pycom10g05640

Diaminopimelate decarboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0012138
Physical Location & Seq
Forward (+)
6048942 .. 6052853
3912 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g05640.1

Sequence Viewer

Length: 1767 bp
ATGAGGATTTTGTTTCATTTTCCATTGACATGGTCTCTTCTGTGTGCCCGCTTTTGGGTTTCCGTTGGCAAAGAAAGAGAGTATGCGAATAAATGCGACAATTACGGAGATGATTCTAAATTAATTATTTCTAATTTAACCAACTTTTCTACAAACGGCATCCCCCTATTTCGACATAATGAACATCTAACGGTCAGAAATAAAACACCGAAAGTGCAGCACTACGAACAAAACGCAATCAGTAAAACCAGGTCTCTCGTAGCAGTCACTTCCTTTGTTCTTCTTCCCCTTCAGGTTTCAATGGCGGCTGCTGCACAGCTCCCTTTCCAGACCTCATCATCCCTCTCCCTTAAACCCCTGAAGAACCCTATAACCCGAAACCCATTTTCCCAAAACTCCATTCTGCCCCTCCGACCCTCCACCTCCCTAAAACCCCTTGTCCTCCGAGCCGCCGTCGTCTCCCAAAACCCGTCCAAATCCCTGTCCCAAACGACCCCGTTCGAGCATTGCTTCTCCAAATTCTCCGATGGGTTTCTCTACTGCGAGGGCCTCAAGGTCCAGGACGTCTTAGATTCGGTCGAGCGGCGCCCTTTCTACCTCTACAGCAAGCCGCAGATCACCCGAAACGTCGAGGCCTACAAGGACGCGTTGGAGGGGTTGAGCTCTGTCATCGGATACGCCATTAAAGCCAACAACAATCTCAAGATTTTGGAACATTTGAGGCAATTGGGTTGCGGTGCTGTTCTTGTCAGTGGGAATGAGCTCCGGTTGGCTCTTCGAGCTGGGTTCGACCCCACCAAGTGCATTTTTAATGGGAATGGAAAATTGTTGGAGGACTTGGTTTTGGCTGCCCAAGAAGGTGTTTTTATCAATATTGATAGTGAATTCGACTTGGAAAACATTGTTGCCGCAGCGAGAATTGCTGGCAAGAAGGTCAATGTTCTACTTCGGATCAACCCGGATGTAGATCCTCAGGTTCATGCTTATGTTGCCACTGGAAACAAGAATTCGAAATTTGGTATTAGAAATGAGAAGCTGCAATGGTTTTTGGATGCTGTGAAGGCGCATCCTGATGAGCTAAAACTTGTTGGAGCCCATTGTCATCTCGGATCTACCATTACCAAGGTGGATATATTTCGGGATGCTGCTGTTCTTATGGTTAAGTACATTGAAGAAATCCGTTCTCAAGGTTTTCAAGTTGATTACTTGAACATTGGTGGTGGACTTGGGATAGATTACTATCATTCTGGTGCCGTACTTCCGAAACCCAGAGATCTCATCAACACTGTTCGTGATGTGGTCCTATCACAAGGTTTGAATCTTATCATTGAACCTGGTAGATCACTTATTGCAAATTCTTGCTGCTTGGTCAACCGAGTAACAGGTGTCAAAACAAATGGCACCAAAAACTTTATTGTGATCGATGGAAGCATGGCTGAACTTATCCGTCCCAGTCTCTACGATGCTTACCAACATATAGAACTAGTTGCTCCTACAGCACCTGATGCTGAGATTTCGACTTTTGATGTGGTGGGCCCTGTCTGCGAGTCTGCAGATTTCTTAGGGAAGGATAGAGAACTTCCGACTCCACCTAAGGGAGCTGGTCTGGTGGTTCACGACGCAGGCGCTTATTGCATGAGCATGGCCTCAACTTACAATCTTAAAATGCGCCCTCCAGAGTATTGGGTTCAAGAAGATGGATCCGTAGACAAGATCCGTCATGCAGAGACATTTGAAGACCACATGCGATTCTTTGAGGGTCTTTGA

Protein Analysis

589

Amino Acids

65.18

Weight (kDa)

7.92

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Orn_DAP_Arg_deC PF00278 202 - 542 2e-22 Pyridoxal-dependent decarboxylase, C-terminal sheet domain
