Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002207.1

Orthogroup ID

OG0008199

Physical Location & Seq

Genomic Coordinates Reverse (-)

54460 .. 57791

Gene Structure 3332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002207.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

atggctagagaacaattacaggtgctcaacgcacttgatgttgcgaaaacacaatggtaccatttcactgcaatcatcattgctggaatgggattcttcacagatgcatatgatctattctgcatatcccttgtcaccaaattgcttggccgcatatactaccacattgaaggggccgaaaaacctgggacattgcctcccaatgtctccgctgcggtgaatggtgtagccttctgtggaacattaactggccaactcttctttggctggcttggtgacaaaatgggaaggaagaaggtgtatggcatgactcttatgctcatggtcatatgttctattgcttcaggtctctcgtttgggcatgaccccaagactgtgatgtctactctttgcttctttcggttctggcttggtttcggtattggtggtgactaccctctttcggccaccatcatgtctgagtatgctaacaagaagactcgcggcgccttcattgctgcggtgtttgccatgcaagggtttggaattttggctggtgggatatttgcaatcatttgttcagctgcgtttaatgccaagtttgatgttccagcatatgaggtcagtggagctgcctcaactgttccacaagcagactatctctggcgaattatactgatggtaggcgcaatcccggcagcaatgacttactactggcgaatgaagatgcctgagactgctcgttacactgcccttgttgccaagaatgcaaagcaggctgcatcagacatgtcaaaggttctgcaggttgagattgaagaaacagccaaggttgaggatcagcagacgactaatgcctttgctttgttctctaaggagtttatgcgccgccatggacttcacttgcttggaacaacaagcacatggttcttgcttgacattgcatactacagctcaaatctgttccaaaaggatatcttcagcgcgattggatggattcccgctgctaagactatgaatgctatcgaggaggtttacaaaattgcaagagcacagacgcttattgctatgtgcagtactgtcccaggctactggtttacagttgctttcatcgacaggattggaaggtttgcgattcaattgatgggattcttcttcatgacagtatttatgtttgcactggccattccctataaccactggactcacaaggataaccatattggatttgtggtgatgtactcattgacattcttctttgccaactttggtcccaatgccaccacatttgttgtgccagctgagattttccctgctaggttccggtctacatgtcacggaatctcagcagcatcagggaagctcggtgctataattggtgcatttggattcttgtatttggctcagaaccaggacaaggcaaaggctgatgcagggtaccctgctggcattggagtgaaaaacgcactcattgtgttgggtgttgttaactttttcgggatattgttcactttcttggtgcctgaatcgaatggcaagtcattggaggagatgtcaggcgagaatgaagaggaacctgaatctgcgttggagttggagcagcaatcaggcgagctccacgacggaggctccggtgagtactcgatcatcgatggtgctgcaggctgtctttatcaagtccggcacgacgaggaatcagagagagatccaccactcaccggatccttcatgggcggaagacgacgtcgattgcatacgacgaagaagctccggttgtggcgtttgcttccgagtcggagaggaactggattaatcttagagcggcagccggagttcgagtccgagtccgggtcgggtccggagttcaagctggagttcgatctctctctctctcttctgtctctttcgccttcaacagccaaagatcgactgacatcatcaacgtcgattatcctccagtgctcgacgcaggttgtggcagagaagaaagatgattgggtgcccaaagcatcttcctcgagcattccttcgtctgaaactccttcagagtcgccggcgatgttctcatcgagcaatagcccaccaagtccgacgccggcaggtttgtcgcctgagggtgctctggtcttgggtgcctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005315 