pycom10g20180

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
23137103 .. 23137878
776 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g20180.2

Sequence Viewer

Length: 324 bp
ATGCAGAAAGAAGAAGCAAAGCTCTCTCCTGAAGCCAAGGATCTCATTTGCAAGCTCTTCTGCAATGTCGAGCAGAGGCTTGGGATGCAAGGAGCTCATGAAATAAAAGCTCACCCATGGTTTGATGGGTTACAATGGGATAGATTATATCAGATGGAAGCCGCTTTCATACCAGAGGTTAACAATGAGTTAGATACTCAAAACTTTGAGAAGTTTGATGAGTTGGGGGCTCCAGTAGAGACTTCGACAAAATCTGGTCGGTGGAGAAAGGCAAGTATCGAAGTTTACTTGAGTTTGCATCTGTATAGTGTGCCTGCAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

12.36

Weight (kDa)

5.15

Isoelectric Point (pI)

33.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022281)

Species Orthologous Gene IDs
malus_domestica MD10G1242900.v1.1
pyrus_communis pycom05g24910 pycom10g20180
rosa_multiflora Rmu_co8438539.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 162
AclWI GGATC 1 cut(s) 48
AcuI CTGAAG 1 cut(s) 51
AluBI AGCT 4 cut(s) 22, 55, 95, 110
AluI AGCT 4 cut(s) 22, 55, 95, 110
Alw21I GWGCWC 1 cut(s) 97
Alw26I GTCTC 1 cut(s) 233
AlwI GGATC 1 cut(s) 48
AsuHPI GGTGA 1 cut(s) 104
BanII GRGCYC 2 cut(s) 97, 232
Bbv12I GWGCWC 1 cut(s) 97
BccI CCATC 2 cut(s) 119, 148
BcoDI GTCTC 1 cut(s) 233
BisI GCNGC 1 cut(s) 162
BlsI GCNGC 1 cut(s) 163
BmiI GGNNCC 1 cut(s) 231
BmsI GCATC 2 cut(s) 75, 307
BpmI CTGGAG 1 cut(s) 216
BpuEI CTTGAG 1 cut(s) 310
BsaJI CCNNGG 2 cut(s) 36, 116
Bse1I ACTGG 1 cut(s) 233
Bse3DI GCAATG 1 cut(s) 70
BseDI CCNNGG 2 cut(s) 36, 116
BseGI GGATG 1 cut(s) 90
BseMI GCAATG 1 cut(s) 70
BseNI ACTGG 1 cut(s) 233
BsiHKAI GWGCWC 1 cut(s) 97
BsmAI GTCTC 1 cut(s) 233
Bsp1286I GDGCHC 2 cut(s) 97, 232
Bsp143I GATC 1 cut(s) 40
Bsp19I CCATGG 1 cut(s) 116
BspACI CCGC 1 cut(s) 162
BspHI TCATGA 1 cut(s) 97
BspLI GGNNCC 1 cut(s) 231
BspPI GGATC 1 cut(s) 48
BspQI GCTCTTC 1 cut(s) 62
BsrDI GCAATG 1 cut(s) 70
BsrI ACTGG 1 cut(s) 233
BssECI CCNNGG 2 cut(s) 36, 116
BssMI GATC 1 cut(s) 40
BssT1I CCWWGG 2 cut(s) 36, 116
Bst6I CTCTTC 1 cut(s) 62
BstC8I GCNNGC 2 cut(s) 53, 315
BstDSI CCRYGG 1 cut(s) 116
BstF5I GGATG 1 cut(s) 90
BstKTI GATC 1 cut(s) 43
BstMAI GTCTC 1 cut(s) 233
BstMBI GATC 1 cut(s) 40
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstX2I RGATCY 1 cut(s) 40
BstYI RGATCY 1 cut(s) 40
BtgI CCRYGG 1 cut(s) 116
BtsCI GGATG 1 cut(s) 90
Cac8I GCNNGC 2 cut(s) 53, 315
CciI TCATGA 1 cut(s) 97
CviAII CATG 2 cut(s) 98, 117
