pycom11g26060

Ankyrin repeat domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0015548
Physical Location & Seq
Forward (+)
28716913 .. 28718514
1602 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1467 bp
ATGACATTTCGATTGTATGTAAAAGTTTGGGTCTCAAACTTCAAAGTTCCATATTCAAAAAAGCCAACAACCACTCTTTCGTTGTCAAATTACACACTCAAAAAAATAATAATATTACAACTTTTGCATGAAAAGGACATAAGGGAGGAAGAAAAAGATCAAACAACCAAACCAATCACCATTTTCATCAGATATCCAAAACCCCAACACCGAATTTTCCCGAGAAAATCACTTTCCCGGAAAATTTCCAGTTTCAGTTTCGCCATGGACAGGCTGGTGAAGCCAGACGTGAAGGAAGTGGAGCTCAACTTCAAGCGAGACCAAAAGTGCAGCACAACCTTCCGGCTGAGCAACCTCATGCATACCATGTCCGTCGCCGTCTCTCTCACCACCACTAACCCATCTCTCTTTTCCTTCACTCAACCCCTCTCCATAATCCCGCCGCTCTCTTCCTCCTCCTACACCCTCCTCCTCTCTCAGCCGTCTGATGAGCCCCCGCTCTCCCTCACAACCAACCCTCATGACGTCATCAACGTCCAGGCCTCCATGCTCCCCACAGGGAAAGCCGACCAGGAGCATCTCCGCCGCCTGTTCCGCCGGCCCGGGCCTCACGTTTTCCGGGACGCTACTATACCCATCTCGTTTGTGGGTCCGCACGTGGTTGAATTTCTGATTTCTCAGCTCACCCGGATCTCGGAATTCGATTCGTTTTTTAACAAGGCGATTTCTGGGTGCTCTGGGGCTGAGCTCACGGCGCTGCTCGGTCCCGCCATAGCTTCCGGGAATGCTAATTTGGTCTCTGACCTGATTGACGCCGGTGCAGTTGTGAATCAGAGAGATTCGGATTCCGGGTCTTTGCTATCTCTCGGTGTTCGGTCCGGAAACATTGATATTGTGAAGGTTCTGATCGCCTCCGGCTGTGAAATTGGTAATTCAGCAGACGAGGTCTTGCACGACGCGGCGGCGATGAACCGGGTCGATTTGTTTGAGATTTTGTACAAGACTCTTGATGGAATTGACGTGAATTTGGTTGACAAGGAAGGTCGAACTCCGATTCATATCGCGGCCGCTCACGGCCACGTCGAGATGTTGAAGTTTTGTATTTCTGTCGGAGGCAATGCGGAGGTTACGGACTCTAGAGGTCGGAGTCCGCTTCACTGGGCGGCGGAGAAGGGGCATTTGGGGGCCGCAAAGTGTCTGTTAAATTGCTCCAATGTGAAATACGCCGTCACCAAAGACGGAAGGACGGCTTTCGATCTCGCCGCTGCAAACGGGCACACGAGCCTGCTGGGTTTCCTGCGATACGACGACGTCCTGAACCGGGCGGCAAGTTTGGACGACGCTCACGGGATAAAGAGTTGCCTTGCGAAAGGGGCAGAGGTGAACGGGAGGGACCAGAATGGCTGGACCCCTTTGCACAGGGCGGCGTTCAAGGGGAGCGATCGAGTGTGTGAAGGTGTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_4

Protein Analysis

489

Amino Acids

53.43

Weight (kDa)

8.77

Isoelectric Point (pI)

25.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 257 - 345 1.1e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 317 - 403 1.2e-16 Ankyrin repeats (3 copies)
Ank_4 PF13637 317 - 366 3.9e-12 Ankyrin repeats (many copies)
Ank_5 PF13857 339 - 386 3.9e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 371 - 434 4.1e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 385 - 433 7.8e-06 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015548)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24420
malus_domestica MD03G1273500.v1.1 MD11G1296100.v1.1
