pycom09g19040

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0019763
Physical Location & Seq
Forward (+)
19836889 .. 19839269
2381 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g19040.3

Sequence Viewer

Length: 1539 bp
ATGGAAGCCTTCCCTCTCTGCATGATCATTGCATTGTTATCAGTTGCTGCATATTTTTTCATCACTCGTCTTGTCCACGGCGGCAAATATGAGAATTGGAAGAACTCCCCGCCAGGACCTGTTGGATGGCCGATACTCGGAAACCTTCTTCAACTGAGCAGCAGCCAAATGCATGAACACTTGTTTAAGTTATCCAAAATTCATGGCCCGCTCTTTAGCCTGAAATTGGGTCCAAAGCCGGTCATTGTGGCAGCTTCGCCGGAAATGGCAAGCATTATCCTCAAGGAACAGGAGGCTGTTTTCTCCAATCATGTCGCCAACGAGACCTCCCTAGTCATGTCATATGATGCCACCTCCCTTGTATATTCTCCGATGGGTACACGATGGAGAGTGCTCAGAAGAATATTGAATGAAAATGTCTTCTCTACTAGAGCCCTTGACAATTTTACACCACTTCGCAAGCAAAAGGTCCATGGATTACTGAAGCAGCTCTACTCAGCTTCTTCGTCAAAGAATCCGGTGAACATTGGAGAGTGGGTTTTCATCACCGTAGCCAACATTACAAGCAACCTTACATGCAGTAAGAGCCTTTTTGAGTACACAACAATGGAAGGGAGAGAAATGAAAGAATCATTAAGAGAATTAATAAAACTTCTTGGCACGGGCAATGTTGCTGATTTCTTCCCATTATTCAAGCCTTTTGATCCTCAAGGGCTCAAACGGAGAACGTTGGCGATCTTTTGGAAATATGATGCTTTGTATGAGAAACTTATCGACGAGAGGTTGAAAGAGAGGGAAATTGGAATCAACAATACTACTAAGAAGGAGAAAGGGGACATGTTAGATGCATTGTTGAACTATAGAAGTGATAAAGATGATGACCTGAGAACGCTTTCTAGAAACATGATCAAAAGCTTGCTTTCGGACATGTTCATTGCAAGCACGGAGACAAGCACAAGCACTGTCGAGTGGGGAATGGCAGAGATCCTGAAAAACCCTGATGTACACAAGAAAATAGTTCTGGAATTGGACCAAGTTGTTGGAAAGGACAGGTTTGTTGAAGAAAGCGACATTGCGAATTTGCCTTACCTTCAAGCAGTAGTGAAAGAAGTTTTCCGACTCCACCCAGCAGTCCCACTCATTACTCGTCGCTCATACAAGGCTTGTGAGGTTTCTGGGTATCATTTTCCTAAGGATTGCGTTGCGGTGGTGAACATTTGGGGGATGGCTAGAGATCCAAGCATTTGGGAAGAGCCTTGCAAATTCAAACCAGAAAGGTTTATTGGTTTGAAGATTGATGTGAAAGGCCAAGACTTCAATCTACTGCCATTTGGGTGTGGGAAAAGGATCTGTGTAGGATGGCCGCTTGCTCATCGCACGGTGCAATTTTACTTGGCAGCATATCTCCATGCGTTTGAGTGGGAATGCCCTCCTGAAGTCGTGGACAATATGGAAGAATTTGTTGGGATTACAATTCAAAAGGCCAAGAGTATCATCGCCATTCCCAAACCTAGACTGTCAACTTCTGTTTACCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

513

Amino Acids

58.2

Weight (kDa)

8.77

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019763)

