Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0013862

Physical Location & Seq

Genomic Coordinates Reverse (-)

1945051 .. 1948138

Gene Structure 3088 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGGAGTTTGAATACTTAGATATCAGCTTACATGAAGACTTGTATAAACTTGTCCAATATTCATGTGAAGAGGTTTTCTCAACAAAAGAACAATTAAATAAGGCTATGAGACTTTACACTACCTTTTTGGAGCCAATGCTGGGTGTTTCTTCTCGGCCCAATGATTCAGAGGATGATGAAGATGTTGACAAAAGTAGGAATCGGGCTAAGAATTGTACTGTGTCAAGCATAGGAGAAAGCGATGGAAGTCCTGGTGGTGATTCTGCCACATTGAATTTTAAGCAGCCCAAATCTGTGTGTAATGAAGAAGAAAATGCTTTAGCAGAAGTGGAAAGTTTGGCTAACGGGGATAGCTCAGCTAAAGAAGATGGAAGTCGTGATGCAGATCTTGTCTGTAGGAAAGATTCTATATCTGAGAAAATTCAACTAGAAAAAGACCAGAAGAATATGGATGTCCATAAGAAAAGGTATCTGGTCACCGGCATGGACAATGCGTGGCCGTCCAGTCAACCATCACATCCAACTGGAGCAGATAATAATCATGGTAGAACGAGCTTGGAAGTGTTATCAGGGTGTGCTGCAACCACGTCAAGGCCTGGTGCTTCTATTAGTGGCAATGACCATTTACAGAAAGGAAATGCTGATGCTGTTCTGTTGTCAGAGGGTGTCGATAATGCAAAACCTGCTTTAATTGCTAATGGAGTGTTTCCAGAAAGCACTAAAGTTAACAGTCGTCATGAAGAGTCTGTTGGGCCCTCCAAAATTGAAAAGGAAGAGGGGGAATTATCACCAATTGCTGACTTTGGGGAGGATAACTTTGTTGTCTCTGGAGATGCTGGGGTGCAAGCTATGCCTAAGGAAAACCGCAGTGTTGAAAGCAGACCGTTTCAGTCTGGGAATGGGGAAGACATTAGTTGTCAGGAAGCTGGAGAAAATGATGCAGATGCAGATGATGAAAATAGTGAAAATGTTTCCGAGGCTGGTGAAGATGTCTCTGGCAGTGAGACAGCTGGTGATGAATGTTCCAGAGAAGAGCAAGGCGATGATGAAGATGCTGAACCGGATGACATTGATGGTAAGGCTGAGAGTGAAGGTGAGGCTGAAGGGATGGTGGATGGGCACCATGTTGGAGGAGATGGAATGTCTTTGCAATTGTCAGAACGTTTTCTTTTGTCTGTGAAACCTCTTGCGAAGCATGTACCAGGTTCTTTACTTGAAGAAAGGAAAGACTCTCGCGTTTTCTATGGGAATGATAATTTCTATGTGCTTTGTAGGCTTCATCAAATTCTATACGAAAGGATTTTATCTGCAAAAACAAGTTCCACAGGTGCAGAAATGAAATGGAGAACTTCAAAGGATGGCAGTTCTTCGGATCTGTATGCCAGATTTTTGAGTGCTCTATACAATTTGCTTGATGGATCTGTTGATAATGCAAAATTTGAGGATGAATGCCGAGCTATTATTGGAAACAAGTCTTATATATTATTCACCTTGGACAAATTAATATATAAATTTGTCAAACAGCTTCAAACTGTTGCAAGTGATGAGACGGACAATAAGCTGCTTCAATTATATGAATATGAAAAGTCCCGGAAAACTGGGAAGTTAATTGATTCTGTTTATCATGAAAATGCACGTGTCCTCATTCATGAGGAGAGTATTTACAGATTGGAATTTTCCTCTTCACCCTCCCGGGTGTCCATCCAGCTGATGGACAGTGTGAGTGAAAAGCCTGAGGTGTTTGCAGTTTCCATGGAACCTAATTTTGCATCCTATCTGCACAACGAATTTCTGCCGGTTTATCCTGGAAAAAAGGAGCCGCATGGGATTACCCTTCAGAGAAACAAGCGCAAATATGCAGGGCAAGATGAATCCTCTGCCTTTTGCAAGGCCATGGACGGTGTTCAGTTAGTCAATGGTTTGGAGTGCAAGATAGCTTGCAACTCATCCAAGATCTCTTACGTTCTTGACACAGAAGATTACTTCTTCCGTATGAGAAGGAAAAGGAGAACATCTGAGGCCCGATCACCAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000785 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098732 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04139 ko04919 ko05016 ko05202 map04139 map04919 map05016 map05202