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008509 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0012505 GO:0015075 GO:0015291 GO:0015318 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0031226 GO:0033993 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0097305 GO:0098656 GO:1901683 GO:1901684 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

705

Amino Acids

77.08

Weight (kDa)

6.35

Isoelectric Point (pI)

45.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38940 AT3G54700 AT3G54700
fragaria_vesca	FvH4_2g21540 FvH4_2g21540
malus_domestica	MD05G1198100.v1.1 MD05G1198300.v1.1 MD10G1184700.v1.1
prunus_persica	Prupe.8G224500_v2.0.a1 Prupe.8G224500_v2.0.a1 Prupe.8G224500_v2.0.a1
pyrus_communis	pycom10g16000
rosa_chinensis	RchiOBHm_Chr6g0288211
rosa_laevigata	RLG00000012429
rosa_multiflora	Rmu_sc0002207.1_g000017
rosa_roxburghii	Rroxscaffold_7G00180390
rosa_rugosa	Rorug06G0194800
rosa_samantha	Rh6AG305400 Rh6BG311400 Rh6CG319300 Rh6DG304500
rosa_wichuraiana	Rw0G014410 Rw6G026440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	379
AatII	GACGTC	1 cut(s)	1726
Acc36I	ACCTGC	3 cut(s)	775, 1939, 2069
Acc65I	GGTACC	2 cut(s)	57, 1416
AccB1I	GGYRCC	6 cut(s)	57, 485, 1416, 1498, 1978, 2111
AccBSI	CCGCTC	1 cut(s)	1801
AccI	GTMKAC	2 cut(s)	383, 1307
AccII	CGCG	2 cut(s)	483, 965
AccIII	TCCGGA	1 cut(s)	1837
AciI	CCGC	9 cut(s)	151, 210, 215, 483, 500, 868, 981, 1713, 1801
AclWI	GGATC	4 cut(s)	825, 1679, 1695, 1708
AcoI	YGGCCR	4 cut(s)	148, 250, 444, 1161
AcsI	RAATTY	1 cut(s)	525
AcuI	CTGAAG	3 cut(s)	327, 943, 2007
AcyI	GRCGYC	3 cut(s)	486, 1723, 2072
AfaI	GTAC	5 cut(s)	59, 1057, 1220, 1418, 1619
AfiI	CCNNNNNNNGG	5 cut(s)	442, 516, 1396, 1697, 1827
AflIII	ACRYGT	2 cut(s)	768, 1310
AgsI	TTSAA	5 cut(s)	170, 797, 1118, 1846, 1893
AjnI	CCWGG	3 cut(s)	184, 1063, 1389
AluBI	AGCT	8 cut(s)	563, 611, 933, 1280, 1342, 1594, 1747, 1849
