pycom11g03670

Phosphatidylinositol phosphatidylcholine transfer protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2849202 .. 2852833
3632 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g03670.9

Sequence Viewer

Length: 1836 bp
ATGTCAGGCCTTGAAGGTTTTGGAGCTCTTGATGAAATCCGAGAGAGAAGATCAGATTTTGAGAATTCTGAAGAGGAGAGACGACGCTCAAGAATTTGCAACCTCAAGAAGAAGGCGATAAATGCTTCAAGTAAGTTTACCCATTCTCTTAAAAAAAGAGGAAAAAGGAAAATTGATTACCGGGTTCCAGCAGTTTCCATAGAAGATGTACGGGATGCGAAAGAGGAGAGTGTTGTCCAAGAGTTTCGTCAAAGACTCCTTGACATGGACTTGTTGCCAGCAAGGCATGATGACTACCATACTTTGTTGAGATTTTTGAAAGCTAGAGACCTTAACATTGAAAAAGCACTCCAGTTATGGGAAGAAATGCTTAAATGGAGAAAAGAATTTGGAACAGACACCATTTTGGAGGATTTTGAATTTGAAGAGCTTGATGAAGTATTGCAATATTACCCTCAAGGATACCATGGGGTTGATAAAGAAGGCAGACCCGTTTACATTGAGAGACTGGGAAAAGCTCATCCAAGTAGGTTAATGCAAATCACCAGTATAGAGCGATACTTAAAGTACCATGTCCAAGAGTTTGAGAGAGCTCTGCAGGAGAAATTCCCTGCTTGTTCAATTGCGGCAAAGAGGCAGATATGTTCAACAACAACTATACTGGATGTACAAGGCTTGGGCATGAAAAATTTCACTAGAACTGCTGCAAATCTCTTGTCTGCCATGTCAAAGATAGACACCAATTACTACCCCGAGACACTACACCGAATGTACATTGTCAATGCTGGTCCTGGATTTAAGAAGATGCTTTGGCCAGCTGCACAGAAATTTCTTGATGTAAAGACTATTGCAAAGATACAGGTTTTGGATCCCAAATCCTTGTCTAAACTACTGGAAGTCATTGATTCAAGTCAGTTACCAGACTTCCTAGGCGGATCATGTACATGTTCAGCTGAAGGAGGCTGCCTTAGGTCTAATAAAGGTCCATGGAATGACATCGAGATAATGAAGCTTCTGCATGCCGCCGAAGCAACATTTGTAAGGCAAATTTCTAGAGTGTCTGGTGATCAGGAGAAATTTGACTCATATATTCAAATATATCCACTGAAGGGTAGAACAAGCGATACATCAGTTGGAGAATCAGGATCGGATATTGACGATCCTTGTTCTTCACTAGGACAAAGGAGTTCTGCATTTCCTCCTTTGGATGCAGTTGATGAAGAAGCATCAGATCCAAATGCTTACTACAGCTGTGATGATCTTCCTCTGGTTGAGAAAGCCGGAACAAGTGTTCAAGGAGTACGATGTCATCAGGATCATAATGTTTCTCTTGAAGCAACATCAAATTCCGAAGGTAGTTCAGTTAACCTTAGGTTTGACGCAACTAAGGACAAAATTGAGAAGACGGACTTCACTCGTACGGCAAAAAAGCTGGTATCTTTCCTGGTCAGACTAATACCATTTTCTCATATTCTACAATTTGAATTTTGGAGAAAGCAGAACAACATTTACCCATCAAATTTGGTGGAAAGCAACACAAATAGTCATTTACCATCCCCTGAAGTTGTGAGTCAAGAAGACTATGTCCAGCCATGTTTACAGCGTCTTCAGCAACTAGAAAAAGCATGTGAGGAACTTAACAACAAGCCTGCTTCGATTCCTTTAGAAAAGGAGCGAATACTGATGGACTCGTTGGAAAGGATTAAGTCTGTTGAATATGATCTCGAGCAAACGAAAAGGGTGCTGCATGCTGCAGCGGTAAAGCAACTAGAGATTGCTAGGTTGTTGGAGAATCTACAGGAATCTAAATTTCATCGAAAGAGACCGTTTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

