Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0009880

Physical Location & Seq

Genomic Coordinates Reverse (-)

8982105 .. 8987149

Gene Structure 5045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00086800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGGAATGGGAGGAGCAAAAGCTGTTCTATGTTTTGTGGCATTTGTGTGGTATTGGACTTGTGGGAATGGATTGCTTTCGCCTAAAGGTGTAAACTTTGAAGTTCAAGCTTTGATGGGCATAAAGGAAGCTCTGGAGGATCCTCATGGTGTTCTAGGTAATTGGGATTATGATGCTGTTGATCCATGTAGCTGGACTATGGTCACTTGCTCTTCTGAAAACCTCGTTGTTGGCCTAGGAGTTCCTAGCCAGAATTTATCAGGCACTCTTTCTCCAAGCATAGGAAACTTGACAAATCTTCAGATTGTGTGTGGTGGTGTGCACAGTCTCTTACAGAACAACAACATAACAGGACCAATCCCTCAGGACATTGGGAAGCTCTCAAAGCTTAAGACTCTTGATGTTTCCAGCAACTTCTTCACTGGGGGAATTCCCTCCTCTTTGGGTCACCTGAAAAGCCTCCAGTACTTGAGGCTCAACAATAACAGTCTCACTGGAGCATTTCCGATGTCGTTGGCTAACATGACCAACCTTGCCTTCCTGGACCTGTCCTACAATAATCTGAGTGGCCCTGTGCCTAGATTTGCTGCTAAAACATTCAACATAGTTGGAAACCCGCTGATCTGTGCAACCGGGTCAGAAGCAGACTGCAATGGGATGGAACTGATGCCAATGTCCATGAACTTGAATAATACACAGGCCGCTCTTCCTGACAAACCTAAAAGTCGCAAAATGGCACTTGCTTTTGGTTTGAGCCTCGGATGCCTCTGCCTGATTGTTCTTGGATTTGGAGTAGTTATATGGTGGAGGCAAAGGCGCTATAAACAGGCATTCTTTGATGTTAAAGACAAGCATCATGAAGAAATTTCGCTTGGAAACTTGAAGAGATTTCATTTCAGAGAACTTCAGATTGCAACAAATAACTTCAGCAGCAAATACCTACTAGGAAAGGGAGGCTTTGGACATGTTTACAAAGGAACTCTCTGCGATGGCACGGTCGTAGCAGTCAAGAGACTTAAAGATGGCAGTGCTCTTGGTGGAGAGATTCAATTCCAGACTGAAGTTGAAATGATCAGCCTAGCAGTTCATCGCAACCTTCTCCGGCTTTATGGGTTTTGCATCACTCCAACAGAAAGACTTCTAGTTTACCCATACATGTCCAATGGCAGTGTGGCTTCTCGTCTCAAAGGGAAACCAGTGTTGGATTGGGGCACTAGGAAACGGATTGCCTTAGGAGCTGCAAGAGGATTGTTATACCTTCATGAGCAGTGTGACCCGAAAATTATCCACAGGGATGTGAAGGCAGCAAATGTACTTCTTGATGACTACTGTGAAGCTGTGGTCGGAGATTTTGATTTGGCAAAGCTTTTGGATCACCAAGATTCACATGTCACCACCGCAGTGAGGGGTACCATAGGGCACATAGCTCCAGAGTATCTTTCCACAGGCCAGTCTTCTGATAAAACAGATGTCTTTGGATTCGGTATTCTTCTCCTTGAACTTATCACAGGCCAGACAGCTCTAGAATTTGCCAAGTCAACTAGCCAAAAAGGAGCCATACTTGATTGGGTTAAGAAGCTGCATCAGGAAAAGAAGCTTGAAATGCTAGTGGACAAGGATCTTGATACTAACTATGATCGCATTGAGCTTGAAGAAATGATTCAAGTTGCACTCTTGTGTACTCAGTACCTTCCTGGTCATAGACCCAGAATGTCTGAAGTGGTCAGAATGCTAGAAGGTGATGGACTTGTGGAAAGATGGGAAGCATCTCAAAGAGCTGAATCAACAAAGTCCAAAGCTTACTTTTCATCATCCGATCGATACTCGGATCTTACTGATGACTCTTCATTATTAGTACAAGCAATGGAACTCTCAGACCTCACTCTCCTACTATTCTCATCTCGTCGCCTAATCCTACCGTTGCACTCGTCCAATCCCGCTACTCGCACCATATTCGTCAAGTTCGCTACTACGCACTCATCATTGCCTAATCCTCGCTATTGCACTCGTCTAATCCTGCTCCGCACTCGCTGCACTCATACTCCTTCTAGTTATGCTACCGCCCTCAAACTCGTGTTCTGCTACTTCACTCGTCATCGCCTAATGCCGCTACGCATTCATCCAATCTTGCTACCGCAATCGTCCAATCTCGCTACACTCATACTCTTCCAATTCGCTACGCACTTGTACTCGTGTCCGATTCGCTACTCGTGTTCTGCAACCGCACCCGTCATCGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008104 