Species Orthologous Gene IDs
malus_domestica MD03G1101200.v1.1 MD03G1101800.v1.1 MD09G1282400.v1.1 MD09G1282500.v1.1
prunus_persica Prupe.8G008200_v2.0.a1
pyrus_communis pycom09g19040 pycom17g27110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 211
AciI CCGC 5 cut(s) 81, 110, 209, 1205, 1364
AclI AACGTT 1 cut(s) 728
AclWI GGATC 4 cut(s) 698, 979, 1229, 1355
AcoI YGGCCR 2 cut(s) 128, 1361
AcsI RAATTY 4 cut(s) 198, 1078, 1262, 1457
AcuI CTGAAG 2 cut(s) 503, 1455
AfaI GTAC 3 cut(s) 379, 599, 1005
AfiI CCNNNNNNNGG 2 cut(s) 137, 226
AflIII ACRYGT 2 cut(s) 837, 927
AjnI CCWGG 1 cut(s) 112
AjuI GAANNNNNNNTTGG 4 cut(s) 1266, 1298, 1446, 1478
AluBI AGCT 4 cut(s) 254, 490, 500, 915
AluI AGCT 4 cut(s) 254, 490, 500, 915
Alw21I GWGCWC 1 cut(s) 396
Alw26I GTCTC 2 cut(s) 317, 941
AlwI GGATC 4 cut(s) 698, 979, 1229, 1355
AlwNI CAGNNNCTG 2 cut(s) 47, 119
AoxI GGCC 5 cut(s) 128, 205, 1306, 1361, 1482
ApeKI GCWGC 6 cut(s) 47, 159, 162, 251, 487, 1397
ApoI RAATTY 4 cut(s) 198, 1078, 1262, 1457
AseI ATTAAT 1 cut(s) 644
Asp700I GAANNNNTTC 1 cut(s) 892
AspS9I GGNCC 5 cut(s) 116, 206, 230, 469, 1030
AsuHPI GGTGA 3 cut(s) 532, 538, 1222
AvaII GGWCC 4 cut(s) 116, 230, 469, 1030
AxyI CCTNAGG 1 cut(s) 1191
BanII GRGCYC 2 cut(s) 436, 717
BarI GAAGNNNNNNTAC 2 cut(s) 476, 508
BbsI GAAGAC 1 cut(s) 412
Bbv12I GWGCWC 1 cut(s) 396
BbvI GCAGC 6 cut(s) 34, 171, 174, 263, 499, 1409
BccI CCATC 5 cut(s) 120, 367, 378, 1219, 1353
BceAI ACGGC 1 cut(s) 94
BciT130I CCWGG 1 cut(s) 114
BclI TGATCA 2 cut(s) 24, 906
BcoDI GTCTC 2 cut(s) 317, 941
BfaI CTAG 5 cut(s) 332, 429, 897, 1230, 1512
BfmI CTRYAG 1 cut(s) 859
BisI GCNGC 8 cut(s) 48, 82, 160, 163, 252, 488, 1364, 1398
BlsI GCNGC 8 cut(s) 49, 83, 161, 164, 253, 489, 1365, 1399
Bme1390I CCNGG 1 cut(s) 114
Bme18I GGWCC 4 cut(s) 116, 230, 469, 1030
BmgT120I GGNCC 5 cut(s) 116, 206, 230, 469, 1030
BmiI GGNNCC 1 cut(s) 231
BmrFI CCNGG 1 cut(s) 114
BmsI GCATC 3 cut(s) 337, 742, 835
BpiI GAAGAC 1 cut(s) 412
BpuEI CTTGAG 2 cut(s) 266, 693
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 2 cut(s) 76, 472
BsaWI WCCGGW 1 cut(s) 517
BsaXI ACNNNNNCTCC 4 cut(s) 311, 341, 522, 552
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 226
Bse118I RCCGGY 1 cut(s) 238
Bse21I CCTNAGG 1 cut(s) 1191
Bse3DI GCAATG 4 cut(s) 27, 673, 933, 1071
BseBI CCWGG 1 cut(s) 114
BseDI CCNNGG 2 cut(s) 76, 472
BseGI GGATG 3 cut(s) 131, 1230, 1364
BseLI CCNNNNNNNGG 2 cut(s) 137, 226
BseMI GCAATG 4 cut(s) 27, 673, 933, 1071
BseMII CTCAG 4 cut(s) 146, 409, 510, 875
