI GCGC 1 cut(s) 2792
AspS9I GGNCC 7 cut(s) 42, 57, 433, 434, 524, 2000, 2767
AsuC2I CCSGG 2 cut(s) 1790, 2798
AsuHPI GGTGA 4 cut(s) 1541, 1616, 1998, 2687
AsuII TTCGAA 1 cut(s) 908
AsuNHI GCTAGC 1 cut(s) 2792
AvaI CYCGRG 1 cut(s) 2764
AvaII GGWCC 3 cut(s) 57, 524, 2000
BaeGI GKGCMC 2 cut(s) 437, 485
BaeI ACNNNNGTAYC 2 cut(s) 2240, 2273
BanII GRGCYC 2 cut(s) 437, 1967
BarI GAAGNNNNNNTAC 2 cut(s) 1828, 1860
BauI CACGAG 1 cut(s) 944
BbsI GAAGAC 6 cut(s) 499, 629, 744, 1512, 2495, 2633
BbvI GCAGC 5 cut(s) 26, 505, 776, 1477, 2528
BccI CCATC 9 cut(s) 134, 1015, 1043, 1082, 1216, 1255, 2011, 2318, 2761
BceAI ACGGC 1 cut(s) 693
BcgI CGANNNNNNTGC 2 cut(s) 884, 918
BciT130I CCWGG 2 cut(s) 1427, 2513
BclI TGATCA 2 cut(s) 250, 2677
BcnI CCSGG 2 cut(s) 1790, 2798
BcoDI GTCTC 3 cut(s) 947, 1581, 2452
BfaI CTAG 9 cut(s) 194, 501, 510, 965, 2097, 2210, 2315, 2633, 2793
BfmI CTRYAG 3 cut(s) 269, 519, 1122
BfuAI ACCTGC 4 cut(s) 512, 523, 2409, 2576
BglI GCCNNNNNGGC 1 cut(s) 161
BglII AGATCT 1 cut(s) 265
BisI GCNGC 6 cut(s) 15, 519, 765, 1491, 1592, 2517
BlsI GCNGC 6 cut(s) 16, 520, 766, 1492, 1593, 2518
BmcAI AGTACT 1 cut(s) 1414
Bme1390I CCNGG 4 cut(s) 1427, 1790, 2513, 2798
Bme18I GGWCC 3 cut(s) 57, 524, 2000
BmeRI GACNNNNNGTC 1 cut(s) 2281
BmeT110I CYCGRG 1 cut(s) 2764
BmgBI CACGTC 1 cut(s) 1399
BmgT120I GGNCC 7 cut(s) 42, 57, 433, 434, 524, 2000, 2767
BmiI GGNNCC 1 cut(s) 435
BmrFI CCNGG 4 cut(s) 1427, 1790, 2513, 2798
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 3 cut(s) 423, 919, 2675
BmtI GCTAGC 1 cut(s) 2796
BmuI ACTGGG 1 cut(s) 664
BpiI GAAGAC 6 cut(s) 499, 629, 744, 1512, 2495, 2633
BpmI CTGGAG 2 cut(s) 1687, 2219
Bpu14I TTCGAA 1 cut(s) 908
BpuEI CTTGAG 3 cut(s) 875, 1563, 2546
BpuMI CCSGG 2 cut(s) 1790, 2798
BsaBI GATNNNNATC 1 cut(s) 1159
BsaI GGTCTC 1 cut(s) 947
BsaJI CCNNGG 3 cut(s) 429, 530, 1956
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 521, 536, 1668
Bse1I ACTGG 6 cut(s) 659, 926, 957, 1077, 1670, 2002
Bse3DI GCAATG 5 cut(s) 28, 288, 330, 687, 2880
Bse8I GATNNNNATC 1 cut(s) 1159
BseBI CCWGG 2 cut(s) 1427, 2513
BseDI CCNNGG 3 cut(s) 429, 530, 1956
BseGI GGATG 7 cut(s) 337, 343, 414, 1030, 1270, 1411, 2664
BseJI GATNNNNATC 1 cut(s) 1159
BseLI CCNNNNNNNGG 4 cut(s) 97, 521, 536, 1668
BseMI GCAATG 5 cut(s) 28, 288, 330, 687, 2880
BseMII CTCAG 7 cut(s) 792, 942, 1148, 1767, 1780, 2067, 2339
