Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0008199

Physical Location & Seq

Genomic Coordinates Reverse (-)

19134936 .. 19136450

Gene Structure 1515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g16000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGCATATCGATCTCTTCTGCATATCTTTGGTGACCAAGTTGCTCGGCCGCATATACTACCACGTTGAAGGCGCAGCGAAGCCTGGGATATTGCCTCCGAATGTGTCAGCTGCCGTAAATGGTGTGGCATTTTGTGGAACCCTGGCAGGCCAGCTCTTCTTTGGCTGGCTTGGTGACAAGATGGGAAGGAAGAAAGTTTATGGAATGACTCTTATGCTTATGGTCATATGTTCTGTTGCTTCAGGTCTCTCATTTGGGCATACCCCAAAATCCGTTATGTCAACGCTTTGTTTCTTCCGGTTCTGGCTAGGGTTTGGTATTGGCGGTGACTACCCTCTCTCTGCCACAATCATGTCTGAGTATGCTAACAAGAAGACTCGAGGCGCTTTCATTGCCGCTGTCTTTGCCATGCAGGGGTTTGGAATTTTAGCTGGTGGAATATTTGCTATCATCTCTGCGTCCGCATTTAAAGCGTTGTTTGATGCTCCAACATATGAGGTCAATGCACTTGCCTCAACCGTTCCACAAGCGGACTATCTGTGGAGGATTATTGTGATGGTAGGAGCAATTCCAGCCGCAATGACTTACTACTGGCGCATGAAGATGCCTGAAACTGCCCGTTACACCGCCCTGGTTGCAAAGAATGCGCAACAGGCTGCATCTGACATGTCAAAGGTTCTGCAGGTTGAAATTGAAGCAGAACCGCAGAAGGCCGAGCCGACTGCTAATACATTTGCTTTGTTCTCCAAGGAGTTTATGCGCCGCCATGGACTTCACTTGCTTGGAACAACAAGCACTTGGTTCTTGCTTGACATTGCATTCTACAGCCAAAATCTGTTCCAAAAGGATATTTTCAGTGCGATCGGATGGATTCCTCCTGCAAAGACTATGAATGCTATTGAAGAAGTCTACAGAATCGCAAGGGCGCAAACTCTTATTGCATTGTGCAGTACCGTCCCGGGCTACTGGTTTACGGTAGCTCTCATTGACAGGATTGGAAGATTTGCAATTCAGTTGATGGGATTCTTCTTCATGACAGTGTTCATGTTTGCACTGGCTATTCCCTATGATCACTGGACTCACAAGGACAACAGAATTGGGTTCGTGGCGATCTACTCATTGACCTTCTTTTTTGCAAACTTTGGTCCTAATGCAACAACATTTGTTGTGCCGGCTGAGATCTTCCCAGCTAGGTTCCGGTCTACTTGTCATGGAATCTCAGCTGCATCCGGGAAGCTTGGCGCCATAGTTGGTGCATTCGGTTTCTTGTACTTGGCTCAGAACCAAGATAAGGCCAAGGCAGATGCAGGGTACCCTGCAGGCATCGGGGTTAAAAACTCGCTCATCGCGTTGGGTGTGGTCAACTTCTTGGGGATATTGTTCACTTTCTTGGTGCCCGAATCGAATGGGAGGTCGTTGGAGGAGATGTCGGGTGAGAACGAAGAAGAAAGCGAGAGCGTGGCAGTGGAGTTGGAGCACTCAGGCTATAACAACAGGACACTTCCAGTTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005315 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008509 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0012505 GO:0015075 GO:0015291 GO:0015318 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0031226 GO:0033993 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0097305 GO:0098656 GO:1901683 GO:1901684 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

505

Amino Acids

55.19

Weight (kDa)

8.57

Isoelectric Point (pI)

