pycom10g06030

Guanine nucleotide-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0010337
Physical Location & Seq
Forward (+)
6790174 .. 6794630
4457 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g06030.2

Sequence Viewer

Length: 1137 bp
ATGTCAGTTGCGGAGCTTAAAGAGCGCCACGTGGTGGCGAGCGACACCGTCAACTCGCTCAGAGAGCGGTTGAAGCAGAAGCGCGCCTCCTTGCTCGACACTGATGTGGCTGGGTATGCAAGGTCTCAGGGGAAGACTCCGCTCACATTTGGCCCCACCGATCTTGTGTGCTGCAGAACCTTGCAAGGTCATACAGGGAAGGTGTATTCGTTAGATTGGACCTCTGAAAAGAATCGAATTGTCAGTGCATCTCAAGACGGTCGTTTGATAGTGTGGAATGCACTAACAAGCCAGAAGACTCATGCTATAAAATTACCTTGTGCATGGGTCATGACTTGTGCTTTCTCACCGACTGGTCAATCTGTTGCTTGTGGTGGCCTTGATAGTGCTTGCTCTATTTTCAACCTGAATTCTCTGTGCGACAAGGATGGGAATCTACCTGTATCAAGAACACTTAATGGGCATAAGGGTTATGTTTCCTCCTGTCAATACGTTCCAGATGAGGACATCCACCTGATTACTGGATCTGGAGATCATACATGTGTTTTGTGGGATATTACTACTGGACTCAGGACTTCAGTTTTTGGAGGTGAATTTCAGTCTGGACGACACACTGCAGATGTACTGAGTGTATCCATCAATCAAAGCAACTCAAGATTGTTTGTCTCTGGTTCTTGTGATACAACTGCTCGATTGTGGGACACTCGTGTTGCAAGTCGAGCAGTGCGAACATTTCATGGTCATGAGGGGGATGTTAATGTGGTAAAGTTCTTTCCAGATGGAAATAGATTTGGAACTGGCTCAGATGATGGAACTTGCAGATTATTTGACATTAGAACTGGGCACCAACTCCAAGTATACCATCAGCCACACAGTGATAATGATGTGCCACCTGTGAAAACAATTGCATTCTCAATATCAGGAAGGCTTCTCTTCGCTGGATACACAAATGGGGATTGCTATGTATGGGATACTTTGTTGGCAAAGGTGGTTTTGAACTTGGGATCCCTCCAAACCTCACACGAGGCACAAATTAGCTGTTTGGGTTTGTCGGCTGATGGAAGTGCCTTGTGTACGGGAAGTTGGGATACAAATTTAAAGATATGGGCTTTCGGAGGGCATAGGAAAATAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005834 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0006986 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009753 GO:0009755 GO:0009787 GO:0009788 GO:0009791 GO:0009814 GO:0009817 GO:0009845 GO:0009867 GO:0009898 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010033 GO:0010118 GO:0010154 GO:0010646 GO:0010648 GO:0012505 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019897 GO:0019898 GO:0022414 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0030968 GO:0031234 GO:0031461 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045087 GO:0048364 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0072593 GO:0080008 GO:0090351 GO:0090696 GO:0098542 GO:0098552 GO:0098562 GO:0098796 GO:0098797 GO:0099402 GO:1901419 GO:1901420 GO:1901700 GO:1901701 GO:1902494 GO:1905360 GO:1905392 GO:1905957 GO:1905958 GO:1990234 GO:2000026 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04011 ko04014 ko04062 ko04151 ko04371 ko04713 ko04723 ko04724 ko04725 ko04726 ko04727 ko04728 ko04740 ko04744 ko04926 ko05032 ko05034 ko05167 ko05200 map04011 map04014 map04062 map04151 map04371 map04713 map04723 map04724 map04725 map04726 map04727 map04728 map04740 map04744 map04926 map05032 map05034 map05167 map05200
Pfam Domains
Protein Families
WD40

Protein Analysis

379

Amino Acids

41.08

Weight (kDa)

7.57

Isoelectric Point (pI)