BseNI ACTGG 6 cut(s) 659, 926, 957, 1077, 1670, 2002
BseRI GAGGAG 4 cut(s) 116, 1283, 1846, 2216
BseSI GKGCMC 2 cut(s) 437, 485
BseXI GCAGC 5 cut(s) 26, 505, 776, 1477, 2528
BsgI GTGCAG 1 cut(s) 2199
BshFI GGCC 4 cut(s) 44, 187, 435, 2769
BsiHKCI CYCGRG 1 cut(s) 2764
BsiSI CCGG 2 cut(s) 1789, 2798
BslFI GGGAC 3 cut(s) 158, 410, 1937
BslI CCNNNNNNNGG 4 cut(s) 97, 521, 536, 1668
BsmAI GTCTC 3 cut(s) 947, 1581, 2452
BsmFI GGGAC 3 cut(s) 158, 410, 1937
BsmI GAATGC 1 cut(s) 1144
BsnI GGCC 4 cut(s) 44, 187, 435, 2769
Bso31I GGTCTC 1 cut(s) 947
BsoBI CYCGRG 1 cut(s) 2764
Bsp119I TTCGAA 1 cut(s) 908
Bsp120I GGGCCC 1 cut(s) 433
Bsp1286I GDGCHC 3 cut(s) 437, 485, 1967
Bsp1407I TGTACA 1 cut(s) 1147
Bsp143I GATC 5 cut(s) 250, 265, 672, 961, 2677
BspACI CCGC 4 cut(s) 808, 1488, 1592, 2713
BspANI GGCC 4 cut(s) 44, 187, 435, 2769
BspCNI CTCAG 7 cut(s) 793, 943, 1147, 1768, 1779, 2066, 2340
BspHI TCATGA 2 cut(s) 1495, 2272
BspLI GGNNCC 1 cut(s) 435
BspMAI CTGCAG 3 cut(s) 273, 523, 1126
BspMI ACCTGC 4 cut(s) 512, 523, 2409, 2576
BspOI GCTAGC 1 cut(s) 2796
BspT104I TTCGAA 1 cut(s) 908
BspTNI GGTCTC 1 cut(s) 947
BsrDI GCAATG 5 cut(s) 28, 288, 330, 687, 2880
BsrGI TGTACA 1 cut(s) 1147
BsrI ACTGG 6 cut(s) 659, 926, 957, 1077, 1670, 2002
BssECI CCNNGG 3 cut(s) 429, 530, 1956
BssMI GATC 5 cut(s) 250, 265, 672, 961, 2677
BssNAI GTATAC 1 cut(s) 1725
BssSI CACGAG 1 cut(s) 944
BssT1I CCWWGG 3 cut(s) 429, 530, 1956
Bst1107I GTATAC 1 cut(s) 1725
Bst2BI CACGAG 1 cut(s) 944
Bst2UI CCWGG 2 cut(s) 1427, 2513
Bst4CI ACNGT 7 cut(s) 284, 298, 730, 1417, 1927, 2283, 2597
BstAPI GCANNNNNTGC 1 cut(s) 23
BstAUI TGTACA 1 cut(s) 1147
BstBI TTCGAA 1 cut(s) 908
BstC8I GCNNGC 9 cut(s) 19, 46, 412, 485, 1488, 2133, 2310, 2330, 2794
BstDEI CTNAG 8 cut(s) 801, 951, 1017, 1134, 1766, 1776, 2053, 2348
BstENI CCTNNNNNAGG 1 cut(s) 519
BstF5I GGATG 7 cut(s) 337, 343, 414, 1030, 1270, 1411, 2664
BstHHI GCGC 1 cut(s) 2792
BstKTI GATC 5 cut(s) 253, 268, 675, 964, 2680
BstMAI GTCTC 3 cut(s) 947, 1581, 2452
BstMBI GATC 5 cut(s) 250, 265, 672, 961, 2677
BstMWI GCNNNNNNNGC 7 cut(s) 23, 161, 230, 770, 792, 1000, 2798
BstNI CCWGG 2 cut(s) 1427, 2513
BstNSI RCATGY 2 cut(s) 2135, 2312
BstSCI CCNGG 4 cut(s) 1425, 1788, 2511, 2796
BstSFI CTRYAG 3 cut(s) 269, 519, 1122
BstSLI GKGCMC 2 cut(s) 437, 485
BstV1I GCAGC 5 cut(s) 26, 505, 776, 1477, 2528
BstV2I GAAGAC 6 cut(s) 499, 629, 744, 1512, 2495, 2633
