Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0013820

Physical Location & Seq

Genomic Coordinates Reverse (-)

2609708 .. 2612764

Gene Structure 3057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGTCACCTGCTCTCTCCCTCTCCCTCTCCCTCTCTCCACTCTGCAAATCCCAGGACAATTCAAAGGACACCCACCTCCCCAAAAACCCTAACAAACAGAACCCATGTCACAAAACTCCCTCAAACTTCAAATCTACCAGAAGGTCGTTGTTAAATTCCACTTCACTGGGACTGACCCTGTTAGGAGCTGCAGGACCCCTCTCTGTTTCTAACCCTGCAAAAGCGGAGCCAGAGCCAGAGAGCCCGGCTGCGTCGACTTCGAGCAGAATGTCATACTCCAGGTTCTTGGAATACTTGGACCAAGACGCTGTGAAGAAGGTGGACTTATTTGAGAACGGCACCGTCGCGATCGCCGAGATTTTTAATCCGGCGTTGGAAAAAGTCCAGAGGGTTAAGATTCAGTTGCCTGGACTGCCACCGGAACTGCTGAGGAAAATGAGAGAGAAGAACGTAGATTTTGCAGCTCATCCAATGGAGGTTAATTGGTTGCCAGCAGTGCTGGATTTGTTGGGAAATTTTGCTTTTCCTTTGATCCTGCTCGGGACATTGCTGTTGAGGAGTAGTTCTTCAAACGTGCCAGGAGGCCCCAACTTGCCTTTTGGACTTGGAAGGAGCACAGCCAAATTTCAGATGGAGCCCAATACAGGGGTGACATTTGATGATGTGGCCGGAGTCGATGAAGCAAAGCAAGATTTCCAAGAGATTGTTGAATTCCTGAAAACCCCAGAAAAGTTTTCTGCAGTTGGAGCAAGAATTCCCAAAGGGGTTCTTCTCGTGGGGCCGCCGGGGACCGGAAAGACACTGCTGGCCAAGGCCATTGCAGGTGAAGCGGGGGTACCTTTCTTCTCTCTGTCAGGGTCAGAGTTCATTGAGATGTTTGTGGGAGTAGGAGCTTCTAGGGTTAGAGATTTGTTCAACAAGGCGAAGGCGAATTCTCCGTGCCTGGTTTTCATTGACGAGATAGATGCTGTGGGGAGGCAGAGAGGCACAGGAATCGGCGGCGGAAATGATGAGAGGGAGCAAACCCTGAATCAGCTGCTCACTGAAATGGATGGGTTTAGTGGGAACAGTGGAGTGATTGTCATCGCCGCCACAAACCGCCCTGAAATTCTTGATTCTGCTTTGCTTAGGGCTGGCAGATTCGACAGGCAGGTTAGCGTTGGATTACCGGATATAAGGGGAAGAGAAGAGATACTAAAGGTTCACAGCAGCAATAAGAGGCTTGATAAGGATGTTTCTCTGAATGTTATTGCCATGAGAACTCCTGGATTCAGTGGTGCAGACCTTGCAAACCTCATGAATGAAGCTGCCATTCTTGCTGGTAGGAGAGGCAAAAATCAGATAACAATGAAGGAAATCGATGACTCGATTGATCGAATTGTGGCGGGGATGGAAGGCACAAAAATGACAGATGGGAAGAGCCAAGTTCTTGTGGCTTACCATGAAGTTGGCCACGCTATTTGTGCGACACTGACTCCAGGCCATGATCCGGTGCAGAAGGTCTCTTTGATTCCGCGAGGCCAAGCACGCGGTTTGACATGGTTCATACCAGGCGAAGATCCTACTCTTGTTTCTAAGCAACAACTATTTGCTAGAATAGTTGGAGGTCTAGGAGGTAGGGCAGCTGAGGAGGTGATTTTTGGGGAACCAGAAATAACAACTGGTGCAGCGGGAGACTTGCAACAAATCACACAGATAGCAAGACAGATGGTGACAACGTTTGGGATGTCGGAGATTGGACCCTGGGCGCTGACAGATCCGGCAACACAAAACAGCGATGTCGTGCTAAGGATGCTGGCAAGAAACAGCATGTCTGAGAAGCTGGCGGAGGACATTGATTTGTCAGTGAGACGGATAATTGAAAGTGCATATGAGATGGCTAAGAAGCATGTGCGGAACAACAGGGAGGCCATCGATAAGTTAGTAGAAGTGCTTTTGGAAAAGGAGATTCTCACAGGAGATGAATTCAGTGCAATTCTGTCTGAATTCACAGATACTTCTGTGGCAAAGTTGGATAGGAAATCAGTAAGGGAGATGATTGAAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009668 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext PPR Peptidase_M41