30.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34460 AT4G34460 AT4G34460 AT4G34460
fragaria_vesca FvH4_2g08680 FvH4_2g08680
malus_domestica MD05G1067400.v1.1 MD10G1077300.v1.1
prunus_persica Prupe.8G098100_v2.0.a1
pyrus_communis pycom05g05850 pycom10g06030
rosa_chinensis RchiOBHm_Chr6g0264111
rosa_laevigata RLG00000014290
rosa_multiflora Rmu_sc0002305.1_g000002
rosa_roxburghii Rroxscaffold_176G00431420 Rroxscaffold_7G00203590
rosa_rugosa Rorug06G0007600
rosa_samantha Rh6AG129200 Rh6CG124200 Rh6DG111100
rosa_wichuraiana Rw6G011170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 843
AccB7I CCANNNNNTGG 1 cut(s) 34
AccBSI CCGCTC 2 cut(s) 67, 142
AccI GTMKAC 1 cut(s) 858
AccII CGCG 1 cut(s) 84
AciI CCGC 3 cut(s) 11, 67, 140
AclWI GGATC 3 cut(s) 532, 999, 1012
AcsI RAATTY 3 cut(s) 409, 593, 1093
AcuI CTGAAG 1 cut(s) 561
AcvI CACGTG 1 cut(s) 31
AdeI CACNNNGTG 2 cut(s) 34, 875
AfaI GTAC 2 cut(s) 624, 1075
AfiI CCNNNNNNNGG 1 cut(s) 34
AflIII ACRYGT 1 cut(s) 539
AgsI TTSAA 3 cut(s) 73, 403, 997
AleI CACNNNNGTG 1 cut(s) 104
AloI GAACNNNNNNTCC 2 cut(s) 989, 1021
AluBI AGCT 2 cut(s) 16, 1038
AluI AGCT 2 cut(s) 16, 1038
Alw26I GTCTC 2 cut(s) 129, 670
AlwI GGATC 3 cut(s) 532, 999, 1012
AoxI GGCC 2 cut(s) 151, 376
ApeKI GCWGC 1 cut(s) 171
ApoI RAATTY 3 cut(s) 409, 593, 1093
AspLEI GCGC 3 cut(s) 27, 84, 86
AspS9I GGNCC 2 cut(s) 152, 219
AsuHPI GGTGA 2 cut(s) 339, 602
AvaII GGWCC 1 cut(s) 219
BaeGI GKGCMC 1 cut(s) 846
BamHI GGATCC 1 cut(s) 1004
BanI GGYRCC 1 cut(s) 843
BarI GAAGNNNNNNTAC 2 cut(s) 1072, 1104
BauI CACGAG 2 cut(s) 705, 1022
BbrPI CACGTG 1 cut(s) 31
BbsI GAAGAC 2 cut(s) 140, 302
BbvI GCAGC 1 cut(s) 158
BccI CCATC 6 cut(s) 422, 644, 773, 803, 870, 1052
BciVI GTATCC 4 cut(s) 643, 935, 964, 1081
BcoDI GTCTC 2 cut(s) 129, 670
BfmI CTRYAG 2 cut(s) 172, 615
BfoI RGCGCY 1 cut(s) 28
BfuI GTATCC 4 cut(s) 643, 935, 964, 1081
BisI GCNGC 1 cut(s) 172
BlsI GCNGC 1 cut(s) 173
Bme18I GGWCC 1 cut(s) 219
BmgT120I GGNCC 2 cut(s) 152, 219
BmiI GGNNCC 3 cut(s) 154, 845, 1006
BmrI ACTGGG 1 cut(s) 849
BmsI GCATC 1 cut(s) 257
BmuI ACTGGG 1 cut(s) 849
BpiI GAAGAC 2 cut(s) 140, 302
BpmI CTGGAG 1 cut(s) 549
BpuEI CTTGAG 2 cut(s) 237, 637
BsaAI YACGTR 1 cut(s) 31
BsaBI GATNNNNATC 1 cut(s) 432
BsaI GGTCTC 1 cut(s) 129
