pycom10g08620

Deoxynucleoside kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
11373792 .. 11377237
3446 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1764 bp
ATGCAGAAACTGCTTCGTATAAGCTCATCAGGCCCCATTCTCTGCACTTCGGCTAAGGCCGCCCCTCTTTCTTCTCTCCCCTTTGCTTCTGACCTTCTATCGAAAGCTCTCAGCGTCTCACCCAATAAACCTCCAACAATGCACGCTGCTGCAACTGCAGCTTTTCCCGGCGGCGGCGGCGGCTCGGCCCTCGCCTCTACCATTCACTACAAACCCACTTCCAGTACTCCCTCCTCTCGCTCCAACTGCGGCCTCTGCCGCTGCTCTGTCTCTGTCGGCGGCAGAACCTCATCCCGGGCTTGGCTTGTCCTCAAAGACTCCGGCTTGGGCTCTCGCCCGGCGTGGCTACACACGAGCTCTGATGGGTCATTTTCTGTTTCCGCCGTGGAGGGTTGCAAGATTTTAGAGGAGGGTTTTGAGGGTTTGGGCGGTGGCGCTGGTGAAAACTCTGAAAAGGTTTCGGGGGATGAGAAGCCGAATAGGTTGAGTCGGCGACAGAGGGGATCTGTAGACGGTGGTTTGTTGGCCGGAAGCCCGGACTTGTTGGCGATTCCTGGTGTGGGGCCGAGGAACTTGAAGAAGCTGATGCAAAAGGGTATTGGGGGAGTTGCCGAGCTCAAGCAATTGTACAAAGATAAGTTCTTCGGAAAATCTAGTGAGAAGATGGTTGAGTTTTTACGAAGTTCAGTAGGAATCATCCACAAAAACCATGCTGAGAGTATCACTACTTATATTAAAGAGAGTGTCGATGAAGAATCGAAGGAGGACGGCTCGAACTCAGAACTGAAGCTAAAGCAGAAGAAACGACTTACTTTCTGCGTTGAAGGAAACATCAGTGTTGGAAAGTCAACATTTCTTCAGAGAATAGCAAATGAAACACTTGAGTTAAGAGATCGTGTTGAGGTGGTTCCAGAACCTATTAATAAGTGGCAAGATGTTGGCCCTGACCATTTTAATATATTGGATGCTTTCTATGCTCATCCAGAGAGATATGCCTATACCTTCCAGAATTATGTTTTTGTTACAAGGTTAATGCAGGAGAGAGAATCCTCTGGTGGTATGAAGCCCCTCCGGTTGATGGAAAGGAGTGTTTTTAGTGACAGGATGGTTTTCGTTCGAGCGGTTCATGAAGCGAAATGGATGAATGAGATGGAGATCAGTATCTATGACTCCTGGTTTGACCCAGTTGTATCATCCTTGCCCGGGCTTGTCCCTGATGGTTTCATATATCTGAGAGCAAGTCCTGATACTTGTCACCAGAGAATGAAGCTACGCAAGAGAGCAGAGGAAGATCAAGTCAGCCTAGAGTATCTCCGCGGCTTACATGAAAAACATGAAAGCTGGCTTTTCCCATTCGAGAGTGGCAATCATGGTGTATTGTCCATTAGTAAGCCTGCCTTACAAATAGACAGCTCATTACCTTCTGATATCAGGGACCGTGTGTTCTATTTGCAGGGTGATCATATGCATTCCAGCATTCAGAAGGTTCCTGCTTTGGTTCTTGACTGTGAGCCAAACATTGATTTTAACAAAGACATTGACGCAAAGAGGCAGTATGCTCGACAAGTAGCGGAGTTTTTTGAGTTTGTGAAGAAAACACAAGAAGTTCCATCTGCAAAAAGTTCTGCAGAAGCCAAGAAGACTAGCCAACAACAAATTCTGCTGCCACGAAATGGAGAATTATGGGTTCCTGATAAGCATTTTCCTGGGTCGGCCCTCAAATCTTTGGATTTTAGACGAGCCATGTCTTTCATGTCGGGCTAA

Protein Analysis

588

Amino Acids

64.87

Weight (kDa)

8.86

Isoelectric Point (pI)

55.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