prunus_persica Prupe.8G249900_v2.0.a1
pyrus_communis pycom03g21790 pycom11g26060
rosa_chinensis RchiOBHm_Chr6g0292251
rosa_laevigata RLG00000012048
rosa_multiflora Rmu_sc0002993.1_g000015
rosa_roxburghii Rroxscaffold_7G00175280
rosa_rugosa Rorug06G0224900
rosa_samantha Rh6AG338200 Rh6BG345500 Rh6CG352400 Rh6DG338400
rosa_wichuraiana Rw6G029430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 528, 1314
AccBSI CCGCTC 3 cut(s) 445, 499, 1070
AccII CGCG 2 cut(s) 959, 1064
AccIII TCCGGA 1 cut(s) 878
AclWI GGATC 1 cut(s) 698
AcoI YGGCCR 2 cut(s) 1065, 1075
AcsI RAATTY 5 cut(s) 213, 243, 665, 698, 1024
AcvI CACGTG 1 cut(s) 658
AcyI GRCGYC 3 cut(s) 525, 813, 1311
AfaI GTAC 1 cut(s) 998
AfiI CCNNNNNNNGG 3 cut(s) 270, 694, 1321
AgsI TTSAA 6 cut(s) 43, 57, 313, 665, 1093, 1432
AjiI CACGTC 3 cut(s) 289, 1021, 1081
AjnI CCWGG 2 cut(s) 537, 570
AjuI GAANNNNNNNTTGG 4 cut(s) 776, 808, 1163, 1195
AluBI AGCT 4 cut(s) 304, 682, 748, 776
AluI AGCT 4 cut(s) 304, 682, 748, 776
Alw21I GWGCWC 3 cut(s) 306, 737, 750
Alw26I GTCTC 4 cut(s) 37, 312, 385, 802
AlwI GGATC 1 cut(s) 698
Ama87I CYCGRG 2 cut(s) 220, 602
Aor13HI TCCGGA 1 cut(s) 878
AoxI GGCC 6 cut(s) 540, 599, 605, 1065, 1075, 1185
ApeKI GCWGC 3 cut(s) 330, 757, 1265
ApoI RAATTY 5 cut(s) 213, 243, 665, 698, 1024
AspLEI GCGC 1 cut(s) 757
AspS9I GGNCC 8 cut(s) 600, 605, 650, 764, 876, 1185, 1393, 1407
AsuC2I CCSGG 9 cut(s) 238, 603, 604, 620, 688, 781, 850, 974, 1322
AsuHPI GGTGA 6 cut(s) 169, 289, 379, 676, 1222, 1393
AvaI CYCGRG 2 cut(s) 220, 602
AvaII GGWCC 5 cut(s) 650, 764, 876, 1393, 1407
BaeGI GKGCMC 1 cut(s) 1278
BanII GRGCYC 3 cut(s) 306, 495, 750
BauI CACGAG 1 cut(s) 1279
BbrPI CACGTG 1 cut(s) 658
Bbv12I GWGCWC 3 cut(s) 306, 737, 750
BbvI GCAGC 3 cut(s) 342, 744, 1252
BccI CCATC 3 cut(s) 409, 644, 1004
BceAI ACGGC 6 cut(s) 362, 466, 768, 1090, 1211, 1263
BciT130I CCWGG 2 cut(s) 539, 572
BcnI CCSGG 9 cut(s) 238, 603, 604, 620, 688, 781, 850, 974, 1322
BcoDI GTCTC 4 cut(s) 37, 312, 385, 802
BfaI CTAG 1 cut(s) 1137
BfoI RGCGCY 1 cut(s) 758
BlpI GCTNAGC 2 cut(s) 347, 744
Bme18I GGWCC 5 cut(s) 650, 764, 876, 1393, 1407
BmeT110I CYCGRG 2 cut(s) 220, 602
BmgBI CACGTC 3 cut(s) 289, 1021, 1081
BmgT120I GGNCC 8 cut(s) 600, 605, 650, 764, 876, 1185, 1393, 1407
BmiI GGNNCC 5 cut(s) 651, 766, 1186, 1394, 1409
BmrI ACTGGG 1 cut(s) 1168
BmsI GCATC 1 cut(s) 586
BmuI ACTGGG 1 cut(s) 1168
Bpu1102I GCTNAGC 2 cut(s) 347, 744
