pycom12g09410

Protein kinase and PP2C-like domain-containing

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
11367951 .. 11375203
7253 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g09410.8

Sequence Viewer

Length: 1689 bp
ATGTATTTCTTTGAATTCTTTGAATCACCCAATTTGTCTGACAAACTACACATGGAAGAATGGACTCCGAGTATCGATCAGGTGCTTGTGATTGCTCTCCATTTAGCAAAGGCTTTGCAATACCTGCATAACCTCGGGATTGTACATAGGGATGTGAAACCGGCAAATATTCTTGTAAATCTTGACAACGATCTTTTCCCCCACTTAGCAGACTTTGGTTTGGCTGTATATAAAGAAGATCTTAAAGGAGTTTCTCTTGAGAATTGGAGGTCATCCGGCAAGCCTACTGGTGGTTTTCACAAAAAGAATATGGTTGGCACACTCATTTACATGGCACCTGAAATATTGAAGAAGGAAACTCATACAGAAAAGTCAGACGTGTACAGCTTTGGTATTTCACTCAATGAGCTTCTGACCGGTGTTGTTCCATATACTGATCTTCGTGCGGAAGCCCAGGCGCACACTGTACTGGAGATGAACTACACAGAGCAGCAACTTACGGCAGCAGTGGTGTCAGATGGATTGCGACCGGTTCTTGCTGATCCTGAGTCTGGTGTGCCACCAGCTTTGTTATCAGTGATACAGAGATGTTGGGATGCAAATTCTCAAAACAGGCCTTCTTTCGATGACATAGTTGCTGAACTTGTTATAATTTTGAAACAGAGAGAGAAAATAAAGGAGCCAGATAGTTCCTTTCACGATTCTCTTAATTCTCTTGGTAATCAGCCTATAGATGTTGGCAACAATCTTCAAGCTTATCAAGAGGGTATTAACTGGTTTACTCGGGGAGAAAATTCCATCAATAGAGCTTGTGAACCTAAGCATGGTTTGGAAAAGTGGCTTCAGGCTGCAAATGATACTTTGGCATATCATCCAGTACTTTCTTGGGGATCTTTTGCTACCTGTGGCAGAAGGGAGACGATGGAGGATACACATTTCCTTTTGCCACATGTGTGTAATGAAAGGGATATCCATGTTTTTGGTATTTTTGATGGTCATAGAGGTGCAGCAGCTGCCGAATTTTCAGCTCGAGCTTTTCCAGGATTCCTGCTAGCCATAAGTTCGATTAGCAGTCCAAGAAGTGCATTGTTCGAGGCATTCATTAAGACTGATATAGCATTTAGAGCTGAGCTGGATATTTCTCGTAAATCCAAGAGAGTTATCCAGAAGGACTGGCATCCTGGTTGCACTGCAGCTGCAGCTCTTATTGTTAGAAATAAACTTTTTGTAGCGAATGCAGGAGATTGCAGGACAATACTGTGTCGTGCTGGCCACCCCCTTGTTCTAAGCAAGGATCACGTTGCAAGCTGTCTCGAGGAAAGGGATCGGGTTATTAGTGCAGGAGGAGATGTAAGATGGCAAGTCGATAATTGGAGGGTGGGTCGTGCTGCTCTTCAGGTTACTCGTTCCATAGGTGATGATGATCTAAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAAACTATTCTCTCCCCAGAGGATGAGTATTTGGTAATGGCAAGTGATGGACTGTGGGATGTTGTGAGCAATGCGGAGGTTGTAAACATAATCAGGGACACGGTGAAAGAGCCTGGAATGTGCTCCAAAAGATTGGCGACGGAAGCCGCAGAACGTGGGAGCAAAGACAACATCACAGTCATTGTCGTCTTCCTCCGTCCTGTCTCCACAGCTGAGAGAATTTTCTAG

Protein Analysis

563

Amino Acids

62.51

Weight (kDa)

