Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0009880

Physical Location & Seq

Genomic Coordinates Reverse (-)

463897 .. 466980

Gene Structure 3084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGGAATGGGGATGGGAATGAGAATGAGAGGAACAAACGCTGCTCTCTGTTTTCTGGCATTTCTTTGGTCTTTCACATGTGTGAATGGGTTGCTTTCTCCCAAAGGTGTAAACTTTGAAGTGCAAGCTTTAATGGGCATCAAGGGCTCTCTGGTGGATCCTCATGGAGTTTTAGATAACTGGGATGATGATTCTGTCGATCCATGTAGCTGGACTATGGTCACTTGCTCTCCTGAAAGCCTAGTTATTGGCCTAGGGACTCCAAGCCAAAGTTTATCAGGCACTCTTTCTCCGAGCATAGGCAACTTAACAAATCTTCAGATTGTGCTATTACAGAACAACAACATAACGGGAGCGATCCCTTTGGAGATTGAGAAGCTCTCAAAGCTACATACACTTGATATTTCCAATAACATGTTTACTGGGGCAGTTCCTTCCTCTTTAGGTCACCTGAGAAGCCTCCAATACTTGAGGCTCAACAATAACAGTCTCAGTGGAGCATTTCCGGTTTCGTTGGCTAACATGAGCCAGCTTGCCTTTCTAGACCTGTCCTACAATAACCTGAGTGGCCCTGTACCTAGATTTGCTGCTAAAACATTCAACATAATTGGAAATCCTCTGATCTGCGCAACGGGGTCTGAAGCAGAATGCAATGGGACGACACTGTTGCCAATGTCGATGAACTTGAATACTACACAAACTGCTCTTCCCGGGGGACCTAAAAGTCACAAAATAGCACTTGCATTTGGTTTGAGCCTAGGGTGCCTCTGCCTGATTGTTCTTGGATTTGGAGCAGTTATATGGTGGAGGCAAAGGCGCAACCAGCAGGCAATCTTCGGTGTTAAAGACCGGCATCACGAGGAAATTTCCCTTGGGAACCTGAAGAGATTCCAGTTCAGAGAACTTCAGAATGCAACACACAACTTCAGCAGCAAGAACATACTAGGAAAAGGTGGATTTGGACATGTCTACAAGGGAACTCTCCAAGATGGGACTTTTATAGCGGTCAAGCGGCTTAAAGATGGCAGTGCACTTGGTGGAGAGATTCAATTCCAGACTGAAGTTGAAATGATCAGCCTAGCAGTTCACCGCAACCTTCTCAGGCTATACGGCTTTTGCATCACACCAACCGAAAGACTTCTAGTTTATCCATACATGTCCAATGGCAGCGTTGCTTCCCGTCTCAAAGGGAAACCGGTCTTGGATTGGGGCACTAGGAAGCGGATTGCCTTGGGAGCTGGAAGAGGATTGTTGTACCTTCATGAGCAGTGTGATCGATCGAAGGTTAGAATAATCCATAGGGATGTGAAGGCTGCAAATATACTTCTTGATGACTACTGTGAAGCTGTGGTGGGAGATTTCGGGTTGGCAAAGCTTCTGGATCACCAAGACTCACATGTCACCACAGCTGTTAGGGGTACTGTGGGGCATATAGCCCCTGAGTACCTCTCCACCGGCCAGTCCTCTGAGAAAACTGATGTTTTCGGATTTGGGATCCTTCTACTTGAACTAATCACAGGCCAGAGAGCACTGGAATTTGGCAAGGCAGCTAACCAGAAAGGAGCAATACTTGATTGGGTTAAAAGGATTCATCAGGAAAAGAAGCTTGAGATGCTTGTGGACAAGGATCTGAAAACCAACTATGACAGGATTGAGCTTGAGGAAATGGTTCAAGTGGCACTCTTGTGCACACAGTACCTTCCCAGCCACAGACCGAAAATGTCTGAAGTGGTAAGGATGCTTGAAGGTGATGGACTTGTGGAAAGATGGGAAGCCTCTCAGAAAGCAGAATCAACAAAGTCCAAAGCCCCCGAGTTCTCGTCCTCGGACAGATACTCCGATCTCACTGACGACTCTTCGCTACTAGTACAAGCAATGGAACTCTCCGGTCCACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008104 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031974 GO:0031981 