BpuMI CCSGG 9 cut(s) 238, 603, 604, 620, 688, 781, 850, 974, 1322
BsaAI YACGTR 1 cut(s) 658
BsaBI GATNNNNATC 1 cut(s) 1058
BsaHI GRCGYC 3 cut(s) 525, 813, 1311
BsaI GGTCTC 3 cut(s) 37, 312, 802
BsaJI CCNNGG 2 cut(s) 264, 602
BsaWI WCCGGW 1 cut(s) 878
Bsc4I CCNNNNNNNGG 3 cut(s) 270, 694, 1321
Bse118I RCCGGY 2 cut(s) 597, 815
Bse1I ACTGG 2 cut(s) 249, 1163
Bse3DI GCAATG 1 cut(s) 1123
Bse8I GATNNNNATC 1 cut(s) 1058
BseAI TCCGGA 1 cut(s) 878
BseBI CCWGG 2 cut(s) 539, 572
BseDI CCNNGG 2 cut(s) 264, 602
BseJI GATNNNNATC 1 cut(s) 1058
BseLI CCNNNNNNNGG 3 cut(s) 270, 694, 1321
BseMI GCAATG 1 cut(s) 1123
BseMII CTCAG 4 cut(s) 338, 491, 692, 735
BseNI ACTGG 2 cut(s) 249, 1163
BseRI GAGGAG 3 cut(s) 445, 458, 461
BseSI GKGCMC 1 cut(s) 1278
BseX3I CGGCCG 1 cut(s) 1065
BseXI GCAGC 3 cut(s) 342, 744, 1252
BseYI CCCAGC 1 cut(s) 1288
BsgI GTGCAG 2 cut(s) 349, 840
Bsh1236I CGCG 2 cut(s) 959, 1064
Bsh1285I CGRYCG 2 cut(s) 1068, 1444
BshFI GGCC 6 cut(s) 542, 601, 607, 1067, 1077, 1187
BsiEI CGRYCG 2 cut(s) 1068, 1444
BsiHKAI GWGCWC 3 cut(s) 306, 737, 750
BsiHKCI CYCGRG 2 cut(s) 220, 602
BslFI GGGAC 3 cut(s) 635, 750, 1406
BslI CCNNNNNNNGG 3 cut(s) 270, 694, 1321
BsmAI GTCTC 4 cut(s) 37, 312, 385, 802
BsmBI CGTCTC 1 cut(s) 385
BsmFI GGGAC 3 cut(s) 635, 750, 1406
BsmI GAATGC 1 cut(s) 790
BsnI GGCC 6 cut(s) 542, 601, 607, 1067, 1077, 1187
Bso31I GGTCTC 3 cut(s) 37, 312, 802
BsoBI CYCGRG 2 cut(s) 220, 602
Bsp1286I GDGCHC 5 cut(s) 306, 495, 737, 750, 1278
Bsp13I TCCGGA 1 cut(s) 878
Bsp1407I TGTACA 1 cut(s) 996
Bsp143I GATC 5 cut(s) 157, 690, 906, 1255, 1441
Bsp1720I GCTNAGC 2 cut(s) 347, 744
Bsp19I CCATGG 1 cut(s) 264
BspANI GGCC 6 cut(s) 542, 601, 607, 1067, 1077, 1187
BspCNI CTCAG 4 cut(s) 339, 490, 691, 736
BspEI TCCGGA 1 cut(s) 878
BspFNI CGCG 2 cut(s) 959, 1064
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 5 cut(s) 651, 766, 1186, 1394, 1409
BspPI GGATC 1 cut(s) 698
BspTNI GGTCTC 3 cut(s) 37, 312, 802
BsrBI CCGCTC 3 cut(s) 445, 499, 1070
BsrDI GCAATG 1 cut(s) 1123
BsrFI RCCGGY 2 cut(s) 597, 815
BsrGI TGTACA 1 cut(s) 996
BsrI ACTGG 2 cut(s) 249, 1163
BssAI RCCGGY 2 cut(s) 597, 815
BssECI CCNNGG 2 cut(s) 264, 602
BssMI GATC 5 cut(s) 157, 690, 906, 1255, 1441
BssNI GRCGYC 3 cut(s) 525, 813, 1311
BssSI CACGAG 1 cut(s) 1279
BssT1I CCWWGG 1 cut(s) 264
Bst2BI CACGAG 1 cut(s) 1279
Bst2UI CCWGG 2 cut(s) 539, 572
Bst6I CTCTTC 1 cut(s) 454
BstACI GRCGYC 3 cut(s) 525, 813, 1311