35.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	36 - 477	8.8e-47	Sugar (and other) transporter
MFS_1	PF07690	38 - 419	7.5e-22	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38940 AT3G54700 AT3G54700
fragaria_vesca	FvH4_2g21540 FvH4_2g21540
malus_domestica	MD05G1198100.v1.1 MD05G1198300.v1.1 MD10G1184700.v1.1
prunus_persica	Prupe.8G224500_v2.0.a1 Prupe.8G224500_v2.0.a1 Prupe.8G224500_v2.0.a1
pyrus_communis	pycom10g16000
rosa_chinensis	RchiOBHm_Chr6g0288211
rosa_laevigata	RLG00000012429
rosa_multiflora	Rmu_sc0002207.1_g000017
rosa_roxburghii	Rroxscaffold_7G00180390
rosa_rugosa	Rorug06G0194800
rosa_samantha	Rh6AG305400 Rh6BG311400 Rh6CG319300 Rh6DG304500
rosa_wichuraiana	Rw0G014410 Rw6G026440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	648
Acc36I	ACCTGC	1 cut(s)	673
Acc65I	GGTACC	1 cut(s)	1311
AccB1I	GGYRCC	3 cut(s)	1241, 1311, 1393
AccI	GTMKAC	2 cut(s)	909, 1202
AccII	CGCG	1 cut(s)	1349
AciI	CCGC	9 cut(s)	49, 324, 396, 462, 530, 576, 627, 704, 763
AcoI	YGGCCR	1 cut(s)	46
AcsI	RAATTY	1 cut(s)	423
AcuI	CTGAAG	1 cut(s)	225
AcyI	GRCGYC	1 cut(s)	1242
AfaI	GTAC	3 cut(s)	952, 1271, 1313
AfiI	CCNNNNNNNGG	2 cut(s)	414, 1291
AflIII	ACRYGT	1 cut(s)	666
AgsI	TTSAA	4 cut(s)	68, 689, 695, 902
AjnI	CCWGG	3 cut(s)	82, 141, 630
AluBI	AGCT	7 cut(s)	110, 154, 431, 980, 1190, 1223, 1237
AluI	AGCT	7 cut(s)	110, 154, 431, 980, 1190, 1223, 1237
Alw21I	GWGCWC	1 cut(s)	1479
Alw26I	GTCTC	1 cut(s)	251
Ama87I	CYCGRG	2 cut(s)	378, 958
AoxI	GGCC	4 cut(s)	46, 148, 711, 1293
ApeKI	GCWGC	4 cut(s)	74, 110, 656, 1223
ApoI	RAATTY	1 cut(s)	423
ArsI	GACNNNNNNTTYG	2 cut(s)	1397, 1429
Asp718I	GGTACC	1 cut(s)	1311
AspLEI	GCGC	7 cut(s)	74, 386, 597, 649, 762, 928, 1244
AspS9I	GGNCC	1 cut(s)	1145
AsuC2I	CCSGG	3 cut(s)	959, 960, 1231
AsuHPI	GGTGA	4 cut(s)	43, 185, 338, 1445
AvaI	CYCGRG	2 cut(s)	378, 958
AvaII	GGWCC	1 cut(s)	1145
BaeGI	GKGCMC	1 cut(s)	1398
BanI	GGYRCC	3 cut(s)	1241, 1311, 1393
BbsI	GAAGAC	1 cut(s)	380
Bbv12I	GWGCWC	1 cut(s)	1479
BbvI	GCAGC	4 cut(s)	86, 97, 643, 1210
BccI	CCATC	4 cut(s)	175, 550, 861, 1012
BceAI	ACGGC	1 cut(s)	98
BcgI	CGANNNNNNTGC	2 cut(s)	704, 738
BciT130I	CCWGG	3 cut(s)	84, 143, 632
BclI	TGATCA	1 cut(s)	1069
BcnI	CCSGG	3 cut(s)	959, 960, 1231
BcoDI	GTCTC	1 cut(s)	251
BfaI	CTAG	2 cut(s)	308, 1191
BfmI	CTRYAG	4 cut(s)	680, 823, 910, 1317
BfoI	RGCGCY	2 cut(s)	387, 1245
BfuAI	ACCTGC	1 cut(s)	673