BstX2I RGATCY 1 cut(s) 265
BstYI RGATCY 1 cut(s) 265
BstZ17I GTATAC 1 cut(s) 1725
BsuRI GGCC 4 cut(s) 44, 187, 435, 2769
BtgZI GCGATG 1 cut(s) 2835
BtrI CACGTC 1 cut(s) 1399
BtsCI GGATG 7 cut(s) 337, 343, 414, 1030, 1270, 1411, 2664
BtsI GCAGTG 2 cut(s) 1586, 2400
BtsIMutI CAGTG 7 cut(s) 294, 726, 964, 1586, 1774, 1932, 2400
BveI ACCTGC 4 cut(s) 512, 523, 2409, 2576
Cac8I GCNNGC 9 cut(s) 19, 46, 412, 485, 1488, 2133, 2310, 2330, 2794
CaiI CAGNNNCTG 1 cut(s) 654
CciI TCATGA 2 cut(s) 1495, 2272
CfoI GCGC 1 cut(s) 2792
Cfr13I GGNCC 7 cut(s) 42, 57, 433, 434, 524, 2000, 2767
Csp6I GTAC 9 cut(s) 172, 285, 652, 1148, 1413, 1418, 1936, 2232, 2422
CspCI CAANNNNNGTGG 2 cut(s) 1614, 1649
CviQI GTAC 9 cut(s) 172, 285, 652, 1148, 1413, 1418, 1936, 2232, 2422
DdeI CTNAG 8 cut(s) 801, 951, 1017, 1134, 1766, 1776, 2053, 2348
DpnI GATC 5 cut(s) 252, 267, 674, 963, 2679
DpnII GATC 5 cut(s) 250, 265, 672, 961, 2677
DrdI GACNNNNNNGTC 1 cut(s) 64
DriI GACNNNNNGTC 1 cut(s) 2281
DseDI GACNNNNNNGTC 1 cut(s) 64
Eam1105I GACNNNNNGTC 1 cut(s) 2281
Eco130I CCWWGG 3 cut(s) 429, 530, 1956
Eco24I GRGCYC 2 cut(s) 437, 1967
Eco31I GGTCTC 1 cut(s) 947
Eco32I GATATC 1 cut(s) 2454
Eco47I GGWCC 3 cut(s) 57, 524, 2000
Eco57I CTGAAG 3 cut(s) 1163, 1926, 2420
Eco88I CYCGRG 1 cut(s) 2764
EcoNI CCTNNNNNAGG 1 cut(s) 519
EcoO109I RGGNCCY 2 cut(s) 433, 524
EcoRI GAATTC 3 cut(s) 212, 2213, 2703
EcoRII CCWGG 2 cut(s) 1425, 2511
EcoRV GATATC 1 cut(s) 2454
EcoT14I CCWWGG 3 cut(s) 429, 530, 1956
EcoT22I ATGCAT 1 cut(s) 28
EcoT38I GRGCYC 2 cut(s) 437, 1967
ErhI CCWWGG 3 cut(s) 429, 530, 1956
FalI AAGNNNNNCTT 4 cut(s) 2013, 2045, 2393, 2425
FaqI GGGAC 3 cut(s) 158, 410, 1937
FauI CCCGC 2 cut(s) 801, 1495
FbaI TGATCA 2 cut(s) 250, 2677
FblI GTMKAC 2 cut(s) 981, 1724
Fnu4HI GCNGC 6 cut(s) 15, 519, 765, 1491, 1592, 2517
FokI GGATG 7 cut(s) 344, 350, 401, 1037, 1277, 1418, 2671
FriOI GRGCYC 2 cut(s) 437, 1967
Fsp4HI GCNGC 6 cut(s) 15, 519, 765, 1491, 1592, 2517
FspBI CTAG 9 cut(s) 194, 501, 510, 965, 2097, 2210, 2315, 2633, 2793
GlaI GCGC 1 cut(s) 2791
GluI GCNGC 6 cut(s) 15, 519, 765, 1491, 1592, 2517
GsuI CTGGAG 2 cut(s) 1687, 2219
HaeIII GGCC 4 cut(s) 44, 187, 435, 2769
HapII CCGG 2 cut(s) 1789, 2798
HhaI GCGC 1 cut(s) 2792
Hin6I GCGC 1 cut(s) 2790
HinP1I GCGC 1 cut(s) 2790
HindIII AAGCTT 3 cut(s) 575, 793, 1344
HpaII CCGG 2 cut(s) 1789, 2798