Orn_Arg_deC_N PF02784 205 - 451 2.3e-48 Pyridoxal-dependent decarboxylase, pyridoxal binding domain
Ala_racemase_N PF01168 205 - 405 2.6e-06 Alanine racemase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14390 AT5G11880
fragaria_vesca FvH4_2g09380
malus_domestica MD05G1063100.v1.1 MD10G1070600.v1.1
prunus_persica Prupe.8G092300_v2.0.a1 Prupe.8G092300_v2.0.a1
pyrus_communis pycom05g05450 pycom10g05640
rosa_chinensis RchiOBHm_Chr6g0265651
rosa_laevigata RLG00000014169
rosa_multiflora Rmu_sc0003233.1_g000010
rosa_roxburghii Rroxscaffold_175G00432470 Rroxscaffold_7G00202530
rosa_rugosa Rorug06G0018200
rosa_samantha Rh6AG140300 Rh6BG140100 Rh6CG137200
rosa_wichuraiana Rw6G012110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 567
AccB1I GGYRCC 3 cut(s) 585, 1250, 1400
AccBSI CCGCTC 1 cut(s) 583
AccI GTMKAC 1 cut(s) 1707
AccII CGCG 1 cut(s) 647
AciI CCGC 7 cut(s) 49, 305, 450, 583, 611, 735, 909
AclWI GGATC 6 cut(s) 959, 962, 1117, 1695, 1708, 1708
AcsI RAATTY 5 cut(s) 518, 884, 1006, 1013, 1354
AcuI CTGAAG 2 cut(s) 275, 380
AcyI GRCGYC 2 cut(s) 564, 586
AdeI CACNNNGTG 1 cut(s) 801
AfaI GTAC 2 cut(s) 1166, 1257
AfiI CCNNNNNNNGG 3 cut(s) 54, 55, 1595
AflIII ACRYGT 1 cut(s) 645
AgsI TTSAA 8 cut(s) 300, 1172, 1196, 1210, 1318, 1331, 1691, 1736
AhlI ACTAGT 1 cut(s) 1483
AjnI CCWGG 3 cut(s) 248, 558, 1333
AjuI GAANNNNNNNTTGG 2 cut(s) 384, 416
AluBI AGCT 7 cut(s) 319, 663, 763, 782, 1036, 1078, 1601
AluI AGCT 7 cut(s) 319, 663, 763, 782, 1036, 1078, 1601
Alw21I GWGCWC 2 cut(s) 665, 765
Alw26I GTCTC 5 cut(s) 39, 258, 463, 1460, 1721
AlwI GGATC 6 cut(s) 959, 962, 1117, 1695, 1708, 1708
AlwNI CAGNNNCTG 1 cut(s) 1502
AoxI GGCC 4 cut(s) 547, 633, 1534, 1644
ApaI GGGCCC 1 cut(s) 1538
ApeKI GCWGC 8 cut(s) 217, 308, 311, 848, 911, 1036, 1145, 1362
ApoI RAATTY 5 cut(s) 518, 884, 1006, 1013, 1354
AseI ATTAAT 1 cut(s) 122
AspLEI GCGC 4 cut(s) 588, 1066, 1628, 1671
AspS9I GGNCC 5 cut(s) 547, 556, 1300, 1534, 1535
AsuC2I CCSGG 1 cut(s) 959
AsuHPI GGTGA 1 cut(s) 610
AsuII TTCGAA 1 cut(s) 1010
AvaII GGWCC 2 cut(s) 556, 1300
AxyI CCTNAGG 2 cut(s) 972, 1593
BaeGI GKGCMC 2 cut(s) 49, 1538
BamHI GGATCC 1 cut(s) 1700
BanI GGYRCC 3 cut(s) 585, 1250, 1400
BanII GRGCYC 4 cut(s) 665, 765, 1096, 1538
BbsI GAAGAC 1 cut(s) 1743
Bbv12I GWGCWC 2 cut(s) 665, 765
