RLG00000012429

Inorganic phosphate transporter

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
18724193 .. 18725815
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012429

Sequence Viewer

Length: 1623 bp
ATGGCTAGAGAACAATTACAGGTGCTTAACGCACTTGATATTGCGAAAACACAATGGTACCATTTCACTGCAATTATCATTGCTGGAATGGGATTCTTCACAGATGCATATGATCTCTTCTGCATATCCCTTGTCACCAAATTGCTTGGTCGCATATACTACCATGTTGAAGGTGCTGAAAAACCTGGGACATTGCCTCCCAATGTCTCCGCTGCGGTGAATGGTGTAGCCTTCTGTGGAACATTAACTGGCCAACTCTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGGAAGAAAGTGTATGGCATGACTCTTATGCTCATGGTCATATGTTCTATTGCTTCAGGTCTTTCGTTTGGGCACGACCCCAAGACTGTGATGTCTACACTTTGCTTCTTTCGGTTCTGGCTTGGTTTCGGTATTGGTGGTGACTACCCTCTTTCGGCCACCATCATGTCTGAGTATGCTAACAAGAAGACTCGCGGAGCCTTCATTGCTGCGGTGTTTGCCATGCAAGGGTTTGGAATTTTGGCTGGTGGGATATTTGCAATCATTTGTTCAGCTGCGTTTAATGCCAAGTTTGATGCTCCAGCATATGAGGTCAGTGGAGCTGCCTCAACTGTTCCACAAGCAGACTATCTCTGGCGAATTATACTGATGGTAGGCGCAATCCCGGCAGCAATGACTTACTACTGGCGAATGAAGATGCCTGAGACTGCTCGTTACACTGCCCTTGTTGCCAAGAATGCAAAGCAGGCTGCATCAGACATGTCAAAGGTTCTGCAGGTTGAGATTGAAGCTGAAACAGCTAAGGTTGAGGATCAGCAGTCGACTAATGCCTTCGCTTTGTTCTCTAAGGAGTTTATGCGCCGCCATGGACTTCACTTGCTTGGAACAACAAGCACATGGTTCTTGCTTGACATTGCATACTACAGCTCAAATCTGTTCCAAAAGGATATCTTCAGCGCGATTGGATGGATTCCCGCTGCTAAGACTATGAATGCTATCGAGGAGGTTTACAAAATTGCACGAGCACAGACGCTTATTGCTATGTGCAGTACTGTCCCAGGCTACTGGTTTACAGTTGCTTTCATCGACAGGATTGGAAGGTTTACGATTCAATTGATGGGATTCTTCTTCATGACAGTATTTATGTTTGCACTGGCCATTCCCTATGACCACTGGACTCACAAGGATAACCGGATTGGATTTGTGGTGATATACTCATTGACATTCTTCTTCGCCAACTTTGGTCCCAATGCCACCACATTTGTTGTGCCGGCTGAGATTTTCCCTGCTAGGTTCCGGTCTACATGTCACGGAATCTCAGCAGCAGCAGGGAAGCTCGGTGCTATAATTGGTGCATTTGGATTCTTGTATTTGGCTCAGAACAAGGACAAGACAAAGGCTGATGCAGGGTACCCTGCTGGCATTGGAGTGAAAAACTCACTCATTGTGTTGGGTGTTGTTAACTTTTTCGGGATATTGTTCACTTTCTTGGTGCCTGAATCGAATGGCAAGTCATTGGAGGAGATGTCAGGCGAGAATGAAGAGGAACCTGAATCTGCATTGGAGTTGGAGCAGCAATCAGGTTATGGCAACAACAGGACAGTTCCAGTTTAG

Protein Analysis

541

Amino Acids

59.39

Weight (kDa)

8.03

Isoelectric Point (pI)