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031974 GO:0031981 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0036211 GO:0038023 GO:0040008 GO:0040014 GO:0040015 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045926 GO:0046777 GO:0048519 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051607 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0070727 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

746

Amino Acids

82.44

Weight (kDa)

8.69

Isoelectric Point (pI)

35.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 71	3.8e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	118 - 183	9.6e-08	Leucine-rich repeat region
LRR_8	PF13855	129 - 188	3.8e-09	Leucine rich repeat
LRR_4	PF12799	152 - 189	4.5e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	311 - 575	1.8e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	314 - 578	4.8e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16000
fragaria_vesca	FvH4_6g45850 FvH4_6g45850 FvH4_6g45850
malus_domestica	MD09G1079400.v1.1 MD17G1069800.v1.1
prunus_persica	Prupe.3G244900_v2.0.a1
pyrus_communis	pycom09g00620 pycom17g06990
rosa_chinensis	RchiOBHm_Chr2g0164051
rosa_laevigata	RLG00000021435
rosa_multiflora	Rmu_ssc0000432.1_g000008
rosa_roxburghii	Rroxscaffold_2G00086800
rosa_rugosa	Rorug02G0506300 Rorug02G0506300 Rorug02G0506300 Rorug02G0506400
rosa_samantha	Rh2BG585200 Rh2CG556100 Rh2DG594800
rosa_wichuraiana	Rw2G047530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1409
AccB1I	GGYRCC	1 cut(s)	1409
AccBSI	CCGCTC	1 cut(s)	704
AciI	CCGC	9 cut(s)	617, 702, 1398, 1938, 2023, 2061, 2108, 2135, 2223
AclWI	GGATC	6 cut(s)	134, 147, 176, 1380, 1626, 1836
AcsI	RAATTY	4 cut(s)	253, 429, 864, 1526
AcuI	CTGAAG	5 cut(s)	284, 890, 910, 1080, 1737
AfaI	GTAC	7 cut(s)	467, 1314, 1411, 1681, 1688, 1857, 2189
AfiI	CCNNNNNNNGG	2 cut(s)	281, 1404
AflII	CTTAAG	1 cut(s)	389
AflIII	ACRYGT	3 cut(s)	964, 1155, 1387
AjnI	CCWGG	2 cut(s)	540, 1693
AjuI	GAANNNNNNNTTGG	6 cut(s)	521, 553, 855, 887, 1184, 1216
AleI	CACNNNNGTG	2 cut(s)	1400, 1675
Alw21I	GWGCWC	2 cut(s)	324, 1033