5.5

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 650
Acc36I ACCTGC 1 cut(s) 132
AccB1I GGYRCC 1 cut(s) 334
AciI CCGC 3 cut(s) 446, 1535, 1608
AclWI GGATC 4 cut(s) 536, 898, 1302, 1332
AcoI YGGCCR 1 cut(s) 1270
AcsI RAATTY 5 cut(s) 14, 601, 793, 1019, 1680
AcuI CTGAAG 2 cut(s) 827, 1379
AfaI GTAC 4 cut(s) 144, 383, 468, 879
AfiI CCNNNNNNNGG 3 cut(s) 290, 551, 824
AflIII ACRYGT 2 cut(s) 378, 949
AgeI ACCGGT 2 cut(s) 416, 529
AgsI TTSAA 5 cut(s) 14, 23, 349, 658, 752
AjiI CACGTC 1 cut(s) 379
AjnI CCWGG 4 cut(s) 453, 1039, 1180, 1573
AleI CACNNNNGTG 1 cut(s) 952
Alw21I GWGCWC 1 cut(s) 1586
Alw26I GTCTC 3 cut(s) 911, 1316, 1669
AlwI GGATC 4 cut(s) 536, 898, 1302, 1332
AlwNI CAGNNNCTG 2 cut(s) 1013, 1451
Ama87I CYCGRG 4 cut(s) 134, 783, 1029, 1313
AoxI GGCC 2 cut(s) 614, 1270
ApoI RAATTY 5 cut(s) 14, 601, 793, 1019, 1680
AsiGI ACCGGT 2 cut(s) 416, 529
Asp700I GAANNNNTTC 1 cut(s) 1467
AspLEI GCGC 1 cut(s) 460
AsuHPI GGTGA 3 cut(s) 18, 1427, 1576
AsuNHI GCTAGC 1 cut(s) 1051
AvaI CYCGRG 4 cut(s) 134, 783, 1029, 1313
BalI TGGCCA 1 cut(s) 1272
BanI GGYRCC 1 cut(s) 334
BbsI GAAGAC 1 cut(s) 1642
Bbv12I GWGCWC 1 cut(s) 1586
BccI CCATC 6 cut(s) 512, 806, 916, 986, 1350, 1502
BceAI ACGGC 1 cut(s) 516
BciT130I CCWGG 4 cut(s) 455, 1041, 1182, 1575
BciVI GTATCC 1 cut(s) 922
BcoDI GTCTC 3 cut(s) 911, 1316, 1669
BfaI CTAG 2 cut(s) 1052, 1687
BfmI CTRYAG 4 cut(s) 729, 1191, 1197, 1443
BfuAI ACCTGC 1 cut(s) 132
BfuI GTATCC 1 cut(s) 922
BglII AGATCT 1 cut(s) 238
BlpI GCTNAGC 1 cut(s) 1128
BmcAI AGTACT 1 cut(s) 879
Bme1390I CCNGG 4 cut(s) 455, 1041, 1182, 1575
BmeT110I CYCGRG 4 cut(s) 134, 783, 1029, 1313
BmgBI CACGTC 1 cut(s) 379
BmiI GGNNCC 2 cut(s) 336, 681
BmrFI CCNGG 4 cut(s) 455, 1041, 1182, 1575
BmsI GCATC 2 cut(s) 586, 1186
BmtI GCTAGC 1 cut(s) 1055
BpiI GAAGAC 1 cut(s) 1642
BpmI CTGGAG 1 cut(s) 491
Bpu10I CCTNAGC 1 cut(s) 819
Bpu1102I GCTNAGC 1 cut(s) 1128
BpuEI CTTGAG 1 cut(s) 278
Bsa29I ATCGAT 1 cut(s) 75
BsaBI GATNNNNATC 1 cut(s) 1422
BsaJI CCNNGG 2 cut(s) 133, 453
BsaWI WCCGGW 2 cut(s) 416, 529
BsaXI ACNNNNNCTCC 4 cut(s) 1335, 1365, 1366, 1396
Bsc4I CCNNNNNNNGG 3 cut(s) 290, 551, 824
Bse118I RCCGGY 3 cut(s) 160, 416, 529