Protein Analysis

683

Amino Acids

73.69

Weight (kDa)

5.84

Isoelectric Point (pI)

40.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	84 - 157	4.5e-07	FtsH Extracellular
AAA	PF00004	256 - 388	2.1e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	411 - 454	3.1e-14	AAA+ lid domain
Peptidase_M41	PF01434	470 - 659	2.3e-67	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15250 AT5G15250
fragaria_vesca	FvH4_6g48450 FvH4_6g48450 FvH4_6g48450
malus_domestica	MD09G1051800.v1.1
prunus_persica	Prupe.3G266900_v2.0.a1
pyrus_communis	pycom111g04310
rosa_chinensis	RchiOBHm_Chr2g0168361
rosa_laevigata	RLG00000021770
rosa_multiflora	Rmu_sc0003354.1_g000018
rosa_roxburghii	Rroxscaffold_2G00083110
rosa_rugosa	Rorug02G0533200.1
rosa_samantha	Rh2AG602300 Rh2BG615600 Rh2CG583300
rosa_wichuraiana	Rw0G019810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	16, 812
Acc36I	ACCTGC	3 cut(s)	16, 812, 1141
Acc65I	GGTACC	1 cut(s)	835
AccB1I	GGYRCC	2 cut(s)	338, 835
AccI	GTMKAC	1 cut(s)	254
AccII	CGCG	3 cut(s)	347, 1516, 1530
AclI	AACGTT	1 cut(s)	1718
AclWI	GGATC	4 cut(s)	526, 1481, 1553, 1751
AcoI	YGGCCR	3 cut(s)	666, 807, 1450
AcsI	RAATTY	9 cut(s)	154, 514, 623, 710, 753, 931, 1107, 1964, 1985
AfaI	GTAC	1 cut(s)	837
AfiI	CCNNNNNNNGG	4 cut(s)	644, 645, 791, 1489
AgsI	TTSAA	7 cut(s)	63, 130, 570, 710, 916, 1862, 2042
AjnI	CCWGG	9 cut(s)	51, 278, 406, 577, 942, 1264, 1477, 1549, 1742
AluBI	AGCT	7 cut(s)	188, 464, 893, 1036, 1307, 1625, 1822
AluI	AGCT	7 cut(s)	188, 464, 893, 1036, 1307, 1625, 1822
Alw21I	GWGCWC	1 cut(s)	617
Alw26I	GTCTC	3 cut(s)	1507, 1668, 1843
AlwI	GGATC	4 cut(s)	526, 1481, 1553, 1751
Ama87I	CYCGRG	1 cut(s)	539
AoxI	GGCC	9 cut(s)	583, 666, 779, 807, 813, 1450, 1480, 1519, 1908
ApeKI	GCWGC	8 cut(s)	188, 248, 461, 1036, 1209, 1307, 1622, 1667
ApoI	RAATTY	9 cut(s)	154, 514, 623, 710, 753, 931, 1107, 1964, 1985
AsiSI	GCGATCGC	1 cut(s)	351
Asp718I	GGTACC	1 cut(s)	835
AspLEI	GCGC	1 cut(s)	1750
AspS9I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
AsuC2I	CCSGG	2 cut(s)	245, 786
AsuHPI	GGTGA	4 cut(s)	661, 836, 1645, 1723
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	4 cut(s)	194, 298, 789, 1739
BaeI	ACNNNNGTAYC	2 cut(s)	1986, 2019
BalI	TGGCCA	2 cut(s)	809, 1452
BanI	GGYRCC	2 cut(s)	338, 835
BanII	GRGCYC	2 cut(s)	245, 639