Alw26I	GTCTC	4 cut(s)	332, 494, 1006, 1187
Alw44I	GTGCAC	1 cut(s)	320
AlwI	GGATC	6 cut(s)	134, 147, 176, 1380, 1626, 1836
AoxI	GGCC	5 cut(s)	232, 568, 699, 1447, 1510
ApaLI	GTGCAC	1 cut(s)	320
ApeKI	GCWGC	6 cut(s)	587, 930, 1238, 1304, 1579, 2031
ApoI	RAATTY	4 cut(s)	253, 429, 864, 1526
Asp700I	GAANNNNTTC	2 cut(s)	1137, 1659
Asp718I	GGTACC	1 cut(s)	1409
AspA2I	CCTAGG	1 cut(s)	235
AspLEI	GCGC	1 cut(s)	819
AspS9I	GGNCC	3 cut(s)	353, 544, 569
AsuC2I	CCSGG	1 cut(s)	634
AsuHPI	GGTGA	4 cut(s)	440, 1367, 1384, 1751
AvaII	GGWCC	2 cut(s)	353, 544
AvrII	CCTAGG	1 cut(s)	235
AxyI	CCTNAGG	2 cut(s)	363, 1231
BaeGI	GKGCMC	3 cut(s)	324, 1214, 1422
BamHI	GGATCC	1 cut(s)	139
BanI	GGYRCC	1 cut(s)	1409
BauI	CACGAG	3 cut(s)	2072, 2191, 2209
BbsI	GAAGAC	1 cut(s)	1446
Bbv12I	GWGCWC	2 cut(s)	324, 1033
BbvI	GCAGC	6 cut(s)	574, 942, 1225, 1316, 1566, 2018
BccI	CCATC	6 cut(s)	109, 652, 983, 1016, 1736, 1752
BcgI	CGANNNNNNTGC	2 cut(s)	1936, 1970
BciT130I	CCWGG	2 cut(s)	542, 1695
BclI	TGATCA	1 cut(s)	1071
BcnI	CCSGG	1 cut(s)	634
BcoDI	GTCTC	4 cut(s)	332, 494, 1006, 1187
BfoI	RGCGCY	1 cut(s)	820
BfrI	CTTAAG	1 cut(s)	389
BisI	GCNGC	8 cut(s)	588, 702, 931, 1239, 1305, 1580, 2032, 2108
BlnI	CCTAGG	1 cut(s)	235
BlsI	GCNGC	8 cut(s)	589, 703, 932, 1240, 1306, 1581, 2033, 2109
BmcAI	AGTACT	1 cut(s)	467
Bme1390I	CCNGG	3 cut(s)	542, 634, 1695
Bme18I	GGWCC	2 cut(s)	353, 544
BmgT120I	GGNCC	3 cut(s)	353, 544, 569
BmiI	GGNNCC	3 cut(s)	141, 1411, 1555
BmrFI	CCNGG	3 cut(s)	542, 634, 1695
BmrI	ACTGGG	1 cut(s)	432
BmsI	GCATC	7 cut(s)	163, 657, 752, 862, 1128, 1591, 1775
BmuI	ACTGGG	1 cut(s)	432
BoxI	GACNNNNGTC	1 cut(s)	200
BpiI	GAAGAC	1 cut(s)	1446
BpmI	CTGGAG	4 cut(s)	155, 446, 516, 1413
BpuEI	CTTGAG	1 cut(s)	490
BpuMI	CCSGG	1 cut(s)	634
Bsa29I	ATCGAT	1 cut(s)	1819
BsaJI	CCNNGG	2 cut(s)	235, 757
BsaXI	ACNNNNNCTCC	4 cut(s)	256, 286, 2026, 2056
Bsc4I	CCNNNNNNNGG	2 cut(s)	281, 1404
Bse1I	ACTGG	5 cut(s)	427, 463, 499, 1196, 1450
Bse21I	CCTNAGG	2 cut(s)	363, 1231
Bse3DI	GCAATG	3 cut(s)	658, 1869, 1982
BseBI	CCWGG	2 cut(s)	542, 1695
BseCI	ATCGAT	1 cut(s)	1819
BseDI	CCNNGG	2 cut(s)	235, 757
BseGI	GGATG	5 cut(s)	663, 767, 1300, 1811, 2119
BseLI	CCNNNNNNNGG	2 cut(s)	281, 1404
BseMI	GCAATG	3 cut(s)	658, 1869, 1982
BseMII	CTCAG	4 cut(s)	377, 554, 1697, 1887
BseNI	ACTGG	5 cut(s)	427, 463, 499, 1196, 1450