BglII	AGATCT	1 cut(s)	1179
BisI	GCNGC	8 cut(s)	49, 75, 111, 396, 576, 657, 763, 1224
BlsI	GCNGC	8 cut(s)	50, 76, 112, 397, 577, 658, 764, 1225
Bme1390I	CCNGG	6 cut(s)	84, 143, 632, 959, 960, 1231
Bme18I	GGWCC	1 cut(s)	1145
BmeT110I	CYCGRG	2 cut(s)	378, 958
BmgT120I	GGNCC	1 cut(s)	1145
BmiI	GGNNCC	5 cut(s)	139, 1196, 1243, 1313, 1395
BmrFI	CCNGG	6 cut(s)	84, 143, 632, 959, 960, 1231
BmsI	GCATC	6 cut(s)	472, 594, 668, 1235, 1294, 1332
BpiI	GAAGAC	1 cut(s)	380
BpuMI	CCSGG	3 cut(s)	959, 960, 1231
Bsa29I	ATCGAT	1 cut(s)	9
BsaHI	GRCGYC	1 cut(s)	1242
BsaI	GGTCTC	1 cut(s)	251
BsaJI	CCNNGG	7 cut(s)	83, 141, 630, 747, 766, 958, 1296
BsaWI	WCCGGW	2 cut(s)	297, 1197
BsaXI	ACNNNNNCTCC	2 cut(s)	1412, 1442
Bsc4I	CCNNNNNNNGG	2 cut(s)	414, 1291
Bse118I	RCCGGY	1 cut(s)	1171
Bse1I	ACTGG	5 cut(s)	596, 971, 1059, 1079, 1505
Bse3DI	GCAATG	3 cut(s)	390, 585, 813
BseBI	CCWGG	3 cut(s)	84, 143, 632
BseCI	ATCGAT	1 cut(s)	9
BseDI	CCNNGG	7 cut(s)	83, 141, 630, 747, 766, 958, 1296
BseGI	GGATG	2 cut(s)	872, 1226
BseLI	CCNNNNNNNGG	2 cut(s)	414, 1291
BseMI	GCAATG	3 cut(s)	390, 585, 813
BseMII	CTCAG	5 cut(s)	348, 1167, 1233, 1292, 1494
BseNI	ACTGG	5 cut(s)	596, 971, 1059, 1079, 1505
BseRI	GAGGAG	1 cut(s)	1436
BseSI	GKGCMC	1 cut(s)	1398
BseX3I	CGGCCG	1 cut(s)	46
BseXI	GCAGC	4 cut(s)	86, 97, 643, 1210
BseYI	CCCAGC	1 cut(s)	1186
BsgI	GTGCAG	1 cut(s)	967
Bsh1236I	CGCG	1 cut(s)	1349
Bsh1285I	CGRYCG	2 cut(s)	49, 864
BshFI	GGCC	4 cut(s)	48, 150, 713, 1295
BshNI	GGYRCC	3 cut(s)	1241, 1311, 1393
BshVI	ATCGAT	1 cut(s)	9
BsiEI	CGRYCG	2 cut(s)	49, 864
BsiHKAI	GWGCWC	1 cut(s)	1479
BsiHKCI	CYCGRG	2 cut(s)	378, 958
BsiSI	CCGG	5 cut(s)	298, 959, 1172, 1198, 1230
BslFI	GGGAC	1 cut(s)	941
BslI	CCNNNNNNNGG	2 cut(s)	414, 1291
BsmAI	GTCTC	1 cut(s)	251
BsmFI	GGGAC	1 cut(s)	941
BsmI	GAATGC	4 cut(s)	649, 818, 898, 1256
BsnI	GGCC	4 cut(s)	48, 150, 713, 1295
Bso31I	GGTCTC	1 cut(s)	251
BsoBI	CYCGRG	2 cut(s)	378, 958
Bsp1286I	GDGCHC	2 cut(s)	1398, 1479
Bsp143I	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
Bsp19I	CCATGG	1 cut(s)	766
BspACI	CCGC	9 cut(s)	49, 324, 396, 462, 530, 576, 627, 704, 763
BspANI	GGCC	4 cut(s)	48, 150, 713, 1295
BspCNI	CTCAG	5 cut(s)	349, 1168, 1232, 1291, 1493
BspDI	ATCGAT	1 cut(s)	9
BspFNI	CGCG	1 cut(s)	1349
BspHI	TCATGA	1 cut(s)	1032
BspLI	GGNNCC	5 cut(s)	139, 1196, 1243, 1313, 1395
BspMAI	CTGCAG	2 cut(s)	684, 1321