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0036211 GO:0038023 GO:0040008 GO:0040014 GO:0040015 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045926 GO:0046777 GO:0048519 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051607 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0070727 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

633

Amino Acids

69.29

Weight (kDa)

8.17

Isoelectric Point (pI)

39.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	38 - 77	1.1e-14	Leucine rich repeat N-terminal domain
LRR_14	PF23598	99 - 183	6e-10	Leucine-rich repeat region
LRR_4	PF12799	104 - 138	7e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	129 - 188	1.1e-09	Leucine rich repeat
Pkinase	PF00069	310 - 579	5.9e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	312 - 581	1.2e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16000
fragaria_vesca	FvH4_6g45850 FvH4_6g45850 FvH4_6g45850
malus_domestica	MD09G1079400.v1.1 MD17G1069800.v1.1
prunus_persica	Prupe.3G244900_v2.0.a1
pyrus_communis	pycom09g00620 pycom17g06990
rosa_chinensis	RchiOBHm_Chr2g0164051
rosa_laevigata	RLG00000021435
rosa_multiflora	Rmu_ssc0000432.1_g000008
rosa_roxburghii	Rroxscaffold_2G00086800
rosa_rugosa	Rorug02G0506300 Rorug02G0506300 Rorug02G0506300 Rorug02G0506400
rosa_samantha	Rh2BG585200 Rh2CG556100 Rh2DG594800
rosa_wichuraiana	Rw2G047530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	723, 1397
Acc16I	TGCGCA	1 cut(s)	628
AccB1I	GGYRCC	1 cut(s)	762
AccI	GTMKAC	1 cut(s)	969
AciI	CCGC	4 cut(s)	1004, 1012, 1090, 1222
AclWI	GGATC	8 cut(s)	152, 165, 194, 352, 1389, 1489, 1502, 1635
AcoI	YGGCCR	1 cut(s)	1456
AcsI	RAATTY	2 cut(s)	864, 1535
AcuI	CTGAAG	7 cut(s)	302, 660, 890, 902, 910, 1080, 1746
AdeI	CACNNNGTG	1 cut(s)	1037
AfaI	GTAC	6 cut(s)	576, 1256, 1420, 1445, 1697, 1869
AfiI	CCNNNNNNNGG	2 cut(s)	299, 1893
AflIII	ACRYGT	5 cut(s)	77, 414, 964, 1155, 1396
AgeI	ACCGGT	1 cut(s)	1195
AgsI	TTSAA	8 cut(s)	119, 601, 688, 1049, 1067, 1508, 1673, 1745
AhlI	ACTAGT	1 cut(s)	1864
AjuI	GAANNNNNNNTTGG	4 cut(s)	855, 887, 1184, 1216
AleI	CACNNNNGTG	2 cut(s)	80, 1684
Alw21I	GWGCWC	3 cut(s)	1033, 1531, 1691
Alw26I	GTCTC	2 cut(s)	494, 1187
Alw44I	GTGCAC	2 cut(s)	1029, 1687
AlwI	GGATC	8 cut(s)	152, 165, 194, 352, 1389, 1489, 1502, 1635