BseRI	GAGGAG	2 cut(s)	27, 427
BseSI	GKGCMC	3 cut(s)	324, 1214, 1422
BseXI	GCAGC	6 cut(s)	574, 942, 1225, 1316, 1566, 2018
BsgI	GTGCAG	1 cut(s)	2017
Bsh1285I	CGRYCG	2 cut(s)	999, 1819
BshFI	GGCC	5 cut(s)	234, 570, 701, 1449, 1512
BshNI	GGYRCC	1 cut(s)	1409
BshVI	ATCGAT	1 cut(s)	1819
BsiEI	CGRYCG	2 cut(s)	999, 1819
BsiHKAI	GWGCWC	2 cut(s)	324, 1033
BsiSI	CCGG	2 cut(s)	633, 1102
BslI	CCNNNNNNNGG	2 cut(s)	281, 1404
BsmAI	GTCTC	4 cut(s)	332, 494, 1006, 1187
BsmBI	CGTCTC	1 cut(s)	1187
BsmI	GAATGC	3 cut(s)	830, 1734, 2115
BsnI	GGCC	5 cut(s)	234, 570, 701, 1449, 1512
Bsp1286I	GDGCHC	4 cut(s)	324, 1033, 1214, 1422
Bsp143I	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
BspACI	CCGC	9 cut(s)	617, 702, 1398, 1938, 2023, 2061, 2108, 2135, 2223
BspANI	GGCC	5 cut(s)	234, 570, 701, 1449, 1512
BspCNI	CTCAG	4 cut(s)	376, 555, 1696, 1886
BspDI	ATCGAT	1 cut(s)	1819
BspHI	TCATGA	2 cut(s)	856, 1261
BspLI	GGNNCC	3 cut(s)	141, 1411, 1555
BspPI	GGATC	6 cut(s)	134, 147, 176, 1380, 1626, 1836
BspQI	GCTCTTC	2 cut(s)	217, 711
BspT107I	GGYRCC	1 cut(s)	1409
BspTI	CTTAAG	1 cut(s)	389
BsrBI	CCGCTC	1 cut(s)	704
BsrDI	GCAATG	3 cut(s)	658, 1869, 1982
BsrI	ACTGG	5 cut(s)	427, 463, 499, 1196, 1450
BssECI	CCNNGG	2 cut(s)	235, 757
BssMI	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
BssSI	CACGAG	3 cut(s)	2072, 2191, 2209
BssT1I	CCWWGG	1 cut(s)	235
Bst2BI	CACGAG	3 cut(s)	2072, 2191, 2209
Bst2UI	CCWGG	2 cut(s)	542, 1695
Bst4CI	ACNGT	5 cut(s)	326, 488, 997, 1331, 1920
Bst6I	CTCTTC	5 cut(s)	217, 711, 878, 1849, 2171
BstAFI	CTTAAG	1 cut(s)	389
BstAPI	GCANNNNNTGC	1 cut(s)	2031
BstDEI	CTNAG	5 cut(s)	363, 563, 1231, 1683, 1873
BstEII	GGTNACC	1 cut(s)	446
BstF5I	GGATG	5 cut(s)	663, 767, 1300, 1811, 2119
BstH2I	RGCGCY	1 cut(s)	820
BstHHI	GCGC	1 cut(s)	819
BstKTI	GATC	9 cut(s)	142, 184, 624, 1074, 1375, 1621, 1639, 1819, 1831
BstMAI	GTCTC	4 cut(s)	332, 494, 1006, 1187
BstMBI	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
BstMCI	CGRYCG	2 cut(s)	999, 1819
BstMWI	GCNNNNNNNGC	5 cut(s)	385, 762, 1235, 1603, 2031
BstNI	CCWGG	2 cut(s)	542, 1695
BstNSI	RCATGY	3 cut(s)	968, 1159, 1391
BstPAI	GACNNNNGTC	1 cut(s)	200
BstPI	GGTNACC	1 cut(s)	446
BstSCI	CCNGG	3 cut(s)	540, 632, 1693
BstSLI	GKGCMC	3 cut(s)	324, 1214, 1422
BstV1I	GCAGC	6 cut(s)	574, 942, 1225, 1316, 1566, 2018
BstV2I	GAAGAC	1 cut(s)	1446
BstX2I	RGATCY	3 cut(s)	139, 1618, 1828