dNK PF01712 272 - 526 2.1e-49 Deoxynucleoside kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012467)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1673
AccBSI CCGCTC 1 cut(s) 1121
AccI GTMKAC 1 cut(s) 510
AccII CGCG 1 cut(s) 1317
AclWI GGATC 1 cut(s) 511
AcoI YGGCCR 1 cut(s) 525
AcsI RAATTY 1 cut(s) 1656
AcuI CTGAAG 2 cut(s) 806, 842
AfaI GTAC 2 cut(s) 226, 629
AfiI CCNNNNNNNGG 7 cut(s) 173, 294, 300, 560, 1078, 1203, 1673
AgsI TTSAA 2 cut(s) 577, 824
AjnI CCWGG 3 cut(s) 553, 1172, 1705
AjuI GAANNNNNNNTTGG 2 cut(s) 1641, 1673
AloI GAACNNNNNNTCC 2 cut(s) 1427, 1459
Alw21I GWGCWC 2 cut(s) 359, 618
Alw26I GTCTC 2 cut(s) 121, 274
AlwI GGATC 1 cut(s) 511
AlwNI CAGNNNCTG 1 cut(s) 10
Ama87I CYCGRG 2 cut(s) 294, 1202
AoxI GGCC 8 cut(s) 31, 57, 186, 250, 525, 563, 940, 1713
ApeKI GCWGC 5 cut(s) 146, 149, 158, 261, 1663
ApoI RAATTY 1 cut(s) 1656
ArsI GACNNNNNNTTYG 2 cut(s) 1160, 1192
AseI ATTAAT 1 cut(s) 921
AspLEI GCGC 1 cut(s) 437
AspS9I GGNCC 6 cut(s) 32, 187, 563, 941, 1435, 1714
AsuC2I CCSGG 7 cut(s) 168, 295, 296, 338, 536, 1203, 1204
AsuHPI GGTGA 4 cut(s) 111, 452, 1247, 1469
AvaI CYCGRG 2 cut(s) 294, 1202
AvaII GGWCC 1 cut(s) 1435
BanII GRGCYC 3 cut(s) 332, 359, 618
BauI CACGAG 1 cut(s) 352
BbsI GAAGAC 1 cut(s) 1646
Bbv12I GWGCWC 2 cut(s) 359, 618
BbvI GCAGC 5 cut(s) 133, 136, 170, 248, 1650
BccI CCATC 7 cut(s) 356, 658, 1072, 1099, 1144, 1211, 1618
BceAI ACGGC 2 cut(s) 368, 784
BcgI CGANNNNNNTGC 2 cut(s) 1541, 1575
BciT130I CCWGG 3 cut(s) 555, 1174, 1707
BclI TGATCA 1 cut(s) 1459
BcnI CCSGG 7 cut(s) 168, 295, 296, 338, 536, 1203, 1204
BcoDI GTCTC 2 cut(s) 121, 274
BfaI CTAG 3 cut(s) 654, 1304, 1644
BfmI CTRYAG 3 cut(s) 156, 507, 1626
BfoI RGCGCY 1 cut(s) 438
BmcAI AGTACT 1 cut(s) 226
Bme18I GGWCC 1 cut(s) 1435
BmeT110I CYCGRG 2 cut(s) 294, 1202
BmgT120I GGNCC 6 cut(s) 32, 187, 563, 941, 1435, 1714
BmiI GGNNCC 6 cut(s) 34, 564, 909, 1436, 1488, 1689
BmrI ACTGGG 1 cut(s) 1178
BmsI GCATC 2 cut(s) 576, 955
BmuI ACTGGG 1 cut(s) 1178
BpiI GAAGAC 1 cut(s) 1646
BplI GAGNNNNNCTC 2 cut(s) 755, 787
Bpu10I CCTNAGC 1 cut(s) 54
BpuEI CTTGAG 2 cut(s) 602, 902
BpuMI CCSGG 7 cut(s) 168, 295, 296, 338, 536, 1203, 1204