Ama87I	CYCGRG	2 cut(s)	710, 1811
AoxI	GGCC	4 cut(s)	250, 568, 1456, 1519
ApaLI	GTGCAC	2 cut(s)	1029, 1687
ApeKI	GCWGC	6 cut(s)	41, 587, 930, 1167, 1313, 1547
ApoI	RAATTY	2 cut(s)	864, 1535
AsiGI	ACCGGT	1 cut(s)	1195
Asp700I	GAANNNNTTC	3 cut(s)	887, 1137, 1668
AspA2I	CCTAGG	2 cut(s)	253, 757
AspLEI	GCGC	2 cut(s)	629, 819
AspS9I	GGNCC	3 cut(s)	569, 716, 1889
AsuC2I	CCSGG	2 cut(s)	711, 712
AsuHPI	GGTGA	5 cut(s)	440, 1079, 1376, 1393, 1760
AvaI	CYCGRG	2 cut(s)	710, 1811
AvaII	GGWCC	2 cut(s)	716, 1889
AvrII	CCTAGG	2 cut(s)	253, 757
BaeGI	GKGCMC	3 cut(s)	1033, 1214, 1691
BamHI	GGATCC	2 cut(s)	157, 1494
BanI	GGYRCC	1 cut(s)	762
BanII	GRGCYC	1 cut(s)	149
BauI	CACGAG	1 cut(s)	857
Bbv12I	GWGCWC	3 cut(s)	1033, 1531, 1691
BbvI	GCAGC	6 cut(s)	28, 574, 942, 1179, 1300, 1559
BccI	CCATC	5 cut(s)	7, 983, 1016, 1745, 1761
BceAI	ACGGC	1 cut(s)	1126
BcgI	CGANNNNNNTGC	4 cut(s)	649, 683, 1256, 1290
BclI	TGATCA	1 cut(s)	1071
BcnI	CCSGG	2 cut(s)	711, 712
BcoDI	GTCTC	2 cut(s)	494, 1187
BcuI	ACTAGT	1 cut(s)	1864
BisI	GCNGC	7 cut(s)	42, 588, 931, 1013, 1168, 1314, 1548
BlnI	CCTAGG	2 cut(s)	253, 757
BlsI	GCNGC	7 cut(s)	43, 589, 932, 1014, 1169, 1315, 1549
Bme1390I	CCNGG	2 cut(s)	711, 712
Bme18I	GGWCC	2 cut(s)	716, 1889
BmeT110I	CYCGRG	2 cut(s)	710, 1811
BmgT120I	GGNCC	3 cut(s)	569, 716, 1889
BmiI	GGNNCC	5 cut(s)	159, 717, 764, 878, 1496
BmrFI	CCNGG	2 cut(s)	711, 712
BmrI	ACTGGG	2 cut(s)	190, 432
BmsI	GCATC	5 cut(s)	147, 862, 1128, 1602, 1728
BmuI	ACTGGG	2 cut(s)	190, 432
BoxI	GACNNNNGTC	1 cut(s)	218
BplI	GAGNNNNNCTC	4 cut(s)	365, 397, 1433, 1465
BpuEI	CTTGAG	3 cut(s)	490, 1628, 1679
BpuMI	CCSGG	2 cut(s)	711, 712
Bsa29I	ATCGAT	1 cut(s)	1276
BsaJI	CCNNGG	8 cut(s)	253, 710, 711, 757, 871, 1230, 1824, 1892
BsaWI	WCCGGW	3 cut(s)	505, 1195, 1886
BsaXI	ACNNNNNCTCC	6 cut(s)	214, 244, 274, 304, 1820, 1850
Bsc4I	CCNNNNNNNGG	2 cut(s)	299, 1893
Bse118I	RCCGGY	3 cut(s)	849, 1195, 1454
Bse1I	ACTGG	5 cut(s)	185, 427, 892, 1459, 1536
Bse3DI	GCAATG	2 cut(s)	658, 1881
BseCI	ATCGAT	1 cut(s)	1276
BseDI	CCNNGG	8 cut(s)	253, 710, 711, 757, 871, 1230, 1824, 1892
BseGI	GGATG	4 cut(s)	18, 190, 1309, 1743
BseLI	CCNNNNNNNGG	2 cut(s)	299, 1893
BseMI	GCAATG	2 cut(s)	658, 1881
BseMII	CTCAG	7 cut(s)	443, 505, 554, 1114, 1431, 1458, 1793