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse1I ACTGG 5 cut(s) 358, 526, 568, 802, 844
Bse8I GATNNNNATC 1 cut(s) 432
BseGI GGATG 3 cut(s) 433, 507, 757
BseJI GATNNNNATC 1 cut(s) 432
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMII CTCAG 5 cut(s) 73, 140, 583, 617, 816
BseNI ACTGG 5 cut(s) 358, 526, 568, 802, 844
BsePI GCGCGC 1 cut(s) 82
BseSI GKGCMC 1 cut(s) 846
BseXI GCAGC 1 cut(s) 158
BseYI CCCAGC 1 cut(s) 110
Bsh1236I CGCG 1 cut(s) 84
Bsh1285I CGRYCG 1 cut(s) 262
BshFI GGCC 2 cut(s) 153, 378
BshNI GGYRCC 1 cut(s) 843
BsiEI CGRYCG 1 cut(s) 262
BslFI GGGAC 1 cut(s) 713
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 2 cut(s) 129, 670
BsmFI GGGAC 1 cut(s) 713
BsmI GAATGC 2 cut(s) 283, 908
BsnI GGCC 2 cut(s) 153, 378
Bso31I GGTCTC 1 cut(s) 129
Bsp1286I GDGCHC 1 cut(s) 846
Bsp143I GATC 4 cut(s) 160, 524, 532, 1004
BspACI CCGC 3 cut(s) 11, 67, 140
BspANI GGCC 2 cut(s) 153, 378
BspCNI CTCAG 5 cut(s) 72, 139, 582, 618, 815
BspFNI CGCG 1 cut(s) 84
BspHI TCATGA 2 cut(s) 330, 742
BspLI GGNNCC 3 cut(s) 154, 845, 1006
BspMAI CTGCAG 2 cut(s) 176, 619
BspPI GGATC 3 cut(s) 532, 999, 1012
BspT107I GGYRCC 1 cut(s) 843
BspTNI GGTCTC 1 cut(s) 129
BsrBI CCGCTC 2 cut(s) 67, 142
BsrI ACTGG 5 cut(s) 358, 526, 568, 802, 844
BssHII GCGCGC 1 cut(s) 82
BssMI GATC 4 cut(s) 160, 524, 532, 1004
BssNAI GTATAC 1 cut(s) 859
BssSI CACGAG 2 cut(s) 705, 1022
Bst1107I GTATAC 1 cut(s) 859
Bst2BI CACGAG 2 cut(s) 705, 1022
Bst4CI ACNGT 3 cut(s) 49, 260, 875
Bst6I CTCTTC 1 cut(s) 938
BstBAI YACGTR 1 cut(s) 31
BstC8I GCNNGC 3 cut(s) 40, 84, 391
BstDEI CTNAG 5 cut(s) 59, 126, 569, 626, 802
BstF5I GGATG 3 cut(s) 433, 507, 757
BstFNI CGCG 1 cut(s) 84
BstH2I RGCGCY 1 cut(s) 28
BstHHI GCGC 3 cut(s) 27, 84, 86
BstKTI GATC 4 cut(s) 163, 527, 535, 1007
BstMAI GTCTC 2 cut(s) 129, 670
BstMBI GATC 4 cut(s) 160, 524, 532, 1004
BstMCI CGRYCG 1 cut(s) 262
BstMWI GCNNNNNNNGC 5 cut(s) 22, 64, 73, 116, 719
BstNSI RCATGY 1 cut(s) 543
BstSFI CTRYAG 2 cut(s) 172, 615
BstSLI GKGCMC 1 cut(s) 846
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 1 cut(s) 158
BstV2I GAAGAC 2 cut(s) 140, 302
BstX2I RGATCY 2 cut(s) 524, 1004
BstYI RGATCY 2 cut(s) 524, 1004
BstZ17I GTATAC 1 cut(s) 859
BsuI GTATCC 4 cut(s) 643, 935, 964, 1081
BsuRI GGCC 2 cut(s) 153, 378
BtsCI GGATG 3 cut(s) 433, 507, 757
BtsI GCAGTG 2 cut(s) 612, 729