33.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 26 - 513 4.7e-52 Sugar (and other) transporter
MFS_1 PF07690 66 - 455 6.5e-23 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 379
Acc36I ACCTGC 1 cut(s) 775
Acc65I GGTACC 2 cut(s) 57, 1419
AccB1I GGYRCC 3 cut(s) 57, 1419, 1501
AccI GTMKAC 3 cut(s) 383, 830, 1310
AccII CGCG 2 cut(s) 483, 968
AciI CCGC 6 cut(s) 210, 215, 483, 500, 871, 984
AclWI GGATC 1 cut(s) 828
AcoI YGGCCR 3 cut(s) 250, 444, 1164
AcsI RAATTY 1 cut(s) 525
AcuI CTGAAG 2 cut(s) 327, 946
AfaI GTAC 3 cut(s) 59, 1060, 1421
AfiI CCNNNNNNNGG 2 cut(s) 442, 516
AflIII ACRYGT 2 cut(s) 768, 1313
AgsI TTSAA 3 cut(s) 170, 797, 1121
AjnI CCWGG 2 cut(s) 184, 1066
AluBI AGCT 6 cut(s) 563, 611, 800, 809, 936, 1345
AluI AGCT 6 cut(s) 563, 611, 800, 809, 936, 1345
Alw21I GWGCWC 1 cut(s) 1036
Alw26I GTCTC 2 cut(s) 211, 707
AlwI GGATC 1 cut(s) 828
AoxI GGCC 3 cut(s) 250, 444, 1164
ApoI RAATTY 1 cut(s) 525
ArsI GACNNNNNNTTYG 2 cut(s) 1505, 1537
Asp718I GGTACC 2 cut(s) 57, 1419
AspLEI GCGC 3 cut(s) 668, 870, 968
AspS9I GGNCC 1 cut(s) 1253
AsuC2I CCSGG 1 cut(s) 674
AsuHPI GGTGA 5 cut(s) 127, 229, 287, 440, 1228
AvaII GGWCC 1 cut(s) 1253
BaeGI GKGCMC 1 cut(s) 363
BaeI ACNNNNGTAYC 2 cut(s) 41, 74
BalI TGGCCA 2 cut(s) 252, 1166
BanI GGYRCC 3 cut(s) 57, 1419, 1501
BauI CACGAG 1 cut(s) 1029
BbsI GAAGAC 1 cut(s) 482
Bbv12I GWGCWC 1 cut(s) 1036
BccI CCATC 4 cut(s) 458, 652, 969, 1120
BciT130I CCWGG 2 cut(s) 186, 1068
BcnI CCSGG 1 cut(s) 674
BcoDI GTCTC 2 cut(s) 211, 707
BfaI CTAG 2 cut(s) 6, 1299
BfmI CTRYAG 2 cut(s) 782, 931
BfuAI ACCTGC 1 cut(s) 775
BmcAI AGTACT 1 cut(s) 1060
Bme1390I CCNGG 3 cut(s) 186, 674, 1068
Bme18I GGWCC 1 cut(s) 1253
BmgT120I GGNCC 1 cut(s) 1253
BmiI GGNNCC 7 cut(s) 59, 487, 1255, 1304, 1421, 1503, 1557
BmrFI CCNGG 3 cut(s) 186, 674, 1068
BmsI GCATC 5 cut(s) 94, 574, 696, 770, 1402
BpiI GAAGAC 1 cut(s) 482
BpmI CTGGAG 1 cut(s) 573
Bpu10I CCTNAGC 1 cut(s) 810
BpuMI CCSGG 1 cut(s) 674
BsaJI CCNNGG 3 cut(s) 185, 874, 1066
BsaWI WCCGGW 2 cut(s) 1200, 1305
BsaXI ACNNNNNCTCC 4 cut(s) 181, 211, 1520, 1550
Bsc4I CCNNNNNNNGG 2 cut(s) 442, 516
Bse118I RCCGGY 1 cut(s) 1279
Bse1I ACTGG 6 cut(s) 253, 698, 1079, 1167, 1187, 1616
Bse3DI GCAATG 5 cut(s) 78, 191, 492, 687, 921
BseBI CCWGG 2 cut(s) 186, 1068
BseDI CCNNGG 3 cut(s) 185, 874, 1066
BseGI GGATG 1 cut(s) 980
BseLI CCNNNNNNNGG 2 cut(s) 442, 516
BseMI GCAATG 5 cut(s) 78, 191, 492, 687, 921
BseMII CTCAG 5 cut(s) 450, 702, 1275, 1341, 1400
BseNI ACTGG 6 cut(s) 253, 698, 1079, 1167, 1187, 1616
BseRI GAGGAG 2 cut(s) 1025, 1544
BseSI GKGCMC 1 cut(s) 363