Bse1I ACTGG 5 cut(s) 292, 474, 779, 875, 1178
Bse3DI GCAATG 1 cut(s) 1537
Bse8I GATNNNNATC 1 cut(s) 1422
BseBI CCWGG 4 cut(s) 455, 1041, 1182, 1575
BseCI ATCGAT 1 cut(s) 75
BseDI CCNNGG 2 cut(s) 133, 453
BseGI GGATG 7 cut(s) 157, 272, 601, 871, 1177, 1489, 1525
BseJI GATNNNNATC 1 cut(s) 1422
BseLI CCNNNNNNNGG 3 cut(s) 290, 551, 824
BseMI GCAATG 1 cut(s) 1537
BseMII CTCAG 4 cut(s) 537, 1119, 1443, 1665
BseNI ACTGG 5 cut(s) 292, 474, 779, 875, 1178
BseRI GAGGAG 1 cut(s) 1359
BsgI GTGCAG 2 cut(s) 1026, 1359
Bsh1285I CGRYCG 1 cut(s) 530
BshFI GGCC 2 cut(s) 616, 1272
BshNI GGYRCC 1 cut(s) 334
BshTI ACCGGT 2 cut(s) 416, 529
BshVI ATCGAT 1 cut(s) 75
BsiEI CGRYCG 1 cut(s) 530
BsiHKAI GWGCWC 1 cut(s) 1586
BsiHKCI CYCGRG 4 cut(s) 134, 783, 1029, 1313
BsiSI CCGG 4 cut(s) 161, 276, 417, 530
BslFI GGGAC 1 cut(s) 1571
BslI CCNNNNNNNGG 3 cut(s) 290, 551, 824
BsmAI GTCTC 3 cut(s) 911, 1316, 1669
BsmBI CGTCTC 1 cut(s) 911
BsmFI GGGAC 1 cut(s) 1571
BsmI GAATGC 2 cut(s) 1097, 1240
BsnI GGCC 2 cut(s) 616, 1272
BsoBI CYCGRG 4 cut(s) 134, 783, 1029, 1313
Bsp1286I GDGCHC 1 cut(s) 1586
Bsp1407I TGTACA 2 cut(s) 142, 381
Bsp143I GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
Bsp1720I GCTNAGC 1 cut(s) 1128
BspACI CCGC 3 cut(s) 446, 1535, 1608
BspANI GGCC 2 cut(s) 616, 1272
BspCNI CTCAG 4 cut(s) 538, 1120, 1444, 1666
BspDI ATCGAT 1 cut(s) 75
BspLI GGNNCC 2 cut(s) 336, 681
BspMAI CTGCAG 3 cut(s) 1195, 1201, 1447
BspMI ACCTGC 1 cut(s) 132
BspOI GCTAGC 1 cut(s) 1055
BspPI GGATC 4 cut(s) 536, 898, 1302, 1332
BspQI GCTCTTC 1 cut(s) 1398
BspT107I GGYRCC 1 cut(s) 334
BsrDI GCAATG 1 cut(s) 1537
BsrFI RCCGGY 3 cut(s) 160, 416, 529
BsrGI TGTACA 2 cut(s) 142, 381
BsrI ACTGG 5 cut(s) 292, 474, 779, 875, 1178
BssAI RCCGGY 3 cut(s) 160, 416, 529
BssECI CCNNGG 2 cut(s) 133, 453
BssMI GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
Bst2UI CCWGG 4 cut(s) 455, 1041, 1182, 1575
Bst4CI ACNGT 5 cut(s) 466, 1260, 1515, 1564, 1639
Bst6I CTCTTC 1 cut(s) 1398
BstAPI GCANNNNNTGC 2 cut(s) 124, 1013
BstAUI TGTACA 2 cut(s) 142, 381
BstC8I GCNNGC 5 cut(s) 281, 1053, 1270, 1306, 1434
BstDEI CTNAG 7 cut(s) 205, 546, 819, 1128, 1286, 1452, 1674