BstAUI TGTACA 1 cut(s) 996
BstBAI YACGTR 1 cut(s) 658
BstC8I GCNNGC 2 cut(s) 599, 1286
BstDEI CTNAG 4 cut(s) 347, 477, 678, 744
BstDSI CCRYGG 1 cut(s) 264
BstFNI CGCG 2 cut(s) 959, 1064
BstH2I RGCGCY 1 cut(s) 758
BstHHI GCGC 1 cut(s) 757
BstKTI GATC 5 cut(s) 160, 693, 909, 1258, 1444
BstMAI GTCTC 4 cut(s) 37, 312, 385, 802
BstMBI GATC 5 cut(s) 157, 690, 906, 1255, 1441
BstMCI CGRYCG 2 cut(s) 1068, 1444
BstMWI GCNNNNNNNGC 4 cut(s) 280, 594, 754, 1373
BstNI CCWGG 2 cut(s) 539, 572
BstSLI GKGCMC 1 cut(s) 1278
BstUI CGCG 2 cut(s) 959, 1064
BstV1I GCAGC 3 cut(s) 342, 744, 1252
BstX2I RGATCY 1 cut(s) 690
BstYI RGATCY 1 cut(s) 690
BstZI CGGCCG 1 cut(s) 1065
BsuRI GGCC 6 cut(s) 542, 601, 607, 1067, 1077, 1187
BtgI CCRYGG 1 cut(s) 264
BtgZI GCGATG 1 cut(s) 980
BtrI CACGTC 3 cut(s) 289, 1021, 1081
BtsIMutI CAGTG 1 cut(s) 1156
Cac8I GCNNGC 2 cut(s) 599, 1286
CciI TCATGA 1 cut(s) 520
CciNI GCGGCCGC 1 cut(s) 1065
CfoI GCGC 1 cut(s) 757
Cfr10I RCCGGY 2 cut(s) 597, 815
Cfr13I GGNCC 8 cut(s) 600, 605, 650, 764, 876, 1185, 1393, 1407
Cfr9I CCCGGG 1 cut(s) 602
CpoI CGGWCCG 1 cut(s) 876
CseI GACGC 4 cut(s) 632, 821, 965, 1349
Csp6I GTAC 1 cut(s) 997
CspI CGGWCCG 1 cut(s) 876
CviAII CATG 6 cut(s) 128, 265, 358, 367, 521, 547
CviQI GTAC 1 cut(s) 997
DdeI CTNAG 4 cut(s) 347, 477, 678, 744
DpnI GATC 5 cut(s) 159, 692, 908, 1257, 1443
DpnII GATC 5 cut(s) 157, 690, 906, 1255, 1441
EaeI YGGCCR 2 cut(s) 1065, 1075
EagI CGGCCG 1 cut(s) 1065
Eam1104I CTCTTC 1 cut(s) 454
EarI CTCTTC 1 cut(s) 454
EciI GGCGGA 3 cut(s) 572, 584, 1181
Ecl136II GAGCTC 2 cut(s) 304, 748
EclXI CGGCCG 1 cut(s) 1065
Eco130I CCWWGG 1 cut(s) 264
Eco147I AGGCCT 1 cut(s) 542
Eco24I GRGCYC 3 cut(s) 306, 495, 750
Eco31I GGTCTC 3 cut(s) 37, 312, 802
Eco32I GATATC 1 cut(s) 194
Eco47I GGWCC 5 cut(s) 650, 764, 876, 1393, 1407
Eco52I CGGCCG 1 cut(s) 1065
Eco53kI GAGCTC 2 cut(s) 304, 748
Eco72I CACGTG 1 cut(s) 658
Eco88I CYCGRG 2 cut(s) 220, 602
EcoICRI GAGCTC 2 cut(s) 304, 748
EcoRI GAATTC 1 cut(s) 698
EcoRII CCWGG 2 cut(s) 537, 570
EcoRV GATATC 1 cut(s) 194
EcoT14I CCWWGG 1 cut(s) 264
EcoT22I ATGCAT 1 cut(s) 363
EcoT38I GRGCYC 3 cut(s) 306, 495, 750
ErhI CCWWGG 1 cut(s) 264
Esp3I CGTCTC 1 cut(s) 385
FaeI CATG 6 cut(s) 131, 268, 361, 370, 524, 550
FalI AAGNNNNNCTT 2 cut(s) 1234, 1266
FaqI GGGAC 3 cut(s) 635, 750, 1406
FatI CATG 6 cut(s) 127, 264, 357, 366, 520, 546
FauI CCCGC 3 cut(s) 447, 504, 775
FriOI GRGCYC 3 cut(s) 306, 495, 750