BbvI GCAGC 8 cut(s) 229, 295, 298, 835, 923, 1023, 1132, 1349
BccI CCATC 3 cut(s) 521, 1418, 1691
BceAI ACGGC 3 cut(s) 172, 437, 1238
BciT130I CCWGG 3 cut(s) 250, 560, 1335
BciVI GTATCC 1 cut(s) 668
BcnI CCSGG 1 cut(s) 959
BcoDI GTCTC 5 cut(s) 39, 258, 463, 1460, 1721
BcuI ACTAGT 1 cut(s) 1483
BfaI CTAG 1 cut(s) 1484
BfmI CTRYAG 3 cut(s) 601, 1494, 1551
BfoI RGCGCY 2 cut(s) 589, 1629
BfuI GTATCC 1 cut(s) 668
BglII AGATCT 1 cut(s) 1273
Bme1390I CCNGG 4 cut(s) 250, 560, 959, 1335
Bme18I GGWCC 2 cut(s) 556, 1300
BmgT120I GGNCC 5 cut(s) 547, 556, 1300, 1534, 1535
BmiI GGNNCC 6 cut(s) 587, 1093, 1252, 1402, 1536, 1702
BmrFI CCNGG 4 cut(s) 250, 560, 959, 1335
BmrI ACTGGG 1 cut(s) 1446
BmsI GCATC 6 cut(s) 168, 1042, 1075, 1132, 1453, 1495
BmuI ACTGGG 1 cut(s) 1446
BpiI GAAGAC 1 cut(s) 1743
BpmI CTGGAG 1 cut(s) 1659
Bpu14I TTCGAA 1 cut(s) 1010
BpuEI CTTGAG 3 cut(s) 536, 686, 1170
BpuMI CCSGG 1 cut(s) 959
Bsa29I ATCGAT 1 cut(s) 1422
BsaBI GATNNNNATC 2 cut(s) 966, 1239
BsaHI GRCGYC 2 cut(s) 564, 586
BsaI GGTCTC 2 cut(s) 39, 258
BsaJI CCNNGG 1 cut(s) 1122
BsaWI WCCGGW 1 cut(s) 765
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 55, 1595
Bse1I ACTGG 2 cut(s) 1000, 1452
Bse21I CCTNAGG 2 cut(s) 972, 1593
Bse3DI GCAATG 2 cut(s) 505, 1046
Bse8I GATNNNNATC 2 cut(s) 966, 1239
BseBI CCWGG 3 cut(s) 250, 560, 1335
BseCI ATCGAT 1 cut(s) 1422
BseDI CCNNGG 1 cut(s) 1122
BseGI GGATG 6 cut(s) 159, 338, 967, 1057, 1066, 1147
BseJI GATNNNNATC 2 cut(s) 966, 1239
BseLI CCNNNNNNNGG 3 cut(s) 54, 55, 1595
BseMI GCAATG 2 cut(s) 505, 1046
BseMII CTCAG 2 cut(s) 986, 1500
BseNI ACTGG 2 cut(s) 1000, 1452
BseSI GKGCMC 2 cut(s) 49, 1538
BseXI GCAGC 8 cut(s) 229, 295, 298, 835, 923, 1023, 1132, 1349
BseYI CCCAGC 1 cut(s) 782
BsgI GTGCAG 2 cut(s) 236, 297
Bsh1236I CGCG 1 cut(s) 647
Bsh1285I CGRYCG 1 cut(s) 579
BshFI GGCC 4 cut(s) 549, 635, 1536, 1646
BshNI GGYRCC 3 cut(s) 585, 1250, 1400
BshVI ATCGAT 1 cut(s) 1422
BsiEI CGRYCG 1 cut(s) 579
BsiHKAI GWGCWC 2 cut(s) 665, 765
BsiSI CCGG 2 cut(s) 766, 959
BslFI GGGAC 2 cut(s) 469, 1434
BslI CCNNNNNNNGG 3 cut(s) 54, 55, 1595
BsmAI GTCTC 5 cut(s) 39, 258, 463, 1460, 1721
BsmBI CGTCTC 1 cut(s) 463
BsmFI GGGAC 2 cut(s) 469, 1434
BsnI GGCC 4 cut(s) 549, 635, 1536, 1646
Bso31I GGTCTC 2 cut(s) 39, 258
Bsp119I TTCGAA 1 cut(s) 1010
Bsp120I GGGCCC 1 cut(s) 1534
