Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009880

Physical Location & Seq

Genomic Coordinates Forward (+)

79278496 .. 79281901

Gene Structure 3406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53218

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGGAATGGAAGGAGCAAAAGCTGTTCTATGTTTTGTGGCATTTGTGTGGTATTGGACTTGTGGGAATGGATTGCTTTCCCCTAAAGGTGTAAACTTTGAAGTTCAAGCTTTGATGGGCATAAAGGAAGCTCTGGAGGATCCTCATGGTGTTCTAGGTAATTGGGATTATGATGCTGTTGATCCATGTAGCTGGACTATGGTCACTTGCTCTTCTGAAAACCTCGTTGTTGGCCTAGGAGTTCCTAGCCAGAATTTATCAGGCACTCTTTCTCCAAGCATAGGCAACTTGACAAATCTTCAGATTGTTCTCGTACAGAACAACAACATAACAGGACCAATCCCTCAGGAAATTGGGAAGCTCTCAAAGCTCAAGACTCTTGATGTTTCCAGCAACTTCTTGACTGGGGGAATTCCCTCCTCTTTGGGTCACCTGAAAAGCCTCCAGTACTTGAGGCTCAACAATAACAGTCTCACCGGAGTACTTCCGATGTCGTTGGCTAACATGACCAACCTTGCCTTTCTGGACCTGTCCTACAATAATCTGAGTGGCCCTGTGCCTAGATTTGCTGCTAAAACATTCAACATAGTTGGAAACCCTCTGATCTGTGCAACCGGGTCTGAAGCAGACTGCAATGGGATGGAACTGATGCCAATGTCCATGAACTTGAATAATACACAGGCCGCTTTTCCTGACAAACCTAAAAGTCGCAAAATGGCACTTGCTTTTGGTTTGAGCCTCGGATGCCTCTGCCTGATTGTTCTTGGATTTGGAGTAGTTATATGGTGGAGGCAAAGGCGCTATAAACAGGCATTCTTTGATGTTAAAGACAAGCATCATGAAGAAATTTCGCTTGGGAACTTGAAGAGATTTCATTTCAGAGAACTTCAGATTGCAACAAATAACTTCAGCAGCAAGTACCTACTAGGAAAGGGAGGCTTTGGACATGTTTACAAAGGAACTCTCTGCGATGGCACTGTCGTAGCAGTCAAGAGACTTAAAGATGGCAGTGCTCTTGGTGGAGAGATTCAATTCCAGACTGAAGTTGAAATGATCAGCCTAGCAGTTCATCGCAACCTTCTCCGGCTTTATGGGTTTTGCATCACTCCAACAGAAAGACTTCTAGTTTACCCATACATGTCCAATGGCAGTGTGGCTTCTCGTCTCAAAGGGAAACCAGTGTTGGATTGGGGCACTAGGAAACGGATTGCCTTGGGAGCTGCAAGAGGATTGTTATACCTTCATGAGCAGTGTGACCCAAAAATTATCCACAGGGATGTGAAGGCAGCAAATGTACTTCTTGATGACTACTGTGAAGCTGTGGTCGGAGATTTCGATTTAGCAAAGCTTTTGGATCACCAAGATTCACATGTCACCACCGCAGTGAGGGGTACCATAGGGCACATAGCTCCGGAGTATCTTTCCACAGGCCAGTCTTCTGATAAAACAGATGTCTTTGGATTCGGTATTCTTCTCCTTGAACTAATCACAGGCCAGACAGCTCTAGAATTTGCCAAGTCAACTAGCCAAAAAGGAGCCATACTTGATTGGGTTAAGAAGCTGCATCAGGAAAAGAAGCTTGAAATGCTAGTGGACAAGGATCTTGATACTAACTATGATCGCATTGAGCTTGAAGAAATTATTCAAGTTGCACTCTTGTGTACTCAGTACCTTCCTGGTCATAGACCCAGAATGTCTGAAGTGGTCAGAATGCTAGAAGGTGATGGACTTGTGGAAAGATGGGAAGCATCTCAAAGAGCTGAATCAACAAAGTCCAAAGCTTACTTTTCATCATCCGATCGATACTCGGATCTTACTGATGACTCTTCATTATTAGTACAAGCAATGGAACTCTCAGGTCCAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008104 