BstF5I GGATG 7 cut(s) 157, 272, 601, 871, 1177, 1489, 1525
BstHHI GCGC 1 cut(s) 460
BstKTI GATC 9 cut(s) 79, 193, 241, 439, 544, 893, 1297, 1327, 1426
BstMAI GTCTC 3 cut(s) 911, 1316, 1669
BstMBI GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
BstMCI CGRYCG 1 cut(s) 530
BstMWI GCNNNNNNNGC 6 cut(s) 124, 1013, 1124, 1199, 1442, 1604
BstNI CCWGG 4 cut(s) 455, 1041, 1182, 1575
BstNSI RCATGY 1 cut(s) 953
BstSCI CCNGG 4 cut(s) 453, 1039, 1180, 1573
BstSFI CTRYAG 4 cut(s) 729, 1191, 1197, 1443
BstV2I GAAGAC 1 cut(s) 1642
BstX2I RGATCY 2 cut(s) 238, 890
BstXI CCANNNNNNTGG 2 cut(s) 980, 1594
BstYI RGATCY 2 cut(s) 238, 890
Bsu15I ATCGAT 1 cut(s) 75
BsuI GTATCC 1 cut(s) 922
BsuRI GGCC 2 cut(s) 616, 1272
BsuTUI ATCGAT 1 cut(s) 75
BtrI CACGTC 1 cut(s) 379
BtsCI GGATG 7 cut(s) 157, 272, 601, 871, 1177, 1489, 1525
BtsI GCAGTG 2 cut(s) 513, 1188
BtsIMutI CAGTG 4 cut(s) 462, 513, 582, 1188
BveI ACCTGC 1 cut(s) 132
Cac8I GCNNGC 5 cut(s) 281, 1053, 1270, 1306, 1434
CaiI CAGNNNCTG 2 cut(s) 1013, 1451
CfoI GCGC 1 cut(s) 460
Cfr10I RCCGGY 3 cut(s) 160, 416, 529
ClaI ATCGAT 1 cut(s) 75
Csp6I GTAC 4 cut(s) 143, 382, 467, 878
CspAI ACCGGT 2 cut(s) 416, 529
CspCI CAANNNNNGTGG 2 cut(s) 549, 584
CviAII CATG 5 cut(s) 52, 331, 824, 950, 974
CviQI GTAC 4 cut(s) 143, 382, 467, 878
DdeI CTNAG 7 cut(s) 205, 546, 819, 1128, 1286, 1452, 1674
DpnI GATC 9 cut(s) 78, 192, 240, 438, 543, 892, 1296, 1326, 1425
DpnII GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
EaeI YGGCCR 1 cut(s) 1270
Eam1104I CTCTTC 1 cut(s) 1398
EarI CTCTTC 1 cut(s) 1398
Eco147I AGGCCT 1 cut(s) 616
Eco32I GATATC 1 cut(s) 970
Eco57I CTGAAG 2 cut(s) 827, 1379
Eco88I CYCGRG 4 cut(s) 134, 783, 1029, 1313
EcoRI GAATTC 1 cut(s) 14
EcoRII CCWGG 4 cut(s) 453, 1039, 1180, 1573
EcoRV GATATC 1 cut(s) 970
Esp3I CGTCTC 1 cut(s) 911
FaeI CATG 5 cut(s) 55, 334, 827, 953, 977
FalI AAGNNNNNCTT 2 cut(s) 225, 257
FaqI GGGAC 1 cut(s) 1571
FatI CATG 5 cut(s) 51, 330, 823, 949, 973
FokI GGATG 7 cut(s) 164, 259, 608, 858, 1164, 1496, 1532
FspBI CTAG 2 cut(s) 1052, 1687
GlaI GCGC 1 cut(s) 459
GsuI CTGGAG 1 cut(s) 491
HaeIII GGCC 2 cut(s) 616, 1272
HapII CCGG 4 cut(s) 161, 276, 417, 530
HhaI GCGC 1 cut(s) 460