BarI	GAAGNNNNNNTAC	2 cut(s)	819, 851
BauI	CACGAG	1 cut(s)	773
Bbv12I	GWGCWC	1 cut(s)	617
BbvCI	CCTCAGC	2 cut(s)	428, 1626
BbvI	GCAGC	8 cut(s)	175, 235, 473, 1023, 1221, 1294, 1634, 1679
BccI	CCATC	7 cut(s)	625, 1046, 1384, 1406, 1702, 1870, 1919
BceAI	ACGGC	1 cut(s)	352
BcgI	CGANNNNNNTGC	4 cut(s)	947, 976, 981, 1010
BciT130I	CCWGG	9 cut(s)	53, 280, 408, 579, 944, 1266, 1479, 1551, 1744
BcnI	CCSGG	2 cut(s)	245, 786
BcoDI	GTCTC	3 cut(s)	1507, 1668, 1843
BfaI	CTAG	4 cut(s)	897, 1593, 1610, 2047
BfmI	CTRYAG	2 cut(s)	189, 738
BfoI	RGCGCY	1 cut(s)	1751
BfuAI	ACCTGC	3 cut(s)	16, 812, 1141
Bme18I	GGWCC	4 cut(s)	194, 298, 789, 1739
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
BmrI	ACTGGG	1 cut(s)	176
BmsI	GCATC	2 cut(s)	955, 1782
BmuI	ACTGGG	1 cut(s)	176
BpmI	CTGGAG	2 cut(s)	262, 1461
Bpu10I	CCTNAGC	4 cut(s)	428, 1127, 1626, 1787
BpuMI	CCSGG	2 cut(s)	245, 786
Bsa29I	ATCGAT	2 cut(s)	1359, 1914
BsaBI	GATNNNNATC	1 cut(s)	1082
BsaI	GGTCTC	1 cut(s)	1507
BsaJI	CCNNGG	5 cut(s)	51, 785, 810, 1742, 1743
BsaWI	WCCGGW	4 cut(s)	418, 791, 1168, 1489
BsaXI	ACNNNNNCTCC	4 cut(s)	1065, 1095, 1459, 1489
Bsc4I	CCNNNNNNNGG	4 cut(s)	644, 645, 791, 1489
Bse1I	ACTGG	2 cut(s)	171, 1666
Bse3DI	GCAATG	2 cut(s)	545, 816
Bse8I	GATNNNNATC	1 cut(s)	1082
BseBI	CCWGG	9 cut(s)	53, 280, 408, 579, 944, 1266, 1479, 1551, 1744
BseCI	ATCGAT	2 cut(s)	1359, 1914
BseDI	CCNNGG	5 cut(s)	51, 785, 810, 1742, 1743
BseGI	GGATG	6 cut(s)	466, 1057, 1237, 1395, 1731, 1797
BseJI	GATNNNNATC	1 cut(s)	1082
BseLI	CCNNNNNNNGG	4 cut(s)	644, 645, 791, 1489
BseMI	GCAATG	2 cut(s)	545, 816
BseMII	CTCAG	3 cut(s)	419, 1617, 1806
BseNI	ACTGG	2 cut(s)	171, 1666
BseRI	GAGGAG	2 cut(s)	571, 1643
BseXI	GCAGC	8 cut(s)	175, 235, 473, 1023, 1221, 1294, 1634, 1679
BsgI	GTGCAG	3 cut(s)	1299, 1514, 1686
Bsh1236I	CGCG	3 cut(s)	347, 1516, 1530
Bsh1285I	CGRYCG	1 cut(s)	351
BshFI	GGCC	9 cut(s)	585, 668, 781, 809, 815, 1452, 1482, 1521, 1910
BshNI	GGYRCC	2 cut(s)	338, 835
BshVI	ATCGAT	2 cut(s)	1359, 1914
BsiEI	CGRYCG	1 cut(s)	351
BsiHKAI	GWGCWC	1 cut(s)	617
BsiHKCI	CYCGRG	1 cut(s)	539
BsiSI	CCGG	9 cut(s)	245, 368, 419, 669, 785, 792, 1169, 1490, 1760
BslFI	GGGAC	3 cut(s)	183, 556, 802
BslI	CCNNNNNNNGG	4 cut(s)	644, 645, 791, 1489
BsmAI	GTCTC	3 cut(s)	1507, 1668, 1843
BsmBI	CGTCTC	1 cut(s)	1843
BsmFI	GGGAC	3 cut(s)	183, 556, 802