BstXI	CCANNNNNNTGG	1 cut(s)	192
BstYI	RGATCY	3 cut(s)	139, 1618, 1828
Bsu15I	ATCGAT	1 cut(s)	1819
Bsu36I	CCTNAGG	2 cut(s)	363, 1231
BsuRI	GGCC	5 cut(s)	234, 570, 701, 1449, 1512
BsuTUI	ATCGAT	1 cut(s)	1819
BtgZI	GCGATG	4 cut(s)	1002, 1073, 2081, 2218
BtsCI	GGATG	5 cut(s)	663, 767, 1300, 1811, 2119
BtsI	GCAGTG	4 cut(s)	1033, 1174, 1274, 1407
BtsIMutI	CAGTG	7 cut(s)	420, 492, 1033, 1174, 1203, 1274, 1407
CciI	TCATGA	2 cut(s)	856, 1261
CfoI	GCGC	1 cut(s)	819
Cfr13I	GGNCC	3 cut(s)	353, 544, 569
ClaI	ATCGAT	1 cut(s)	1819
Csp6I	GTAC	7 cut(s)	466, 1313, 1410, 1680, 1687, 1856, 2188
CviAII	CATG	9 cut(s)	146, 186, 523, 679, 857, 965, 1156, 1262, 1388
CviQI	GTAC	7 cut(s)	466, 1313, 1410, 1680, 1687, 1856, 2188
DdeI	CTNAG	5 cut(s)	363, 563, 1231, 1683, 1873
DpnI	GATC	9 cut(s)	141, 183, 623, 1073, 1374, 1620, 1638, 1818, 1830
DpnII	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
Eam1104I	CTCTTC	5 cut(s)	217, 711, 878, 1849, 2171
EarI	CTCTTC	5 cut(s)	217, 711, 878, 1849, 2171
Eco130I	CCWWGG	1 cut(s)	235
Eco47I	GGWCC	2 cut(s)	353, 544
Eco57I	CTGAAG	5 cut(s)	284, 890, 910, 1080, 1737
Eco81I	CCTNAGG	2 cut(s)	363, 1231
Eco91I	GGTNACC	1 cut(s)	446
EcoO65I	GGTNACC	1 cut(s)	446
EcoRI	GAATTC	1 cut(s)	429
EcoRII	CCWGG	2 cut(s)	540, 1693
EcoT14I	CCWWGG	1 cut(s)	235
ErhI	CCWWGG	1 cut(s)	235
Esp3I	CGTCTC	1 cut(s)	1187
FaeI	CATG	9 cut(s)	149, 189, 526, 682, 860, 968, 1159, 1265, 1391
FalI	AAGNNNNNCTT	2 cut(s)	941, 973
FatI	CATG	9 cut(s)	145, 185, 522, 678, 856, 964, 1155, 1261, 1387
FauI	CCCGC	2 cut(s)	624, 1945
FbaI	TGATCA	1 cut(s)	1071
Fnu4HI	GCNGC	8 cut(s)	588, 702, 931, 1239, 1305, 1580, 2032, 2108
FokI	GGATG	5 cut(s)	670, 774, 1307, 1798, 2106
Fsp4HI	GCNGC	8 cut(s)	588, 702, 931, 1239, 1305, 1580, 2032, 2108
GlaI	GCGC	1 cut(s)	818
GluI	GCNGC	8 cut(s)	588, 702, 931, 1239, 1305, 1580, 2032, 2108
GsuI	CTGGAG	4 cut(s)	155, 446, 516, 1413
HaeII	RGCGCY	1 cut(s)	820
HaeIII	GGCC	5 cut(s)	234, 570, 701, 1449, 1512
HapII	CCGG	2 cut(s)	633, 1102
HhaI	GCGC	1 cut(s)	819
Hin1II	CATG	9 cut(s)	149, 189, 526, 682, 860, 968, 1159, 1265, 1391
Hin6I	GCGC	1 cut(s)	817
HinP1I	GCGC	1 cut(s)	817
HincII	GTYRAC	1 cut(s)	1539
HindII	GTYRAC	1 cut(s)	1539
HindIII	AAGCTT	5 cut(s)	108, 386, 1364, 1595, 1797
HinfI	GANTC	8 cut(s)	394, 1045, 1382, 1479, 1660, 1781, 1841, 2200
HpaII	CCGG	2 cut(s)	633, 1102