Hin1II CATG 5 cut(s) 55, 334, 827, 953, 977
Hin6I GCGC 1 cut(s) 458
HinP1I GCGC 1 cut(s) 458
HindIII AAGCTT 1 cut(s) 753
HinfI GANTC 5 cut(s) 23, 64, 548, 701, 1044
HpaII CCGG 4 cut(s) 161, 276, 417, 530
HphI GGTGA 3 cut(s) 18, 1427, 1576
Hpy166II GTNNAC 4 cut(s) 382, 780, 815, 1546
Hpy188I TCNGA 5 cut(s) 40, 69, 376, 414, 517
Hpy188III TCNNGA 8 cut(s) 136, 182, 257, 545, 698, 761, 1165, 1313
Hpy8I GTNNAC 4 cut(s) 382, 780, 815, 1546
Hpy99I CGWCG 1 cut(s) 1603
HpyAV CCTTC 4 cut(s) 346, 627, 906, 1162
HpyCH4III ACNGT 5 cut(s) 466, 1260, 1515, 1564, 1639
HpyCH4IV ACGT 3 cut(s) 378, 1299, 1615
HpyF10VI GCNNNNNNNGC 6 cut(s) 124, 1013, 1124, 1199, 1442, 1604
HpyF3I CTNAG 7 cut(s) 205, 546, 819, 1128, 1286, 1452, 1674
HpySE526I ACGT 3 cut(s) 378, 1299, 1615
Hsp92II CATG 5 cut(s) 55, 334, 827, 953, 977
HspAI GCGC 1 cut(s) 458
Kzo9I GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
LguI GCTCTTC 1 cut(s) 1398
LmnI GCTCC 3 cut(s) 679, 1589, 1620
LweI GCATC 2 cut(s) 586, 1186
MaeI CTAG 2 cut(s) 1052, 1687
MaeII ACGT 3 cut(s) 378, 1299, 1615
MaeIII GTNAC 2 cut(s) 1399, 1438
MalI GATC 9 cut(s) 78, 192, 240, 438, 543, 892, 1296, 1326, 1425
MboI GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
MboII GAAGA 7 cut(s) 68, 248, 361, 431, 740, 1385, 1642
MflI RGATCY 2 cut(s) 238, 890
MhlI GDGCHC 1 cut(s) 1586
MlsI TGGCCA 1 cut(s) 1272
MluNI TGGCCA 1 cut(s) 1272
MlyI GAGTC 2 cut(s) 58, 557
Mox20I TGGCCA 1 cut(s) 1272
MroXI GAANNNNTTC 1 cut(s) 1467
MscI TGGCCA 1 cut(s) 1272
MseI TTAA 4 cut(s) 243, 708, 771, 1104
MslI CAYNNNNRTG 4 cut(s) 150, 329, 952, 1002
Msp20I TGGCCA 1 cut(s) 1272
MspA1I CMGCKG 3 cut(s) 1013, 1196, 1673
MspI CCGG 4 cut(s) 161, 276, 417, 530
MspR9I CCNGG 4 cut(s) 455, 1041, 1182, 1575
Mva1269I GAATGC 2 cut(s) 1097, 1240
MvaI CCWGG 4 cut(s) 455, 1041, 1182, 1575
MwoI GCNNNNNNNGC 6 cut(s) 124, 1013, 1124, 1199, 1442, 1604
NdeII GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
NheI GCTAGC 1 cut(s) 1051
NlaIII CATG 5 cut(s) 55, 334, 827, 953, 977
NlaIV GGNNCC 2 cut(s) 336, 681
NspI RCATGY 1 cut(s) 953
OliI CACNNNNGTG 1 cut(s) 952
PaeR7I CTCGAG 2 cut(s) 1029, 1313
PceI AGGCCT 1 cut(s) 616
PciI ACATGT 1 cut(s) 949