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031974 GO:0031981 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0036211 GO:0038023 GO:0040008 GO:0040014 GO:0040015 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045926 GO:0046777 GO:0048519 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051607 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0070727 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

622

Amino Acids

68.51

Weight (kDa)

6.71

Isoelectric Point (pI)

29.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 71	3e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	93 - 177	3e-10	Leucine-rich repeat region
LRR_8	PF13855	98 - 158	1.9e-07	Leucine rich repeat
LRR_8	PF13855	123 - 182	1.2e-09	Leucine rich repeat
LRR_4	PF12799	146 - 183	4.3e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	305 - 569	1.6e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	308 - 572	3.1e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16000
fragaria_vesca	FvH4_6g45850 FvH4_6g45850 FvH4_6g45850
malus_domestica	MD09G1079400.v1.1 MD17G1069800.v1.1
prunus_persica	Prupe.3G244900_v2.0.a1
pyrus_communis	pycom09g00620 pycom17g06990
rosa_chinensis	RchiOBHm_Chr2g0164051
rosa_laevigata	RLG00000021435
rosa_multiflora	Rmu_ssc0000432.1_g000008
rosa_roxburghii	Rroxscaffold_2G00086800
rosa_rugosa	Rorug02G0506300 Rorug02G0506300 Rorug02G0506300 Rorug02G0506400
rosa_samantha	Rh2BG585200 Rh2CG556100 Rh2DG594800
rosa_wichuraiana	Rw2G047530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1391
AccB1I	GGYRCC	1 cut(s)	1391
AccIII	TCCGGA	1 cut(s)	1411
AciI	CCGC	2 cut(s)	684, 1380
AclWI	GGATC	6 cut(s)	134, 147, 176, 1362, 1608, 1818
AcsI	RAATTY	4 cut(s)	253, 411, 846, 1508
AcuI	CTGAAG	6 cut(s)	284, 642, 872, 892, 1062, 1719
AfaI	GTAC	9 cut(s)	315, 449, 483, 920, 1296, 1393, 1663, 1670, 1839
AfiI	CCNNNNNNNGG	2 cut(s)	281, 1386
AflIII	ACRYGT	3 cut(s)	946, 1137, 1369
AjnI	CCWGG	1 cut(s)	1675
AjuI	GAANNNNNNNTTGG	4 cut(s)	837, 869, 1166, 1198
AleI	CACNNNNGTG	2 cut(s)	1382, 1657
Alw21I	GWGCWC	1 cut(s)	1015
Alw26I	GTCTC	3 cut(s)	476, 988, 1169
AlwI	GGATC	6 cut(s)	134, 147, 176, 1362, 1608, 1818