HphI	GGTGA	4 cut(s)	440, 1367, 1384, 1751
Hpy166II	GTNNAC	7 cut(s)	94, 322, 970, 1147, 1539, 1612, 1680
Hpy8I	GTNNAC	7 cut(s)	94, 322, 970, 1147, 1539, 1612, 1680
Hpy99I	CGWCG	1 cut(s)	1908
HpyAV	CCTTC	7 cut(s)	547, 1106, 1268, 1294, 1700, 1730, 2055
HpyCH4III	ACNGT	5 cut(s)	326, 488, 997, 1331, 1920
HpyF10VI	GCNNNNNNNGC	5 cut(s)	385, 762, 1235, 1603, 2031
HpyF3I	CTNAG	5 cut(s)	363, 563, 1231, 1683, 1873
Hsp92II	CATG	9 cut(s)	149, 189, 526, 682, 860, 968, 1159, 1265, 1391
HspAI	GCGC	1 cut(s)	817
KpnI	GGTACC	1 cut(s)	1413
Ksp22I	TGATCA	1 cut(s)	1071
Kzo9I	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
LguI	GCTCTTC	2 cut(s)	217, 711
LmnI	GCTCC	6 cut(s)	14, 497, 1235, 1432, 1553, 2025
Lsp1109I	GCAGC	6 cut(s)	574, 942, 1225, 1316, 1566, 2018
LweI	GCATC	7 cut(s)	163, 657, 752, 862, 1128, 1591, 1775
MaeIII	GTNAC	4 cut(s)	202, 446, 1271, 1390
MalI	GATC	9 cut(s)	141, 183, 623, 1073, 1374, 1620, 1638, 1818, 1830
MbiI	CCGCTC	1 cut(s)	704
MboI	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
MflI	RGATCY	3 cut(s)	139, 1618, 1828
MhlI	GDGCHC	4 cut(s)	324, 1033, 1214, 1422
MluCI	AATT	8 cut(s)	160, 253, 429, 864, 1049, 1281, 1526, 2171
MlyI	GAGTC	2 cut(s)	388, 1835
MmeI	TCCRAC	4 cut(s)	589, 1151, 1182, 1324
MroXI	GAANNNNTTC	2 cut(s)	1137, 1659
MseI	TTAA	4 cut(s)	390, 843, 1017, 1572
MslI	CAYNNNNRTG	4 cut(s)	46, 1293, 1400, 1675
MspA1I	CMGCKG	1 cut(s)	619
MspCI	CTTAAG	1 cut(s)	389
MspI	CCGG	2 cut(s)	633, 1102
MspR9I	CCNGG	3 cut(s)	542, 634, 1695
Mva1269I	GAATGC	3 cut(s)	830, 1734, 2115
MvaI	CCWGG	2 cut(s)	542, 1695
MwoI	GCNNNNNNNGC	5 cut(s)	385, 762, 1235, 1603, 2031
NciI	CCSGG	1 cut(s)	634
NdeII	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
NlaIII	CATG	9 cut(s)	149, 189, 526, 682, 860, 968, 1159, 1265, 1391
NlaIV	GGNNCC	3 cut(s)	141, 1411, 1555
NmuCI	GTSAC	4 cut(s)	202, 446, 1271, 1390
NspI	RCATGY	3 cut(s)	968, 1159, 1391
OliI	CACNNNNGTG	2 cut(s)	1400, 1675
PagI	TCATGA	2 cut(s)	856, 1261
PciI	ACATGT	3 cut(s)	964, 1155, 1387
PciSI	GCTCTTC	2 cut(s)	217, 711
PctI	GAATGC	3 cut(s)	830, 1734, 2115
PdmI	GAANNNNTTC	2 cut(s)	1137, 1659
PfeI	GAWTC	6 cut(s)	1045, 1382, 1479, 1660, 1781, 2200
PfoI	TCCNGGA	1 cut(s)	540
PkrI	GCNGC	8 cut(s)	589, 703, 932, 1240, 1306, 1581, 2033, 2109
Ple19I	CGATCG	1 cut(s)	1819
PleI	GAGTC	2 cut(s)	388, 1835
PpsI	GAGTC	2 cut(s)	388, 1835