PciSI GCTCTTC 1 cut(s) 1398
PctI GAATGC 2 cut(s) 1097, 1240
PdmI GAANNNNTTC 1 cut(s) 1467
PfeI GAWTC 3 cut(s) 23, 701, 1044
PfoI TCCNGGA 1 cut(s) 1039
PinAI ACCGGT 2 cut(s) 416, 529
PleI GAGTC 2 cut(s) 58, 556
PpsI GAGTC 2 cut(s) 58, 556
PscI ACATGT 1 cut(s) 949
PsiI TTATAA 1 cut(s) 650
Psp6I CCWGG 4 cut(s) 453, 1039, 1180, 1573
PspGI CCWGG 4 cut(s) 453, 1039, 1180, 1573
PspN4I GGNNCC 2 cut(s) 336, 681
PspXI VCTCGAGB 1 cut(s) 1029
PstI CTGCAG 3 cut(s) 1195, 1201, 1447
PstNI CAGNNNCTG 2 cut(s) 1013, 1451
PsuI RGATCY 2 cut(s) 238, 890
PvuII CAGCTG 3 cut(s) 1013, 1196, 1673
RsaI GTAC 4 cut(s) 144, 383, 468, 879
RsaNI GTAC 4 cut(s) 143, 382, 467, 878
RseI CAYNNNNRTG 4 cut(s) 150, 329, 952, 1002
SapI GCTCTTC 1 cut(s) 1398
SaqAI TTAA 4 cut(s) 243, 708, 771, 1104
Sau3AI GATC 9 cut(s) 76, 190, 238, 436, 541, 890, 1294, 1324, 1423
ScaI AGTACT 1 cut(s) 879
SchI GAGTC 2 cut(s) 58, 557
ScrFI CCNGG 4 cut(s) 455, 1041, 1182, 1575
SduI GDGCHC 1 cut(s) 1586
SfaNI GCATC 2 cut(s) 586, 1186
SfcI CTRYAG 4 cut(s) 729, 1191, 1197, 1443
Sfr274I CTCGAG 2 cut(s) 1029, 1313
SlaI CTCGAG 2 cut(s) 1029, 1313
SmiMI CAYNNNNRTG 4 cut(s) 150, 329, 952, 1002
SmlI CTYRAG 3 cut(s) 257, 1029, 1313
SmoI CTYRAG 3 cut(s) 257, 1029, 1313
SseBI AGGCCT 1 cut(s) 616
SsiI CCGC 3 cut(s) 446, 1535, 1608
SspI AATATT 2 cut(s) 169, 345
SspMI CTAG 2 cut(s) 1052, 1687
StuI AGGCCT 1 cut(s) 616
StyD4I CCNGG 4 cut(s) 453, 1039, 1180, 1573
TaaI ACNGT 5 cut(s) 466, 1260, 1515, 1564, 1639
TaiI ACGT 3 cut(s) 381, 1302, 1618
TaqI TCGA 7 cut(s) 75, 624, 1030, 1064, 1092, 1314, 1365
TatI WGTACW 4 cut(s) 142, 381, 466, 877
TauI GCSGC 1 cut(s) 1610
TfiI GAWTC 3 cut(s) 23, 701, 1044
Tru1I TTAA 4 cut(s) 243, 708, 771, 1104
Tru9I TTAA 4 cut(s) 243, 708, 771, 1104
TscAI CASTG 4 cut(s) 469, 513, 582, 1195
TspDTI ATGAA 3 cut(s) 491, 975, 1090
TspGWI ACGGA 2 cut(s) 1616, 1646
TspRI CASTG 4 cut(s) 469, 513, 582, 1195
XapI RAATTY 5 cut(s) 14, 601, 793, 1019, 1680
XceI RCATGY 1 cut(s) 953
XcmI CCANNNNNNNNNTGG 1 cut(s) 882
XhoI CTCGAG 2 cut(s) 1029, 1313
XmnI GAANNNNTTC 1 cut(s) 1467
XspI CTAG 2 cut(s) 1052, 1687
ZrmI AGTACT 1 cut(s) 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.