BseNI	ACTGG	5 cut(s)	185, 427, 892, 1459, 1536
BseSI	GKGCMC	3 cut(s)	1033, 1214, 1691
BseXI	GCAGC	6 cut(s)	28, 574, 942, 1179, 1300, 1559
BseYI	CCCAGC	1 cut(s)	1703
Bsh1285I	CGRYCG	1 cut(s)	1280
BshFI	GGCC	4 cut(s)	252, 570, 1458, 1521
BshNI	GGYRCC	1 cut(s)	762
BshTI	ACCGGT	1 cut(s)	1195
BshVI	ATCGAT	1 cut(s)	1276
BsiEI	CGRYCG	1 cut(s)	1280
BsiHKAI	GWGCWC	3 cut(s)	1033, 1531, 1691
BsiHKCI	CYCGRG	2 cut(s)	710, 1811
BsiSI	CCGG	6 cut(s)	506, 711, 850, 1196, 1455, 1887
BslFI	GGGAC	4 cut(s)	271, 670, 729, 1006
BslI	CCNNNNNNNGG	2 cut(s)	299, 1893
BsmAI	GTCTC	2 cut(s)	494, 1187
BsmBI	CGTCTC	1 cut(s)	1187
BsmFI	GGGAC	4 cut(s)	271, 670, 729, 1006
BsmI	GAATGC	2 cut(s)	653, 916
BsnI	GGCC	4 cut(s)	252, 570, 1458, 1521
BsoBI	CYCGRG	2 cut(s)	710, 1811
Bsp1286I	GDGCHC	5 cut(s)	149, 1033, 1214, 1531, 1691
BspACI	CCGC	4 cut(s)	1004, 1012, 1090, 1222
BspANI	GGCC	4 cut(s)	252, 570, 1458, 1521
BspCNI	CTCAG	7 cut(s)	444, 504, 555, 1113, 1432, 1459, 1792
BspDI	ATCGAT	1 cut(s)	1276
BspHI	TCATGA	1 cut(s)	1261
BspLI	GGNNCC	5 cut(s)	159, 717, 764, 878, 1496
BspPI	GGATC	8 cut(s)	152, 165, 194, 352, 1389, 1489, 1502, 1635
BspQI	GCTCTTC	1 cut(s)	711
BspT107I	GGYRCC	1 cut(s)	762
BsrDI	GCAATG	2 cut(s)	658, 1881
BsrFI	RCCGGY	3 cut(s)	849, 1195, 1454
BsrI	ACTGG	5 cut(s)	185, 427, 892, 1459, 1536
BssAI	RCCGGY	3 cut(s)	849, 1195, 1454
BssECI	CCNNGG	8 cut(s)	253, 710, 711, 757, 871, 1230, 1824, 1892
BssSI	CACGAG	1 cut(s)	857
BssT1I	CCWWGG	4 cut(s)	253, 757, 871, 1230
Bst2BI	CACGAG	1 cut(s)	857
Bst4CI	ACNGT	6 cut(s)	488, 666, 1340, 1423, 1695, 1896
Bst6I	CTCTTC	4 cut(s)	711, 878, 1237, 1861
BstC8I	GCNNGC	4 cut(s)	126, 530, 534, 828
BstDEI	CTNAG	7 cut(s)	452, 491, 563, 1100, 1440, 1467, 1779
BstDSI	CCRYGG	1 cut(s)	1892
BstEII	GGTNACC	1 cut(s)	446
BstF5I	GGATG	4 cut(s)	18, 190, 1309, 1743
BstHHI	GCGC	2 cut(s)	629, 819
BstMAI	GTCTC	2 cut(s)	494, 1187
BstMCI	CGRYCG	1 cut(s)	1280
BstMWI	GCNNNNNNNGC	6 cut(s)	144, 385, 762, 823, 1235, 1612
BstNSI	RCATGY	5 cut(s)	81, 418, 968, 1159, 1400
BstPAI	GACNNNNGTC	1 cut(s)	218
BstPI	GGTNACC	1 cut(s)	446
BstSCI	CCNGG	2 cut(s)	709, 710
BstSLI	GKGCMC	3 cut(s)	1033, 1214, 1691
BstV1I	GCAGC	6 cut(s)	28, 574, 942, 1179, 1300, 1559
BstX2I	RGATCY	3 cut(s)	157, 1494, 1627
BstXI	CCANNNNNNTGG	1 cut(s)	210