CviJI RGCY 8 cut(s) 22, 35, 55, 79, 95, 110, 161, 230
CviKI_1 RGCY 8 cut(s) 22, 35, 55, 79, 95, 110, 161, 230
DpnI GATC 1 cut(s) 42
DpnII GATC 1 cut(s) 40
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
Ecl136II GAGCTC 1 cut(s) 95
Eco130I CCWWGG 2 cut(s) 36, 116
Eco24I GRGCYC 2 cut(s) 97, 232
Eco53kI GAGCTC 1 cut(s) 95
Eco57I CTGAAG 1 cut(s) 51
EcoICRI GAGCTC 1 cut(s) 95
EcoT14I CCWWGG 2 cut(s) 36, 116
EcoT38I GRGCYC 2 cut(s) 97, 232
ErhI CCWWGG 2 cut(s) 36, 116
FaeI CATG 2 cut(s) 101, 120
FaiI YATR 5 cut(s) 99, 118, 148, 170, 306
FatI CATG 2 cut(s) 97, 116
Fnu4HI GCNGC 1 cut(s) 162
FokI GGATG 1 cut(s) 97
FriOI GRGCYC 2 cut(s) 97, 232
Fsp4HI GCNGC 1 cut(s) 162
GluI GCNGC 1 cut(s) 162
GsuI CTGGAG 1 cut(s) 216
Hin1II CATG 2 cut(s) 101, 120
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HpaI GTTAAC 1 cut(s) 181
HphI GGTGA 1 cut(s) 104
Hpy166II GTNNAC 2 cut(s) 181, 286
Hpy188I TCNGA 1 cut(s) 153
Hpy188III TCNNGA 2 cut(s) 29, 98
Hpy8I GTNNAC 2 cut(s) 181, 286
HpyCH4V TGCA 6 cut(s) 4, 51, 63, 88, 298, 317
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
Hsp92II CATG 2 cut(s) 101, 120
KspAI GTTAAC 1 cut(s) 181
Kzo9I GATC 1 cut(s) 40
LguI GCTCTTC 1 cut(s) 62
LmnI GCTCC 2 cut(s) 92, 235
LpnPI CCDG 4 cut(s) 42, 186, 240, 246
LweI GCATC 2 cut(s) 75, 307
MaeIII GTNAC 1 cut(s) 129
MalI GATC 1 cut(s) 42
MboI GATC 1 cut(s) 40
MboII GAAGA 2 cut(s) 23, 49
MflI RGATCY 1 cut(s) 40
MhlI GDGCHC 2 cut(s) 97, 232
MluCI AATT 1 cut(s) 319
MnlI CCTC 2 cut(s) 69, 169
MseI TTAA 1 cut(s) 180
MwoI GCNNNNNNNGC 1 cut(s) 85
NcoI CCATGG 1 cut(s) 116
NdeII GATC 1 cut(s) 40
NlaIII CATG 2 cut(s) 101, 120
NlaIV GGNNCC 1 cut(s) 231
PagI TCATGA 1 cut(s) 97
PciSI GCTCTTC 1 cut(s) 62
PkrI GCNGC 1 cut(s) 163
Psp124BI GAGCTC 1 cut(s) 97
PspN4I GGNNCC 1 cut(s) 231
PsuI RGATCY 1 cut(s) 40
SacI GAGCTC 1 cut(s) 97
SapI GCTCTTC 1 cut(s) 62
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 1 cut(s) 162
Sau3AI GATC 1 cut(s) 40
SduI GDGCHC 2 cut(s) 97, 232
SetI ASST 5 cut(s) 24, 57, 97, 112, 180
SfaNI GCATC 2 cut(s) 75, 307
SmlI CTYRAG 1 cut(s) 289
SmoI CTYRAG 1 cut(s) 289
Sse9I AATT 1 cut(s) 319
SsiI CCGC 1 cut(s) 162
SstI GAGCTC 1 cut(s) 97
StyI CCWWGG 2 cut(s) 36, 116
TaqI TCGA 3 cut(s) 69, 245, 279
TasI AATT 1 cut(s) 319
TauI GCSGC 1 cut(s) 164
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TspDTI ATGAA 2 cut(s) 114, 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.