FspBI CTAG 1 cut(s) 1137
GlaI GCGC 1 cut(s) 756
GsaI CCCAGC 1 cut(s) 1292
HaeII RGCGCY 1 cut(s) 758
HaeIII GGCC 6 cut(s) 542, 601, 607, 1067, 1077, 1187
HgaI GACGC 4 cut(s) 632, 821, 965, 1349
HhaI GCGC 1 cut(s) 757
Hin1I GRCGYC 3 cut(s) 525, 813, 1311
Hin1II CATG 6 cut(s) 131, 268, 361, 370, 524, 550
Hin6I GCGC 1 cut(s) 755
HinP1I GCGC 1 cut(s) 755
HincII GTYRAC 1 cut(s) 1033
HindII GTYRAC 1 cut(s) 1033
HinfI GANTC 8 cut(s) 704, 829, 839, 845, 1003, 1054, 1133, 1147
HphI GGTGA 6 cut(s) 169, 289, 379, 676, 1222, 1393
Hpy166II GTNNAC 2 cut(s) 1033, 1384
Hpy188III TCNNGA 7 cut(s) 220, 521, 879, 1007, 1084, 1137, 1315
Hpy8I GTNNAC 2 cut(s) 1033, 1384
Hpy99I CGWCG 6 cut(s) 377, 959, 1085, 1310, 1313, 1343
HpyAV CCTTC 8 cut(s) 286, 349, 424, 892, 1034, 1165, 1236, 1448
HpyCH4IV ACGT 8 cut(s) 288, 525, 534, 612, 657, 1020, 1080, 1311
HpyCH4V TGCA 7 cut(s) 127, 330, 361, 821, 952, 1268, 1417
HpyF10VI GCNNNNNNNGC 4 cut(s) 280, 594, 754, 1373
HpyF3I CTNAG 4 cut(s) 347, 477, 678, 744
HpySE526I ACGT 8 cut(s) 288, 525, 534, 612, 657, 1020, 1080, 1311
Hsp92I GRCGYC 3 cut(s) 525, 813, 1311
Hsp92II CATG 6 cut(s) 131, 268, 361, 370, 524, 550
HspAI GCGC 1 cut(s) 755
Kpn2I TCCGGA 1 cut(s) 878
KroI GCCGGC 1 cut(s) 597
KroNI GCCGGC 1 cut(s) 599
Kzo9I GATC 5 cut(s) 157, 690, 906, 1255, 1441
LmnI GCTCC 5 cut(s) 301, 555, 574, 1214, 1437
Lsp1109I GCAGC 3 cut(s) 342, 744, 1252
LweI GCATC 1 cut(s) 586
MaeI CTAG 1 cut(s) 1137
MaeII ACGT 8 cut(s) 288, 525, 534, 612, 657, 1020, 1080, 1311
MaeIII GTNAC 2 cut(s) 1126, 1228
MalI GATC 5 cut(s) 159, 692, 908, 1257, 1443
MbiI CCGCTC 3 cut(s) 445, 499, 1070
MboI GATC 5 cut(s) 157, 690, 906, 1255, 1441
MboII GAAGA 2 cut(s) 161, 441
MflI RGATCY 1 cut(s) 690
MhlI GDGCHC 5 cut(s) 306, 495, 737, 750, 1278
MlyI GAGTC 3 cut(s) 997, 1127, 1156
MmeI TCCRAC 2 cut(s) 1090, 1124
Mph1103I ATGCAT 1 cut(s) 363
MroI TCCGGA 1 cut(s) 878
MroNI GCCGGC 1 cut(s) 597
MseI TTAA 3 cut(s) 714, 1202, 1465
MspA1I CMGCKG 1 cut(s) 1265
Mva1269I GAATGC 1 cut(s) 790
MvaI CCWGG 2 cut(s) 539, 572
MvnI CGCG 2 cut(s) 959, 1064
MwoI GCNNNNNNNGC 4 cut(s) 280, 594, 754, 1373
NaeI GCCGGC 1 cut(s) 599
NciI CCSGG 9 cut(s) 238, 603, 604, 620, 688, 781, 850, 974, 1322
NcoI CCATGG 1 cut(s) 264
NdeII GATC 5 cut(s) 157, 690, 906, 1255, 1441
NgoMIV GCCGGC 1 cut(s) 597
NlaIII CATG 6 cut(s) 131, 268, 361, 370, 524, 550
NlaIV GGNNCC 5 cut(s) 651, 766, 1186, 1394, 1409
NmuCI GTSAC 1 cut(s) 1228