Pfam Domains

Protein Families

PAH Sin3_corepress Sin3a_C

Protein Analysis

679

Amino Acids

74.97

Weight (kDa)

4.73

Isoelectric Point (pI)

49.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sin3a_C	PF16879	414 - 662	2.6e-49	C-terminal domain of Sin3a protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013862)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10250
fragaria_vesca	FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790 FvH4_6g49790
malus_domestica	MD09G1041300.v1.1 MD17G1042600.v1.1
pyrus_communis	pycom111g03230 pycom17g03820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	691
AccB1I	GGYRCC	1 cut(s)	1119
AccB7I	CCANNNNNTGG	1 cut(s)	1711
AccII	CGCG	1 cut(s)	1236
AciI	CCGC	2 cut(s)	865, 1820
AclI	AACGTT	1 cut(s)	1162
AclWI	GGATC	2 cut(s)	1380, 1426
AcoI	YGGCCR	1 cut(s)	497
AcsI	RAATTY	7 cut(s)	274, 420, 1284, 1436, 1511, 1673, 1787
AcuI	CTGAAG	2 cut(s)	1122, 1820
AcvI	CACGTG	1 cut(s)	1637
AfaI	GTAC	2 cut(s)	217, 1200
AfiI	CCNNNNNNNGG	3 cut(s)	140, 591, 1711
AflIII	ACRYGT	1 cut(s)	1636
AgsI	TTSAA	9 cut(s)	11, 274, 425, 767, 875, 1217, 1353, 1529, 1568
AjiI	CACGTC	1 cut(s)	588
AjnI	CCWGG	4 cut(s)	250, 595, 1201, 1804
AjuI	GAANNNNNNNTTGG	2 cut(s)	732, 764
Alw21I	GWGCWC	1 cut(s)	1399
Alw26I	GTCTC	5 cut(s)	103, 829, 997, 998, 1541
AlwI	GGATC	2 cut(s)	1380, 1426
Ama87I	CYCGRG	1 cut(s)	1692
AoxI	GGCC	6 cut(s)	155, 497, 593, 752, 1890, 2019
ApaI	GGGCCC	1 cut(s)	756
ApeKI	GCWGC	3 cut(s)	283, 578, 1561
ApoI	RAATTY	7 cut(s)	274, 420, 1284, 1436, 1511, 1673, 1787
AseI	ATTAAT	1 cut(s)	1502
Asp700I	GAANNNNTTC	1 cut(s)	1164
AspLEI	GCGC	1 cut(s)	1851
AspS9I	GGNCC	4 cut(s)	156, 752, 753, 2020
AsuC2I	CCSGG	3 cut(s)	1591, 1693, 1694
AsuHPI	GGTGA	9 cut(s)	269, 469, 780, 995, 1025, 1106, 1480, 1677, 2019
AvaI	CYCGRG	1 cut(s)	1692
AxyI	CCTNAGG	2 cut(s)	855, 1734
BaeGI	GKGCMC	2 cut(s)	756, 1122
BanI	GGYRCC	1 cut(s)	1119
BanII	GRGCYC	1 cut(s)	756
BbrPI	CACGTG	1 cut(s)	1637
BbsI	GAAGAC	2 cut(s)	42, 912
Bbv12I	GWGCWC	1 cut(s)	1399
BbvI	GCAGC	3 cut(s)	295, 565, 1548
BceAI	ACGGC	1 cut(s)	484
BciT130I	CCWGG	4 cut(s)	252, 597, 1203, 1806