Aor13HI	TCCGGA	1 cut(s)	1411
AoxI	GGCC	5 cut(s)	232, 550, 681, 1429, 1492
ApeKI	GCWGC	5 cut(s)	569, 912, 1220, 1286, 1561
ApoI	RAATTY	4 cut(s)	253, 411, 846, 1508
Asp700I	GAANNNNTTC	2 cut(s)	1119, 1641
Asp718I	GGTACC	1 cut(s)	1391
AspA2I	CCTAGG	1 cut(s)	235
AspLEI	GCGC	1 cut(s)	801
AspS9I	GGNCC	4 cut(s)	335, 526, 551, 1859
AsuC2I	CCSGG	1 cut(s)	616
AsuHPI	GGTGA	5 cut(s)	422, 466, 1349, 1366, 1733
AvaII	GGWCC	3 cut(s)	335, 526, 1859
AvrII	CCTAGG	1 cut(s)	235
AxyI	CCTNAGG	1 cut(s)	345
BaeGI	GKGCMC	2 cut(s)	1196, 1404
BamHI	GGATCC	1 cut(s)	139
BanI	GGYRCC	1 cut(s)	1391
BbsI	GAAGAC	1 cut(s)	1428
Bbv12I	GWGCWC	1 cut(s)	1015
BbvI	GCAGC	5 cut(s)	556, 924, 1207, 1298, 1548
BccI	CCATC	6 cut(s)	109, 634, 965, 998, 1718, 1734
BciT130I	CCWGG	1 cut(s)	1677
BclI	TGATCA	1 cut(s)	1053
BcnI	CCSGG	1 cut(s)	616
BcoDI	GTCTC	3 cut(s)	476, 988, 1169
BfoI	RGCGCY	1 cut(s)	802
BisI	GCNGC	6 cut(s)	570, 684, 913, 1221, 1287, 1562
BlnI	CCTAGG	1 cut(s)	235
BlsI	GCNGC	6 cut(s)	571, 685, 914, 1222, 1288, 1563
BmcAI	AGTACT	2 cut(s)	449, 483
Bme1390I	CCNGG	2 cut(s)	616, 1677
Bme18I	GGWCC	3 cut(s)	335, 526, 1859
BmgT120I	GGNCC	4 cut(s)	335, 526, 551, 1859
BmiI	GGNNCC	3 cut(s)	141, 1393, 1537
BmrFI	CCNGG	2 cut(s)	616, 1677
BmrI	ACTGGG	1 cut(s)	414
BmsI	GCATC	7 cut(s)	163, 639, 734, 844, 1110, 1573, 1757
BmuI	ACTGGG	1 cut(s)	414
BoxI	GACNNNNGTC	1 cut(s)	200
BpiI	GAAGAC	1 cut(s)	1428
BpmI	CTGGAG	2 cut(s)	155, 428
BpuEI	CTTGAG	2 cut(s)	356, 472
BpuMI	CCSGG	1 cut(s)	616
Bsa29I	ATCGAT	1 cut(s)	1801
BsaJI	CCNNGG	4 cut(s)	235, 739, 1212, 1862
BsaWI	WCCGGW	2 cut(s)	476, 1411
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	2 cut(s)	281, 1386
Bse1I	ACTGG	4 cut(s)	409, 445, 1178, 1432
Bse21I	CCTNAGG	1 cut(s)	345
Bse3DI	GCAATG	2 cut(s)	640, 1851
BseAI	TCCGGA	1 cut(s)	1411
BseBI	CCWGG	1 cut(s)	1677
BseCI	ATCGAT	1 cut(s)	1801
BseDI	CCNNGG	4 cut(s)	235, 739, 1212, 1862
BseGI	GGATG	4 cut(s)	645, 749, 1282, 1793
BseLI	CCNNNNNNNGG	2 cut(s)	281, 1386
BseMI	GCAATG	2 cut(s)	640, 1851
BseMII	CTCAG	4 cut(s)	359, 536, 1679, 1869
BseNI	ACTGG	4 cut(s)	409, 445, 1178, 1432
BseRI	GAGGAG	1 cut(s)	409
BseSI	GKGCMC	2 cut(s)	1196, 1404
BseXI	GCAGC	5 cut(s)	556, 924, 1207, 1298, 1548