BsnI	GGCC	9 cut(s)	585, 668, 781, 809, 815, 1452, 1482, 1521, 1910
Bso31I	GGTCTC	1 cut(s)	1507
BsoBI	CYCGRG	1 cut(s)	539
Bsp1286I	GDGCHC	3 cut(s)	245, 617, 639
Bsp143I	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
Bsp68I	TCGCGA	1 cut(s)	347
BspANI	GGCC	9 cut(s)	585, 668, 781, 809, 815, 1452, 1482, 1521, 1910
BspCNI	CTCAG	3 cut(s)	420, 1618, 1807
BspDI	ATCGAT	2 cut(s)	1359, 1914
BspFNI	CGCG	3 cut(s)	347, 1516, 1530
BspHI	TCATGA	1 cut(s)	1296
BspMAI	CTGCAG	2 cut(s)	193, 742
BspMI	ACCTGC	3 cut(s)	16, 812, 1141
BspPI	GGATC	4 cut(s)	526, 1481, 1553, 1751
BspQI	GCTCTTC	1 cut(s)	1412
BspT107I	GGYRCC	2 cut(s)	338, 835
BspTNI	GGTCTC	1 cut(s)	1507
BsrDI	GCAATG	2 cut(s)	545, 816
BsrI	ACTGG	2 cut(s)	171, 1666
BssECI	CCNNGG	5 cut(s)	51, 785, 810, 1742, 1743
BssMI	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
BssSI	CACGAG	1 cut(s)	773
BssT1I	CCWWGG	1 cut(s)	810
Bst2BI	CACGAG	1 cut(s)	773
Bst2UI	CCWGG	9 cut(s)	53, 280, 408, 579, 944, 1266, 1479, 1551, 1744
Bst4CI	ACNGT	2 cut(s)	343, 1070
Bst6I	CTCTTC	3 cut(s)	1177, 1182, 1412
BstAPI	GCANNNNNTGC	1 cut(s)	1286
BstC8I	GCNNGC	6 cut(s)	492, 807, 1135, 1528, 1797, 1824
BstDEI	CTNAG	7 cut(s)	428, 1127, 1575, 1626, 1787, 1815, 1881
BstF5I	GGATG	6 cut(s)	466, 1057, 1237, 1395, 1731, 1797
BstFNI	CGCG	3 cut(s)	347, 1516, 1530
BstH2I	RGCGCY	1 cut(s)	1751
BstHHI	GCGC	1 cut(s)	1750
BstKTI	GATC	6 cut(s)	351, 534, 1375, 1489, 1561, 1759
BstMAI	GTCTC	3 cut(s)	1507, 1668, 1843
BstMBI	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
BstMCI	CGRYCG	1 cut(s)	351
BstMWI	GCNNNNNNNGC	9 cut(s)	412, 496, 746, 827, 1286, 1316, 1463, 1527, 1792
BstNI	CCWGG	9 cut(s)	53, 280, 408, 579, 944, 1266, 1479, 1551, 1744
BstNSI	RCATGY	2 cut(s)	1813, 1892
BstSFI	CTRYAG	2 cut(s)	189, 738
BstUI	CGCG	3 cut(s)	347, 1516, 1530
BstV1I	GCAGC	8 cut(s)	175, 235, 473, 1023, 1221, 1294, 1634, 1679
BstX2I	RGATCY	2 cut(s)	1558, 1756
BstXI	CCANNNNNNTGG	3 cut(s)	166, 286, 1448
BstYI	RGATCY	2 cut(s)	1558, 1756
Bsu15I	ATCGAT	2 cut(s)	1359, 1914
BsuRI	GGCC	9 cut(s)	585, 668, 781, 809, 815, 1452, 1482, 1521, 1910
BsuTUI	ATCGAT	2 cut(s)	1359, 1914
BtgZI	GCGATG	2 cut(s)	1069, 1791
BtsCI	GGATG	6 cut(s)	466, 1057, 1237, 1395, 1731, 1797
BtsI	GCAGTG	2 cut(s)	501, 800
BtsIMutI	CAGTG	9 cut(s)	164, 501, 800, 1041, 1075, 1279, 1469, 1851, 1975