BstYI	RGATCY	3 cut(s)	157, 1494, 1627
Bsu15I	ATCGAT	1 cut(s)	1276
BsuRI	GGCC	4 cut(s)	252, 570, 1458, 1521
BsuTUI	ATCGAT	1 cut(s)	1276
BtgI	CCRYGG	1 cut(s)	1892
BtsCI	GGATG	4 cut(s)	18, 190, 1309, 1743
BtsI	GCAGTG	2 cut(s)	1033, 1274
BtsIMutI	CAGTG	6 cut(s)	499, 662, 1033, 1274, 1529, 1845
Cac8I	GCNNGC	4 cut(s)	126, 530, 534, 828
CciI	TCATGA	1 cut(s)	1261
CfoI	GCGC	2 cut(s)	629, 819
Cfr10I	RCCGGY	3 cut(s)	849, 1195, 1454
Cfr13I	GGNCC	3 cut(s)	569, 716, 1889
Cfr9I	CCCGGG	1 cut(s)	710
ClaI	ATCGAT	1 cut(s)	1276
Csp6I	GTAC	6 cut(s)	575, 1255, 1419, 1444, 1696, 1868
CspAI	ACCGGT	1 cut(s)	1195
CviAII	CATG	9 cut(s)	78, 164, 204, 415, 523, 965, 1156, 1262, 1397
CviQI	GTAC	6 cut(s)	575, 1255, 1419, 1444, 1696, 1868
DdeI	CTNAG	7 cut(s)	452, 491, 563, 1100, 1440, 1467, 1779
DraIII	CACNNNGTG	1 cut(s)	1037
DrdI	GACNNNNNNGTC	2 cut(s)	723, 1397
DseDI	GACNNNNNNGTC	2 cut(s)	723, 1397
EaeI	YGGCCR	1 cut(s)	1456
Eam1104I	CTCTTC	4 cut(s)	711, 878, 1237, 1861
EarI	CTCTTC	4 cut(s)	711, 878, 1237, 1861
Eco130I	CCWWGG	4 cut(s)	253, 757, 871, 1230
Eco24I	GRGCYC	1 cut(s)	149
Eco47I	GGWCC	2 cut(s)	716, 1889
Eco57I	CTGAAG	7 cut(s)	302, 660, 890, 902, 910, 1080, 1746
Eco88I	CYCGRG	2 cut(s)	710, 1811
Eco91I	GGTNACC	1 cut(s)	446
EcoO109I	RGGNCCY	1 cut(s)	716
EcoO65I	GGTNACC	1 cut(s)	446
EcoT14I	CCWWGG	4 cut(s)	253, 757, 871, 1230
EcoT38I	GRGCYC	1 cut(s)	149
ErhI	CCWWGG	4 cut(s)	253, 757, 871, 1230
Esp3I	CGTCTC	1 cut(s)	1187
FaeI	CATG	9 cut(s)	81, 167, 207, 418, 526, 968, 1159, 1265, 1400
FaqI	GGGAC	4 cut(s)	271, 670, 729, 1006
FatI	CATG	9 cut(s)	77, 163, 203, 414, 522, 964, 1155, 1261, 1396
FbaI	TGATCA	1 cut(s)	1071
FblI	GTMKAC	1 cut(s)	969
Fnu4HI	GCNGC	7 cut(s)	42, 588, 931, 1013, 1168, 1314, 1548
FokI	GGATG	4 cut(s)	25, 197, 1316, 1750
FriOI	GRGCYC	1 cut(s)	149
Fsp4HI	GCNGC	7 cut(s)	42, 588, 931, 1013, 1168, 1314, 1548
FspI	TGCGCA	1 cut(s)	628
GlaI	GCGC	2 cut(s)	628, 818
GluI	GCNGC	7 cut(s)	42, 588, 931, 1013, 1168, 1314, 1548
GsaI	CCCAGC	1 cut(s)	1707
HaeIII	GGCC	4 cut(s)	252, 570, 1458, 1521
HapII	CCGG	6 cut(s)	506, 711, 850, 1196, 1455, 1887
HhaI	GCGC	2 cut(s)	629, 819
Hin1II	CATG	9 cut(s)	81, 167, 207, 418, 526, 968, 1159, 1265, 1400
Hin6I	GCGC	2 cut(s)	627, 817
HinP1I	GCGC	2 cut(s)	627, 817
HindIII	AAGCTT	3 cut(s)	126, 1373, 1604