Bsh1285I	CGRYCG	1 cut(s)	1801
BshFI	GGCC	5 cut(s)	234, 552, 683, 1431, 1494
BshNI	GGYRCC	1 cut(s)	1391
BshVI	ATCGAT	1 cut(s)	1801
BsiEI	CGRYCG	1 cut(s)	1801
BsiHKAI	GWGCWC	1 cut(s)	1015
BsiSI	CCGG	4 cut(s)	477, 615, 1084, 1412
BslI	CCNNNNNNNGG	2 cut(s)	281, 1386
BsmAI	GTCTC	3 cut(s)	476, 988, 1169
BsmBI	CGTCTC	1 cut(s)	1169
BsmI	GAATGC	2 cut(s)	812, 1716
BsnI	GGCC	5 cut(s)	234, 552, 683, 1431, 1494
Bsp1286I	GDGCHC	3 cut(s)	1015, 1196, 1404
Bsp13I	TCCGGA	1 cut(s)	1411
Bsp143I	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
BspACI	CCGC	2 cut(s)	684, 1380
BspANI	GGCC	5 cut(s)	234, 552, 683, 1431, 1494
BspCNI	CTCAG	4 cut(s)	358, 537, 1678, 1868
BspDI	ATCGAT	1 cut(s)	1801
BspEI	TCCGGA	1 cut(s)	1411
BspHI	TCATGA	2 cut(s)	838, 1243
BspLI	GGNNCC	3 cut(s)	141, 1393, 1537
BspPI	GGATC	6 cut(s)	134, 147, 176, 1362, 1608, 1818
BspQI	GCTCTTC	1 cut(s)	217
BspT107I	GGYRCC	1 cut(s)	1391
BsrDI	GCAATG	2 cut(s)	640, 1851
BsrI	ACTGG	4 cut(s)	409, 445, 1178, 1432
BssECI	CCNNGG	4 cut(s)	235, 739, 1212, 1862
BssMI	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
BssT1I	CCWWGG	3 cut(s)	235, 1212, 1862
Bst2UI	CCWGG	1 cut(s)	1677
Bst4CI	ACNGT	3 cut(s)	470, 979, 1313
Bst6I	CTCTTC	3 cut(s)	217, 860, 1831
BstDEI	CTNAG	4 cut(s)	345, 545, 1665, 1855
BstEII	GGTNACC	1 cut(s)	428
BstF5I	GGATG	4 cut(s)	645, 749, 1282, 1793
BstH2I	RGCGCY	1 cut(s)	802
BstHHI	GCGC	1 cut(s)	801
BstKTI	GATC	9 cut(s)	142, 184, 606, 1056, 1357, 1603, 1621, 1801, 1813
BstMAI	GTCTC	3 cut(s)	476, 988, 1169
BstMBI	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
BstMCI	CGRYCG	1 cut(s)	1801
BstMWI	GCNNNNNNNGC	4 cut(s)	367, 744, 1217, 1585
BstNI	CCWGG	1 cut(s)	1677
BstNSI	RCATGY	3 cut(s)	950, 1141, 1373
BstPAI	GACNNNNGTC	1 cut(s)	200
BstPI	GGTNACC	1 cut(s)	428
BstSCI	CCNGG	2 cut(s)	614, 1675
BstSLI	GKGCMC	2 cut(s)	1196, 1404
BstV1I	GCAGC	5 cut(s)	556, 924, 1207, 1298, 1548
BstV2I	GAAGAC	1 cut(s)	1428
BstX2I	RGATCY	3 cut(s)	139, 1600, 1810
BstXI	CCANNNNNNTGG	1 cut(s)	192
BstYI	RGATCY	3 cut(s)	139, 1600, 1810
Bsu15I	ATCGAT	1 cut(s)	1801
Bsu36I	CCTNAGG	1 cut(s)	345
BsuRI	GGCC	5 cut(s)	234, 552, 683, 1431, 1494
BsuTUI	ATCGAT	1 cut(s)	1801