BseXI GCAGC 6 cut(s) 34, 171, 174, 263, 499, 1409
BseYI CCCAGC 1 cut(s) 1126
BshFI GGCC 5 cut(s) 130, 207, 1308, 1363, 1484
BsiHKAI GWGCWC 1 cut(s) 396
BsiSI CCGG 3 cut(s) 239, 260, 518
BslFI GGGAC 2 cut(s) 848, 1118
BslI CCNNNNNNNGG 2 cut(s) 137, 226
BsmAI GTCTC 2 cut(s) 317, 941
BsmFI GGGAC 2 cut(s) 848, 1118
BsmI GAATGC 1 cut(s) 1430
BsnI GGCC 5 cut(s) 130, 207, 1308, 1363, 1484
Bso31I GGTCTC 1 cut(s) 317
Bsp1286I GDGCHC 3 cut(s) 396, 436, 717
Bsp1407I TGTACA 1 cut(s) 1003
Bsp143I GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
Bsp19I CCATGG 1 cut(s) 472
BspACI CCGC 5 cut(s) 81, 110, 209, 1205, 1364
BspANI GGCC 5 cut(s) 130, 207, 1308, 1363, 1484
BspCNI CTCAG 4 cut(s) 147, 408, 509, 876
BspLI GGNNCC 1 cut(s) 231
BspPI GGATC 4 cut(s) 698, 979, 1229, 1355
BspQI GCTCTTC 1 cut(s) 1245
BspTNI GGTCTC 1 cut(s) 317
BsrBI CCGCTC 1 cut(s) 211
BsrDI GCAATG 4 cut(s) 27, 673, 933, 1071
BsrFI RCCGGY 1 cut(s) 238
BsrGI TGTACA 1 cut(s) 1003
BssAI RCCGGY 1 cut(s) 238
BssECI CCNNGG 2 cut(s) 76, 472
BssMI GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
BssT1I CCWWGG 1 cut(s) 472
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 4 cut(s) 550, 964, 1381, 1518
Bst6I CTCTTC 1 cut(s) 1245
BstAUI TGTACA 1 cut(s) 1003
BstC8I GCNNGC 6 cut(s) 209, 271, 461, 917, 940, 1368
BstDEI CTNAG 6 cut(s) 155, 395, 496, 819, 884, 1191
BstDSI CCRYGG 2 cut(s) 76, 472
BstF5I GGATG 3 cut(s) 131, 1230, 1364
BstKTI GATC 7 cut(s) 27, 706, 738, 909, 987, 1237, 1350
BstMAI GTCTC 2 cut(s) 317, 941
BstMBI GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
BstMWI GCNNNNNNNGC 1 cut(s) 585
BstNI CCWGG 1 cut(s) 114
BstNSI RCATGY 3 cut(s) 579, 841, 931
BstSCI CCNGG 1 cut(s) 112
BstSFI CTRYAG 1 cut(s) 859
BstV1I GCAGC 6 cut(s) 34, 171, 174, 263, 499, 1409
BstV2I GAAGAC 1 cut(s) 412
BstX2I RGATCY 3 cut(s) 984, 1234, 1347
BstXI CCANNNNNNTGG 2 cut(s) 1040, 1245
BstYI RGATCY 3 cut(s) 984, 1234, 1347
Bsu36I CCTNAGG 1 cut(s) 1191
BsuRI GGCC 5 cut(s) 130, 207, 1308, 1363, 1484
BtgI CCRYGG 2 cut(s) 76, 472
BtgZI GCGATG 2 cut(s) 1358, 1480
BtsCI GGATG 3 cut(s) 131, 1230, 1364
BtsIMutI CAGTG 1 cut(s) 960
Cac8I GCNNGC 6 cut(s) 209, 271, 461, 917, 940, 1368
CaiI CAGNNNCTG 2 cut(s) 47, 119
Cfr10I RCCGGY 1 cut(s) 238
Cfr13I GGNCC 5 cut(s) 116, 206, 230, 469, 1030
Csp6I GTAC 3 cut(s) 378, 598, 1004
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviQI GTAC 3 cut(s) 378, 598, 1004
DdeI CTNAG 6 cut(s) 155, 395, 496, 819, 884, 1191
DpnI GATC 7 cut(s) 26, 705, 737, 908, 986, 1236, 1349