AluI	AGCT	8 cut(s)	563, 611, 933, 1280, 1342, 1594, 1747, 1849
Alw21I	GWGCWC	5 cut(s)	27, 1033, 1596, 1943, 2101
Alw26I	GTCTC	4 cut(s)	211, 353, 707, 1884
AlwI	GGATC	4 cut(s)	825, 1679, 1695, 1708
Ama87I	CYCGRG	1 cut(s)	1996
Aor13HI	TCCGGA	1 cut(s)	1837
AoxI	GGCC	5 cut(s)	148, 174, 250, 444, 1161
ApoI	RAATTY	1 cut(s)	525
ArsI	GACNNNNNNTTYG	2 cut(s)	1502, 1534
AseI	ATTAAT	1 cut(s)	1790
Asp718I	GGTACC	2 cut(s)	57, 1416
AspLEI	GCGC	4 cut(s)	488, 668, 867, 965
AspS9I	GGNCC	3 cut(s)	174, 1250, 1835
AsuC2I	CCSGG	2 cut(s)	674, 1828
AsuHPI	GGTGA	7 cut(s)	127, 229, 287, 440, 1225, 1625, 1687
AvaI	CYCGRG	1 cut(s)	1996
AvaII	GGWCC	2 cut(s)	1250, 1835
AxyI	CCTNAGG	1 cut(s)	2091
BaeGI	GKGCMC	1 cut(s)	1983
BaeI	ACNNNNGTAYC	2 cut(s)	41, 74
BalI	TGGCCA	2 cut(s)	252, 1163
BamHI	GGATCC	1 cut(s)	1700
BanI	GGYRCC	6 cut(s)	57, 485, 1416, 1498, 1978, 2111
BanII	GRGCYC	1 cut(s)	1596
BbsI	GAAGAC	2 cut(s)	482, 1723
Bbv12I	GWGCWC	5 cut(s)	27, 1033, 1596, 1943, 2101
BccI	CCATC	5 cut(s)	458, 652, 966, 1117, 1625
BcgI	CGANNNNNNTGC	6 cut(s)	1619, 1653, 1977, 2011, 2067, 2101
BciT130I	CCWGG	3 cut(s)	186, 1065, 1391
BcnI	CCSGG	2 cut(s)	674, 1828
BcoDI	GTCTC	4 cut(s)	211, 353, 707, 1884
BfaI	CTAG	3 cut(s)	6, 1296, 2116
BfmI	CTRYAG	3 cut(s)	782, 928, 1638
BfoI	RGCGCY	1 cut(s)	489
BfuAI	ACCTGC	3 cut(s)	775, 1939, 2069
BmcAI	AGTACT	2 cut(s)	1057, 1619
Bme1390I	CCNGG	5 cut(s)	186, 674, 1065, 1391, 1828
Bme18I	GGWCC	2 cut(s)	1250, 1835
BmeT110I	CYCGRG	1 cut(s)	1996
BmgT120I	GGNCC	3 cut(s)	174, 1250, 1835
BmrFI	CCNGG	5 cut(s)	186, 674, 1065, 1391, 1828
BmsI	GCATC	6 cut(s)	94, 696, 770, 1340, 1399, 1997
BpiI	GAAGAC	2 cut(s)	482, 1723
BpmI	CTGGAG	2 cut(s)	1871, 1919
BpuMI	CCSGG	2 cut(s)	674, 1828
Bsa29I	ATCGAT	1 cut(s)	1629
BsaHI	GRCGYC	3 cut(s)	486, 1723, 2072
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	4 cut(s)	185, 807, 871, 1063
BsaWI	WCCGGW	5 cut(s)	1302, 1610, 1697, 1749, 1837
BsaXI	ACNNNNNCTCC	8 cut(s)	181, 211, 1517, 1547, 1592, 1622, 1802, 1832
Bsc4I	CCNNNNNNNGG	5 cut(s)	442, 516, 1396, 1697, 1827
Bse118I	RCCGGY	2 cut(s)	2032, 2074
Bse1I	ACTGG	7 cut(s)	253, 698, 1076, 1164, 1184, 1789, 1936
Bse21I	CCTNAGG	1 cut(s)	2091