HphI GGTGA 4 cut(s) 1541, 1616, 1998, 2687
Hpy166II GTNNAC 5 cut(s) 403, 982, 1099, 1150, 1725
Hpy8I GTNNAC 5 cut(s) 403, 982, 1099, 1150, 1725
Hpy99I CGWCG 1 cut(s) 364
HpyAV CCTTC 9 cut(s) 100, 472, 849, 904, 2080, 2159, 2395, 2474, 2575
HpyCH4III ACNGT 7 cut(s) 284, 298, 730, 1417, 1927, 2283, 2597
HpyCH4IV ACGT 3 cut(s) 359, 1398, 1509
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 161, 230, 770, 792, 1000, 2798
HpyF3I CTNAG 8 cut(s) 801, 951, 1017, 1134, 1766, 1776, 2053, 2348
HpySE526I ACGT 3 cut(s) 359, 1398, 1509
HspAI GCGC 1 cut(s) 2790
Ksp22I TGATCA 2 cut(s) 250, 2677
Kzo9I GATC 5 cut(s) 250, 265, 672, 961, 2677
LmnI GCTCC 3 cut(s) 453, 1194, 1636
Lsp1109I GCAGC 5 cut(s) 26, 505, 776, 1477, 2528
LweI GCATC 3 cut(s) 423, 919, 2675
MaeI CTAG 9 cut(s) 194, 501, 510, 965, 2097, 2210, 2315, 2633, 2793
MaeII ACGT 3 cut(s) 359, 1398, 1509
MaeIII GTNAC 4 cut(s) 995, 1126, 1978, 2089
MalI GATC 5 cut(s) 252, 267, 674, 963, 2679
MboI GATC 5 cut(s) 250, 265, 672, 961, 2677
MflI RGATCY 1 cut(s) 265
MhlI GDGCHC 3 cut(s) 437, 485, 1967
MlyI GAGTC 4 cut(s) 140, 956, 2454, 2601
MmeI TCCRAC 2 cut(s) 1614, 2808
Mph1103I ATGCAT 1 cut(s) 28
MroXI GAANNNNTTC 3 cut(s) 216, 312, 2040
MseI TTAA 8 cut(s) 758, 1157, 1284, 1292, 2471, 2592, 2601, 2738
MslI CAYNNNNRTG 4 cut(s) 31, 37, 680, 1895
MspA1I CMGCKG 1 cut(s) 1490
MspI CCGG 2 cut(s) 1789, 2798
MspR9I CCNGG 4 cut(s) 1427, 1790, 2513, 2798
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 2 cut(s) 1427, 2513
MwoI GCNNNNNNNGC 7 cut(s) 23, 161, 230, 770, 792, 1000, 2798
NciI CCSGG 2 cut(s) 1790, 2798
NdeII GATC 5 cut(s) 250, 265, 672, 961, 2677
NheI GCTAGC 1 cut(s) 2792
NlaIV GGNNCC 1 cut(s) 435
NmuCI GTSAC 4 cut(s) 995, 1126, 1978, 2089
NsiI ATGCAT 1 cut(s) 28
NspI RCATGY 2 cut(s) 2135, 2312
NspV TTCGAA 1 cut(s) 908
PaeI GCATGC 2 cut(s) 2135, 2312
PagI TCATGA 2 cut(s) 1495, 2272
PcsI WCGNNNNNNNCGW 3 cut(s) 226, 542, 2462
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 3 cut(s) 216, 312, 2040
PfeI GAWTC 7 cut(s) 968, 1475, 1708, 1900, 2172, 2318, 2536
PflMI CCANNNNNTGG 1 cut(s) 97
PfoI TCCNGGA 1 cut(s) 1425
PkrI GCNGC 6 cut(s) 16, 520, 766, 1492, 1593, 2518
PleI GAGTC 4 cut(s) 140, 955, 2454, 2601
PpsI GAGTC 4 cut(s) 140, 955, 2454, 2601
PpuMI RGGWCCY 1 cut(s) 524
PsiI TTATAA 2 cut(s) 1746, 2501
Psp5II RGGWCCY 1 cut(s) 524
Psp6I CCWGG 2 cut(s) 1425, 2511
PspGI CCWGG 2 cut(s) 1425, 2511