612

Amino Acids

69.98

Weight (kDa)

6.33

Isoelectric Point (pI)

59.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 626, 933, 1023, 1757
AclWI GGATC 7 cut(s) 863, 876, 943, 1153, 1154, 1226, 1323
AcoI YGGCCR 1 cut(s) 812
AcuI CTGAAG 5 cut(s) 90, 975, 1127, 1581, 1592
AfaI GTAC 7 cut(s) 210, 569, 669, 773, 943, 1302, 1420
AfiI CCNNNNNNNGG 3 cut(s) 265, 358, 1109
AflIII ACRYGT 1 cut(s) 944
AjnI CCWGG 2 cut(s) 790, 1443
AloI GAACNNNNNNTCC 2 cut(s) 1275, 1307
Alw21I GWGCWC 2 cut(s) 28, 595
Alw26I GTCTC 5 cut(s) 73, 321, 499, 749, 1816
AlwI GGATC 7 cut(s) 863, 876, 943, 1153, 1154, 1226, 1323
Ama87I CYCGRG 2 cut(s) 752, 1724
AoxI GGCC 2 cut(s) 7, 812
ApeKI GCWGC 6 cut(s) 704, 818, 963, 1744, 1751, 1754
ArsI GACNNNNNNTTYG 2 cut(s) 701, 733
Asp700I GAANNNNTTC 1 cut(s) 689
AspA2I CCTAGG 1 cut(s) 928
AspS9I GGNCC 2 cut(s) 788, 983
AsuC2I CCSGG 1 cut(s) 182
AsuHPI GGTGA 2 cut(s) 535, 1076
AvaI CYCGRG 2 cut(s) 752, 1724
AvaII GGWCC 2 cut(s) 788, 983
AvrII CCTAGG 1 cut(s) 928
AxyI CCTNAGG 2 cut(s) 968, 1370
BaeI ACNNNNGTAYC 2 cut(s) 1116, 1149
BalI TGGCCA 1 cut(s) 814
BamHI GGATCC 1 cut(s) 868
BanII GRGCYC 2 cut(s) 28, 595
BbsI GAAGAC 3 cut(s) 1409, 1584, 1598
Bbv12I GWGCWC 2 cut(s) 28, 595
BbvI GCAGC 6 cut(s) 691, 805, 950, 1731, 1738, 1766
BccI CCATC 3 cut(s) 1522, 1561, 1678
BceAI ACGGC 1 cut(s) 1437
BcgI CGANNNNNNTGC 2 cut(s) 1723, 1757
BciT130I CCWGG 2 cut(s) 792, 1445
BciVI GTATCC 1 cut(s) 455
BclI TGATCA 1 cut(s) 1066
BcnI CCSGG 1 cut(s) 182
BcoDI GTCTC 5 cut(s) 73, 321, 499, 749, 1816
BfaI CTAG 8 cut(s) 324, 696, 929, 1053, 1175, 1616, 1769, 1779
BfmI CTRYAG 4 cut(s) 596, 1246, 1752, 1796
BfuI GTATCC 1 cut(s) 455
BglI GCCNNNNNGGC 1 cut(s) 283
BisI GCNGC 8 cut(s) 627, 705, 819, 964, 1023, 1745, 1752, 1755
BlnI CCTAGG 1 cut(s) 928
BlsI GCNGC 8 cut(s) 628, 706, 820, 965, 1024, 1746, 1753, 1756
Bme1390I CCNGG 3 cut(s) 182, 792, 1445
Bme18I GGWCC 2 cut(s) 788, 983
BmeT110I CYCGRG 2 cut(s) 752, 1724
BmgT120I GGNCC 2 cut(s) 788, 983
BmiI GGNNCC 2 cut(s) 186, 870
BmrFI CCNGG 3 cut(s) 182, 792, 1445