BtuMI	TCGCGA	1 cut(s)	347
BveI	ACCTGC	3 cut(s)	16, 812, 1141
Cac8I	GCNNGC	6 cut(s)	492, 807, 1135, 1528, 1797, 1824
CciI	TCATGA	1 cut(s)	1296
CfoI	GCGC	1 cut(s)	1750
Cfr13I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
ClaI	ATCGAT	2 cut(s)	1359, 1914
CseI	GACGC	2 cut(s)	240, 314
Csp6I	GTAC	1 cut(s)	836
CspCI	CAANNNNNGTGG	2 cut(s)	1442, 1477
CviAII	CATG	8 cut(s)	105, 1255, 1297, 1442, 1484, 1539, 1810, 1889
CviQI	GTAC	1 cut(s)	836
DdeI	CTNAG	7 cut(s)	428, 1127, 1575, 1626, 1787, 1815, 1881
DpnI	GATC	6 cut(s)	350, 533, 1374, 1488, 1560, 1758
DpnII	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
EaeI	YGGCCR	3 cut(s)	666, 807, 1450
Eam1104I	CTCTTC	3 cut(s)	1177, 1182, 1412
EarI	CTCTTC	3 cut(s)	1177, 1182, 1412
EciI	GGCGGA	2 cut(s)	1017, 1841
Eco130I	CCWWGG	1 cut(s)	810
Eco24I	GRGCYC	2 cut(s)	245, 639
Eco31I	GGTCTC	1 cut(s)	1507
Eco47I	GGWCC	4 cut(s)	194, 298, 789, 1739
Eco88I	CYCGRG	1 cut(s)	539
EcoO109I	RGGNCCY	2 cut(s)	194, 584
EcoRI	GAATTC	5 cut(s)	710, 753, 931, 1964, 1985
EcoRII	CCWGG	9 cut(s)	51, 278, 406, 577, 942, 1264, 1477, 1549, 1742
EcoT14I	CCWWGG	1 cut(s)	810
EcoT38I	GRGCYC	2 cut(s)	245, 639
ErhI	CCWWGG	1 cut(s)	810
Esp3I	CGTCTC	1 cut(s)	1843
FaeI	CATG	8 cut(s)	108, 1258, 1300, 1445, 1487, 1542, 1813, 1892
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 753, 785
FaqI	GGGAC	3 cut(s)	183, 556, 802
FatI	CATG	8 cut(s)	104, 1254, 1296, 1441, 1483, 1538, 1809, 1888
FauI	CCCGC	3 cut(s)	823, 1378, 1663
FauNDI	CATATG	1 cut(s)	1870
FblI	GTMKAC	1 cut(s)	254
FokI	GGATG	6 cut(s)	453, 1064, 1244, 1402, 1738, 1804
FriOI	GRGCYC	2 cut(s)	245, 639
FspBI	CTAG	4 cut(s)	897, 1593, 1610, 2047
GlaI	GCGC	1 cut(s)	1749
GsuI	CTGGAG	2 cut(s)	262, 1461
HaeII	RGCGCY	1 cut(s)	1751
HaeIII	GGCC	9 cut(s)	585, 668, 781, 809, 815, 1452, 1482, 1521, 1910
HapII	CCGG	9 cut(s)	245, 368, 419, 669, 785, 792, 1169, 1490, 1760
HgaI	GACGC	2 cut(s)	240, 314
HhaI	GCGC	1 cut(s)	1750
Hin1II	CATG	8 cut(s)	108, 1258, 1300, 1445, 1487, 1542, 1813, 1892
Hin6I	GCGC	1 cut(s)	1748
HinP1I	GCGC	1 cut(s)	1748
HincII	GTYRAC	1 cut(s)	255
HindII	GTYRAC	1 cut(s)	255
HpaII	CCGG	9 cut(s)	245, 368, 419, 669, 785, 792, 1169, 1490, 1760
HphI	GGTGA	4 cut(s)	661, 836, 1645, 1723
Hpy166II	GTNNAC	3 cut(s)	255, 322, 1204
Hpy188I	TCNGA	7 cut(s)	630, 862, 1242, 1341, 1732, 1816, 1984