BspMI	ACCTGC	1 cut(s)	673
BspQI	GCTCTTC	1 cut(s)	161
BspT107I	GGYRCC	3 cut(s)	1241, 1311, 1393
BspTNI	GGTCTC	1 cut(s)	251
BsrDI	GCAATG	3 cut(s)	390, 585, 813
BsrFI	RCCGGY	1 cut(s)	1171
BsrI	ACTGG	5 cut(s)	596, 971, 1059, 1079, 1505
BssAI	RCCGGY	1 cut(s)	1171
BssECI	CCNNGG	7 cut(s)	83, 141, 630, 747, 766, 958, 1296
BssMI	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
BssNI	GRCGYC	1 cut(s)	1242
BssT1I	CCWWGG	3 cut(s)	747, 766, 1296
Bst2UI	CCWGG	3 cut(s)	84, 143, 632
Bst4CI	ACNGT	4 cut(s)	520, 955, 976, 1039
Bst6I	CTCTTC	2 cut(s)	20, 161
BstACI	GRCGYC	1 cut(s)	1242
BstAPI	GCANNNNNTGC	1 cut(s)	644
BstC8I	GCNNGC	5 cut(s)	148, 152, 167, 1173, 1321
BstDEI	CTNAG	5 cut(s)	357, 1176, 1219, 1278, 1480
BstDSI	CCRYGG	1 cut(s)	766
BstEII	GGTNACC	1 cut(s)	31
BstF5I	GGATG	2 cut(s)	872, 1226
BstFNI	CGCG	1 cut(s)	1349
BstH2I	RGCGCY	2 cut(s)	387, 1245
BstHHI	GCGC	7 cut(s)	74, 386, 597, 649, 762, 928, 1244
BstKTI	GATC	5 cut(s)	13, 864, 1072, 1113, 1182
BstMAI	GTCTC	1 cut(s)	251
BstMBI	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
BstMCI	CGRYCG	2 cut(s)	49, 864
BstMWI	GCNNNNNNNGC	7 cut(s)	392, 404, 470, 572, 635, 644, 653
BstNI	CCWGG	3 cut(s)	84, 143, 632
BstNSI	RCATGY	1 cut(s)	670
BstPI	GGTNACC	1 cut(s)	31
BstSCI	CCNGG	6 cut(s)	82, 141, 630, 957, 958, 1229
BstSFI	CTRYAG	4 cut(s)	680, 823, 910, 1317
BstSLI	GKGCMC	1 cut(s)	1398
BstUI	CGCG	1 cut(s)	1349
BstV1I	GCAGC	4 cut(s)	86, 97, 643, 1210
BstV2I	GAAGAC	1 cut(s)	380
BstX2I	RGATCY	1 cut(s)	1179
BstYI	RGATCY	1 cut(s)	1179
BstZI	CGGCCG	1 cut(s)	46
Bsu15I	ATCGAT	1 cut(s)	9
BsuRI	GGCC	4 cut(s)	48, 150, 713, 1295
BsuTUI	ATCGAT	1 cut(s)	9
BtgI	CCRYGG	1 cut(s)	766
BtgZI	GCGATG	1 cut(s)	1330
BtsCI	GGATG	2 cut(s)	872, 1226
BtsI	GCAGTG	1 cut(s)	1470
BtsIMutI	CAGTG	5 cut(s)	862, 1044, 1052, 1072, 1470
BveI	ACCTGC	1 cut(s)	673
Cac8I	GCNNGC	5 cut(s)	148, 152, 167, 1173, 1321
CciI	TCATGA	1 cut(s)	1032
CfoI	GCGC	7 cut(s)	74, 386, 597, 649, 762, 928, 1244
Cfr10I	RCCGGY	1 cut(s)	1171
Cfr13I	GGNCC	1 cut(s)	1145
Cfr9I	CCCGGG	1 cut(s)	958
ClaI	ATCGAT	1 cut(s)	9
CseI	GACGC	1 cut(s)	447
Csp6I	GTAC	3 cut(s)	951, 1270, 1312
CviAII	CATG	8 cut(s)	352, 409, 598, 667, 767, 1033, 1045, 1211
CviQI	GTAC	3 cut(s)	951, 1270, 1312
DdeI	CTNAG	5 cut(s)	357, 1176, 1219, 1278, 1480
DinI	GGCGCC	1 cut(s)	1243
DpnI	GATC	5 cut(s)	12, 863, 1071, 1112, 1181