Bse3DI	GCAATG	5 cut(s)	78, 191, 492, 687, 918
BseAI	TCCGGA	1 cut(s)	1837
BseBI	CCWGG	3 cut(s)	186, 1065, 1391
BseCI	ATCGAT	1 cut(s)	1629
BseDI	CCNNGG	4 cut(s)	185, 807, 871, 1063
BseGI	GGATG	1 cut(s)	977
BseLI	CCNNNNNNNGG	5 cut(s)	442, 516, 1396, 1697, 1827
BseMI	GCAATG	5 cut(s)	78, 191, 492, 687, 918
BseMII	CTCAG	6 cut(s)	450, 702, 1272, 1338, 1397, 2082
BseNI	ACTGG	7 cut(s)	253, 698, 1076, 1164, 1184, 1789, 1936
BseRI	GAGGAG	2 cut(s)	1022, 1541
BseSI	GKGCMC	1 cut(s)	1983
BsgI	GTGCAG	1 cut(s)	1072
Bsh1236I	CGCG	2 cut(s)	483, 965
BshFI	GGCC	5 cut(s)	150, 176, 252, 446, 1163
BshNI	GGYRCC	6 cut(s)	57, 485, 1416, 1498, 1978, 2111
BshVI	ATCGAT	1 cut(s)	1629
BsiHKAI	GWGCWC	5 cut(s)	27, 1033, 1596, 1943, 2101
BsiHKCI	CYCGRG	1 cut(s)	1996
BslFI	GGGAC	3 cut(s)	202, 1046, 1236
BslI	CCNNNNNNNGG	5 cut(s)	442, 516, 1396, 1697, 1827
BsmAI	GTCTC	4 cut(s)	211, 353, 707, 1884
BsmFI	GGGAC	3 cut(s)	202, 1046, 1236
BsmI	GAATGC	3 cut(s)	751, 1003, 2001
BsnI	GGCC	5 cut(s)	150, 176, 252, 446, 1163
Bso31I	GGTCTC	1 cut(s)	353
BsoBI	CYCGRG	1 cut(s)	1996
Bsp1286I	GDGCHC	6 cut(s)	27, 1033, 1596, 1943, 1983, 2101
Bsp13I	TCCGGA	1 cut(s)	1837
Bsp143I	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
Bsp19I	CCATGG	1 cut(s)	871
BspACI	CCGC	9 cut(s)	151, 210, 215, 483, 500, 868, 981, 1713, 1801
BspANI	GGCC	5 cut(s)	150, 176, 252, 446, 1163
BspCNI	CTCAG	6 cut(s)	451, 703, 1273, 1337, 1396, 2083
BspDI	ATCGAT	1 cut(s)	1629
BspEI	TCCGGA	1 cut(s)	1837
BspFNI	CGCG	2 cut(s)	483, 965
BspHI	TCATGA	1 cut(s)	1137
BspMAI	CTGCAG	2 cut(s)	786, 1642
BspMI	ACCTGC	3 cut(s)	775, 1939, 2069
BspPI	GGATC	4 cut(s)	825, 1679, 1695, 1708
BspT107I	GGYRCC	6 cut(s)	57, 485, 1416, 1498, 1978, 2111
BspTNI	GGTCTC	1 cut(s)	353
BsrBI	CCGCTC	1 cut(s)	1801
BsrDI	GCAATG	5 cut(s)	78, 191, 492, 687, 918
BsrFI	RCCGGY	2 cut(s)	2032, 2074
BsrI	ACTGG	7 cut(s)	253, 698, 1076, 1164, 1184, 1789, 1936
BssAI	RCCGGY	2 cut(s)	2032, 2074
BssECI	CCNNGG	4 cut(s)	185, 807, 871, 1063
BssMI	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
BssNI	GRCGYC	3 cut(s)	486, 1723, 2072
BssT1I	CCWWGG	2 cut(s)	807, 871
Bst2UI	CCWGG	3 cut(s)	186, 1065, 1391
Bst4CI	ACNGT	5 cut(s)	376, 622, 1060, 1081, 1144
Bst6I	CTCTTC	3 cut(s)	263, 1542, 1878