BsaBI GATNNNNATC 2 cut(s) 1154, 1160
BsaJI CCNNGG 6 cut(s) 294, 384, 566, 1202, 1315, 1706
BsaWI WCCGGW 1 cut(s) 1071
Bsc4I CCNNNNNNNGG 7 cut(s) 173, 294, 300, 560, 1078, 1203, 1673
Bse1I ACTGG 2 cut(s) 222, 1184
Bse8I GATNNNNATC 2 cut(s) 1154, 1160
BseBI CCWGG 3 cut(s) 555, 1174, 1707
BseDI CCNNGG 6 cut(s) 294, 384, 566, 1202, 1315, 1706
BseGI GGATG 8 cut(s) 290, 472, 696, 970, 979, 1110, 1146, 1193
BseJI GATNNNNATC 2 cut(s) 1154, 1160
BseLI CCNNNNNNNGG 7 cut(s) 173, 294, 300, 560, 1078, 1203, 1673
BseMII CTCAG 4 cut(s) 124, 705, 792, 1223
BseNI ACTGG 2 cut(s) 222, 1184
BseRI GAGGAG 2 cut(s) 223, 422
BseXI GCAGC 5 cut(s) 133, 136, 170, 248, 1650
BsgI GTGCAG 1 cut(s) 28
Bsh1236I CGCG 1 cut(s) 1317
BshFI GGCC 8 cut(s) 33, 59, 188, 252, 527, 565, 942, 1715
BsiHKAI GWGCWC 2 cut(s) 359, 618
BsiHKCI CYCGRG 2 cut(s) 294, 1202
BsiSI CCGG 8 cut(s) 168, 295, 321, 338, 528, 536, 1072, 1203
BslFI GGGAC 2 cut(s) 1196, 1448
BslI CCNNNNNNNGG 7 cut(s) 173, 294, 300, 560, 1078, 1203, 1673
BsmAI GTCTC 2 cut(s) 121, 274
BsmBI CGTCTC 1 cut(s) 121
BsmFI GGGAC 2 cut(s) 1196, 1448
BsmI GAATGC 2 cut(s) 1468, 1476
BsnI GGCC 8 cut(s) 33, 59, 188, 252, 527, 565, 942, 1715
BsoBI CYCGRG 2 cut(s) 294, 1202
Bsp1286I GDGCHC 3 cut(s) 332, 359, 618
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 5 cut(s) 503, 892, 1155, 1291, 1459
BspANI GGCC 8 cut(s) 33, 59, 188, 252, 527, 565, 942, 1715
BspCNI CTCAG 4 cut(s) 123, 706, 791, 1224
BspFNI CGCG 1 cut(s) 1317
BspHI TCATGA 1 cut(s) 1126
BspLI GGNNCC 6 cut(s) 34, 564, 909, 1436, 1488, 1689
BspMAI CTGCAG 2 cut(s) 160, 1630
BspPI GGATC 1 cut(s) 511
BsrBI CCGCTC 1 cut(s) 1121
BsrGI TGTACA 1 cut(s) 627
BsrI ACTGG 2 cut(s) 222, 1184
BssECI CCNNGG 6 cut(s) 294, 384, 566, 1202, 1315, 1706
BssMI GATC 5 cut(s) 503, 892, 1155, 1291, 1459
BssSI CACGAG 1 cut(s) 352
Bst2BI CACGAG 1 cut(s) 352
Bst2UI CCWGG 3 cut(s) 555, 1174, 1707
Bst4CI ACNGT 3 cut(s) 515, 1439, 1508
BstAPI GCANNNNNTGC 1 cut(s) 10
BstAUI TGTACA 1 cut(s) 627
BstC8I GCNNGC 3 cut(s) 144, 1343, 1395
BstDEI CTNAG 5 cut(s) 54, 110, 714, 778, 1232
BstDSI CCRYGG 2 cut(s) 384, 1315
BstF5I GGATG 8 cut(s) 290, 472, 696, 970, 979, 1110, 1146, 1193