DpnII	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
DraI	TTTAAA	1 cut(s)	469
EaeI	YGGCCR	1 cut(s)	46
EagI	CGGCCG	1 cut(s)	46
Eam1104I	CTCTTC	2 cut(s)	20, 161
EarI	CTCTTC	2 cut(s)	20, 161
EclXI	CGGCCG	1 cut(s)	46
Eco130I	CCWWGG	3 cut(s)	747, 766, 1296
Eco31I	GGTCTC	1 cut(s)	251
Eco47I	GGWCC	1 cut(s)	1145
Eco52I	CGGCCG	1 cut(s)	46
Eco57I	CTGAAG	1 cut(s)	225
Eco88I	CYCGRG	2 cut(s)	378, 958
Eco91I	GGTNACC	1 cut(s)	31
EcoO65I	GGTNACC	1 cut(s)	31
EcoRII	CCWGG	3 cut(s)	82, 141, 630
EcoT14I	CCWWGG	3 cut(s)	747, 766, 1296
EcoT22I	ATGCAT	1 cut(s)	6
EgeI	GGCGCC	1 cut(s)	1243
EheI	GGCGCC	1 cut(s)	1243
ErhI	CCWWGG	3 cut(s)	747, 766, 1296
FaeI	CATG	8 cut(s)	355, 412, 601, 670, 770, 1036, 1048, 1214
FaqI	GGGAC	1 cut(s)	941
FatI	CATG	8 cut(s)	351, 408, 597, 666, 766, 1032, 1044, 1210
FauNDI	CATATG	2 cut(s)	227, 493
FbaI	TGATCA	1 cut(s)	1069
FblI	GTMKAC	2 cut(s)	909, 1202
Fnu4HI	GCNGC	8 cut(s)	49, 75, 111, 396, 576, 657, 763, 1224
FokI	GGATG	2 cut(s)	879, 1213
Fsp4HI	GCNGC	8 cut(s)	49, 75, 111, 396, 576, 657, 763, 1224
FspBI	CTAG	2 cut(s)	308, 1191
FspI	TGCGCA	1 cut(s)	648
GlaI	GCGC	7 cut(s)	73, 385, 596, 648, 761, 927, 1243
GluI	GCNGC	8 cut(s)	49, 75, 111, 396, 576, 657, 763, 1224
GsaI	CCCAGC	1 cut(s)	1190
HaeII	RGCGCY	2 cut(s)	387, 1245
HaeIII	GGCC	4 cut(s)	48, 150, 713, 1295
HapII	CCGG	5 cut(s)	298, 959, 1172, 1198, 1230
HgaI	GACGC	1 cut(s)	447
HhaI	GCGC	7 cut(s)	74, 386, 597, 649, 762, 928, 1244
Hin1I	GRCGYC	1 cut(s)	1242
Hin1II	CATG	8 cut(s)	355, 412, 601, 670, 770, 1036, 1048, 1214
Hin6I	GCGC	7 cut(s)	72, 384, 595, 647, 760, 926, 1242
HinP1I	GCGC	7 cut(s)	72, 384, 595, 647, 760, 926, 1242
HincII	GTYRAC	2 cut(s)	282, 1363
HindII	GTYRAC	2 cut(s)	282, 1363
HindIII	AAGCTT	1 cut(s)	1235
HinfI	GANTC	8 cut(s)	208, 376, 871, 915, 1023, 1078, 1215, 1400
HpaII	CCGG	5 cut(s)	298, 959, 1172, 1198, 1230
HphI	GGTGA	4 cut(s)	43, 185, 338, 1445
Hpy166II	GTNNAC	6 cut(s)	282, 910, 972, 1203, 1363, 1383
Hpy188I	TCNGA	5 cut(s)	99, 358, 664, 866, 1281
Hpy188III	TCNNGA	1 cut(s)	1033
Hpy8I	GTNNAC	6 cut(s)	282, 910, 972, 1203, 1363, 1383
HpyAV	CCTTC	4 cut(s)	62, 180, 703, 1135
HpyCH4III	ACNGT	4 cut(s)	520, 955, 976, 1039
HpyCH4IV	ACGT	1 cut(s)	63
HpyF10VI	GCNNNNNNNGC	7 cut(s)	392, 404, 470, 572, 635, 644, 653
HpyF3I	CTNAG	5 cut(s)	357, 1176, 1219, 1278, 1480
HpySE526I	ACGT	1 cut(s)	63
Hsp92I	GRCGYC	1 cut(s)	1242