BstACI	GRCGYC	3 cut(s)	486, 1723, 2072
BstC8I	GCNNGC	8 cut(s)	269, 756, 1278, 1426, 1592, 1642, 2034, 2076
BstDEI	CTNAG	9 cut(s)	459, 711, 852, 987, 1281, 1324, 1383, 1795, 2091
BstDSI	CCRYGG	1 cut(s)	871
BstF5I	GGATG	1 cut(s)	977
BstFNI	CGCG	2 cut(s)	483, 965
BstH2I	RGCGCY	1 cut(s)	489
BstHHI	GCGC	4 cut(s)	488, 668, 867, 965
BstKTI	GATC	7 cut(s)	115, 820, 1626, 1687, 1703, 1861, 1906
BstMAI	GTCTC	4 cut(s)	211, 353, 707, 1884
BstMBI	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
BstMWI	GCNNNNNNNGC	7 cut(s)	494, 506, 572, 674, 737, 746, 755
BstNI	CCWGG	3 cut(s)	186, 1065, 1391
BstNSI	RCATGY	2 cut(s)	772, 1314
BstSCI	CCNGG	5 cut(s)	184, 672, 1063, 1389, 1826
BstSFI	CTRYAG	3 cut(s)	782, 928, 1638
BstSLI	GKGCMC	1 cut(s)	1983
BstUI	CGCG	2 cut(s)	483, 965
BstV2I	GAAGAC	2 cut(s)	482, 1723
BstX2I	RGATCY	2 cut(s)	1684, 1700
BstXI	CCANNNNNNTGG	1 cut(s)	1071
BstYI	RGATCY	2 cut(s)	1684, 1700
Bsu15I	ATCGAT	1 cut(s)	1629
Bsu36I	CCTNAGG	1 cut(s)	2091
BsuRI	GGCC	5 cut(s)	150, 176, 252, 446, 1163
BsuTUI	ATCGAT	1 cut(s)	1629
BtgI	CCRYGG	1 cut(s)	871
BtgZI	GCGATG	1 cut(s)	2051
BtsCI	GGATG	1 cut(s)	977
BtsI	GCAGTG	2 cut(s)	66, 726
BtsIMutI	CAGTG	6 cut(s)	66, 610, 726, 1157, 1177, 1943
BveI	ACCTGC	3 cut(s)	775, 1939, 2069
Cac8I	GCNNGC	8 cut(s)	269, 756, 1278, 1426, 1592, 1642, 2034, 2076
CciI	TCATGA	1 cut(s)	1137
CfoI	GCGC	4 cut(s)	488, 668, 867, 965
Cfr10I	RCCGGY	2 cut(s)	2032, 2074
Cfr13I	GGNCC	3 cut(s)	174, 1250, 1835
ClaI	ATCGAT	1 cut(s)	1629
CseI	GACGC	3 cut(s)	1045, 1954, 2080
Csp6I	GTAC	5 cut(s)	58, 1056, 1219, 1417, 1618
CspCI	CAANNNNNGTGG	4 cut(s)	1249, 1252, 1284, 1287
CviQI	GTAC	5 cut(s)	58, 1056, 1219, 1417, 1618
DdeI	CTNAG	9 cut(s)	459, 711, 852, 987, 1281, 1324, 1383, 1795, 2091
DinI	GGCGCC	1 cut(s)	487
DpnI	GATC	7 cut(s)	114, 819, 1625, 1686, 1702, 1860, 1905
DpnII	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
DrdI	GACNNNNNNGTC	1 cut(s)	379
DseDI	GACNNNNNNGTC	1 cut(s)	379
EaeI	YGGCCR	4 cut(s)	148, 250, 444, 1161
Eam1104I	CTCTTC	3 cut(s)	263, 1542, 1878
EarI	CTCTTC	3 cut(s)	263, 1542, 1878
EciI	GGCGGA	1 cut(s)	1728
Ecl136II	GAGCTC	1 cut(s)	1594
Eco130I	CCWWGG	2 cut(s)	807, 871
Eco24I	GRGCYC	1 cut(s)	1596