Hpy188III	TCNNGA	6 cut(s)	346, 385, 541, 715, 1112, 1297
Hpy8I	GTNNAC	3 cut(s)	255, 322, 1204
Hpy99I	CGWCG	2 cut(s)	256, 347
HpyAV	CCTTC	7 cut(s)	135, 310, 603, 919, 1345, 1388, 1492
HpyCH4III	ACNGT	2 cut(s)	343, 1070
HpyCH4IV	ACGT	3 cut(s)	450, 573, 1718
HpyF10VI	GCNNNNNNNGC	9 cut(s)	412, 496, 746, 827, 1286, 1316, 1463, 1527, 1792
HpyF3I	CTNAG	7 cut(s)	428, 1127, 1575, 1626, 1787, 1815, 1881
HpySE526I	ACGT	3 cut(s)	450, 573, 1718
Hsp92II	CATG	8 cut(s)	108, 1258, 1300, 1445, 1487, 1542, 1813, 1892
HspAI	GCGC	1 cut(s)	1748
KpnI	GGTACC	1 cut(s)	839
Kzo9I	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
LguI	GCTCTTC	1 cut(s)	1412
LmnI	GCTCC	7 cut(s)	185, 226, 612, 634, 746, 890, 1018
Lsp1109I	GCAGC	8 cut(s)	175, 235, 473, 1023, 1221, 1294, 1634, 1679
LweI	GCATC	2 cut(s)	955, 1782
MaeI	CTAG	4 cut(s)	897, 1593, 1610, 2047
MaeII	ACGT	3 cut(s)	450, 573, 1718
MaeIII	GTNAC	4 cut(s)	3, 107, 649, 1711
MalI	GATC	6 cut(s)	350, 533, 1374, 1488, 1560, 1758
MboI	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
MboII	GAAGA	9 cut(s)	325, 457, 558, 761, 835, 1194, 1199, 1429, 1568
MflI	RGATCY	2 cut(s)	1558, 1756
MhlI	GDGCHC	3 cut(s)	245, 617, 639
MlsI	TGGCCA	2 cut(s)	809, 1452
MluNI	TGGCCA	2 cut(s)	809, 1452
MlyI	GAGTC	3 cut(s)	681, 1358, 1468
MmeI	TCCRAC	6 cut(s)	354, 724, 1141, 1582, 1710, 1992
Mox20I	TGGCCA	2 cut(s)	809, 1452
MscI	TGGCCA	2 cut(s)	809, 1452
MseI	TTAA	4 cut(s)	152, 363, 393, 480
MslI	CAYNNNNRTG	3 cut(s)	872, 1046, 1403
Msp20I	TGGCCA	2 cut(s)	809, 1452
MspA1I	CMGCKG	3 cut(s)	1036, 1625, 1670
MspI	CCGG	9 cut(s)	245, 368, 419, 669, 785, 792, 1169, 1490, 1760
MvaI	CCWGG	9 cut(s)	53, 280, 408, 579, 944, 1266, 1479, 1551, 1744
MvnI	CGCG	3 cut(s)	347, 1516, 1530
MwoI	GCNNNNNNNGC	9 cut(s)	412, 496, 746, 827, 1286, 1316, 1463, 1527, 1792
NciI	CCSGG	2 cut(s)	245, 786
NdeI	CATATG	1 cut(s)	1870
NdeII	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
NlaIII	CATG	8 cut(s)	108, 1258, 1300, 1445, 1487, 1542, 1813, 1892
NmeAIII	GCCGAG	1 cut(s)	379
NmuCI	GTSAC	4 cut(s)	3, 107, 649, 1711
NruI	TCGCGA	1 cut(s)	347
NspI	RCATGY	2 cut(s)	1813, 1892
PagI	TCATGA	1 cut(s)	1296
PaqCI	CACCTGC	2 cut(s)	16, 812
PasI	CCCWGGG	1 cut(s)	1743
PciSI	GCTCTTC	1 cut(s)	1412
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PfeI	GAWTC	8 cut(s)	397, 993, 1030, 1115, 1140, 1269, 1510, 1948