Hsp92II	CATG	8 cut(s)	355, 412, 601, 670, 770, 1036, 1048, 1214
HspAI	GCGC	7 cut(s)	72, 384, 595, 647, 760, 926, 1242
KasI	GGCGCC	1 cut(s)	1241
KpnI	GGTACC	1 cut(s)	1315
KroI	GCCGGC	1 cut(s)	1171
KroNI	GCCGGC	1 cut(s)	1173
Ksp22I	TGATCA	1 cut(s)	1069
Kzo9I	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
LguI	GCTCTTC	1 cut(s)	161
LmnI	GCTCC	3 cut(s)	490, 563, 1474
Lsp1109I	GCAGC	4 cut(s)	86, 97, 643, 1210
LweI	GCATC	6 cut(s)	472, 594, 668, 1235, 1294, 1332
MaeI	CTAG	2 cut(s)	308, 1191
MaeII	ACGT	1 cut(s)	63
MaeIII	GTNAC	4 cut(s)	31, 173, 326, 620
MalI	GATC	5 cut(s)	12, 863, 1071, 1112, 1181
MboI	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
MflI	RGATCY	1 cut(s)	1179
MhlI	GDGCHC	2 cut(s)	1398, 1479
MluCI	AATT	5 cut(s)	423, 567, 690, 1008, 1095
Mly113I	GGCGCC	1 cut(s)	1242
MlyI	GAGTC	3 cut(s)	202, 370, 1072
MmeI	TCCRAC	3 cut(s)	512, 1398, 1452
MnlI	CCTC	9 cut(s)	105, 345, 374, 490, 523, 537, 885, 1404, 1414
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	1171
MseI	TTAA	2 cut(s)	468, 1332
MslI	CAYNNNNRTG	3 cut(s)	350, 602, 1037
MspA1I	CMGCKG	3 cut(s)	110, 398, 1223
MspI	CCGG	5 cut(s)	298, 959, 1172, 1198, 1230
MspR9I	CCNGG	6 cut(s)	84, 143, 632, 959, 960, 1231
Mva1269I	GAATGC	4 cut(s)	649, 818, 898, 1256
MvaI	CCWGG	3 cut(s)	84, 143, 632
MvnI	CGCG	1 cut(s)	1349
MwoI	GCNNNNNNNGC	7 cut(s)	392, 404, 470, 572, 635, 644, 653
NaeI	GCCGGC	1 cut(s)	1173
NarI	GGCGCC	1 cut(s)	1242
NciI	CCSGG	3 cut(s)	959, 960, 1231
NcoI	CCATGG	1 cut(s)	766
NdeI	CATATG	2 cut(s)	227, 493
NdeII	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
NgoMIV	GCCGGC	1 cut(s)	1171
NlaIII	CATG	8 cut(s)	355, 412, 601, 670, 770, 1036, 1048, 1214
NlaIV	GGNNCC	5 cut(s)	139, 1196, 1243, 1313, 1395
NmeAIII	GCCGAG	2 cut(s)	24, 739
NmuCI	GTSAC	3 cut(s)	31, 173, 326
NsbI	TGCGCA	1 cut(s)	648
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	670
PaeR7I	CTCGAG	1 cut(s)	378
PagI	TCATGA	1 cut(s)	1032
PciI	ACATGT	1 cut(s)	666
PciSI	GCTCTTC	1 cut(s)	161
PcsI	WCGNNNNNNNCGW	1 cut(s)	1346
PctI	GAATGC	4 cut(s)	649, 818, 898, 1256
PdiI	GCCGGC	1 cut(s)	1173
PfeI	GAWTC	5 cut(s)	871, 915, 1023, 1215, 1400
PfoI	TCCNGGA	1 cut(s)	1229
PkrI	GCNGC	8 cut(s)	50, 76, 112, 397, 577, 658, 764, 1225
Ple19I	CGATCG	1 cut(s)	864
PleI	GAGTC	3 cut(s)	202, 370, 1072
PluTI	GGCGCC	1 cut(s)	1245
PpsI	GAGTC	3 cut(s)	202, 370, 1072
PscI	ACATGT	1 cut(s)	666