BtsIMutI CAGTG 5 cut(s) 99, 250, 612, 729, 880
Cac8I GCNNGC 3 cut(s) 40, 84, 391
CciI TCATGA 2 cut(s) 330, 742
CfoI GCGC 3 cut(s) 27, 84, 86
Cfr13I GGNCC 2 cut(s) 152, 219
Csp6I GTAC 2 cut(s) 623, 1074
CspCI CAANNNNNGTGG 2 cut(s) 145, 180
CviAII CATG 6 cut(s) 302, 324, 331, 540, 737, 743
CviQI GTAC 2 cut(s) 623, 1074
DdeI CTNAG 5 cut(s) 59, 126, 569, 626, 802
DpnI GATC 4 cut(s) 162, 526, 534, 1006
DpnII GATC 4 cut(s) 160, 524, 532, 1004
DraI TTTAAA 1 cut(s) 1098
DraIII CACNNNGTG 2 cut(s) 34, 875
Eam1104I CTCTTC 1 cut(s) 938
EarI CTCTTC 1 cut(s) 938
Eco31I GGTCTC 1 cut(s) 129
Eco47I GGWCC 1 cut(s) 219
Eco57I CTGAAG 1 cut(s) 561
Eco72I CACGTG 1 cut(s) 31
EcoRI GAATTC 1 cut(s) 409
FaeI CATG 6 cut(s) 305, 327, 334, 543, 740, 746
FaqI GGGAC 1 cut(s) 713
FatI CATG 6 cut(s) 301, 323, 330, 539, 736, 742
FblI GTMKAC 1 cut(s) 858
Fnu4HI GCNGC 1 cut(s) 172
FokI GGATG 3 cut(s) 440, 494, 764
Fsp4HI GCNGC 1 cut(s) 172
GlaI GCGC 3 cut(s) 26, 83, 85
GluI GCNGC 1 cut(s) 172
GsaI CCCAGC 1 cut(s) 114
GsuI CTGGAG 1 cut(s) 549
HaeII RGCGCY 1 cut(s) 28
HaeIII GGCC 2 cut(s) 153, 378
HhaI GCGC 3 cut(s) 27, 84, 86
Hin1II CATG 6 cut(s) 305, 327, 334, 543, 740, 746
Hin6I GCGC 3 cut(s) 25, 82, 84
HinP1I GCGC 3 cut(s) 25, 82, 84
HincII GTYRAC 1 cut(s) 52
HindII GTYRAC 1 cut(s) 52
HinfI GANTC 5 cut(s) 136, 232, 298, 433, 567
HphI GGTGA 2 cut(s) 339, 602
Hpy166II GTNNAC 3 cut(s) 52, 859, 1074
Hpy188I TCNGA 4 cut(s) 62, 226, 805, 1115
Hpy8I GTNNAC 3 cut(s) 52, 859, 1074
HpyAV CCTTC 2 cut(s) 193, 918
HpyCH4III ACNGT 3 cut(s) 49, 260, 875
HpyCH4IV ACGT 2 cut(s) 30, 492
HpyF10VI GCNNNNNNNGC 5 cut(s) 22, 64, 73, 116, 719
HpyF3I CTNAG 5 cut(s) 59, 126, 569, 626, 802
HpySE526I ACGT 2 cut(s) 30, 492
Hsp92II CATG 6 cut(s) 305, 327, 334, 543, 740, 746
HspAI GCGC 3 cut(s) 25, 82, 84
Kzo9I GATC 4 cut(s) 160, 524, 532, 1004
LmnI GCTCC 1 cut(s) 13
Lsp1109I GCAGC 1 cut(s) 158
LweI GCATC 1 cut(s) 257
MaeII ACGT 2 cut(s) 30, 492
MalI GATC 4 cut(s) 162, 526, 534, 1006
MbiI CCGCTC 2 cut(s) 67, 142
MboI GATC 4 cut(s) 160, 524, 532, 1004
MboII GAAGA 3 cut(s) 145, 307, 925
MfeI CAATTG 1 cut(s) 903
MflI RGATCY 2 cut(s) 524, 1004
MhlI GDGCHC 1 cut(s) 846
MluCI AATT 8 cut(s) 237, 311, 409, 593, 903, 1032, 1093, 1131
MlyI GAGTC 3 cut(s) 130, 292, 561
MseI TTAA 4 cut(s) 18, 456, 756, 1097
