pycom12g20470

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0015422
Physical Location & Seq
Forward (+)
21967629 .. 21969611
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g20470.1

Sequence Viewer

Length: 1983 bp
ATGAAATCCAGGTGGGTCTTTCAGCTTCAGAACCTCAGCTCCCACCACTTCCCCTCCTGCGCTTCCTCTCTAATCTCCGCCTTCAAAACCAAGCTCCACCGGAACCCCTATTCACAAACAACGGCAACATTGGTCCTCAACAATGTCGACATAAGCCTGCTCCTCTCTCTTTGTGGAAAAGATCGCAACTTTCAGCTGGGTTCTTCCCTCCACGCCTCTCTCATCAAGAACCCTGAATTCTTTCACCCTGAGAATCACGATGATCACCGCAATGCCCTTGTTGTTTGGAATTCTTTGCTGTCAATGTACTTAAAATGTGGTAAATTACGGAATGCAGTCCAACTGTTTGATCATATGCATGTGAGGGATACGGTCTCGTGGAATACGATAATATCTGGGTTTTTGAGGAATGGGGAGCTGGATAGTGGTTTTGGGTACTTTAAGCAAATGTGTGGATTGGGTTGTTATCGATTTGATAAAGCGACTTTGACTTCAATCTTAGCAGCTTTTGATGGGCCGGAGTGTTGTCACTTGAATAAGATGATGCATGGTTTGGTGGTTTTGAATGGATTTGAGCGGGAAACTGCTGTGGGGAATGCTTTGATCACATCGTATTGTAAATGTGGGTGTTTTCTGTCCGGAAGACGGGTGTTTGATGAGATGTTTGATAGGAATGTGATTACATGGACTGCGATGATTTCGGGCCTTGCACAGAATGAATACTATGTTGAAAGTTTGGAGTTGTTTTTGGAGATGCGTGGTGGAGTGGTGGATCCAAATTCTATGACTTATTTGGGATTACTCATGGCATGTTCTGGTTTGCAGGCAGTAAGTGTAGGGCGGCAAATTCATGGACTTGCATGGAAATTGGGAATTCAATCCGAGTTGTGCATTGAGAGTGCACTAATGGACATGTATTCAAAATGTGGTAGTGTGGAAGAGGCATGGAAAATTTTTGAATCCACGGAAGAACTTGATGAGATTTCTATGACTGTTATTCTGGTGGGATTTGCACAAAATGGGTTTGAGGATGAAGCAATCCATATTTTTGTGAAAATGATAAAGGCAGGAATTGACATTGACCCAAACATGGTTTCAGCAGTTCTTGGCGTATTTGGTGTTGATACTTCTTTAGGTCTAGGAATGCAGCTCCACTCTTTAATTGTCAAGAAGAATTTTGGTTCAAACTCTTTTGTCGGTAATGGGCTTATAAATATGTACTCCAAGTGTGGAGAGTTGGAGGATTCAGTCAAAGTGTTCAGTCGGATGCCTCAAAGGAACTCAATTTCTTGGAATTCCATGATTGCAGCTTTTGCCCGTCATGGAGATGGCTCAAAAGCATTACAGTTGTATGAAAAGATGAATATGGAAGGTGTACAACCAACAGATGTTACATTTCTGTCTCTACTTCATGCTTGTAGCCATGTTGGCTTCGTTGAAAGGGGCATGGAGTTCCTGAAATCCATGAACAAAGATCATGGGATGAGTCCGAGGCCAGAACACTATGCTTGTGTTGTCGACATGTTAGGTCGGGCAGGACATCTCACTGAGGCCAAAAGTTTTATCGAAAAGCTACCAGAGAATCCTGGTGTACTTGTTTGGCAAGCATTGCTTGGTGCTTGTTGCATTCACGGCGATTCAGAGATTGGCAAATATGCCGCGGACCAGTTGTTATTGGCAGCACCTGAGACACCAGCACCATATGTTTTGCTTGCCAATATATATTCTTCTGAAGGAAGGTGGAAAGAGAGAGCAAGGACTATTAAGGGGATGAAGGAGATGGGGGTGACAAAAGAAACGGGTATTAGTTGGATCGAGATTGAAAAGAAAGTTCAGAGCTTTGTTGTTGGGGATAGGATGCATCCACAAGCAGAGCCCATTTATAGGGTTTTAGGCGAACTGTTTAGACTGATGACAGATGAAGGGTATGTACCAGATGAAAGGTTTATACTGTACTATTTGGATCAAGATGAAAAGAGATAA

Protein Analysis

661

Amino Acids

73.85

Weight (kDa)