Eco31I	GGTCTC	1 cut(s)	353
Eco32I	GATATC	1 cut(s)	955
Eco47I	GGWCC	2 cut(s)	1250, 1835
Eco53kI	GAGCTC	1 cut(s)	1594
Eco57I	CTGAAG	3 cut(s)	327, 943, 2007
Eco81I	CCTNAGG	1 cut(s)	2091
Eco88I	CYCGRG	1 cut(s)	1996
EcoICRI	GAGCTC	1 cut(s)	1594
EcoRII	CCWGG	3 cut(s)	184, 1063, 1389
EcoRV	GATATC	1 cut(s)	955
EcoT14I	CCWWGG	2 cut(s)	807, 871
EcoT22I	ATGCAT	1 cut(s)	109
EcoT38I	GRGCYC	1 cut(s)	1596
EgeI	GGCGCC	1 cut(s)	487
EheI	GGCGCC	1 cut(s)	487
ErhI	CCWWGG	2 cut(s)	807, 871
FalI	AAGNNNNNCTT	2 cut(s)	941, 973
FaqI	GGGAC	3 cut(s)	202, 1046, 1236
FauI	CCCGC	1 cut(s)	988
FauNDI	CATATG	3 cut(s)	109, 329, 595
FblI	GTMKAC	2 cut(s)	383, 1307
FokI	GGATG	1 cut(s)	984
FriOI	GRGCYC	1 cut(s)	1596
FspBI	CTAG	3 cut(s)	6, 1296, 2116
GlaI	GCGC	4 cut(s)	487, 667, 866, 964
GsuI	CTGGAG	2 cut(s)	1871, 1919
HaeII	RGCGCY	1 cut(s)	489
HaeIII	GGCC	5 cut(s)	150, 176, 252, 446, 1163
HgaI	GACGC	3 cut(s)	1045, 1954, 2080
HhaI	GCGC	4 cut(s)	488, 668, 867, 965
Hin1I	GRCGYC	3 cut(s)	486, 1723, 2072
Hin6I	GCGC	4 cut(s)	486, 666, 865, 963
HinP1I	GCGC	4 cut(s)	486, 666, 865, 963
HincII	GTYRAC	1 cut(s)	1468
HindII	GTYRAC	1 cut(s)	1468
HpaI	GTTAAC	1 cut(s)	1468
HphI	GGTGA	7 cut(s)	127, 229, 287, 440, 1225, 1625, 1687
Hpy166II	GTNNAC	6 cut(s)	384, 1015, 1077, 1308, 1468, 1488
Hpy188III	TCNNGA	3 cut(s)	1138, 1477, 1838
Hpy8I	GTNNAC	6 cut(s)	384, 1015, 1077, 1308, 1468, 1488
Hpy99I	CGWCG	8 cut(s)	1604, 1670, 1725, 1728, 1741, 1927, 1948, 2074
HpyCH4III	ACNGT	5 cut(s)	376, 622, 1060, 1081, 1144
HpyCH4IV	ACGT	2 cut(s)	1723, 1922
HpyF10VI	GCNNNNNNNGC	7 cut(s)	494, 506, 572, 674, 737, 746, 755
HpyF3I	CTNAG	9 cut(s)	459, 711, 852, 987, 1281, 1324, 1383, 1795, 2091
HpySE526I	ACGT	2 cut(s)	1723, 1922
Hsp92I	GRCGYC	3 cut(s)	486, 1723, 2072
HspAI	GCGC	4 cut(s)	486, 666, 865, 963
KasI	GGCGCC	1 cut(s)	485
Kpn2I	TCCGGA	1 cut(s)	1837
KpnI	GGTACC	2 cut(s)	61, 1420
KroI	GCCGGC	2 cut(s)	2032, 2074
KroNI	GCCGGC	2 cut(s)	2034, 2076
KspAI	GTTAAC	1 cut(s)	1468
Kzo9I	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
LmnI	GCTCC	5 cut(s)	608, 1576, 1599, 1613, 1752
LweI	GCATC	6 cut(s)	94, 696, 770, 1340, 1399, 1997
MaeI	CTAG	3 cut(s)	6, 1296, 2116
MaeII	ACGT	2 cut(s)	1723, 1922