BsgI GTGCAG 1 cut(s) 1075
Bsh1236I CGCG 2 cut(s) 483, 968
BshFI GGCC 3 cut(s) 252, 446, 1166
BshNI GGYRCC 3 cut(s) 57, 1419, 1501
BsiHKAI GWGCWC 1 cut(s) 1036
BsiSI CCGG 4 cut(s) 674, 1201, 1280, 1306
BslFI GGGAC 3 cut(s) 202, 1049, 1239
BslI CCNNNNNNNGG 2 cut(s) 442, 516
BsmAI GTCTC 2 cut(s) 211, 707
BsmFI GGGAC 3 cut(s) 202, 1049, 1239
BsmI GAATGC 2 cut(s) 751, 1006
BsnI GGCC 3 cut(s) 252, 446, 1166
Bsp1286I GDGCHC 2 cut(s) 363, 1036
Bsp143I GATC 2 cut(s) 112, 820
Bsp19I CCATGG 1 cut(s) 874
BspACI CCGC 6 cut(s) 210, 215, 483, 500, 871, 984
BspANI GGCC 3 cut(s) 252, 446, 1166
BspCNI CTCAG 5 cut(s) 451, 703, 1276, 1340, 1399
BspFNI CGCG 2 cut(s) 483, 968
BspHI TCATGA 1 cut(s) 1140
BspLI GGNNCC 7 cut(s) 59, 487, 1255, 1304, 1421, 1503, 1557
BspMAI CTGCAG 1 cut(s) 786
BspMI ACCTGC 1 cut(s) 775
BspPI GGATC 1 cut(s) 828
BspT107I GGYRCC 3 cut(s) 57, 1419, 1501
BsrDI GCAATG 5 cut(s) 78, 191, 492, 687, 921
BsrFI RCCGGY 1 cut(s) 1279
BsrI ACTGG 6 cut(s) 253, 698, 1079, 1167, 1187, 1616
BssAI RCCGGY 1 cut(s) 1279
BssECI CCNNGG 3 cut(s) 185, 874, 1066
BssMI GATC 2 cut(s) 112, 820
BssSI CACGAG 1 cut(s) 1029
BssT1I CCWWGG 1 cut(s) 874
Bst2BI CACGAG 1 cut(s) 1029
Bst2UI CCWGG 2 cut(s) 186, 1068
Bst4CI ACNGT 6 cut(s) 376, 622, 1063, 1084, 1147, 1612
Bst6I CTCTTC 3 cut(s) 122, 263, 1545
BstC8I GCNNGC 4 cut(s) 269, 756, 1281, 1429
BstDEI CTNAG 8 cut(s) 459, 711, 810, 855, 990, 1284, 1327, 1386
BstDSI CCRYGG 1 cut(s) 874
BstF5I GGATG 1 cut(s) 980
BstFNI CGCG 2 cut(s) 483, 968
BstHHI GCGC 3 cut(s) 668, 870, 968
BstKTI GATC 2 cut(s) 115, 823
BstMAI GTCTC 2 cut(s) 211, 707
BstMBI GATC 2 cut(s) 112, 820
BstMWI GCNNNNNNNGC 8 cut(s) 494, 506, 572, 674, 737, 746, 755, 806
BstNI CCWGG 2 cut(s) 186, 1068
BstNSI RCATGY 2 cut(s) 772, 1317
BstSCI CCNGG 3 cut(s) 184, 672, 1066
BstSFI CTRYAG 2 cut(s) 782, 931
BstSLI GKGCMC 1 cut(s) 363
BstUI CGCG 2 cut(s) 483, 968
BstV2I GAAGAC 1 cut(s) 482
BstXI CCANNNNNNTGG 1 cut(s) 1074
BsuRI GGCC 3 cut(s) 252, 446, 1166
BtgI CCRYGG 1 cut(s) 874
BtsCI GGATG 1 cut(s) 980
BtsI GCAGTG 2 cut(s) 66, 726
BtsIMutI CAGTG 5 cut(s) 66, 610, 726, 1160, 1180
BveI ACCTGC 1 cut(s) 775
Cac8I GCNNGC 4 cut(s) 269, 756, 1281, 1429
CciI TCATGA 1 cut(s) 1140
CfoI GCGC 3 cut(s) 668, 870, 968
Cfr10I RCCGGY 1 cut(s) 1279
Cfr13I GGNCC 1 cut(s) 1253
CseI GACGC 1 cut(s) 1048
Csp6I GTAC 3 cut(s) 58, 1059, 1420
CspCI CAANNNNNGTGG 4 cut(s) 1252, 1255, 1287, 1290
CviQI GTAC 3 cut(s) 58, 1059, 1420
DdeI CTNAG 8 cut(s) 459, 711, 810, 855, 990, 1284, 1327, 1386
DpnI GATC 2 cut(s) 114, 822
DpnII GATC 2 cut(s) 112, 820
DrdI GACNNNNNNGTC 1 cut(s) 379