BtgZI	GCGATG	2 cut(s)	984, 1055
BtsCI	GGATG	4 cut(s)	645, 749, 1282, 1793
BtsI	GCAGTG	4 cut(s)	1015, 1156, 1256, 1389
BtsIMutI	CAGTG	6 cut(s)	975, 1015, 1156, 1185, 1256, 1389
CciI	TCATGA	2 cut(s)	838, 1243
CfoI	GCGC	1 cut(s)	801
Cfr13I	GGNCC	4 cut(s)	335, 526, 551, 1859
ClaI	ATCGAT	1 cut(s)	1801
Csp6I	GTAC	9 cut(s)	314, 448, 482, 919, 1295, 1392, 1662, 1669, 1838
CviAII	CATG	9 cut(s)	146, 186, 505, 661, 839, 947, 1138, 1244, 1370
CviQI	GTAC	9 cut(s)	314, 448, 482, 919, 1295, 1392, 1662, 1669, 1838
DdeI	CTNAG	4 cut(s)	345, 545, 1665, 1855
DpnI	GATC	9 cut(s)	141, 183, 605, 1055, 1356, 1602, 1620, 1800, 1812
DpnII	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
Eam1104I	CTCTTC	3 cut(s)	217, 860, 1831
EarI	CTCTTC	3 cut(s)	217, 860, 1831
Eco130I	CCWWGG	3 cut(s)	235, 1212, 1862
Eco47I	GGWCC	3 cut(s)	335, 526, 1859
Eco57I	CTGAAG	6 cut(s)	284, 642, 872, 892, 1062, 1719
Eco81I	CCTNAGG	1 cut(s)	345
Eco91I	GGTNACC	1 cut(s)	428
EcoO65I	GGTNACC	1 cut(s)	428
EcoRI	GAATTC	1 cut(s)	411
EcoRII	CCWGG	1 cut(s)	1675
EcoT14I	CCWWGG	3 cut(s)	235, 1212, 1862
ErhI	CCWWGG	3 cut(s)	235, 1212, 1862
Esp3I	CGTCTC	1 cut(s)	1169
FaeI	CATG	9 cut(s)	149, 189, 508, 664, 842, 950, 1141, 1247, 1373
FalI	AAGNNNNNCTT	2 cut(s)	923, 955
FatI	CATG	9 cut(s)	145, 185, 504, 660, 838, 946, 1137, 1243, 1369
FbaI	TGATCA	1 cut(s)	1053
Fnu4HI	GCNGC	6 cut(s)	570, 684, 913, 1221, 1287, 1562
FokI	GGATG	4 cut(s)	652, 756, 1289, 1780
Fsp4HI	GCNGC	6 cut(s)	570, 684, 913, 1221, 1287, 1562
GlaI	GCGC	1 cut(s)	800
GluI	GCNGC	6 cut(s)	570, 684, 913, 1221, 1287, 1562
GsuI	CTGGAG	2 cut(s)	155, 428
HaeII	RGCGCY	1 cut(s)	802
HaeIII	GGCC	5 cut(s)	234, 552, 683, 1431, 1494
HapII	CCGG	4 cut(s)	477, 615, 1084, 1412
HhaI	GCGC	1 cut(s)	801
Hin1II	CATG	9 cut(s)	149, 189, 508, 664, 842, 950, 1141, 1247, 1373
Hin6I	GCGC	1 cut(s)	799
HinP1I	GCGC	1 cut(s)	799
HincII	GTYRAC	1 cut(s)	1521
HindII	GTYRAC	1 cut(s)	1521
HindIII	AAGCTT	4 cut(s)	108, 1346, 1577, 1779
HinfI	GANTC	6 cut(s)	376, 1027, 1364, 1461, 1763, 1823
HpaII	CCGG	4 cut(s)	477, 615, 1084, 1412
HphI	GGTGA	5 cut(s)	422, 466, 1349, 1366, 1733
Hpy166II	GTNNAC	6 cut(s)	94, 952, 1129, 1521, 1594, 1662
Hpy8I	GTNNAC	6 cut(s)	94, 952, 1129, 1521, 1594, 1662