Psp6I	CCWGG	3 cut(s)	82, 141, 630
PspEI	GGTNACC	1 cut(s)	31
PspFI	CCCAGC	1 cut(s)	1186
PspGI	CCWGG	3 cut(s)	82, 141, 630
PspN4I	GGNNCC	5 cut(s)	139, 1196, 1243, 1313, 1395
PspPI	GGNCC	1 cut(s)	1145
PspXI	VCTCGAGB	1 cut(s)	378
PstI	CTGCAG	2 cut(s)	684, 1321
PsuI	RGATCY	1 cut(s)	1179
PvuI	CGATCG	1 cut(s)	864
PvuII	CAGCTG	2 cut(s)	110, 1223
RsaI	GTAC	3 cut(s)	952, 1271, 1313
RsaNI	GTAC	3 cut(s)	951, 1270, 1312
RseI	CAYNNNNRTG	3 cut(s)	350, 602, 1037
SapI	GCTCTTC	1 cut(s)	161
SaqAI	TTAA	2 cut(s)	468, 1332
SatI	GCNGC	8 cut(s)	49, 75, 111, 396, 576, 657, 763, 1224
Sau3AI	GATC	5 cut(s)	10, 861, 1069, 1110, 1179
Sau96I	GGNCC	1 cut(s)	1145
SbfI	CCTGCAGG	1 cut(s)	1321
SchI	GAGTC	3 cut(s)	202, 370, 1072
ScrFI	CCNGG	6 cut(s)	84, 143, 632, 959, 960, 1231
SdaI	CCTGCAGG	1 cut(s)	1321
SduI	GDGCHC	2 cut(s)	1398, 1479
SfaNI	GCATC	6 cut(s)	472, 594, 668, 1235, 1294, 1332
SfcI	CTRYAG	4 cut(s)	680, 823, 910, 1317
SfoI	GGCGCC	1 cut(s)	1243
Sfr274I	CTCGAG	1 cut(s)	378
SinI	GGWCC	1 cut(s)	1145
SlaI	CTCGAG	1 cut(s)	378
SmaI	CCCGGG	1 cut(s)	960
SmiMI	CAYNNNNRTG	3 cut(s)	350, 602, 1037
SmlI	CTYRAG	1 cut(s)	378
SmoI	CTYRAG	1 cut(s)	378
Sse8387I	CCTGCAGG	1 cut(s)	1321
Sse9I	AATT	5 cut(s)	423, 567, 690, 1008, 1095
SsiI	CCGC	9 cut(s)	49, 324, 396, 462, 530, 576, 627, 704, 763
SspDI	GGCGCC	1 cut(s)	1241
SspI	AATATT	1 cut(s)	441
SspMI	CTAG	2 cut(s)	308, 1191
StyD4I	CCNGG	6 cut(s)	82, 141, 630, 957, 958, 1229
StyI	CCWWGG	3 cut(s)	747, 766, 1296
TaaI	ACNGT	4 cut(s)	520, 955, 976, 1039
TaiI	ACGT	1 cut(s)	66
TaqI	TCGA	3 cut(s)	9, 379, 1403
TasI	AATT	5 cut(s)	423, 567, 690, 1008, 1095
TatI	WGTACW	1 cut(s)	1269
TauI	GCSGC	4 cut(s)	51, 398, 578, 765
TfiI	GAWTC	5 cut(s)	871, 915, 1023, 1215, 1400
Tru1I	TTAA	2 cut(s)	468, 1332
Tru9I	TTAA	2 cut(s)	468, 1332
TscAI	CASTG	5 cut(s)	862, 1044, 1059, 1079, 1470
TseFI	GTSAC	3 cut(s)	31, 173, 326
TseI	GCWGC	4 cut(s)	74, 110, 656, 1223
Tsp45I	GTSAC	3 cut(s)	31, 173, 326
TspDTI	ATGAA	5 cut(s)	379, 614, 905, 1021, 1033
TspGWI	ACGGA	1 cut(s)	262
TspMI	CCCGGG	1 cut(s)	958
TspRI	CASTG	5 cut(s)	862, 1044, 1059, 1079, 1470
VpaK11BI	GGWCC	1 cut(s)	1145
XapI	RAATTY	1 cut(s)	423
XceI	RCATGY	1 cut(s)	670
XcmI	CCANNNNNNNNNTGG	1 cut(s)	158
XhoI	CTCGAG	1 cut(s)	378
XmaI	CCCGGG	1 cut(s)	958
XmiI	GTMKAC	2 cut(s)	909, 1202
XspI	CTAG	2 cut(s)	308, 1191
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.