DpnII GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
EaeI YGGCCR 2 cut(s) 128, 1361
Eam1104I CTCTTC 1 cut(s) 1245
EarI CTCTTC 1 cut(s) 1245
Eco130I CCWWGG 1 cut(s) 472
Eco24I GRGCYC 2 cut(s) 436, 717
Eco31I GGTCTC 1 cut(s) 317
Eco47I GGWCC 4 cut(s) 116, 230, 469, 1030
Eco57I CTGAAG 2 cut(s) 503, 1455
Eco81I CCTNAGG 1 cut(s) 1191
EcoO109I RGGNCCY 1 cut(s) 116
EcoRII CCWGG 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 472
EcoT22I ATGCAT 2 cut(s) 174, 850
EcoT38I GRGCYC 2 cut(s) 436, 717
ErhI CCWWGG 1 cut(s) 472
FaqI GGGAC 2 cut(s) 848, 1118
FauI CCCGC 2 cut(s) 117, 216
FauNDI CATATG 1 cut(s) 343
FbaI TGATCA 2 cut(s) 24, 906
Fnu4HI GCNGC 8 cut(s) 48, 82, 160, 163, 252, 488, 1364, 1398
FokI GGATG 3 cut(s) 138, 1237, 1371
FriOI GRGCYC 2 cut(s) 436, 717
Fsp4HI GCNGC 8 cut(s) 48, 82, 160, 163, 252, 488, 1364, 1398
FspBI CTAG 5 cut(s) 332, 429, 897, 1230, 1512
GluI GCNGC 8 cut(s) 48, 82, 160, 163, 252, 488, 1364, 1398
GsaI CCCAGC 1 cut(s) 1130
HaeIII GGCC 5 cut(s) 130, 207, 1308, 1363, 1484
HapII CCGG 3 cut(s) 239, 260, 518
HincII GTYRAC 1 cut(s) 1521
HindII GTYRAC 1 cut(s) 1521
HindIII AAGCTT 1 cut(s) 913
HinfI GANTC 4 cut(s) 514, 629, 804, 1119
HpaII CCGG 3 cut(s) 239, 260, 518
HphI GGTGA 3 cut(s) 532, 538, 1222
Hpy166II GTNNAC 9 cut(s) 76, 380, 523, 600, 1006, 1213, 1444, 1521, 1531
Hpy188I TCNGA 5 cut(s) 140, 372, 398, 925, 1118
Hpy188III TCNNGA 4 cut(s) 897, 988, 1022, 1433
Hpy8I GTNNAC 9 cut(s) 76, 380, 523, 600, 1006, 1213, 1444, 1521, 1531
Hpy99I CGWCG 2 cut(s) 779, 1152
HpyAV CCTTC 5 cut(s) 19, 155, 605, 817, 1100
HpyCH4III ACNGT 4 cut(s) 550, 964, 1381, 1518
HpyCH4IV ACGT 1 cut(s) 728
HpyCH4V TGCA 9 cut(s) 21, 32, 50, 172, 579, 848, 938, 1260, 1384
HpyF10VI GCNNNNNNNGC 1 cut(s) 585
HpyF3I CTNAG 6 cut(s) 155, 395, 496, 819, 884, 1191
HpySE526I ACGT 1 cut(s) 728
Ksp22I TGATCA 2 cut(s) 24, 906
Kzo9I GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
LguI GCTCTTC 1 cut(s) 1245
Lsp1109I GCAGC 6 cut(s) 34, 171, 174, 263, 499, 1409
LweI GCATC 3 cut(s) 337, 742, 835
MaeI CTAG 5 cut(s) 332, 429, 897, 1230, 1512
MaeII ACGT 1 cut(s) 728
MalI GATC 7 cut(s) 26, 705, 737, 908, 986, 1236, 1349
MbiI CCGCTC 1 cut(s) 211
MboI GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
MflI RGATCY 3 cut(s) 984, 1234, 1347
MhlI GDGCHC 3 cut(s) 396, 436, 717
MlyI GAGTC 1 cut(s) 1113
MmeI TCCRAC 3 cut(s) 103, 1021, 1141
Mph1103I ATGCAT 2 cut(s) 174, 850
MroXI GAANNNNTTC 1 cut(s) 892
MseI TTAA 3 cut(s) 186, 635, 644
MslI CAYNNNNRTG 2 cut(s) 605, 1333
MspI CCGG 3 cut(s) 239, 260, 518