Bsp1286I GDGCHC 5 cut(s) 49, 665, 765, 1096, 1538
Bsp143I GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
BspACI CCGC 7 cut(s) 49, 305, 450, 583, 611, 735, 909
BspANI GGCC 4 cut(s) 549, 635, 1536, 1646
BspCNI CTCAG 2 cut(s) 985, 1501
BspDI ATCGAT 1 cut(s) 1422
BspFNI CGCG 1 cut(s) 647
BspLI GGNNCC 6 cut(s) 587, 1093, 1252, 1402, 1536, 1702
BspMAI CTGCAG 1 cut(s) 1555
BspPI GGATC 6 cut(s) 959, 962, 1117, 1695, 1708, 1708
BspQI GCTCTTC 1 cut(s) 780
BspT104I TTCGAA 1 cut(s) 1010
BspT107I GGYRCC 3 cut(s) 585, 1250, 1400
BspTNI GGTCTC 2 cut(s) 39, 258
BsrBI CCGCTC 1 cut(s) 583
BsrDI GCAATG 2 cut(s) 505, 1046
BsrI ACTGG 2 cut(s) 1000, 1452
BssECI CCNNGG 1 cut(s) 1122
BssMI GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
BssNI GRCGYC 2 cut(s) 564, 586
BssT1I CCWWGG 1 cut(s) 1122
Bst2UI CCWGG 3 cut(s) 250, 560, 1335
Bst4CI ACNGT 2 cut(s) 193, 1288
Bst6I CTCTTC 2 cut(s) 42, 780
BstACI GRCGYC 2 cut(s) 564, 586
BstAPI GCANNNNNTGC 1 cut(s) 1505
BstBI TTCGAA 1 cut(s) 1010
BstC8I GCNNGC 4 cut(s) 49, 608, 925, 1624
BstDEI CTNAG 5 cut(s) 568, 972, 1509, 1561, 1593
BstF5I GGATG 6 cut(s) 159, 338, 967, 1057, 1066, 1147
BstFNI CGCG 1 cut(s) 647
BstH2I RGCGCY 2 cut(s) 589, 1629
BstHHI GCGC 4 cut(s) 588, 1066, 1628, 1671
BstKTI GATC 9 cut(s) 618, 954, 970, 1112, 1276, 1343, 1422, 1703, 1716
BstMAI GTCTC 5 cut(s) 39, 258, 463, 1460, 1721
BstMBI GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
BstMCI CGRYCG 1 cut(s) 579
BstNI CCWGG 3 cut(s) 250, 560, 1335
BstNSI RCATGY 1 cut(s) 1747
BstSCI CCNGG 4 cut(s) 248, 558, 957, 1333
BstSFI CTRYAG 3 cut(s) 601, 1494, 1551
BstSLI GKGCMC 2 cut(s) 49, 1538
BstUI CGCG 1 cut(s) 647
BstV1I GCAGC 8 cut(s) 229, 295, 298, 835, 923, 1023, 1132, 1349
BstV2I GAAGAC 1 cut(s) 1743
BstX2I RGATCY 5 cut(s) 967, 1109, 1273, 1700, 1713
BstXI CCANNNNNNTGG 2 cut(s) 30, 1683
BstYI RGATCY 5 cut(s) 967, 1109, 1273, 1700, 1713
Bsu15I ATCGAT 1 cut(s) 1422
Bsu36I CCTNAGG 2 cut(s) 972, 1593
BsuI GTATCC 1 cut(s) 668
BsuRI GGCC 4 cut(s) 549, 635, 1536, 1646
BsuTUI ATCGAT 1 cut(s) 1422
BtsCI GGATG 6 cut(s) 159, 338, 967, 1057, 1066, 1147
BtsIMutI CAGTG 3 cut(s) 757, 993, 1284
Cac8I GCNNGC 4 cut(s) 49, 608, 925, 1624
CaiI CAGNNNCTG 1 cut(s) 1502
CfoI GCGC 4 cut(s) 588, 1066, 1628, 1671
Cfr13I GGNCC 5 cut(s) 547, 556, 1300, 1534, 1535