BcnI	CCSGG	3 cut(s)	1591, 1693, 1694
BcoDI	GTCTC	5 cut(s)	103, 829, 997, 998, 1541
BfaI	CTAG	1 cut(s)	428
BfmI	CTRYAG	1 cut(s)	394
BfuAI	ACCTGC	1 cut(s)	691
BglII	AGATCT	2 cut(s)	385, 1953
BisI	GCNGC	4 cut(s)	284, 579, 1562, 1820
BlpI	GCTNAGC	1 cut(s)	355
BlsI	GCNGC	4 cut(s)	285, 580, 1563, 1821
Bme1390I	CCNGG	7 cut(s)	252, 597, 1203, 1591, 1693, 1694, 1806
BmeT110I	CYCGRG	1 cut(s)	1692
BmgBI	CACGTC	1 cut(s)	588
BmgT120I	GGNCC	4 cut(s)	156, 752, 753, 2020
BmiI	GGNNCC	5 cut(s)	132, 754, 1121, 1758, 1818
BmrFI	CCNGG	7 cut(s)	252, 597, 1203, 1591, 1693, 1694, 1806
BmrI	ACTGGG	1 cut(s)	1608
BmsI	GCATC	7 cut(s)	370, 634, 823, 928, 934, 1042, 1778
BmuI	ACTGGG	1 cut(s)	1608
BpiI	GAAGAC	2 cut(s)	42, 912
BplI	GAGNNNNNCTC	2 cut(s)	62, 94
BpmI	CTGGAG	3 cut(s)	546, 849, 948
Bpu1102I	GCTNAGC	1 cut(s)	355
BpuMI	CCSGG	3 cut(s)	1591, 1693, 1694
BsaAI	YACGTR	1 cut(s)	1637
BsaBI	GATNNNNATC	2 cut(s)	384, 537
BsaJI	CCNNGG	5 cut(s)	975, 1491, 1692, 1752, 1893
BsaWI	WCCGGW	1 cut(s)	1060
Bsc4I	CCNNNNNNNGG	3 cut(s)	140, 591, 1711
Bse118I	RCCGGY	2 cut(s)	479, 1795
Bse1I	ACTGG	3 cut(s)	504, 529, 1603
Bse21I	CCTNAGG	2 cut(s)	855, 1734
Bse3DI	GCAATG	1 cut(s)	622
Bse8I	GATNNNNATC	2 cut(s)	384, 537
BseBI	CCWGG	4 cut(s)	252, 597, 1203, 1806
BseDI	CCNNGG	5 cut(s)	975, 1491, 1692, 1752, 1893
BseJI	GATNNNNATC	2 cut(s)	384, 537
BseLI	CCNNNNNNNGG	3 cut(s)	140, 591, 1711
BseMI	GCAATG	1 cut(s)	622
BseMII	CTCAG	5 cut(s)	369, 405, 1074, 1725, 2007
BseNI	ACTGG	3 cut(s)	504, 529, 1603
BseRI	GAGGAG	2 cut(s)	1146, 1667
BseSI	GKGCMC	2 cut(s)	756, 1122
BseXI	GCAGC	3 cut(s)	295, 565, 1548
BseYI	CCCAGC	2 cut(s)	139, 836
BsgI	GTGCAG	2 cut(s)	1350, 1763
Bsh1236I	CGCG	1 cut(s)	1236
BshFI	GGCC	6 cut(s)	157, 499, 595, 754, 1892, 2021
BshNI	GGYRCC	1 cut(s)	1119
BsiHKAI	GWGCWC	1 cut(s)	1399
BsiHKCI	CYCGRG	1 cut(s)	1692
BsiSI	CCGG	5 cut(s)	480, 1061, 1591, 1693, 1796
BslFI	GGGAC	1 cut(s)	1573
BslI	CCNNNNNNNGG	3 cut(s)	140, 591, 1711
BsmAI	GTCTC	5 cut(s)	103, 829, 997, 998, 1541
BsmBI	CGTCTC	1 cut(s)	1541
BsmFI	GGGAC	1 cut(s)	1573
BsmI	GAATGC	1 cut(s)	1454
BsnI	GGCC	6 cut(s)	157, 499, 595, 754, 1892, 2021
BsoBI	CYCGRG	1 cut(s)	1692