NotI GCGGCCGC 1 cut(s) 1065
NsiI ATGCAT 1 cut(s) 363
PagI TCATGA 1 cut(s) 520
PceI AGGCCT 1 cut(s) 542
PcsI WCGNNNNNNNCGW 2 cut(s) 531, 1080
PctI GAATGC 1 cut(s) 790
PdiI GCCGGC 1 cut(s) 599
PfeI GAWTC 5 cut(s) 704, 829, 839, 845, 1054
PflFI GACNNNGTC 2 cut(s) 944, 1310
PfoI TCCNGGA 3 cut(s) 236, 618, 779
Ple19I CGATCG 1 cut(s) 1444
PleI GAGTC 3 cut(s) 997, 1127, 1155
PmaCI CACGTG 1 cut(s) 658
PmlI CACGTG 1 cut(s) 658
PpsI GAGTC 3 cut(s) 997, 1127, 1155
Ppu21I YACGTR 1 cut(s) 658
Psp124BI GAGCTC 2 cut(s) 306, 750
Psp6I CCWGG 2 cut(s) 537, 570
PspCI CACGTG 1 cut(s) 658
PspFI CCCAGC 1 cut(s) 1288
PspGI CCWGG 2 cut(s) 537, 570
PspN4I GGNNCC 5 cut(s) 651, 766, 1186, 1394, 1409
PspPI GGNCC 8 cut(s) 600, 605, 650, 764, 876, 1185, 1393, 1407
PsuI RGATCY 1 cut(s) 690
PsyI GACNNNGTC 2 cut(s) 944, 1310
PvuI CGATCG 1 cut(s) 1444
RsaI GTAC 1 cut(s) 998
RsaNI GTAC 1 cut(s) 997
Rsr2I CGGWCCG 1 cut(s) 876
RsrII CGGWCCG 1 cut(s) 876
SacI GAGCTC 2 cut(s) 306, 750
SaqAI TTAA 3 cut(s) 714, 1202, 1465
Sau3AI GATC 5 cut(s) 157, 690, 906, 1255, 1441
Sau96I GGNCC 8 cut(s) 600, 605, 650, 764, 876, 1185, 1393, 1407
SchI GAGTC 3 cut(s) 997, 1127, 1156
SduI GDGCHC 5 cut(s) 306, 495, 737, 750, 1278
SfaNI GCATC 1 cut(s) 586
SgrAI CRCCGGYG 1 cut(s) 815
SinI GGWCC 5 cut(s) 650, 764, 876, 1393, 1407
SmaI CCCGGG 1 cut(s) 604
SrfI GCCCGGGC 1 cut(s) 604
SseBI AGGCCT 1 cut(s) 542
SspI AATATT 1 cut(s) 114
SspMI CTAG 1 cut(s) 1137
SstI GAGCTC 2 cut(s) 306, 750
StuI AGGCCT 1 cut(s) 542
StyI CCWWGG 1 cut(s) 264
TaiI ACGT 8 cut(s) 291, 528, 537, 615, 660, 1023, 1083, 1314
TaqI TCGA 7 cut(s) 10, 702, 978, 1045, 1083, 1254, 1444
TaqII GACCGA 2 cut(s) 752, 864
TatI WGTACW 1 cut(s) 996
TfiI GAWTC 5 cut(s) 704, 829, 839, 845, 1054
Tru1I TTAA 3 cut(s) 714, 1202, 1465
Tru9I TTAA 3 cut(s) 714, 1202, 1465
TscAI CASTG 1 cut(s) 1163
TseFI GTSAC 1 cut(s) 1228
TseI GCWGC 3 cut(s) 330, 757, 1265
Tsp45I GTSAC 1 cut(s) 1228
TspDTI ATGAA 4 cut(s) 144, 175, 983, 1046
TspGWI ACGGA 3 cut(s) 361, 1145, 1254
TspMI CCCGGG 1 cut(s) 602
TspRI CASTG 1 cut(s) 1163
Tth111I GACNNNGTC 2 cut(s) 944, 1310
VpaK11BI GGWCC 5 cut(s) 650, 764, 876, 1393, 1407
XapI RAATTY 5 cut(s) 213, 243, 665, 698, 1024
XbaI TCTAGA 1 cut(s) 1136
XcmI CCANNNNNNNNNTGG 2 cut(s) 271, 643
XmaI CCCGGG 1 cut(s) 602
XspI CTAG 1 cut(s) 1137
ZraI GACGTC 2 cut(s) 526, 1312
Zsp2I ATGCAT 1 cut(s) 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.