HinfI	GANTC	8 cut(s)	191, 259, 888, 1045, 1391, 1588, 1790, 1853
HpaII	CCGG	6 cut(s)	506, 711, 850, 1196, 1455, 1887
HphI	GGTGA	5 cut(s)	440, 1079, 1376, 1393, 1760
Hpy166II	GTNNAC	8 cut(s)	112, 420, 970, 1031, 1087, 1621, 1689, 1892
Hpy188III	TCNNGA	8 cut(s)	233, 542, 857, 1054, 1262, 1328, 1379, 1595
Hpy8I	GTNNAC	8 cut(s)	112, 420, 970, 1031, 1087, 1621, 1689, 1892
HpyAV	CCTTC	8 cut(s)	444, 1106, 1268, 1276, 1303, 1508, 1709, 1739
HpyCH4III	ACNGT	6 cut(s)	488, 666, 1340, 1423, 1695, 1896
HpyCH4V	TGCA	8 cut(s)	124, 651, 743, 914, 1031, 1119, 1316, 1689
HpyF10VI	GCNNNNNNNGC	6 cut(s)	144, 385, 762, 823, 1235, 1612
HpyF3I	CTNAG	7 cut(s)	452, 491, 563, 1100, 1440, 1467, 1779
Hsp92II	CATG	9 cut(s)	81, 167, 207, 418, 526, 968, 1159, 1265, 1400
HspAI	GCGC	2 cut(s)	627, 817
Ksp22I	TGATCA	1 cut(s)	1071
LguI	GCTCTTC	1 cut(s)	711
LmnI	GCTCC	5 cut(s)	353, 497, 791, 1235, 1562
Lsp1109I	GCAGC	6 cut(s)	28, 574, 942, 1179, 1300, 1559
LweI	GCATC	5 cut(s)	147, 862, 1128, 1602, 1728
MaeIII	GTNAC	4 cut(s)	220, 446, 725, 1399
MboII	GAAGA	6 cut(s)	308, 698, 826, 895, 1254, 1848
MflI	RGATCY	3 cut(s)	157, 1494, 1627
MhlI	GDGCHC	5 cut(s)	149, 1033, 1214, 1531, 1691
MluCI	AATT	4 cut(s)	606, 864, 1049, 1535
MlyI	GAGTC	3 cut(s)	253, 1385, 1847
MroXI	GAANNNNTTC	3 cut(s)	887, 1137, 1668
MseI	TTAA	5 cut(s)	131, 308, 843, 1017, 1581
MslI	CAYNNNNRTG	3 cut(s)	80, 1302, 1684
MspA1I	CMGCKG	1 cut(s)	1409
MspI	CCGG	6 cut(s)	506, 711, 850, 1196, 1455, 1887
MspR9I	CCNGG	2 cut(s)	711, 712
Mva1269I	GAATGC	2 cut(s)	653, 916
MwoI	GCNNNNNNNGC	6 cut(s)	144, 385, 762, 823, 1235, 1612
NciI	CCSGG	2 cut(s)	711, 712
NlaIII	CATG	9 cut(s)	81, 167, 207, 418, 526, 968, 1159, 1265, 1400
NlaIV	GGNNCC	5 cut(s)	159, 717, 764, 878, 1496
NmuCI	GTSAC	4 cut(s)	220, 446, 725, 1399
NsbI	TGCGCA	1 cut(s)	628
NspI	RCATGY	5 cut(s)	81, 418, 968, 1159, 1400
OliI	CACNNNNGTG	2 cut(s)	80, 1684
PagI	TCATGA	1 cut(s)	1261
PciI	ACATGT	5 cut(s)	77, 414, 964, 1155, 1396
PciSI	GCTCTTC	1 cut(s)	711
PctI	GAATGC	2 cut(s)	653, 916
PdmI	GAANNNNTTC	3 cut(s)	887, 1137, 1668
PfeI	GAWTC	5 cut(s)	191, 888, 1045, 1588, 1790
PinAI	ACCGGT	1 cut(s)	1195
PkrI	GCNGC	7 cut(s)	43, 589, 932, 1014, 1169, 1315, 1549
Ple19I	CGATCG	1 cut(s)	1280
PleI	GAGTC	3 cut(s)	253, 1385, 1847