Bsp120I	GGGCCC	1 cut(s)	752
Bsp1286I	GDGCHC	3 cut(s)	756, 1122, 1399
Bsp143I	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
Bsp1720I	GCTNAGC	1 cut(s)	355
Bsp19I	CCATGG	2 cut(s)	1752, 1893
BspACI	CCGC	2 cut(s)	865, 1820
BspANI	GGCC	6 cut(s)	157, 499, 595, 754, 1892, 2021
BspCNI	CTCAG	5 cut(s)	368, 406, 1075, 1726, 2008
BspFNI	CGCG	1 cut(s)	1236
BspHI	TCATGA	3 cut(s)	736, 1624, 1648
BspLI	GGNNCC	5 cut(s)	132, 754, 1121, 1758, 1818
BspMI	ACCTGC	1 cut(s)	691
BspPI	GGATC	2 cut(s)	1380, 1426
BspQI	GCTCTTC	1 cut(s)	1026
BspT107I	GGYRCC	1 cut(s)	1119
BsrDI	GCAATG	1 cut(s)	622
BsrFI	RCCGGY	2 cut(s)	479, 1795
BsrI	ACTGG	3 cut(s)	504, 529, 1603
BssAI	RCCGGY	2 cut(s)	479, 1795
BssECI	CCNNGG	5 cut(s)	975, 1491, 1692, 1752, 1893
BssMI	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
BssT1I	CCWWGG	3 cut(s)	1491, 1752, 1893
Bst2UI	CCWGG	4 cut(s)	252, 597, 1203, 1806
Bst4CI	ACNGT	6 cut(s)	220, 731, 885, 1534, 1718, 1901
Bst6I	CTCTTC	5 cut(s)	63, 735, 768, 1026, 1687
BstAPI	GCANNNNNTGC	2 cut(s)	683, 850
BstBAI	YACGTR	1 cut(s)	1637
BstC8I	GCNNGC	2 cut(s)	846, 1939
BstDEI	CTNAG	8 cut(s)	16, 207, 355, 414, 855, 1083, 1734, 2016
BstDSI	CCRYGG	2 cut(s)	1752, 1893
BstEII	GGTNACC	1 cut(s)	475
BstFNI	CGCG	1 cut(s)	1236
BstHHI	GCGC	1 cut(s)	1851
BstKTI	GATC	5 cut(s)	388, 1375, 1421, 1956, 2027
BstMAI	GTCTC	5 cut(s)	103, 829, 997, 998, 1541
BstMBI	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
BstMWI	GCNNNNNNNGC	4 cut(s)	683, 692, 850, 1273
BstNI	CCWGG	4 cut(s)	252, 597, 1203, 1806
BstNSI	RCATGY	1 cut(s)	1199
BstPI	GGTNACC	1 cut(s)	475
BstSCI	CCNGG	7 cut(s)	250, 595, 1201, 1589, 1691, 1692, 1804
BstSFI	CTRYAG	1 cut(s)	394
BstSLI	GKGCMC	2 cut(s)	756, 1122
BstUI	CGCG	1 cut(s)	1236
BstV1I	GCAGC	3 cut(s)	295, 565, 1548
BstV2I	GAAGAC	2 cut(s)	42, 912
BstX2I	RGATCY	4 cut(s)	385, 1372, 1418, 1953
BstYI	RGATCY	4 cut(s)	385, 1372, 1418, 1953
Bsu36I	CCTNAGG	2 cut(s)	855, 1734
BsuRI	GGCC	6 cut(s)	157, 499, 595, 754, 1892, 2021
BtgI	CCRYGG	2 cut(s)	1752, 1893
BtgZI	GCGATG	2 cut(s)	255, 1056
BtrI	CACGTC	1 cut(s)	588
BtsI	GCAGTG	2 cut(s)	874, 1006
BtsIMutI	CAGTG	3 cut(s)	874, 1006, 1723