BmrI ACTGGG 1 cut(s) 518
BmsI GCATC 4 cut(s) 205, 795, 1198, 1235
BmuI ACTGGG 1 cut(s) 518
BpiI GAAGAC 3 cut(s) 1409, 1584, 1598
BpmI CTGGAG 1 cut(s) 335
BpuEI CTTGAG 3 cut(s) 73, 89, 441
BpuMI CCSGG 1 cut(s) 182
BsaI GGTCTC 2 cut(s) 321, 1816
BsaJI CCNNGG 3 cut(s) 466, 928, 986
Bsc4I CCNNNNNNNGG 3 cut(s) 265, 358, 1109
Bse1I ACTGG 5 cut(s) 352, 513, 546, 666, 897
Bse21I CCTNAGG 2 cut(s) 968, 1370
BseBI CCWGG 2 cut(s) 792, 1445
BseDI CCNNGG 3 cut(s) 466, 928, 986
BseGI GGATG 5 cut(s) 220, 520, 670, 1213, 1553
BseLI CCNNNNNNNGG 3 cut(s) 265, 358, 1109
BseNI ACTGG 5 cut(s) 352, 513, 546, 666, 897
BseRI GAGGAG 2 cut(s) 89, 239
BseXI GCAGC 6 cut(s) 691, 805, 950, 1731, 1738, 1766
BsgI GTGCAG 1 cut(s) 804
BshFI GGCC 2 cut(s) 9, 814
BsiHKAI GWGCWC 2 cut(s) 28, 595
BsiHKCI CYCGRG 2 cut(s) 752, 1724
BsiSI CCGG 2 cut(s) 181, 1281
BsiWI CGTACG 1 cut(s) 1418
BslI CCNNNNNNNGG 3 cut(s) 265, 358, 1109
BsmAI GTCTC 5 cut(s) 73, 321, 499, 749, 1816
BsmBI CGTCTC 1 cut(s) 73
BsnI GGCC 2 cut(s) 9, 814
Bso31I GGTCTC 2 cut(s) 321, 1816
BsoBI CYCGRG 2 cut(s) 752, 1724
Bsp1286I GDGCHC 2 cut(s) 28, 595
Bsp1407I TGTACA 3 cut(s) 667, 771, 941
Bsp19I CCATGG 2 cut(s) 466, 986
BspACI CCGC 4 cut(s) 626, 933, 1023, 1757
BspANI GGCC 2 cut(s) 9, 814
BspLI GGNNCC 2 cut(s) 186, 870
BspMAI CTGCAG 2 cut(s) 600, 1756
BspPI GGATC 7 cut(s) 863, 876, 943, 1153, 1154, 1226, 1323
BspQI GCTCTTC 1 cut(s) 420
BspTNI GGTCTC 2 cut(s) 321, 1816
BsrGI TGTACA 3 cut(s) 667, 771, 941
BsrI ACTGG 5 cut(s) 352, 513, 546, 666, 897
BssECI CCNNGG 3 cut(s) 466, 928, 986
BssT1I CCWWGG 3 cut(s) 466, 928, 986
Bst2UI CCWGG 2 cut(s) 792, 1445
Bst4CI ACNGT 1 cut(s) 1827
Bst6I CTCTTC 2 cut(s) 66, 420
BstAUI TGTACA 3 cut(s) 667, 771, 941
BstC8I GCNNGC 5 cut(s) 279, 816, 1020, 1650, 1749
BstDEI CTNAG 3 cut(s) 968, 1370, 1386
BstDSI CCRYGG 2 cut(s) 466, 986
BstF5I GGATG 5 cut(s) 220, 520, 670, 1213, 1553
BstMAI GTCTC 5 cut(s) 73, 321, 499, 749, 1816
BstMWI GCNNNNNNNGC 4 cut(s) 122, 283, 1028, 1609
BstNI CCWGG 2 cut(s) 792, 1445
BstNSI RCATGY 4 cut(s) 948, 1022, 1629, 1751
BstSCI CCNGG 3 cut(s) 180, 790, 1443