PfoI	TCCNGGA	1 cut(s)	1264
Ple19I	CGATCG	1 cut(s)	351
PleI	GAGTC	3 cut(s)	680, 1358, 1468
PpsI	GAGTC	3 cut(s)	680, 1358, 1468
PpuMI	RGGWCCY	1 cut(s)	194
Psp1406I	AACGTT	1 cut(s)	1718
Psp5II	RGGWCCY	1 cut(s)	194
Psp6I	CCWGG	9 cut(s)	51, 278, 406, 577, 942, 1264, 1477, 1549, 1742
PspGI	CCWGG	9 cut(s)	51, 278, 406, 577, 942, 1264, 1477, 1549, 1742
PspPI	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
PspPPI	RGGWCCY	1 cut(s)	194
PstI	CTGCAG	2 cut(s)	193, 742
PsuI	RGATCY	2 cut(s)	1558, 1756
PvuI	CGATCG	1 cut(s)	351
PvuII	CAGCTG	2 cut(s)	1036, 1625
RgaI	GCGATCGC	1 cut(s)	351
RruI	TCGCGA	1 cut(s)	347
RsaI	GTAC	1 cut(s)	837
RsaNI	GTAC	1 cut(s)	836
RseI	CAYNNNNRTG	3 cut(s)	872, 1046, 1403
SalI	GTCGAC	1 cut(s)	253
SapI	GCTCTTC	1 cut(s)	1412
SaqAI	TTAA	4 cut(s)	152, 363, 393, 480
Sau3AI	GATC	6 cut(s)	348, 531, 1372, 1486, 1558, 1756
Sau96I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
SchI	GAGTC	3 cut(s)	681, 1358, 1468
SduI	GDGCHC	3 cut(s)	245, 617, 639
SfaAI	GCGATCGC	1 cut(s)	351
SfaNI	GCATC	2 cut(s)	955, 1782
SfcI	CTRYAG	2 cut(s)	189, 738
SgfI	GCGATCGC	1 cut(s)	351
SinI	GGWCC	4 cut(s)	194, 298, 789, 1739
SmiMI	CAYNNNNRTG	3 cut(s)	872, 1046, 1403
SspMI	CTAG	4 cut(s)	897, 1593, 1610, 2047
StyI	CCWWGG	1 cut(s)	810
TaaI	ACNGT	2 cut(s)	343, 1070
TaiI	ACGT	3 cut(s)	453, 576, 1721
TaqI	TCGA	8 cut(s)	254, 260, 675, 1143, 1359, 1367, 1375, 1914
TauI	GCSGC	3 cut(s)	784, 1002, 1091
TfiI	GAWTC	8 cut(s)	397, 993, 1030, 1115, 1140, 1269, 1510, 1948
Tru1I	TTAA	4 cut(s)	152, 363, 393, 480
Tru9I	TTAA	4 cut(s)	152, 363, 393, 480
TscAI	CASTG	9 cut(s)	171, 501, 807, 1048, 1075, 1279, 1476, 1851, 1975
TseFI	GTSAC	4 cut(s)	3, 107, 649, 1711
TseI	GCWGC	8 cut(s)	188, 248, 461, 1036, 1209, 1307, 1622, 1667
Tsp45I	GTSAC	4 cut(s)	3, 107, 649, 1711
TspDTI	ATGAA	9 cut(s)	693, 856, 940, 1313, 1317, 1364, 1458, 1534, 1977
TspGWI	ACGGA	2 cut(s)	927, 1867
TspRI	CASTG	9 cut(s)	171, 501, 807, 1048, 1075, 1279, 1476, 1851, 1975
VpaK11BI	GGWCC	4 cut(s)	194, 298, 789, 1739
XapI	RAATTY	9 cut(s)	154, 514, 623, 710, 753, 931, 1107, 1964, 1985
XceI	RCATGY	2 cut(s)	1813, 1892
XcmI	CCANNNNNNNNNTGG	1 cut(s)	628
XmiI	GTMKAC	1 cut(s)	254
XspI	CTAG	4 cut(s)	897, 1593, 1610, 2047

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.