BveI	ACCTGC	1 cut(s)	691
Cac8I	GCNNGC	2 cut(s)	846, 1939
CciI	TCATGA	3 cut(s)	736, 1624, 1648
CfoI	GCGC	1 cut(s)	1851
Cfr10I	RCCGGY	2 cut(s)	479, 1795
Cfr13I	GGNCC	4 cut(s)	156, 752, 753, 2020
Cfr9I	CCCGGG	1 cut(s)	1692
CsiI	ACCWGGT	1 cut(s)	1201
Csp6I	GTAC	2 cut(s)	216, 1199
CviQI	GTAC	2 cut(s)	216, 1199
DdeI	CTNAG	8 cut(s)	16, 207, 355, 414, 855, 1083, 1734, 2016
DpnI	GATC	5 cut(s)	387, 1374, 1420, 1955, 2026
DpnII	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
EaeI	YGGCCR	1 cut(s)	497
Eam1104I	CTCTTC	5 cut(s)	63, 735, 768, 1026, 1687
EarI	CTCTTC	5 cut(s)	63, 735, 768, 1026, 1687
Eco130I	CCWWGG	3 cut(s)	1491, 1752, 1893
Eco147I	AGGCCT	1 cut(s)	595
Eco24I	GRGCYC	1 cut(s)	756
Eco32I	GATATC	1 cut(s)	22
Eco57I	CTGAAG	2 cut(s)	1122, 1820
Eco72I	CACGTG	1 cut(s)	1637
Eco81I	CCTNAGG	2 cut(s)	855, 1734
Eco88I	CYCGRG	1 cut(s)	1692
Eco91I	GGTNACC	1 cut(s)	475
EcoO109I	RGGNCCY	1 cut(s)	753
EcoO65I	GGTNACC	1 cut(s)	475
EcoRII	CCWGG	4 cut(s)	250, 595, 1201, 1804
EcoRV	GATATC	1 cut(s)	22
EcoT14I	CCWWGG	3 cut(s)	1491, 1752, 1893
EcoT38I	GRGCYC	1 cut(s)	756
ErhI	CCWWGG	3 cut(s)	1491, 1752, 1893
Esp3I	CGTCTC	1 cut(s)	1541
FaqI	GGGAC	1 cut(s)	1573
Fnu4HI	GCNGC	4 cut(s)	284, 579, 1562, 1820
FriOI	GRGCYC	1 cut(s)	756
Fsp4HI	GCNGC	4 cut(s)	284, 579, 1562, 1820
FspBI	CTAG	1 cut(s)	428
GlaI	GCGC	1 cut(s)	1850
GluI	GCNGC	4 cut(s)	284, 579, 1562, 1820
GsaI	CCCAGC	2 cut(s)	143, 840
GsuI	CTGGAG	3 cut(s)	546, 849, 948
HaeIII	GGCC	6 cut(s)	157, 499, 595, 754, 1892, 2021
HapII	CCGG	5 cut(s)	480, 1061, 1591, 1693, 1796
HhaI	GCGC	1 cut(s)	1851
Hin6I	GCGC	1 cut(s)	1849
HinP1I	GCGC	1 cut(s)	1849
HincII	GTYRAC	3 cut(s)	187, 509, 727
HindII	GTYRAC	3 cut(s)	187, 509, 727
HinfI	GANTC	8 cut(s)	164, 199, 260, 404, 743, 1229, 1613, 1871
HpaI	GTTAAC	1 cut(s)	727
HpaII	CCGG	5 cut(s)	480, 1061, 1591, 1693, 1796
HphI	GGTGA	9 cut(s)	269, 469, 780, 995, 1025, 1106, 1480, 1677, 2019
Hpy166II	GTNNAC	3 cut(s)	187, 509, 727
Hpy188I	TCNGA	8 cut(s)	169, 415, 661, 976, 1159, 1372, 1839, 2017
Hpy188III	TCNNGA	9 cut(s)	377, 710, 737, 828, 920, 1026, 1625, 1649, 1967
Hpy8I	GTNNAC	3 cut(s)	187, 509, 727