MslI CAYNNNNRTG 3 cut(s) 104, 540, 741
MunI CAATTG 1 cut(s) 903
Mva1269I GAATGC 2 cut(s) 283, 908
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 5 cut(s) 22, 64, 73, 116, 719
NdeII GATC 4 cut(s) 160, 524, 532, 1004
NlaIII CATG 6 cut(s) 305, 327, 334, 543, 740, 746
NlaIV GGNNCC 3 cut(s) 154, 845, 1006
NspI RCATGY 1 cut(s) 543
OliI CACNNNNGTG 1 cut(s) 104
PagI TCATGA 2 cut(s) 330, 742
PauI GCGCGC 1 cut(s) 82
PciI ACATGT 1 cut(s) 539
PcsI WCGNNNNNNNCGW 1 cut(s) 724
PctI GAATGC 2 cut(s) 283, 908
PfeI GAWTC 2 cut(s) 232, 433
PflFI GACNNNGTC 1 cut(s) 47
PflMI CCANNNNNTGG 1 cut(s) 34
PkrI GCNGC 1 cut(s) 173
PleI GAGTC 3 cut(s) 130, 292, 561
PmaCI CACGTG 1 cut(s) 31
PmlI CACGTG 1 cut(s) 31
PpsI GAGTC 3 cut(s) 130, 292, 561
Ppu21I YACGTR 1 cut(s) 31
PscI ACATGT 1 cut(s) 539
PspCI CACGTG 1 cut(s) 31
PspFI CCCAGC 1 cut(s) 110
PspN4I GGNNCC 3 cut(s) 154, 845, 1006
PspPI GGNCC 2 cut(s) 152, 219
PstI CTGCAG 2 cut(s) 176, 619
PsuI RGATCY 2 cut(s) 524, 1004
PsyI GACNNNGTC 1 cut(s) 47
PteI GCGCGC 1 cut(s) 82
RsaI GTAC 2 cut(s) 624, 1075
RsaNI GTAC 2 cut(s) 623, 1074
RseI CAYNNNNRTG 3 cut(s) 104, 540, 741
SaqAI TTAA 4 cut(s) 18, 456, 756, 1097
SatI GCNGC 1 cut(s) 172
Sau3AI GATC 4 cut(s) 160, 524, 532, 1004
Sau96I GGNCC 2 cut(s) 152, 219
SchI GAGTC 3 cut(s) 130, 292, 561
SduI GDGCHC 1 cut(s) 846
SfaNI GCATC 1 cut(s) 257
SfcI CTRYAG 2 cut(s) 172, 615
SinI GGWCC 1 cut(s) 219
SmiMI CAYNNNNRTG 3 cut(s) 104, 540, 741
SmlI CTYRAG 2 cut(s) 252, 652
SmoI CTYRAG 2 cut(s) 252, 652
Sse9I AATT 8 cut(s) 237, 311, 409, 593, 903, 1032, 1093, 1131
SsiI CCGC 3 cut(s) 11, 67, 140
TaaI ACNGT 3 cut(s) 49, 260, 875
TaiI ACGT 2 cut(s) 33, 495
TaqI TCGA 4 cut(s) 96, 235, 691, 718
TasI AATT 8 cut(s) 237, 311, 409, 593, 903, 1032, 1093, 1131
TatI WGTACW 1 cut(s) 622
TfiI GAWTC 2 cut(s) 232, 433
Tru1I TTAA 4 cut(s) 18, 456, 756, 1097
Tru9I TTAA 4 cut(s) 18, 456, 756, 1097
TscAI CASTG 5 cut(s) 106, 250, 619, 729, 880
TseI GCWGC 1 cut(s) 171
TspDTI ATGAA 1 cut(s) 725
TspRI CASTG 5 cut(s) 106, 250, 619, 729, 880
Tth111I GACNNNGTC 1 cut(s) 47
Van91I CCANNNNNTGG 1 cut(s) 34
VpaK11BI GGWCC 1 cut(s) 219
XapI RAATTY 3 cut(s) 409, 593, 1093
XceI RCATGY 1 cut(s) 543
XcmI CCANNNNNNNNNTGG 1 cut(s) 518
XmiI GTMKAC 1 cut(s) 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.