BstFNI CGCG 1 cut(s) 1317
BstH2I RGCGCY 1 cut(s) 438
BstHHI GCGC 1 cut(s) 437
BstKTI GATC 5 cut(s) 506, 895, 1158, 1294, 1462
BstMAI GTCTC 2 cut(s) 121, 274
BstMBI GATC 5 cut(s) 503, 892, 1155, 1291, 1459
BstNI CCWGG 3 cut(s) 555, 1174, 1707
BstSFI CTRYAG 3 cut(s) 156, 507, 1626
BstUI CGCG 1 cut(s) 1317
BstV1I GCAGC 5 cut(s) 133, 136, 170, 248, 1650
BstV2I GAAGAC 1 cut(s) 1646
BstX2I RGATCY 1 cut(s) 503
BstYI RGATCY 1 cut(s) 503
BsuRI GGCC 8 cut(s) 33, 59, 188, 252, 527, 565, 942, 1715
BtgI CCRYGG 2 cut(s) 384, 1315
BtsCI GGATG 8 cut(s) 290, 472, 696, 970, 979, 1110, 1146, 1193
BtsIMutI CAGTG 1 cut(s) 841
Cac8I GCNNGC 3 cut(s) 144, 1343, 1395
CaiI CAGNNNCTG 1 cut(s) 10
CciI TCATGA 1 cut(s) 1126
CfoI GCGC 1 cut(s) 437
Cfr13I GGNCC 6 cut(s) 32, 187, 563, 941, 1435, 1714
Cfr42I CCGCGG 1 cut(s) 1318
Cfr9I CCCGGG 2 cut(s) 294, 1202
CseI GACGC 2 cut(s) 103, 1550
Csp6I GTAC 2 cut(s) 225, 628
CviAII CATG 7 cut(s) 710, 1127, 1325, 1334, 1370, 1744, 1753
CviQI GTAC 2 cut(s) 225, 628
DdeI CTNAG 5 cut(s) 54, 110, 714, 778, 1232
DpnI GATC 5 cut(s) 505, 894, 1157, 1293, 1461
DpnII GATC 5 cut(s) 503, 892, 1155, 1291, 1459
EaeI YGGCCR 1 cut(s) 525
EciI GGCGGA 1 cut(s) 370
Ecl136II GAGCTC 2 cut(s) 357, 616
Eco24I GRGCYC 3 cut(s) 332, 359, 618
Eco32I GATATC 1 cut(s) 1429
Eco47I GGWCC 1 cut(s) 1435
Eco53kI GAGCTC 2 cut(s) 357, 616
Eco57I CTGAAG 2 cut(s) 806, 842
Eco88I CYCGRG 2 cut(s) 294, 1202
EcoICRI GAGCTC 2 cut(s) 357, 616
EcoO109I RGGNCCY 1 cut(s) 32
EcoRII CCWGG 3 cut(s) 553, 1172, 1705
EcoRV GATATC 1 cut(s) 1429
EcoT22I ATGCAT 1 cut(s) 1470
EcoT38I GRGCYC 3 cut(s) 332, 359, 618
Esp3I CGTCTC 1 cut(s) 121
FaeI CATG 7 cut(s) 713, 1130, 1328, 1337, 1373, 1747, 1756
FalI AAGNNNNNCTT 2 cut(s) 1382, 1414
FaqI GGGAC 2 cut(s) 1196, 1448
FatI CATG 7 cut(s) 709, 1126, 1324, 1333, 1369, 1743, 1752
FauNDI CATATG 1 cut(s) 1464
FbaI TGATCA 1 cut(s) 1459
FblI GTMKAC 1 cut(s) 510
FokI GGATG 8 cut(s) 277, 479, 683, 966, 977, 1117, 1153, 1180
FriOI GRGCYC 3 cut(s) 332, 359, 618
FspBI CTAG 3 cut(s) 654, 1304, 1644
GlaI GCGC 1 cut(s) 436
HaeII RGCGCY 1 cut(s) 438
HaeIII GGCC 8 cut(s) 33, 59, 188, 252, 527, 565, 942, 1715