HpyAV	CCTTC	6 cut(s)	5, 1088, 1250, 1276, 1682, 1712
HpyCH4III	ACNGT	3 cut(s)	470, 979, 1313
HpyCH4V	TGCA	7 cut(s)	611, 633, 896, 1101, 1223, 1564, 1652
HpyF10VI	GCNNNNNNNGC	4 cut(s)	367, 744, 1217, 1585
HpyF3I	CTNAG	4 cut(s)	345, 545, 1665, 1855
Hsp92II	CATG	9 cut(s)	149, 189, 508, 664, 842, 950, 1141, 1247, 1373
HspAI	GCGC	1 cut(s)	799
Kpn2I	TCCGGA	1 cut(s)	1411
KpnI	GGTACC	1 cut(s)	1395
Ksp22I	TGATCA	1 cut(s)	1053
Kzo9I	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
LguI	GCTCTTC	1 cut(s)	217
LmnI	GCTCC	4 cut(s)	14, 1217, 1414, 1535
Lsp1109I	GCAGC	5 cut(s)	556, 924, 1207, 1298, 1548
LweI	GCATC	7 cut(s)	163, 639, 734, 844, 1110, 1573, 1757
MaeIII	GTNAC	4 cut(s)	202, 428, 1253, 1372
MalI	GATC	9 cut(s)	141, 183, 605, 1055, 1356, 1602, 1620, 1800, 1812
MboI	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
MboII	GAAGA	8 cut(s)	204, 290, 854, 877, 1428, 1463, 1646, 1818
MflI	RGATCY	3 cut(s)	139, 1600, 1810
MhlI	GDGCHC	3 cut(s)	1015, 1196, 1404
MluCI	AATT	9 cut(s)	160, 253, 351, 411, 846, 1031, 1263, 1508, 1638
MlyI	GAGTC	2 cut(s)	370, 1817
MmeI	TCCRAC	4 cut(s)	571, 1133, 1164, 1306
MroI	TCCGGA	1 cut(s)	1411
MroXI	GAANNNNTTC	2 cut(s)	1119, 1641
MseI	TTAA	3 cut(s)	825, 999, 1554
MslI	CAYNNNNRTG	4 cut(s)	46, 1275, 1382, 1657
MspI	CCGG	4 cut(s)	477, 615, 1084, 1412
MspR9I	CCNGG	2 cut(s)	616, 1677
Mva1269I	GAATGC	2 cut(s)	812, 1716
MvaI	CCWGG	1 cut(s)	1677
MwoI	GCNNNNNNNGC	4 cut(s)	367, 744, 1217, 1585
NciI	CCSGG	1 cut(s)	616
NdeII	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
NlaIII	CATG	9 cut(s)	149, 189, 508, 664, 842, 950, 1141, 1247, 1373
NlaIV	GGNNCC	3 cut(s)	141, 1393, 1537
NmuCI	GTSAC	4 cut(s)	202, 428, 1253, 1372
NspI	RCATGY	3 cut(s)	950, 1141, 1373
OliI	CACNNNNGTG	2 cut(s)	1382, 1657
PagI	TCATGA	2 cut(s)	838, 1243
PciI	ACATGT	3 cut(s)	946, 1137, 1369
PciSI	GCTCTTC	1 cut(s)	217
PcsI	WCGNNNNNNNCGW	1 cut(s)	1332
PctI	GAATGC	2 cut(s)	812, 1716
PdmI	GAANNNNTTC	2 cut(s)	1119, 1641
PfeI	GAWTC	4 cut(s)	1027, 1364, 1461, 1763
PkrI	GCNGC	6 cut(s)	571, 685, 914, 1222, 1288, 1563
Ple19I	CGATCG	1 cut(s)	1801
PleI	GAGTC	2 cut(s)	370, 1817
PpsI	GAGTC	2 cut(s)	370, 1817
PscI	ACATGT	3 cut(s)	946, 1137, 1369