BstSFI CTRYAG 4 cut(s) 596, 1246, 1752, 1796
BstV1I GCAGC 6 cut(s) 691, 805, 950, 1731, 1738, 1766
BstV2I GAAGAC 3 cut(s) 1409, 1584, 1598
BstX2I RGATCY 2 cut(s) 868, 1231
BstYI RGATCY 2 cut(s) 868, 1231
Bsu36I CCTNAGG 2 cut(s) 968, 1370
BsuI GTATCC 1 cut(s) 455
BsuRI GGCC 2 cut(s) 9, 814
BtgI CCRYGG 2 cut(s) 466, 986
BtsCI GGATG 5 cut(s) 220, 520, 670, 1213, 1553
BtsIMutI CAGTG 1 cut(s) 1103
Cac8I GCNNGC 5 cut(s) 279, 816, 1020, 1650, 1749
Cfr13I GGNCC 2 cut(s) 788, 983
CseI GACGC 3 cut(s) 93, 1388, 1592
Csp6I GTAC 7 cut(s) 209, 568, 668, 772, 942, 1301, 1419
CspCI CAANNNNNGTGG 2 cut(s) 1506, 1541
CviQI GTAC 7 cut(s) 209, 568, 668, 772, 942, 1301, 1419
DdeI CTNAG 3 cut(s) 968, 1370, 1386
EaeI YGGCCR 1 cut(s) 812
Eam1104I CTCTTC 2 cut(s) 66, 420
EarI CTCTTC 2 cut(s) 66, 420
EciI GGCGGA 1 cut(s) 948
Ecl136II GAGCTC 2 cut(s) 26, 593
Eco130I CCWWGG 3 cut(s) 466, 928, 986
Eco147I AGGCCT 1 cut(s) 9
Eco24I GRGCYC 2 cut(s) 28, 595
Eco31I GGTCTC 2 cut(s) 321, 1816
Eco47I GGWCC 2 cut(s) 788, 983
Eco53kI GAGCTC 2 cut(s) 26, 593
Eco57I CTGAAG 5 cut(s) 90, 975, 1127, 1581, 1592
Eco81I CCTNAGG 2 cut(s) 968, 1370
Eco88I CYCGRG 2 cut(s) 752, 1724
EcoICRI GAGCTC 2 cut(s) 26, 593
EcoRI GAATTC 1 cut(s) 64
EcoRII CCWGG 2 cut(s) 790, 1443
EcoT14I CCWWGG 3 cut(s) 466, 928, 986
EcoT38I GRGCYC 2 cut(s) 28, 595
ErhI CCWWGG 3 cut(s) 466, 928, 986
Esp3I CGTCTC 1 cut(s) 73
FalI AAGNNNNNCTT 4 cut(s) 354, 386, 1394, 1426
FbaI TGATCA 1 cut(s) 1066
Fnu4HI GCNGC 8 cut(s) 627, 705, 819, 964, 1023, 1745, 1752, 1755
FokI GGATG 5 cut(s) 227, 507, 677, 1220, 1540
FriOI GRGCYC 2 cut(s) 28, 595
Fsp4HI GCNGC 8 cut(s) 627, 705, 819, 964, 1023, 1745, 1752, 1755
FspBI CTAG 8 cut(s) 324, 696, 929, 1053, 1175, 1616, 1769, 1779
GluI GCNGC 8 cut(s) 627, 705, 819, 964, 1023, 1745, 1752, 1755
GsuI CTGGAG 1 cut(s) 335
HaeIII GGCC 2 cut(s) 9, 814
HapII CCGG 2 cut(s) 181, 1281
HgaI GACGC 3 cut(s) 93, 1388, 1592
HincII GTYRAC 1 cut(s) 1366
HindII GTYRAC 1 cut(s) 1366
HindIII AAGCTT 1 cut(s) 1010
HinfI GANTC 9 cut(s) 255, 905, 1082, 1139, 1570, 1657, 1688, 1792, 1802
HpaI GTTAAC 1 cut(s) 1366
HpaII CCGG 2 cut(s) 181, 1281
