CLAVATA3 ESR (CLE)-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59305 AT5G59305 |
| fragaria_vesca | FvH4_3g35710 |
| malus_domestica | MD11G1111900.v1.1 |
| prunus_persica | Prupe.6G080300_v2.0.a1 Prupe.6G080300_v2.0.a1 |
| pyrus_communis | pycom11g09250 |
| rosa_chinensis | RchiOBHm_Chr5g0063861 |
| rosa_laevigata | RLG00000035686 |
| rosa_multiflora | Rmu_sc0000552.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00016920 |
| rosa_samantha | Rh5AG419200 Rh5CG458300 Rh5DG448300 |
| rosa_wichuraiana | Rw5G039390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 149 |
| AfaI | GTAC | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 134, 250 |
| AgsI | TTSAA | 2 cut(s) | 86, 95 |
| AluBI | AGCT | 3 cut(s) | 53, 89, 112 |
| AluI | AGCT | 3 cut(s) | 53, 89, 112 |
| ApeKI | GCWGC | 1 cut(s) | 50 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 99 |
| AsuC2I | CCSGG | 1 cut(s) | 129 |
| BbvI | GCAGC | 1 cut(s) | 62 |
| BccI | CCATC | 2 cut(s) | 220, 256 |
| BcnI | CCSGG | 1 cut(s) | 129 |
| BfaI | CTAG | 1 cut(s) | 177 |
| BisI | GCNGC | 1 cut(s) | 51 |
| BlsI | GCNGC | 1 cut(s) | 52 |
| Bme1390I | CCNGG | 1 cut(s) | 129 |
| BmiI | GGNNCC | 1 cut(s) | 41 |
| BmrFI | CCNGG | 1 cut(s) | 129 |
| BmrI | ACTGGG | 1 cut(s) | 221 |
| BmuI | ACTGGG | 1 cut(s) | 221 |
| Bpu10I | CCTNAGC | 1 cut(s) | 133 |
| BpuMI | CCSGG | 1 cut(s) | 129 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 134, 250 |
| Bse1I | ACTGG | 1 cut(s) | 227 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 134, 250 |
| BseMII | CTCAG | 1 cut(s) | 147 |
| BseNI | ACTGG | 1 cut(s) | 227 |
| BseRI | GAGGAG | 1 cut(s) | 17 |
| BseXI | GCAGC | 1 cut(s) | 62 |
| BsgI | GTGCAG | 1 cut(s) | 105 |
| BsiSI | CCGG | 1 cut(s) | 129 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 134, 250 |
| BspACI | CCGC | 1 cut(s) | 149 |
| BspCNI | CTCAG | 1 cut(s) | 146 |
| BspLI | GGNNCC | 1 cut(s) | 41 |
| BsrI | ACTGG | 1 cut(s) | 227 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 1 cut(s) | 133 |
| BstSCI | CCNGG | 1 cut(s) | 127 |
| BstV1I | GCAGC | 1 cut(s) | 62 |
| BtgZI | GCGATG | 1 cut(s) | 224 |
| BtsIMutI | CAGTG | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| Csp6I | GTAC | 1 cut(s) | 106 |
| CviAII | CATG | 1 cut(s) | 80 |
| CviJI | RGCY | 6 cut(s) | 40, 53, 89, 112, 127, 132 |
| CviKI_1 | RGCY | 6 cut(s) | 40, 53, 89, 112, 127, 132 |
| CviQI | GTAC | 1 cut(s) | 106 |
| DdeI | CTNAG | 1 cut(s) | 133 |
| FaeI | CATG | 1 cut(s) | 83 |
| FaiI | YATR | 2 cut(s) | 81, 204 |
| FatI | CATG | 1 cut(s) | 79 |
| FauI | CCCGC | 1 cut(s) | 142 |
| Fnu4HI | GCNGC | 1 cut(s) | 51 |
| Fsp4HI | GCNGC | 1 cut(s) | 51 |
| FspBI | CTAG | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 51 |
| HapII | CCGG | 1 cut(s) | 129 |
| Hin1II | CATG | 1 cut(s) | 83 |
| HinfI | GANTC | 3 cut(s) | 95, 198, 235 |
| HpaII | CCGG | 1 cut(s) | 129 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 2 cut(s) | 156, 216 |
| HpyAV | CCTTC | 1 cut(s) | 186 |
| HpyCH4V | TGCA | 2 cut(s) | 50, 122 |
| HpyF3I | CTNAG | 1 cut(s) | 133 |
| Hsp92II | CATG | 1 cut(s) | 83 |
| LmnI | GCTCC | 2 cut(s) | 45, 253 |
| LpnPI | CCDG | 6 cut(s) | 56, 120, 126, 142, 175, 240 |
| Lsp1109I | GCAGC | 1 cut(s) | 62 |
| MaeI | CTAG | 1 cut(s) | 177 |
| MlyI | GAGTC | 1 cut(s) | 207 |
| MnlI | CCTC | 1 cut(s) | 38 |
| MroXI | GAANNNNTTC | 1 cut(s) | 99 |
| MspI | CCGG | 1 cut(s) | 129 |
| MspR9I | CCNGG | 1 cut(s) | 129 |
| NciI | CCSGG | 1 cut(s) | 129 |
| NlaIII | CATG | 1 cut(s) | 83 |
| NlaIV | GGNNCC | 1 cut(s) | 41 |
| PdmI | GAANNNNTTC | 1 cut(s) | 99 |
| PfeI | GAWTC | 2 cut(s) | 95, 235 |
| PkrI | GCNGC | 1 cut(s) | 52 |
| PleI | GAGTC | 1 cut(s) | 206 |
| PpsI | GAGTC | 1 cut(s) | 206 |
| PspN4I | GGNNCC | 1 cut(s) | 41 |
| RsaI | GTAC | 1 cut(s) | 107 |
| RsaNI | GTAC | 1 cut(s) | 106 |
| SatI | GCNGC | 1 cut(s) | 51 |
| SchI | GAGTC | 1 cut(s) | 207 |
| ScrFI | CCNGG | 1 cut(s) | 129 |
| SetI | ASST | 5 cut(s) | 55, 91, 114, 139, 186 |
| SsiI | CCGC | 1 cut(s) | 149 |
| SspI | AATATT | 1 cut(s) | 76 |
| SspMI | CTAG | 1 cut(s) | 177 |
| StyD4I | CCNGG | 1 cut(s) | 127 |
| TaqII | GACCGA | 1 cut(s) | 235 |
| TatI | WGTACW | 1 cut(s) | 105 |
| TfiI | GAWTC | 2 cut(s) | 95, 235 |
| TscAI | CASTG | 1 cut(s) | 193 |
| TseI | GCWGC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 2 cut(s) | 11, 68 |
| TspRI | CASTG | 1 cut(s) | 193 |
| XmnI | GAANNNNTTC | 1 cut(s) | 99 |
| XspI | CTAG | 1 cut(s) | 177 |