DseDI GACNNNNNNGTC 1 cut(s) 379
EaeI YGGCCR 3 cut(s) 250, 444, 1164
Eam1104I CTCTTC 3 cut(s) 122, 263, 1545
EarI CTCTTC 3 cut(s) 122, 263, 1545
Eco130I CCWWGG 1 cut(s) 874
Eco32I GATATC 1 cut(s) 958
Eco47I GGWCC 1 cut(s) 1253
Eco57I CTGAAG 2 cut(s) 327, 946
EcoRII CCWGG 2 cut(s) 184, 1066
EcoRV GATATC 1 cut(s) 958
EcoT14I CCWWGG 1 cut(s) 874
EcoT22I ATGCAT 1 cut(s) 109
ErhI CCWWGG 1 cut(s) 874
FalI AAGNNNNNCTT 2 cut(s) 944, 976
FaqI GGGAC 3 cut(s) 202, 1049, 1239
FauI CCCGC 1 cut(s) 991
FauNDI CATATG 3 cut(s) 109, 329, 595
FblI GTMKAC 3 cut(s) 383, 830, 1310
FokI GGATG 1 cut(s) 987
FspBI CTAG 2 cut(s) 6, 1299
GlaI GCGC 3 cut(s) 667, 869, 967
GsuI CTGGAG 1 cut(s) 573
HaeIII GGCC 3 cut(s) 252, 446, 1166
HapII CCGG 4 cut(s) 674, 1201, 1280, 1306
HgaI GACGC 1 cut(s) 1048
HhaI GCGC 3 cut(s) 668, 870, 968
Hin6I GCGC 3 cut(s) 666, 868, 966
HinP1I GCGC 3 cut(s) 666, 868, 966
HincII GTYRAC 2 cut(s) 831, 1471
HindII GTYRAC 2 cut(s) 831, 1471
HpaI GTTAAC 1 cut(s) 1471
HpaII CCGG 4 cut(s) 674, 1201, 1280, 1306
HphI GGTGA 5 cut(s) 127, 229, 287, 440, 1228
Hpy166II GTNNAC 8 cut(s) 384, 831, 1018, 1080, 1113, 1311, 1471, 1491
Hpy188I TCNGA 3 cut(s) 460, 766, 1389
Hpy188III TCNNGA 2 cut(s) 1141, 1480
Hpy8I GTNNAC 8 cut(s) 384, 831, 1018, 1080, 1113, 1311, 1471, 1491
HpyAV CCTTC 6 cut(s) 164, 241, 282, 499, 850, 1101
HpyCH4III ACNGT 6 cut(s) 376, 622, 1063, 1084, 1147, 1612
HpyF10VI GCNNNNNNNGC 8 cut(s) 494, 506, 572, 674, 737, 746, 755, 806
HpyF3I CTNAG 8 cut(s) 459, 711, 810, 855, 990, 1284, 1327, 1386
HspAI GCGC 3 cut(s) 666, 868, 966
KpnI GGTACC 2 cut(s) 61, 1423
KroI GCCGGC 1 cut(s) 1279
KroNI GCCGGC 1 cut(s) 1281
KspAI GTTAAC 1 cut(s) 1471
Kzo9I GATC 2 cut(s) 112, 820
LmnI GCTCC 4 cut(s) 485, 592, 608, 1579
LweI GCATC 5 cut(s) 94, 574, 696, 770, 1402
MaeI CTAG 2 cut(s) 6, 1299
MaeIII GTNAC 5 cut(s) 133, 275, 428, 722, 1316
MalI GATC 2 cut(s) 114, 822
MboI GATC 2 cut(s) 112, 820
MfeI CAATTG 1 cut(s) 1121
MhlI GDGCHC 2 cut(s) 363, 1036
MlsI TGGCCA 2 cut(s) 252, 1166
MluCI AATT 8 cut(s) 14, 72, 140, 525, 648, 1023, 1121, 1356
MluNI TGGCCA 2 cut(s) 252, 1166
MlyI GAGTC 3 cut(s) 304, 472, 1180
MmeI TCCRAC 1 cut(s) 1557
MnlI CCTC 9 cut(s) 207, 447, 592, 625, 811, 1003, 1006, 1522, 1546
Mox20I TGGCCA 2 cut(s) 252, 1166
Mph1103I ATGCAT 1 cut(s) 109
MroNI GCCGGC 1 cut(s) 1279
MscI TGGCCA 2 cut(s) 252, 1166
MseI TTAA 4 cut(s) 27, 245, 570, 1470
MslI CAYNNNNRTG 2 cut(s) 452, 1436
Msp20I TGGCCA 2 cut(s) 252, 1166
MspA1I CMGCKG 3 cut(s) 212, 563, 986
MspI CCGG 4 cut(s) 674, 1201, 1280, 1306
MspR9I CCNGG 3 cut(s) 186, 674, 1068