PshAI	GACNNNNGTC	1 cut(s)	200
Psp6I	CCWGG	1 cut(s)	1675
PspEI	GGTNACC	1 cut(s)	428
PspGI	CCWGG	1 cut(s)	1675
PspN4I	GGNNCC	3 cut(s)	141, 1393, 1537
PspPI	GGNCC	4 cut(s)	335, 526, 551, 1859
PsuI	RGATCY	3 cut(s)	139, 1600, 1810
PvuI	CGATCG	1 cut(s)	1801
RsaI	GTAC	9 cut(s)	315, 449, 483, 920, 1296, 1393, 1663, 1670, 1839
RsaNI	GTAC	9 cut(s)	314, 448, 482, 919, 1295, 1392, 1662, 1669, 1838
RseI	CAYNNNNRTG	4 cut(s)	46, 1275, 1382, 1657
SapI	GCTCTTC	1 cut(s)	217
SaqAI	TTAA	3 cut(s)	825, 999, 1554
SatI	GCNGC	6 cut(s)	570, 684, 913, 1221, 1287, 1562
Sau3AI	GATC	9 cut(s)	139, 181, 603, 1053, 1354, 1600, 1618, 1798, 1810
Sau96I	GGNCC	4 cut(s)	335, 526, 551, 1859
ScaI	AGTACT	2 cut(s)	449, 483
SchI	GAGTC	2 cut(s)	370, 1817
ScrFI	CCNGG	2 cut(s)	616, 1677
SduI	GDGCHC	3 cut(s)	1015, 1196, 1404
SfaNI	GCATC	7 cut(s)	163, 639, 734, 844, 1110, 1573, 1757
SinI	GGWCC	3 cut(s)	335, 526, 1859
SmiMI	CAYNNNNRTG	4 cut(s)	46, 1275, 1382, 1657
SmlI	CTYRAG	2 cut(s)	371, 451
SmoI	CTYRAG	2 cut(s)	371, 451
Sse9I	AATT	9 cut(s)	160, 253, 351, 411, 846, 1031, 1263, 1508, 1638
SsiI	CCGC	2 cut(s)	684, 1380
StyD4I	CCNGG	2 cut(s)	614, 1675
StyI	CCWWGG	3 cut(s)	235, 1212, 1862
TaaI	ACNGT	3 cut(s)	470, 979, 1313
TaqI	TCGA	2 cut(s)	1335, 1801
TasI	AATT	9 cut(s)	160, 253, 351, 411, 846, 1031, 1263, 1508, 1638
TatI	WGTACW	5 cut(s)	447, 481, 1294, 1661, 1837
TauI	GCSGC	1 cut(s)	686
TfiI	GAWTC	4 cut(s)	1027, 1364, 1461, 1763
Tru1I	TTAA	3 cut(s)	825, 999, 1554
Tru9I	TTAA	3 cut(s)	825, 999, 1554
TscAI	CASTG	6 cut(s)	982, 1015, 1156, 1185, 1256, 1389
TseFI	GTSAC	4 cut(s)	202, 428, 1253, 1372
TseI	GCWGC	5 cut(s)	569, 912, 1220, 1286, 1561
Tsp45I	GTSAC	4 cut(s)	202, 428, 1253, 1372
TspDTI	ATGAA	7 cut(s)	677, 855, 863, 1058, 1232, 1779, 1818
TspGWI	ACGGA	1 cut(s)	1219
TspRI	CASTG	6 cut(s)	982, 1015, 1156, 1185, 1256, 1389
VpaK11BI	GGWCC	3 cut(s)	335, 526, 1859
XapI	RAATTY	4 cut(s)	253, 411, 846, 1508
XbaI	TCTAGA	1 cut(s)	1504
XceI	RCATGY	3 cut(s)	950, 1141, 1373
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1150, 1185
XmaJI	CCTAGG	1 cut(s)	235
XmnI	GAANNNNTTC	2 cut(s)	1119, 1641
ZrmI	AGTACT	2 cut(s)	449, 483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.