PpsI	GAGTC	3 cut(s)	253, 1385, 1847
PpuMI	RGGWCCY	1 cut(s)	716
PscI	ACATGT	5 cut(s)	77, 414, 964, 1155, 1396
PshAI	GACNNNNGTC	1 cut(s)	218
Psp5II	RGGWCCY	1 cut(s)	716
PspEI	GGTNACC	1 cut(s)	446
PspFI	CCCAGC	1 cut(s)	1703
PspN4I	GGNNCC	5 cut(s)	159, 717, 764, 878, 1496
PspPI	GGNCC	3 cut(s)	569, 716, 1889
PspPPI	RGGWCCY	1 cut(s)	716
PsuI	RGATCY	3 cut(s)	157, 1494, 1627
PvuI	CGATCG	1 cut(s)	1280
PvuII	CAGCTG	1 cut(s)	1409
RsaI	GTAC	6 cut(s)	576, 1256, 1420, 1445, 1697, 1869
RsaNI	GTAC	6 cut(s)	575, 1255, 1419, 1444, 1696, 1868
RseI	CAYNNNNRTG	3 cut(s)	80, 1302, 1684
SapI	GCTCTTC	1 cut(s)	711
SaqAI	TTAA	5 cut(s)	131, 308, 843, 1017, 1581
SatI	GCNGC	7 cut(s)	42, 588, 931, 1013, 1168, 1314, 1548
Sau96I	GGNCC	3 cut(s)	569, 716, 1889
SchI	GAGTC	3 cut(s)	253, 1385, 1847
ScrFI	CCNGG	2 cut(s)	711, 712
SduI	GDGCHC	5 cut(s)	149, 1033, 1214, 1531, 1691
SfaNI	GCATC	5 cut(s)	147, 862, 1128, 1602, 1728
SinI	GGWCC	2 cut(s)	716, 1889
SmaI	CCCGGG	1 cut(s)	712
SmiMI	CAYNNNNRTG	3 cut(s)	80, 1302, 1684
SmlI	CTYRAG	3 cut(s)	469, 1607, 1658
SmoI	CTYRAG	3 cut(s)	469, 1607, 1658
SpeI	ACTAGT	1 cut(s)	1864
Sse9I	AATT	4 cut(s)	606, 864, 1049, 1535
SsiI	CCGC	4 cut(s)	1004, 1012, 1090, 1222
StyD4I	CCNGG	2 cut(s)	709, 710
StyI	CCWWGG	4 cut(s)	253, 757, 871, 1230
TaaI	ACNGT	6 cut(s)	488, 666, 1340, 1423, 1695, 1896
TaqI	TCGA	4 cut(s)	198, 677, 1276, 1280
TaqII	GACCGA	1 cut(s)	1729
TasI	AATT	4 cut(s)	606, 864, 1049, 1535
TatI	WGTACW	1 cut(s)	1867
TauI	GCSGC	1 cut(s)	1015
TfiI	GAWTC	5 cut(s)	191, 888, 1045, 1588, 1790
Tru1I	TTAA	5 cut(s)	131, 308, 843, 1017, 1581
Tru9I	TTAA	5 cut(s)	131, 308, 843, 1017, 1581
TscAI	CASTG	6 cut(s)	499, 669, 1033, 1274, 1536, 1852
TseFI	GTSAC	4 cut(s)	220, 446, 725, 1399
TseI	GCWGC	6 cut(s)	41, 587, 930, 1167, 1313, 1547
Tsp45I	GTSAC	4 cut(s)	220, 446, 725, 1399
TspDTI	ATGAA	3 cut(s)	695, 1250, 1580
TspMI	CCCGGG	1 cut(s)	710
TspRI	CASTG	6 cut(s)	499, 669, 1033, 1274, 1536, 1852
VneI	GTGCAC	2 cut(s)	1029, 1687
VpaK11BI	GGWCC	2 cut(s)	716, 1889
XapI	RAATTY	2 cut(s)	864, 1535
XbaI	TCTAGA	1 cut(s)	541
XceI	RCATGY	5 cut(s)	81, 418, 968, 1159, 1400
XmaI	CCCGGG	1 cut(s)	710
XmaJI	CCTAGG	2 cut(s)	253, 757
XmiI	GTMKAC	1 cut(s)	969
XmnI	GAANNNNTTC	3 cut(s)	887, 1137, 1668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.