MaeIII	GTNAC	5 cut(s)	133, 275, 428, 722, 1313
MalI	GATC	7 cut(s)	114, 819, 1625, 1686, 1702, 1860, 1905
MbiI	CCGCTC	1 cut(s)	1801
MboI	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
MfeI	CAATTG	1 cut(s)	1118
MflI	RGATCY	2 cut(s)	1684, 1700
MhlI	GDGCHC	6 cut(s)	27, 1033, 1596, 1943, 1983, 2101
MlsI	TGGCCA	2 cut(s)	252, 1163
MluCI	AATT	7 cut(s)	14, 140, 525, 648, 1020, 1118, 1353
MluNI	TGGCCA	2 cut(s)	252, 1163
Mly113I	GGCGCC	1 cut(s)	486
MlyI	GAGTC	7 cut(s)	304, 472, 1177, 1780, 1826, 1832, 2036
MmeI	TCCRAC	4 cut(s)	1548, 1554, 1754, 2093
Mox20I	TGGCCA	2 cut(s)	252, 1163
Mph1103I	ATGCAT	1 cut(s)	109
MreI	CGCCGGCG	1 cut(s)	2032
MroI	TCCGGA	1 cut(s)	1837
MroNI	GCCGGC	2 cut(s)	2032, 2074
MscI	TGGCCA	2 cut(s)	252, 1163
MseI	TTAA	4 cut(s)	245, 570, 1467, 1790
MslI	CAYNNNNRTG	2 cut(s)	452, 1433
Msp20I	TGGCCA	2 cut(s)	252, 1163
MspA1I	CMGCKG	4 cut(s)	212, 563, 983, 1280
MspR9I	CCNGG	5 cut(s)	186, 674, 1065, 1391, 1828
MunI	CAATTG	1 cut(s)	1118
Mva1269I	GAATGC	3 cut(s)	751, 1003, 2001
MvaI	CCWGG	3 cut(s)	186, 1065, 1391
MvnI	CGCG	2 cut(s)	483, 965
MwoI	GCNNNNNNNGC	7 cut(s)	494, 506, 572, 674, 737, 746, 755
NaeI	GCCGGC	2 cut(s)	2034, 2076
NarI	GGCGCC	1 cut(s)	486
NciI	CCSGG	2 cut(s)	674, 1828
NcoI	CCATGG	1 cut(s)	871
NdeI	CATATG	3 cut(s)	109, 329, 595
NdeII	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
NgoMIV	GCCGGC	2 cut(s)	2032, 2074
NmuCI	GTSAC	4 cut(s)	133, 275, 428, 1313
NsiI	ATGCAT	1 cut(s)	109
NspI	RCATGY	2 cut(s)	772, 1314
PaeR7I	CTCGAG	1 cut(s)	1996
PagI	TCATGA	1 cut(s)	1137
PciI	ACATGT	2 cut(s)	768, 1310
PctI	GAATGC	3 cut(s)	751, 1003, 2001
PdiI	GCCGGC	2 cut(s)	2034, 2076
PfeI	GAWTC	9 cut(s)	93, 976, 1114, 1128, 1320, 1368, 1505, 1559, 1673
PflFI	GACNNNGTC	1 cut(s)	1722
PleI	GAGTC	7 cut(s)	304, 472, 1177, 1779, 1825, 1831, 2035
PluTI	GGCGCC	1 cut(s)	489
PpsI	GAGTC	7 cut(s)	304, 472, 1177, 1779, 1825, 1831, 2035
PscI	ACATGT	2 cut(s)	768, 1310
PshBI	ATTAAT	1 cut(s)	1790
Psp124BI	GAGCTC	1 cut(s)	1596
Psp6I	CCWGG	3 cut(s)	184, 1063, 1389
PspGI	CCWGG	3 cut(s)	184, 1063, 1389
PspPI	GGNCC	3 cut(s)	174, 1250, 1835
PspXI	VCTCGAGB	1 cut(s)	1996
PstI	CTGCAG	2 cut(s)	786, 1642
PsuI	RGATCY	2 cut(s)	1684, 1700
PsyI	GACNNNGTC	1 cut(s)	1722