HapII CCGG 8 cut(s) 168, 295, 321, 338, 528, 536, 1072, 1203
HgaI GACGC 2 cut(s) 103, 1550
HhaI GCGC 1 cut(s) 437
Hin1II CATG 7 cut(s) 713, 1130, 1328, 1337, 1373, 1747, 1756
Hin6I GCGC 1 cut(s) 435
HinP1I GCGC 1 cut(s) 435
HincII GTYRAC 1 cut(s) 849
HindII GTYRAC 1 cut(s) 849
HinfI GANTC 7 cut(s) 317, 487, 550, 693, 755, 1046, 1169
HpaII CCGG 8 cut(s) 168, 295, 321, 338, 528, 536, 1072, 1203
HphI GGTGA 4 cut(s) 111, 452, 1247, 1469
Hpy166II GTNNAC 2 cut(s) 511, 849
Hpy188I TCNGA 9 cut(s) 91, 361, 451, 647, 781, 861, 1233, 1426, 1482
Hpy188III TCNNGA 8 cut(s) 911, 983, 1006, 1127, 1244, 1357, 1502, 1691
Hpy8I GTNNAC 2 cut(s) 511, 849
HpyAV CCTTC 6 cut(s) 104, 754, 818, 1012, 1431, 1477
HpyCH4III ACNGT 3 cut(s) 515, 1439, 1508
HpyF3I CTNAG 5 cut(s) 54, 110, 714, 778, 1232
Hsp92II CATG 7 cut(s) 713, 1130, 1328, 1337, 1373, 1747, 1756
HspAI GCGC 1 cut(s) 435
Ksp22I TGATCA 1 cut(s) 1459
KspI CCGCGG 1 cut(s) 1318
Kzo9I GATC 5 cut(s) 503, 892, 1155, 1291, 1459
LmnI GCTCC 1 cut(s) 245
Lsp1109I GCAGC 5 cut(s) 133, 136, 170, 248, 1650
LweI GCATC 2 cut(s) 576, 955
MaeI CTAG 3 cut(s) 654, 1304, 1644
MaeIII GTNAC 3 cut(s) 1021, 1097, 1253
MalI GATC 5 cut(s) 505, 894, 1157, 1293, 1461
MbiI CCGCTC 1 cut(s) 1121
MboI GATC 5 cut(s) 503, 892, 1155, 1291, 1459
MfeI CAATTG 1 cut(s) 623
MflI RGATCY 1 cut(s) 503
MhlI GDGCHC 3 cut(s) 332, 359, 618
MluCI AATT 4 cut(s) 623, 1009, 1656, 1679
MlyI GAGTC 3 cut(s) 311, 496, 1163
MmeI TCCRAC 3 cut(s) 158, 267, 820
Mph1103I ATGCAT 1 cut(s) 1470
MseI TTAA 6 cut(s) 735, 887, 921, 954, 1031, 1527
MspA1I CMGCKG 2 cut(s) 261, 1317
MspI CCGG 8 cut(s) 168, 295, 321, 338, 528, 536, 1072, 1203
MunI CAATTG 1 cut(s) 623
Mva1269I GAATGC 2 cut(s) 1468, 1476
MvaI CCWGG 3 cut(s) 555, 1174, 1707
MvnI CGCG 1 cut(s) 1317
NciI CCSGG 7 cut(s) 168, 295, 296, 338, 536, 1203, 1204
NdeI CATATG 1 cut(s) 1464
NdeII GATC 5 cut(s) 503, 892, 1155, 1291, 1459
NlaIII CATG 7 cut(s) 713, 1130, 1328, 1337, 1373, 1747, 1756
NlaIV GGNNCC 6 cut(s) 34, 564, 909, 1436, 1488, 1689
NmeAIII GCCGAG 3 cut(s) 164, 591, 637
NmuCI GTSAC 2 cut(s) 1097, 1253
NsiI ATGCAT 1 cut(s) 1470