ClaI ATCGAT 1 cut(s) 1422
CseI GACGC 2 cut(s) 653, 1628
CsiI ACCWGGT 2 cut(s) 248, 1333
Csp6I GTAC 2 cut(s) 1165, 1256
CviAII CATG 7 cut(s) 30, 980, 1432, 1636, 1642, 1721, 1744
CviQI GTAC 2 cut(s) 1165, 1256
DdeI CTNAG 5 cut(s) 568, 972, 1509, 1561, 1593
DinI GGCGCC 1 cut(s) 587
DpnI GATC 9 cut(s) 617, 953, 969, 1111, 1275, 1342, 1421, 1702, 1715
DpnII GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
DraIII CACNNNGTG 1 cut(s) 801
Eam1104I CTCTTC 2 cut(s) 42, 780
EarI CTCTTC 2 cut(s) 42, 780
Ecl136II GAGCTC 2 cut(s) 663, 763
Eco130I CCWWGG 1 cut(s) 1122
Eco147I AGGCCT 1 cut(s) 635
Eco24I GRGCYC 4 cut(s) 665, 765, 1096, 1538
Eco31I GGTCTC 2 cut(s) 39, 258
Eco47I GGWCC 2 cut(s) 556, 1300
Eco53kI GAGCTC 2 cut(s) 663, 763
Eco57I CTGAAG 2 cut(s) 275, 380
Eco81I CCTNAGG 2 cut(s) 972, 1593
EcoICRI GAGCTC 2 cut(s) 663, 763
EcoO109I RGGNCCY 2 cut(s) 547, 1535
EcoRI GAATTC 2 cut(s) 884, 1006
EcoRII CCWGG 3 cut(s) 248, 558, 1333
EcoT14I CCWWGG 1 cut(s) 1122
EcoT38I GRGCYC 4 cut(s) 665, 765, 1096, 1538
EgeI GGCGCC 1 cut(s) 587
EheI GGCGCC 1 cut(s) 587
ErhI CCWWGG 1 cut(s) 1122
Esp3I CGTCTC 1 cut(s) 463
FaeI CATG 7 cut(s) 33, 983, 1435, 1639, 1645, 1724, 1747
FaqI GGGAC 2 cut(s) 469, 1434
FatI CATG 7 cut(s) 29, 979, 1431, 1635, 1641, 1720, 1743
FauI CCCGC 1 cut(s) 56
FblI GTMKAC 1 cut(s) 1707
FokI GGATG 6 cut(s) 146, 325, 974, 1053, 1064, 1154
FriOI GRGCYC 4 cut(s) 665, 765, 1096, 1538
FspBI CTAG 1 cut(s) 1484
GlaI GCGC 4 cut(s) 587, 1065, 1627, 1670
GsaI CCCAGC 1 cut(s) 786
GsuI CTGGAG 1 cut(s) 1659
HaeII RGCGCY 2 cut(s) 589, 1629
HaeIII GGCC 4 cut(s) 549, 635, 1536, 1646
HapII CCGG 2 cut(s) 766, 959
HgaI GACGC 2 cut(s) 653, 1628
HhaI GCGC 4 cut(s) 588, 1066, 1628, 1671
Hin1I GRCGYC 2 cut(s) 564, 586
Hin1II CATG 7 cut(s) 33, 983, 1435, 1639, 1645, 1724, 1747
Hin6I GCGC 4 cut(s) 586, 1064, 1626, 1669
HinP1I GCGC 4 cut(s) 586, 1064, 1626, 1669
HincII GTYRAC 1 cut(s) 1372
HindII GTYRAC 1 cut(s) 1372
HinfI GANTC 6 cut(s) 113, 572, 1318, 1547, 1585, 1749
HpaII CCGG 2 cut(s) 766, 959
HphI GGTGA 1 cut(s) 610
Hpy166II GTNNAC 4 cut(s) 1223, 1372, 1615, 1708
Hpy188I TCNGA 9 cut(s) 197, 413, 446, 526, 674, 951, 1109, 1263, 1584
Hpy188III TCNNGA 8 cut(s) 328, 703, 1070, 1139, 1292, 1616, 1676, 1691
Hpy8I GTNNAC 4 cut(s) 1223, 1372, 1615, 1708