HpyAV	CCTTC	4 cut(s)	1085, 1097, 1844, 1992
HpyCH4III	ACNGT	6 cut(s)	220, 731, 885, 1534, 1718, 1901
HpyCH4IV	ACGT	4 cut(s)	587, 1162, 1636, 1962
HpyF10VI	GCNNNNNNNGC	4 cut(s)	683, 692, 850, 1273
HpyF3I	CTNAG	8 cut(s)	16, 207, 355, 414, 855, 1083, 1734, 2016
HpySE526I	ACGT	4 cut(s)	587, 1162, 1636, 1962
HspAI	GCGC	1 cut(s)	1849
KspAI	GTTAAC	1 cut(s)	727
Kzo9I	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
LguI	GCTCTTC	1 cut(s)	1026
LmnI	GCTCC	3 cut(s)	130, 527, 1816
Lsp1109I	GCAGC	3 cut(s)	295, 565, 1548
LweI	GCATC	7 cut(s)	370, 634, 823, 928, 934, 1042, 1778
MabI	ACCWGGT	1 cut(s)	1201
MaeI	CTAG	1 cut(s)	428
MaeII	ACGT	4 cut(s)	587, 1162, 1636, 1962
MaeIII	GTNAC	1 cut(s)	475
MalI	GATC	5 cut(s)	387, 1374, 1420, 1955, 2026
MboI	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
MfeI	CAATTG	2 cut(s)	792, 1151
MflI	RGATCY	4 cut(s)	385, 1372, 1418, 1953
MhlI	GDGCHC	3 cut(s)	756, 1122, 1399
MlyI	GAGTC	2 cut(s)	752, 1223
MmeI	TCCRAC	2 cut(s)	545, 1108
MroXI	GAANNNNTTC	1 cut(s)	1164
MseI	TTAA	6 cut(s)	95, 279, 689, 726, 1502, 1607
MslI	CAYNNNNRTG	2 cut(s)	482, 1629
MspA1I	CMGCKG	2 cut(s)	1010, 1708
MspI	CCGG	5 cut(s)	480, 1061, 1591, 1693, 1796
MspR9I	CCNGG	7 cut(s)	252, 597, 1203, 1591, 1693, 1694, 1806
MunI	CAATTG	2 cut(s)	792, 1151
Mva1269I	GAATGC	1 cut(s)	1454
MvaI	CCWGG	4 cut(s)	252, 597, 1203, 1806
MvnI	CGCG	1 cut(s)	1236
MwoI	GCNNNNNNNGC	4 cut(s)	683, 692, 850, 1273
NciI	CCSGG	3 cut(s)	1591, 1693, 1694
NcoI	CCATGG	2 cut(s)	1752, 1893
NdeII	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
NlaIV	GGNNCC	5 cut(s)	132, 754, 1121, 1758, 1818
NmeAIII	GCCGAG	2 cut(s)	133, 1478
NmuCI	GTSAC	1 cut(s)	475
NspI	RCATGY	1 cut(s)	1199
PagI	TCATGA	3 cut(s)	736, 1624, 1648
PceI	AGGCCT	1 cut(s)	595
PciSI	GCTCTTC	1 cut(s)	1026
PctI	GAATGC	1 cut(s)	1454
PdmI	GAANNNNTTC	1 cut(s)	1164
PfeI	GAWTC	6 cut(s)	164, 199, 260, 404, 1613, 1871
PflMI	CCANNNNNTGG	1 cut(s)	1711
PfoI	TCCNGGA	2 cut(s)	1589, 1804
PkrI	GCNGC	4 cut(s)	285, 580, 1563, 1821
PleI	GAGTC	2 cut(s)	751, 1223
PmaCI	CACGTG	1 cut(s)	1637
PmlI	CACGTG	1 cut(s)	1637
PpsI	GAGTC	2 cut(s)	751, 1223
Ppu21I	YACGTR	1 cut(s)	1637
PshBI	ATTAAT	1 cut(s)	1502