HphI GGTGA 2 cut(s) 535, 1076
Hpy166II GTNNAC 4 cut(s) 138, 496, 1366, 1598
Hpy188I TCNGA 7 cut(s) 41, 55, 70, 1150, 1231, 1351, 1451
Hpy8I GTNNAC 4 cut(s) 138, 496, 1366, 1598
Hpy99I CGWCG 1 cut(s) 87
HpyAV CCTTC 6 cut(s) 8, 106, 476, 950, 1102, 1346
HpyCH4III ACNGT 1 cut(s) 1827
HpyF10VI GCNNNNNNNGC 4 cut(s) 122, 283, 1028, 1609
HpyF3I CTNAG 3 cut(s) 968, 1370, 1386
Ksp22I TGATCA 1 cut(s) 1066
KspAI GTTAAC 1 cut(s) 1366
LguI GCTCTTC 1 cut(s) 420
LmnI GCTCC 2 cut(s) 23, 1672
Lsp1109I GCAGC 6 cut(s) 691, 805, 950, 1731, 1738, 1766
LweI GCATC 4 cut(s) 205, 795, 1198, 1235
MaeI CTAG 8 cut(s) 324, 696, 929, 1053, 1175, 1616, 1769, 1779
MaeIII GTNAC 1 cut(s) 915
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 2 cut(s) 868, 1231
MhlI GDGCHC 2 cut(s) 28, 595
MlsI TGGCCA 1 cut(s) 814
MluNI TGGCCA 1 cut(s) 814
MlyI GAGTC 4 cut(s) 249, 1076, 1579, 1682
MmeI TCCRAC 3 cut(s) 1114, 1674, 1767
Mox20I TGGCCA 1 cut(s) 814
MroXI GAANNNNTTC 1 cut(s) 689
MscI TGGCCA 1 cut(s) 814
MseI TTAA 9 cut(s) 150, 333, 372, 533, 563, 798, 1365, 1638, 1704
MslI CAYNNNNRTG 1 cut(s) 943
Msp20I TGGCCA 1 cut(s) 814
MspA1I CMGCKG 4 cut(s) 818, 953, 1251, 1757
MspI CCGG 2 cut(s) 181, 1281
MspR9I CCNGG 3 cut(s) 182, 792, 1445
MunI CAATTG 1 cut(s) 621
MvaI CCWGG 2 cut(s) 792, 1445
MwoI GCNNNNNNNGC 4 cut(s) 122, 283, 1028, 1609
NciI CCSGG 1 cut(s) 182
NcoI CCATGG 2 cut(s) 466, 986
NlaIV GGNNCC 2 cut(s) 186, 870
NspI RCATGY 4 cut(s) 948, 1022, 1629, 1751
PaeI GCATGC 2 cut(s) 1022, 1751
PaeR7I CTCGAG 1 cut(s) 1724
PceI AGGCCT 1 cut(s) 9
PciI ACATGT 1 cut(s) 944
PciSI GCTCTTC 1 cut(s) 420
PdmI GAANNNNTTC 1 cut(s) 689
PfeI GAWTC 5 cut(s) 905, 1139, 1657, 1792, 1802
Pfl23II CGTACG 1 cut(s) 1418
PflFI GACNNNGTC 1 cut(s) 1583
PfoI TCCNGGA 1 cut(s) 790
PkrI GCNGC 8 cut(s) 628, 706, 820, 965, 1024, 1746, 1753, 1756
PleI GAGTC 4 cut(s) 249, 1076, 1578, 1682
PpsI GAGTC 4 cut(s) 249, 1076, 1578, 1682
PscI ACATGT 1 cut(s) 944
Psp124BI GAGCTC 2 cut(s) 28, 595
Psp6I CCWGG 2 cut(s) 790, 1443
PspGI CCWGG 2 cut(s) 790, 1443
PspLI CGTACG 1 cut(s) 1418
PspN4I GGNNCC 2 cut(s) 186, 870