Hpy99I CGWCG 3 cut(s) 458, 632, 1622
HpyAV CCTTC 5 cut(s) 299, 851, 925, 1054, 1561
HpyCH4III ACNGT 2 cut(s) 193, 1288
HpyCH4IV ACGT 2 cut(s) 564, 627
HpyCH4V TGCA 8 cut(s) 217, 314, 804, 1039, 1352, 1553, 1635, 1724
HpyF3I CTNAG 5 cut(s) 568, 972, 1509, 1561, 1593
HpySE526I ACGT 2 cut(s) 564, 627
Hsp92I GRCGYC 2 cut(s) 564, 586
Hsp92II CATG 7 cut(s) 33, 983, 1435, 1639, 1645, 1724, 1747
HspAI GCGC 4 cut(s) 586, 1064, 1626, 1669
KasI GGCGCC 1 cut(s) 585
Kzo9I GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
LguI GCTCTTC 1 cut(s) 780
LmnI GCTCC 5 cut(s) 324, 768, 1091, 1495, 1598
Lsp1109I GCAGC 8 cut(s) 229, 295, 298, 835, 923, 1023, 1132, 1349
LweI GCATC 6 cut(s) 168, 1042, 1075, 1132, 1453, 1495
MabI ACCWGGT 2 cut(s) 248, 1333
MaeI CTAG 1 cut(s) 1484
MaeII ACGT 2 cut(s) 564, 627
MaeIII GTNAC 2 cut(s) 265, 1378
MalI GATC 9 cut(s) 617, 953, 969, 1111, 1275, 1342, 1421, 1702, 1715
MbiI CCGCTC 1 cut(s) 583
MboI GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
MboII GAAGA 8 cut(s) 29, 272, 275, 373, 767, 1184, 1706, 1748
MfeI CAATTG 1 cut(s) 725
MflI RGATCY 5 cut(s) 967, 1109, 1273, 1700, 1713
MhlI GDGCHC 5 cut(s) 49, 665, 765, 1096, 1538
MluI ACGCGT 1 cut(s) 645
Mly113I GGCGCC 1 cut(s) 586
MlyI GAGTC 2 cut(s) 1556, 1579
MmeI TCCRAC 5 cut(s) 436, 630, 810, 1069, 1607
MseI TTAA 7 cut(s) 122, 137, 351, 684, 810, 1161, 1662
MslI CAYNNNNRTG 5 cut(s) 28, 984, 1071, 1248, 1640
MspI CCGG 2 cut(s) 766, 959
MspR9I CCNGG 4 cut(s) 250, 560, 959, 1335
MunI CAATTG 1 cut(s) 725
MvaI CCWGG 3 cut(s) 250, 560, 1335
MvnI CGCG 1 cut(s) 647
NarI GGCGCC 1 cut(s) 586
NciI CCSGG 1 cut(s) 959
NdeII GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
NlaIII CATG 7 cut(s) 33, 983, 1435, 1639, 1645, 1724, 1747
NlaIV GGNNCC 6 cut(s) 587, 1093, 1252, 1402, 1536, 1702
NmuCI GTSAC 1 cut(s) 265
NspI RCATGY 1 cut(s) 1747
NspV TTCGAA 1 cut(s) 1010
PceI AGGCCT 1 cut(s) 635
PciSI GCTCTTC 1 cut(s) 780
PfeI GAWTC 4 cut(s) 113, 572, 1318, 1749
PflFI GACNNNGTC 1 cut(s) 31
PfoI TCCNGGA 1 cut(s) 558
PleI GAGTC 2 cut(s) 1555, 1579
PluTI GGCGCC 1 cut(s) 589
PpsI GAGTC 2 cut(s) 1555, 1579
PshBI ATTAAT 1 cut(s) 122
Psp124BI GAGCTC 2 cut(s) 665, 765
Psp6I CCWGG 3 cut(s) 248, 558, 1333
PspFI CCCAGC 1 cut(s) 782
PspGI CCWGG 3 cut(s) 248, 558, 1333