PvuII	CAGCTG	2 cut(s)	563, 1280
RsaI	GTAC	5 cut(s)	59, 1057, 1220, 1418, 1619
RsaNI	GTAC	5 cut(s)	58, 1056, 1219, 1417, 1618
RseI	CAYNNNNRTG	2 cut(s)	452, 1433
SacI	GAGCTC	1 cut(s)	1596
SaqAI	TTAA	4 cut(s)	245, 570, 1467, 1790
Sau3AI	GATC	7 cut(s)	112, 817, 1623, 1684, 1700, 1858, 1903
Sau96I	GGNCC	3 cut(s)	174, 1250, 1835
ScaI	AGTACT	2 cut(s)	1057, 1619
SchI	GAGTC	7 cut(s)	304, 472, 1177, 1780, 1826, 1832, 2036
ScrFI	CCNGG	5 cut(s)	186, 674, 1065, 1391, 1828
SduI	GDGCHC	6 cut(s)	27, 1033, 1596, 1943, 1983, 2101
SfaNI	GCATC	6 cut(s)	94, 696, 770, 1340, 1399, 1997
SfcI	CTRYAG	3 cut(s)	782, 928, 1638
SfoI	GGCGCC	1 cut(s)	487
Sfr274I	CTCGAG	1 cut(s)	1996
SgrAI	CRCCGGYG	1 cut(s)	2032
SinI	GGWCC	2 cut(s)	1250, 1835
SlaI	CTCGAG	1 cut(s)	1996
SmiMI	CAYNNNNRTG	2 cut(s)	452, 1433
SmlI	CTYRAG	1 cut(s)	1996
SmoI	CTYRAG	1 cut(s)	1996
Sse9I	AATT	7 cut(s)	14, 140, 525, 648, 1020, 1118, 1353
SsiI	CCGC	9 cut(s)	151, 210, 215, 483, 500, 868, 981, 1713, 1801
SspDI	GGCGCC	1 cut(s)	485
SspMI	CTAG	3 cut(s)	6, 1296, 2116
SstI	GAGCTC	1 cut(s)	1596
StyD4I	CCNGG	5 cut(s)	184, 672, 1063, 1389, 1826
StyI	CCWWGG	2 cut(s)	807, 871
TaaI	ACNGT	5 cut(s)	376, 622, 1060, 1081, 1144
TaiI	ACGT	2 cut(s)	1726, 1925
TasI	AATT	7 cut(s)	14, 140, 525, 648, 1020, 1118, 1353
TatI	WGTACW	3 cut(s)	1055, 1218, 1617
TauI	GCSGC	4 cut(s)	153, 486, 870, 1804
TfiI	GAWTC	9 cut(s)	93, 976, 1114, 1128, 1320, 1368, 1505, 1559, 1673
Tru1I	TTAA	4 cut(s)	245, 570, 1467, 1790
Tru9I	TTAA	4 cut(s)	245, 570, 1467, 1790
TscAI	CASTG	6 cut(s)	73, 610, 733, 1164, 1184, 1943
TseFI	GTSAC	4 cut(s)	133, 275, 428, 1313
Tsp45I	GTSAC	4 cut(s)	133, 275, 428, 1313
TspDTI	ATGAA	7 cut(s)	481, 716, 1010, 1078, 1126, 1560, 1696
TspGWI	ACGGA	2 cut(s)	1332, 1617
TspRI	CASTG	6 cut(s)	73, 610, 733, 1164, 1184, 1943
Tth111I	GACNNNGTC	1 cut(s)	1722
VpaK11BI	GGWCC	2 cut(s)	1250, 1835
VspI	ATTAAT	1 cut(s)	1790
XapI	RAATTY	1 cut(s)	525
XceI	RCATGY	2 cut(s)	772, 1314
XcmI	CCANNNNNNNNNTGG	1 cut(s)	260
XhoI	CTCGAG	1 cut(s)	1996
XmiI	GTMKAC	2 cut(s)	383, 1307
XspI	CTAG	3 cut(s)	6, 1296, 2116
ZraI	GACGTC	1 cut(s)	1724
ZrmI	AGTACT	2 cut(s)	1057, 1619
Zsp2I	ATGCAT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.