Psp1406I	AACGTT	1 cut(s)	1162
Psp6I	CCWGG	4 cut(s)	250, 595, 1201, 1804
PspCI	CACGTG	1 cut(s)	1637
PspEI	GGTNACC	1 cut(s)	475
PspFI	CCCAGC	2 cut(s)	139, 836
PspGI	CCWGG	4 cut(s)	250, 595, 1201, 1804
PspN4I	GGNNCC	5 cut(s)	132, 754, 1121, 1758, 1818
PspOMI	GGGCCC	1 cut(s)	752
PspPI	GGNCC	4 cut(s)	156, 752, 753, 2020
PsuI	RGATCY	4 cut(s)	385, 1372, 1418, 1953
PvuII	CAGCTG	2 cut(s)	1010, 1708
RsaI	GTAC	2 cut(s)	217, 1200
RsaNI	GTAC	2 cut(s)	216, 1199
RseI	CAYNNNNRTG	2 cut(s)	482, 1629
SapI	GCTCTTC	1 cut(s)	1026
SaqAI	TTAA	6 cut(s)	95, 279, 689, 726, 1502, 1607
SatI	GCNGC	4 cut(s)	284, 579, 1562, 1820
Sau3AI	GATC	5 cut(s)	385, 1372, 1418, 1953, 2024
Sau96I	GGNCC	4 cut(s)	156, 752, 753, 2020
SchI	GAGTC	2 cut(s)	752, 1223
ScrFI	CCNGG	7 cut(s)	252, 597, 1203, 1591, 1693, 1694, 1806
SduI	GDGCHC	3 cut(s)	756, 1122, 1399
SexAI	ACCWGGT	1 cut(s)	1201
SfaNI	GCATC	7 cut(s)	370, 634, 823, 928, 934, 1042, 1778
SfcI	CTRYAG	1 cut(s)	394
SmaI	CCCGGG	1 cut(s)	1694
SmiMI	CAYNNNNRTG	2 cut(s)	482, 1629
SseBI	AGGCCT	1 cut(s)	595
SsiI	CCGC	2 cut(s)	865, 1820
SspI	AATATT	1 cut(s)	59
SspMI	CTAG	1 cut(s)	428
StuI	AGGCCT	1 cut(s)	595
StyD4I	CCNGG	7 cut(s)	250, 595, 1201, 1589, 1691, 1692, 1804
StyI	CCWWGG	3 cut(s)	1491, 1752, 1893
TaaI	ACNGT	6 cut(s)	220, 731, 885, 1534, 1718, 1901
TaiI	ACGT	4 cut(s)	590, 1165, 1639, 1965
TaqI	TCGA	1 cut(s)	669
TatI	WGTACW	1 cut(s)	215
TauI	GCSGC	1 cut(s)	1822
TfiI	GAWTC	6 cut(s)	164, 199, 260, 404, 1613, 1871
Tru1I	TTAA	6 cut(s)	95, 279, 689, 726, 1502, 1607
Tru9I	TTAA	6 cut(s)	95, 279, 689, 726, 1502, 1607
TscAI	CASTG	3 cut(s)	874, 1006, 1723
TseFI	GTSAC	1 cut(s)	475
TseI	GCWGC	3 cut(s)	283, 578, 1561
Tsp45I	GTSAC	1 cut(s)	475
TspGWI	ACGGA	2 cut(s)	1565, 1979
TspMI	CCCGGG	1 cut(s)	1692
TspRI	CASTG	3 cut(s)	874, 1006, 1723
Van91I	CCANNNNNTGG	1 cut(s)	1711
VspI	ATTAAT	1 cut(s)	1502
XapI	RAATTY	7 cut(s)	274, 420, 1284, 1436, 1511, 1673, 1787
XceI	RCATGY	1 cut(s)	1199
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1708
XmaI	CCCGGG	1 cut(s)	1692
XmnI	GAANNNNTTC	1 cut(s)	1164
XspI	CTAG	1 cut(s)	428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.