PspN4I GGNNCC 1 cut(s) 435
PspOMI GGGCCC 1 cut(s) 433
PspPI GGNCC 7 cut(s) 42, 57, 433, 434, 524, 2000, 2767
PspPPI RGGWCCY 1 cut(s) 524
PstI CTGCAG 3 cut(s) 273, 523, 1126
PstNI CAGNNNCTG 1 cut(s) 654
PsuI RGATCY 1 cut(s) 265
RsaI GTAC 9 cut(s) 173, 286, 653, 1149, 1414, 1419, 1937, 2233, 2423
RsaNI GTAC 9 cut(s) 172, 285, 652, 1148, 1413, 1418, 1936, 2232, 2422
RseI CAYNNNNRTG 4 cut(s) 31, 37, 680, 1895
SaqAI TTAA 8 cut(s) 758, 1157, 1284, 1292, 2471, 2592, 2601, 2738
SatI GCNGC 6 cut(s) 15, 519, 765, 1491, 1592, 2517
Sau3AI GATC 5 cut(s) 250, 265, 672, 961, 2677
Sau96I GGNCC 7 cut(s) 42, 57, 433, 434, 524, 2000, 2767
ScaI AGTACT 1 cut(s) 1414
SchI GAGTC 4 cut(s) 140, 956, 2454, 2601
ScrFI CCNGG 4 cut(s) 1427, 1790, 2513, 2798
SduI GDGCHC 3 cut(s) 437, 485, 1967
SfaNI GCATC 3 cut(s) 423, 919, 2675
SfcI CTRYAG 3 cut(s) 269, 519, 1122
SfuI TTCGAA 1 cut(s) 908
SinI GGWCC 3 cut(s) 57, 524, 2000
SmiMI CAYNNNNRTG 4 cut(s) 31, 37, 680, 1895
SmlI CTYRAG 3 cut(s) 890, 1578, 2561
SmoI CTYRAG 3 cut(s) 890, 1578, 2561
SphI GCATGC 2 cut(s) 2135, 2312
SsiI CCGC 4 cut(s) 808, 1488, 1592, 2713
SspMI CTAG 9 cut(s) 194, 501, 510, 965, 2097, 2210, 2315, 2633, 2793
StyD4I CCNGG 4 cut(s) 1425, 1788, 2511, 2796
StyI CCWWGG 3 cut(s) 429, 530, 1956
TaaI ACNGT 7 cut(s) 284, 298, 730, 1417, 1927, 2283, 2597
TaiI ACGT 3 cut(s) 362, 1401, 1512
TatI WGTACW 4 cut(s) 171, 1147, 1412, 1417
TauI GCSGC 1 cut(s) 1594
TfiI GAWTC 7 cut(s) 968, 1475, 1708, 1900, 2172, 2318, 2536
Tru1I TTAA 8 cut(s) 758, 1157, 1284, 1292, 2471, 2592, 2601, 2738
Tru9I TTAA 8 cut(s) 758, 1157, 1284, 1292, 2471, 2592, 2601, 2738
TscAI CASTG 7 cut(s) 301, 733, 964, 1593, 1774, 1932, 2400
TseFI GTSAC 4 cut(s) 995, 1126, 1978, 2089
TseI GCWGC 5 cut(s) 14, 518, 764, 1490, 2516
Tsp45I GTSAC 4 cut(s) 995, 1126, 1978, 2089
TspGWI ACGGA 1 cut(s) 2165
TspRI CASTG 7 cut(s) 301, 733, 964, 1593, 1774, 1932, 2400
Van91I CCANNNNNTGG 1 cut(s) 97
VpaK11BI GGWCC 3 cut(s) 57, 524, 2000
XagI CCTNNNNNAGG 1 cut(s) 519
XapI RAATTY 7 cut(s) 212, 899, 2037, 2060, 2213, 2467, 2703
XbaI TCTAGA 2 cut(s) 964, 2314
XceI RCATGY 2 cut(s) 2135, 2312
XmiI GTMKAC 2 cut(s) 981, 1724
XmnI GAANNNNTTC 3 cut(s) 216, 312, 2040
XspI CTAG 9 cut(s) 194, 501, 510, 965, 2097, 2210, 2315, 2633, 2793
ZrmI AGTACT 1 cut(s) 1414
Zsp2I ATGCAT 1 cut(s) 28
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.