PagI TCATGA 1 cut(s) 1126
PctI GAATGC 2 cut(s) 1468, 1476
PfeI GAWTC 4 cut(s) 550, 693, 755, 1046
PflMI CCANNNNNTGG 1 cut(s) 1673
PleI GAGTC 3 cut(s) 311, 495, 1163
PpsI GAGTC 3 cut(s) 311, 495, 1163
PshBI ATTAAT 1 cut(s) 921
Psp124BI GAGCTC 2 cut(s) 359, 618
Psp6I CCWGG 3 cut(s) 553, 1172, 1705
PspGI CCWGG 3 cut(s) 553, 1172, 1705
PspN4I GGNNCC 6 cut(s) 34, 564, 909, 1436, 1488, 1689
PspPI GGNCC 6 cut(s) 32, 187, 563, 941, 1435, 1714
PstI CTGCAG 2 cut(s) 160, 1630
PstNI CAGNNNCTG 1 cut(s) 10
PsuI RGATCY 1 cut(s) 503
RsaI GTAC 2 cut(s) 226, 629
RsaNI GTAC 2 cut(s) 225, 628
SacI GAGCTC 2 cut(s) 359, 618
SacII CCGCGG 1 cut(s) 1318
SaqAI TTAA 6 cut(s) 735, 887, 921, 954, 1031, 1527
Sau3AI GATC 5 cut(s) 503, 892, 1155, 1291, 1459
Sau96I GGNCC 6 cut(s) 32, 187, 563, 941, 1435, 1714
ScaI AGTACT 1 cut(s) 226
SchI GAGTC 3 cut(s) 311, 496, 1163
SduI GDGCHC 3 cut(s) 332, 359, 618
SfaNI GCATC 2 cut(s) 576, 955
SfcI CTRYAG 3 cut(s) 156, 507, 1626
Sfr303I CCGCGG 1 cut(s) 1318
SgrBI CCGCGG 1 cut(s) 1318
SinI GGWCC 1 cut(s) 1435
SmaI CCCGGG 2 cut(s) 296, 1204
SmlI CTYRAG 2 cut(s) 617, 881
SmoI CTYRAG 2 cut(s) 617, 881
SrfI GCCCGGGC 1 cut(s) 1204
Sse9I AATT 4 cut(s) 623, 1009, 1656, 1679
SspMI CTAG 3 cut(s) 654, 1304, 1644
SstI GAGCTC 2 cut(s) 359, 618
TaaI ACNGT 3 cut(s) 515, 1439, 1508
TaqI TCGA 7 cut(s) 101, 747, 758, 773, 1117, 1356, 1561
TasI AATT 4 cut(s) 623, 1009, 1656, 1679
TatI WGTACW 2 cut(s) 224, 627
TauI GCSGC 9 cut(s) 62, 174, 177, 180, 183, 252, 261, 282, 1320
TfiI GAWTC 4 cut(s) 550, 693, 755, 1046
Tru1I TTAA 6 cut(s) 735, 887, 921, 954, 1031, 1527
Tru9I TTAA 6 cut(s) 735, 887, 921, 954, 1031, 1527
TscAI CASTG 1 cut(s) 841
TseFI GTSAC 2 cut(s) 1097, 1253
TseI GCWGC 5 cut(s) 146, 149, 158, 261, 1663
Tsp45I GTSAC 2 cut(s) 1097, 1253
TspMI CCCGGG 2 cut(s) 294, 1202
TspRI CASTG 1 cut(s) 841
Van91I CCANNNNNTGG 1 cut(s) 1673
VpaK11BI GGWCC 1 cut(s) 1435
VspI ATTAAT 1 cut(s) 921
XapI RAATTY 1 cut(s) 1656
XmaI CCCGGG 2 cut(s) 294, 1202
XmiI GTMKAC 1 cut(s) 510
XspI CTAG 3 cut(s) 654, 1304, 1644
ZrmI AGTACT 1 cut(s) 226
Zsp2I ATGCAT 1 cut(s) 1470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.