PscI	ACATGT	3 cut(s)	964, 1155, 1387
PshAI	GACNNNNGTC	1 cut(s)	200
Psp6I	CCWGG	2 cut(s)	540, 1693
PspEI	GGTNACC	1 cut(s)	446
PspGI	CCWGG	2 cut(s)	540, 1693
PspN4I	GGNNCC	3 cut(s)	141, 1411, 1555
PspPI	GGNCC	3 cut(s)	353, 544, 569
PsuI	RGATCY	3 cut(s)	139, 1618, 1828
PvuI	CGATCG	1 cut(s)	1819
RsaI	GTAC	7 cut(s)	467, 1314, 1411, 1681, 1688, 1857, 2189
RsaNI	GTAC	7 cut(s)	466, 1313, 1410, 1680, 1687, 1856, 2188
RseI	CAYNNNNRTG	4 cut(s)	46, 1293, 1400, 1675
SapI	GCTCTTC	2 cut(s)	217, 711
SaqAI	TTAA	4 cut(s)	390, 843, 1017, 1572
SatI	GCNGC	8 cut(s)	588, 702, 931, 1239, 1305, 1580, 2032, 2108
Sau3AI	GATC	9 cut(s)	139, 181, 621, 1071, 1372, 1618, 1636, 1816, 1828
Sau96I	GGNCC	3 cut(s)	353, 544, 569
ScaI	AGTACT	1 cut(s)	467
SchI	GAGTC	2 cut(s)	388, 1835
ScrFI	CCNGG	3 cut(s)	542, 634, 1695
SduI	GDGCHC	4 cut(s)	324, 1033, 1214, 1422
SfaNI	GCATC	7 cut(s)	163, 657, 752, 862, 1128, 1591, 1775
SinI	GGWCC	2 cut(s)	353, 544
SmiMI	CAYNNNNRTG	4 cut(s)	46, 1293, 1400, 1675
SmlI	CTYRAG	2 cut(s)	389, 469
SmoI	CTYRAG	2 cut(s)	389, 469
Sse9I	AATT	8 cut(s)	160, 253, 429, 864, 1049, 1281, 1526, 2171
SsiI	CCGC	9 cut(s)	617, 702, 1398, 1938, 2023, 2061, 2108, 2135, 2223
StyD4I	CCNGG	3 cut(s)	540, 632, 1693
StyI	CCWWGG	1 cut(s)	235
TaaI	ACNGT	5 cut(s)	326, 488, 997, 1331, 1920
TaqI	TCGA	1 cut(s)	1819
TasI	AATT	8 cut(s)	160, 253, 429, 864, 1049, 1281, 1526, 2171
TatI	WGTACW	5 cut(s)	465, 1312, 1679, 1855, 2187
TauI	GCSGC	2 cut(s)	704, 2110
TfiI	GAWTC	6 cut(s)	1045, 1382, 1479, 1660, 1781, 2200
Tru1I	TTAA	4 cut(s)	390, 843, 1017, 1572
Tru9I	TTAA	4 cut(s)	390, 843, 1017, 1572
TscAI	CASTG	7 cut(s)	427, 499, 1033, 1174, 1203, 1274, 1407
TseFI	GTSAC	4 cut(s)	202, 446, 1271, 1390
TseI	GCWGC	6 cut(s)	587, 930, 1238, 1304, 1579, 2031
Tsp45I	GTSAC	4 cut(s)	202, 446, 1271, 1390
TspDTI	ATGAA	8 cut(s)	695, 873, 881, 1076, 1250, 1797, 1836, 2108
TspGWI	ACGGA	1 cut(s)	1237
TspRI	CASTG	7 cut(s)	427, 499, 1033, 1174, 1203, 1274, 1407
Vha464I	CTTAAG	1 cut(s)	389
VneI	GTGCAC	1 cut(s)	320
VpaK11BI	GGWCC	2 cut(s)	353, 544
XapI	RAATTY	4 cut(s)	253, 429, 864, 1526
XbaI	TCTAGA	1 cut(s)	1522
XceI	RCATGY	3 cut(s)	968, 1159, 1391
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1168, 1203
XmaJI	CCTAGG	1 cut(s)	235
XmnI	GAANNNNTTC	2 cut(s)	1137, 1659
ZrmI	AGTACT	1 cut(s)	467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.