PspPI GGNCC 2 cut(s) 788, 983
PsrI GAACNNNNNNTAC 4 cut(s) 1108, 1140, 1493, 1525
PstI CTGCAG 2 cut(s) 600, 1756
PsuI RGATCY 2 cut(s) 868, 1231
PsyI GACNNNGTC 1 cut(s) 1583
PvuII CAGCTG 3 cut(s) 818, 953, 1251
RsaI GTAC 7 cut(s) 210, 569, 669, 773, 943, 1302, 1420
RsaNI GTAC 7 cut(s) 209, 568, 668, 772, 942, 1301, 1419
RseI CAYNNNNRTG 1 cut(s) 943
SacI GAGCTC 2 cut(s) 28, 595
SapI GCTCTTC 1 cut(s) 420
SaqAI TTAA 9 cut(s) 150, 333, 372, 533, 563, 798, 1365, 1638, 1704
SatI GCNGC 8 cut(s) 627, 705, 819, 964, 1023, 1745, 1752, 1755
Sau96I GGNCC 2 cut(s) 788, 983
SchI GAGTC 4 cut(s) 249, 1076, 1579, 1682
ScrFI CCNGG 3 cut(s) 182, 792, 1445
SduI GDGCHC 2 cut(s) 28, 595
SfaNI GCATC 4 cut(s) 205, 795, 1198, 1235
SfcI CTRYAG 4 cut(s) 596, 1246, 1752, 1796
Sfr274I CTCGAG 1 cut(s) 1724
SinI GGWCC 2 cut(s) 788, 983
SlaI CTCGAG 1 cut(s) 1724
SmiMI CAYNNNNRTG 1 cut(s) 943
SmlI CTYRAG 4 cut(s) 88, 104, 456, 1724
SmoI CTYRAG 4 cut(s) 88, 104, 456, 1724
SphI GCATGC 2 cut(s) 1022, 1751
SseBI AGGCCT 1 cut(s) 9
SsiI CCGC 4 cut(s) 626, 933, 1023, 1757
SspI AATATT 1 cut(s) 449
SspMI CTAG 8 cut(s) 324, 696, 929, 1053, 1175, 1616, 1769, 1779
SstI GAGCTC 2 cut(s) 28, 595
StuI AGGCCT 1 cut(s) 9
StyD4I CCNGG 3 cut(s) 180, 790, 1443
StyI CCWWGG 3 cut(s) 466, 928, 986
TaaI ACNGT 1 cut(s) 1827
TaqI TCGA 4 cut(s) 999, 1655, 1725, 1816
TatI WGTACW 3 cut(s) 667, 771, 941
TauI GCSGC 2 cut(s) 629, 1025
TfiI GAWTC 5 cut(s) 905, 1139, 1657, 1792, 1802
Tru1I TTAA 9 cut(s) 150, 333, 372, 533, 563, 798, 1365, 1638, 1704
Tru9I TTAA 9 cut(s) 150, 333, 372, 533, 563, 798, 1365, 1638, 1704
TscAI CASTG 1 cut(s) 1110
TseI GCWGC 6 cut(s) 704, 818, 963, 1744, 1751, 1754
TspDTI ATGAA 6 cut(s) 48, 450, 698, 1022, 1233, 1802
TspGWI ACGGA 1 cut(s) 1421
TspRI CASTG 1 cut(s) 1110
Tth111I GACNNNGTC 1 cut(s) 1583
VpaK11BI GGWCC 2 cut(s) 788, 983
XbaI TCTAGA 1 cut(s) 1052
XceI RCATGY 4 cut(s) 948, 1022, 1629, 1751
XhoI CTCGAG 1 cut(s) 1724
XmaJI CCTAGG 1 cut(s) 928
XmnI GAANNNNTTC 1 cut(s) 689
XspI CTAG 8 cut(s) 324, 696, 929, 1053, 1175, 1616, 1769, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.