MspR9I CCNGG 1 cut(s) 114
Mva1269I GAATGC 1 cut(s) 1430
MvaI CCWGG 1 cut(s) 114
MwoI GCNNNNNNNGC 1 cut(s) 585
NcoI CCATGG 1 cut(s) 472
NdeI CATATG 1 cut(s) 343
NdeII GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
NlaIV GGNNCC 1 cut(s) 231
NsiI ATGCAT 2 cut(s) 174, 850
NspI RCATGY 3 cut(s) 579, 841, 931
PciI ACATGT 2 cut(s) 837, 927
PciSI GCTCTTC 1 cut(s) 1245
PctI GAATGC 1 cut(s) 1430
PdmI GAANNNNTTC 1 cut(s) 892
PfeI GAWTC 3 cut(s) 514, 629, 804
PkrI GCNGC 8 cut(s) 49, 83, 161, 164, 253, 489, 1365, 1399
PleI GAGTC 1 cut(s) 1113
PpsI GAGTC 1 cut(s) 1113
PpuMI RGGWCCY 1 cut(s) 116
PscI ACATGT 2 cut(s) 837, 927
PshBI ATTAAT 1 cut(s) 644
Psp1406I AACGTT 1 cut(s) 728
Psp5II RGGWCCY 1 cut(s) 116
Psp6I CCWGG 1 cut(s) 112
PspFI CCCAGC 1 cut(s) 1126
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 1 cut(s) 231
PspPI GGNCC 5 cut(s) 116, 206, 230, 469, 1030
PspPPI RGGWCCY 1 cut(s) 116
PstNI CAGNNNCTG 2 cut(s) 47, 119
PsuI RGATCY 3 cut(s) 984, 1234, 1347
RsaI GTAC 3 cut(s) 379, 599, 1005
RsaNI GTAC 3 cut(s) 378, 598, 1004
RseI CAYNNNNRTG 2 cut(s) 605, 1333
SapI GCTCTTC 1 cut(s) 1245
SaqAI TTAA 3 cut(s) 186, 635, 644
SatI GCNGC 8 cut(s) 48, 82, 160, 163, 252, 488, 1364, 1398
Sau3AI GATC 7 cut(s) 24, 703, 735, 906, 984, 1234, 1347
Sau96I GGNCC 5 cut(s) 116, 206, 230, 469, 1030
SchI GAGTC 1 cut(s) 1113
ScrFI CCNGG 1 cut(s) 114
SduI GDGCHC 3 cut(s) 396, 436, 717
SfaNI GCATC 3 cut(s) 337, 742, 835
SfcI CTRYAG 1 cut(s) 859
SinI GGWCC 4 cut(s) 116, 230, 469, 1030
SmiMI CAYNNNNRTG 2 cut(s) 605, 1333
SmlI CTYRAG 2 cut(s) 281, 708
SmoI CTYRAG 2 cut(s) 281, 708
SsiI CCGC 5 cut(s) 81, 110, 209, 1205, 1364
SspI AATATT 1 cut(s) 405
SspMI CTAG 5 cut(s) 332, 429, 897, 1230, 1512
StyD4I CCNGG 1 cut(s) 112
StyI CCWWGG 1 cut(s) 472
TaaI ACNGT 4 cut(s) 550, 964, 1381, 1518
TaiI ACGT 1 cut(s) 731
TaqI TCGA 2 cut(s) 774, 966
TatI WGTACW 2 cut(s) 597, 1003
TauI GCSGC 2 cut(s) 84, 1366
TfiI GAWTC 3 cut(s) 514, 629, 804
Tru1I TTAA 3 cut(s) 186, 635, 644
Tru9I TTAA 3 cut(s) 186, 635, 644
TscAI CASTG 1 cut(s) 967
TseI GCWGC 6 cut(s) 47, 159, 162, 251, 487, 1397
TspDTI ATGAA 7 cut(s) 49, 189, 191, 426, 532, 638, 922
TspGWI ACGGA 2 cut(s) 736, 959
TspRI CASTG 1 cut(s) 967
VpaK11BI GGWCC 4 cut(s) 116, 230, 469, 1030
VspI ATTAAT 1 cut(s) 644
XapI RAATTY 4 cut(s) 198, 1078, 1262, 1457
XbaI TCTAGA 1 cut(s) 896
XceI RCATGY 3 cut(s) 579, 841, 931
XmnI GAANNNNTTC 1 cut(s) 892
XspI CTAG 5 cut(s) 332, 429, 897, 1230, 1512
Zsp2I ATGCAT 2 cut(s) 174, 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.