PspN4I GGNNCC 6 cut(s) 587, 1093, 1252, 1402, 1536, 1702
PspOMI GGGCCC 1 cut(s) 1534
PspPI GGNCC 5 cut(s) 547, 556, 1300, 1534, 1535
PstI CTGCAG 1 cut(s) 1555
PstNI CAGNNNCTG 1 cut(s) 1502
PsuI RGATCY 5 cut(s) 967, 1109, 1273, 1700, 1713
PsyI GACNNNGTC 1 cut(s) 31
RsaI GTAC 2 cut(s) 1166, 1257
RsaNI GTAC 2 cut(s) 1165, 1256
RseI CAYNNNNRTG 5 cut(s) 28, 984, 1071, 1248, 1640
SacI GAGCTC 2 cut(s) 665, 765
SapI GCTCTTC 1 cut(s) 780
SaqAI TTAA 7 cut(s) 122, 137, 351, 684, 810, 1161, 1662
Sau3AI GATC 9 cut(s) 615, 951, 967, 1109, 1273, 1340, 1419, 1700, 1713
Sau96I GGNCC 5 cut(s) 547, 556, 1300, 1534, 1535
SchI GAGTC 2 cut(s) 1556, 1579
ScrFI CCNGG 4 cut(s) 250, 560, 959, 1335
SduI GDGCHC 5 cut(s) 49, 665, 765, 1096, 1538
SexAI ACCWGGT 2 cut(s) 248, 1333
SfaNI GCATC 6 cut(s) 168, 1042, 1075, 1132, 1453, 1495
SfcI CTRYAG 3 cut(s) 601, 1494, 1551
SfoI GGCGCC 1 cut(s) 587
SfuI TTCGAA 1 cut(s) 1010
SinI GGWCC 2 cut(s) 556, 1300
SmiMI CAYNNNNRTG 5 cut(s) 28, 984, 1071, 1248, 1640
SmlI CTYRAG 3 cut(s) 551, 701, 1185
SmoI CTYRAG 3 cut(s) 551, 701, 1185
SpeI ACTAGT 1 cut(s) 1483
SseBI AGGCCT 1 cut(s) 635
SsiI CCGC 7 cut(s) 49, 305, 450, 583, 611, 735, 909
SspDI GGCGCC 1 cut(s) 585
SspI AATATT 1 cut(s) 874
SspMI CTAG 1 cut(s) 1484
SstI GAGCTC 2 cut(s) 665, 765
StuI AGGCCT 1 cut(s) 635
StyD4I CCNGG 4 cut(s) 248, 558, 957, 1333
StyI CCWWGG 1 cut(s) 1122
TaaI ACNGT 2 cut(s) 193, 1288
TaiI ACGT 2 cut(s) 567, 630
TaqII GACCGA 1 cut(s) 565
TatI WGTACW 1 cut(s) 1164
TauI GCSGC 5 cut(s) 308, 452, 586, 613, 911
TfiI GAWTC 4 cut(s) 113, 572, 1318, 1749
Tru1I TTAA 7 cut(s) 122, 137, 351, 684, 810, 1161, 1662
Tru9I TTAA 7 cut(s) 122, 137, 351, 684, 810, 1161, 1662
TscAI CASTG 3 cut(s) 757, 1000, 1291
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 8 cut(s) 217, 308, 311, 848, 911, 1036, 1145, 1362
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 3 cut(s) 5, 195, 968
TspGWI ACGGA 6 cut(s) 52, 120, 1169, 1436, 1693, 1706
TspRI CASTG 3 cut(s) 757, 1000, 1291
Tth111I GACNNNGTC 1 cut(s) 31
VpaK11BI GGWCC 2 cut(s) 556, 1300
VspI ATTAAT 1 cut(s) 122
XapI RAATTY 5 cut(s) 518, 884, 1006, 1013, 1354
XceI RCATGY 1 cut(s) 1747
XcmI CCANNNNNNNNNTGG 1 cut(s) 1123
XmiI GTMKAC 1 cut(s) 1707
XspI CTAG 1 cut(s) 1484
ZraI GACGTC 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.