MunI CAATTG 1 cut(s) 1121
Mva1269I GAATGC 2 cut(s) 751, 1006
MvaI CCWGG 2 cut(s) 186, 1068
MvnI CGCG 2 cut(s) 483, 968
MwoI GCNNNNNNNGC 8 cut(s) 494, 506, 572, 674, 737, 746, 755, 806
NaeI GCCGGC 1 cut(s) 1281
NciI CCSGG 1 cut(s) 674
NcoI CCATGG 1 cut(s) 874
NdeI CATATG 3 cut(s) 109, 329, 595
NdeII GATC 2 cut(s) 112, 820
NgoMIV GCCGGC 1 cut(s) 1279
NlaIV GGNNCC 7 cut(s) 59, 487, 1255, 1304, 1421, 1503, 1557
NmuCI GTSAC 4 cut(s) 133, 275, 428, 1316
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 2 cut(s) 772, 1317
PagI TCATGA 1 cut(s) 1140
PciI ACATGT 2 cut(s) 768, 1313
PctI GAATGC 2 cut(s) 751, 1006
PdiI GCCGGC 1 cut(s) 1281
PfeI GAWTC 8 cut(s) 93, 979, 1117, 1131, 1323, 1371, 1508, 1562
PleI GAGTC 3 cut(s) 304, 472, 1180
PpsI GAGTC 3 cut(s) 304, 472, 1180
PscI ACATGT 2 cut(s) 768, 1313
Psp6I CCWGG 2 cut(s) 184, 1066
PspGI CCWGG 2 cut(s) 184, 1066
PspN4I GGNNCC 7 cut(s) 59, 487, 1255, 1304, 1421, 1503, 1557
PspPI GGNCC 1 cut(s) 1253
PstI CTGCAG 1 cut(s) 786
PvuII CAGCTG 1 cut(s) 563
RsaI GTAC 3 cut(s) 59, 1060, 1421
RsaNI GTAC 3 cut(s) 58, 1059, 1420
RseI CAYNNNNRTG 2 cut(s) 452, 1436
SalI GTCGAC 1 cut(s) 829
SaqAI TTAA 4 cut(s) 27, 245, 570, 1470
Sau3AI GATC 2 cut(s) 112, 820
Sau96I GGNCC 1 cut(s) 1253
ScaI AGTACT 1 cut(s) 1060
SchI GAGTC 3 cut(s) 304, 472, 1180
ScrFI CCNGG 3 cut(s) 186, 674, 1068
SduI GDGCHC 2 cut(s) 363, 1036
SfaNI GCATC 5 cut(s) 94, 574, 696, 770, 1402
SfcI CTRYAG 2 cut(s) 782, 931
SinI GGWCC 1 cut(s) 1253
SmiMI CAYNNNNRTG 2 cut(s) 452, 1436
Sse9I AATT 8 cut(s) 14, 72, 140, 525, 648, 1023, 1121, 1356
SsiI CCGC 6 cut(s) 210, 215, 483, 500, 871, 984
SspMI CTAG 2 cut(s) 6, 1299
StyD4I CCNGG 3 cut(s) 184, 672, 1066
StyI CCWWGG 1 cut(s) 874
TaaI ACNGT 6 cut(s) 376, 622, 1063, 1084, 1147, 1612
TaqI TCGA 4 cut(s) 830, 1008, 1095, 1511
TasI AATT 8 cut(s) 14, 72, 140, 525, 648, 1023, 1121, 1356
TatI WGTACW 1 cut(s) 1058
TauI GCSGC 1 cut(s) 873
TfiI GAWTC 8 cut(s) 93, 979, 1117, 1131, 1323, 1371, 1508, 1562
Tru1I TTAA 4 cut(s) 27, 245, 570, 1470
Tru9I TTAA 4 cut(s) 27, 245, 570, 1470
TscAI CASTG 5 cut(s) 73, 610, 733, 1167, 1187
TseFI GTSAC 4 cut(s) 133, 275, 428, 1316
Tsp45I GTSAC 4 cut(s) 133, 275, 428, 1316
TspDTI ATGAA 6 cut(s) 481, 716, 1013, 1081, 1129, 1563
TspGWI ACGGA 1 cut(s) 1335
TspRI CASTG 5 cut(s) 73, 610, 733, 1167, 1187
VpaK11BI GGWCC 1 cut(s) 1253
XapI RAATTY 1 cut(s) 525
XceI RCATGY 2 cut(s) 772, 1317
XcmI CCANNNNNNNNNTGG 1 cut(s) 260
XmiI GTMKAC 3 cut(s) 383, 830, 1310
XspI CTAG 2 cut(s) 6, 1299
ZrmI AGTACT 1 cut(s) 1060
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.