6.01

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 122 - 169 2.3e-06 PPR repeat family
PPR PF01535 125 - 155 3.7e-06 PPR repeat
PPR_2 PF13041 224 - 271 3.6e-07 PPR repeat family
PPR_2 PF13041 427 - 474 2.5e-12 PPR repeat family
PPR PF01535 429 - 459 1.7e-07 PPR repeat
E_motif PF20431 544 - 606 4.9e-15 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015422)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G05340
fragaria_vesca FvH4_6g05850
malus_domestica MD12G1219000.v1.1
prunus_persica Prupe.6G325500_v2.0.a1
pyrus_communis pycom12g20470
rosa_chinensis RchiOBHm_Chr3g0454801
rosa_laevigata RLG00000025406
rosa_multiflora Rmu_sc0001792.1_g000013 Rmu_sc0013126.1_g000006
rosa_roxburghii Rroxscaffold_6G00424720
rosa_rugosa Rorug03G0002600
rosa_samantha Rh3AG062600 Rh3BG064500 Rh3CG063400 Rh3DG064300
rosa_wichuraiana Rw3G004880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1211
AccBSI CCGCTC 1 cut(s) 577
AccI GTMKAC 2 cut(s) 147, 1518
AccII CGCG 1 cut(s) 1661
AccIII TCCGGA 1 cut(s) 638
AciI CCGC 6 cut(s) 78, 268, 577, 841, 1659, 1661
AclWI GGATC 4 cut(s) 767, 780, 1820, 1971
AcsI RAATTY 8 cut(s) 236, 289, 778, 846, 873, 951, 1174, 1294
AcuI CTGAAG 2 cut(s) 11, 1752
AfaI GTAC 7 cut(s) 308, 437, 1220, 1377, 1593, 1932, 1955
AfiI CCNNNNNNNGG 3 cut(s) 645, 1090, 1884
AflIII ACRYGT 2 cut(s) 912, 1521
AjnI CCWGG 2 cut(s) 8, 1585
AjuI GAANNNNNNNTTGG 2 cut(s) 1078, 1110
AloI GAACNNNNNNTCC 2 cut(s) 23, 55
Alw21I GWGCWC 1 cut(s) 904
Alw26I GTCTC 3 cut(s) 379, 1407, 1682
Alw44I GTGCAC 1 cut(s) 900
AlwI GGATC 4 cut(s) 767, 780, 1820, 1971
AlwNI CAGNNNCTG 1 cut(s) 1685
Aor13HI TCCGGA 1 cut(s) 638
AoxI GGCC 4 cut(s) 515, 703, 1493, 1551
ApaLI GTGCAC 1 cut(s) 900
ApeKI GCWGC 4 cut(s) 503, 1147, 1307, 1679
ApoI RAATTY 8 cut(s) 236, 289, 778, 846, 873, 951, 1174, 1294
Asp700I GAANNNNTTC 1 cut(s) 240
AspLEI GCGC 1 cut(s) 62
AspS9I GGNCC 4 cut(s) 133, 515, 703, 1663
AsuHPI GGTGA 3 cut(s) 236, 257, 1798
AvaII GGWCC 2 cut(s) 133, 1663
BaeGI GKGCMC 1 cut(s) 904
BamHI GGATCC 1 cut(s) 772
BanII GRGCYC 1 cut(s) 1878
BarI GAAGNNNNNNTAC 2 cut(s) 1914, 1946
BauI CACGAG 1 cut(s) 376
BbsI GAAGAC 1 cut(s) 649
Bbv12I GWGCWC 1 cut(s) 904
BbvCI CCTCAGC 1 cut(s) 35
BbvI GCAGC 4 cut(s) 515, 1159, 1319, 1691
BccI CCATC 3 cut(s) 506, 1322, 1774
BceAI ACGGC 2 cut(s) 138, 1648
BciT130I CCWGG 2 cut(s) 10, 1587
BciVI GTATCC 1 cut(s) 361
BclI TGATCA 3 cut(s) 262, 349, 603
BcoDI GTCTC 3 cut(s) 379, 1407, 1682
BfaI CTAG 1 cut(s) 1139
BfuI GTATCC 1 cut(s) 361
BglI GCCNNNNNGGC 1 cut(s) 1428
BisI GCNGC 6 cut(s) 504, 842, 1148, 1308, 1659, 1680
BlsI GCNGC 6 cut(s) 505, 843, 1149, 1309, 1660, 1681
Bme1390I CCNGG 2 cut(s) 10, 1587
Bme18I GGWCC 2 cut(s) 133, 1663
BmgT120I GGNCC 4 cut(s) 133, 515, 703, 1663
BmiI GGNNCC 2 cut(s) 104, 774
BmrFI CCNGG 2 cut(s) 10, 1587
BmsI GCATC 5 cut(s) 534, 744, 1257, 1848, 1870
BpiI GAAGAC 1 cut(s) 649
Bpu10I CCTNAGC 1 cut(s) 35
Bsa29I ATCGAT 1 cut(s) 469
BsaI GGTCTC 1 cut(s) 379
BsaJI CCNNGG 3 cut(s) 963, 1490, 1659
BsaWI WCCGGW 2 cut(s) 99, 638
BsaXI ACNNNNNCTCC 4 cut(s) 23, 38, 53, 68
Bsc4I CCNNNNNNNGG 3 cut(s) 645, 1090, 1884
Bse1I ACTGG 1 cut(s) 1666
Bse3DI GCAATG 2 cut(s) 277, 1607
BseAI TCCGGA 1 cut(s) 638
BseBI CCWGG 2 cut(s) 10, 1587
BseCI ATCGAT 1 cut(s) 469
BseDI CCNNGG 3 cut(s) 963, 1490, 1659
BseGI GGATG 6 cut(s) 1036, 1272, 1488, 1776, 1861, 1863
BseLI CCNNNNNNNGG 3 cut(s) 645, 1090, 1884
BseMI GCAATG 2 cut(s) 277, 1607
BseMII CTCAG 4 cut(s) 49, 240, 1539, 1677
BseNI ACTGG 1 cut(s) 1666
BseRI GAGGAG 1 cut(s) 152
BseSI GKGCMC 1 cut(s) 904
BseXI GCAGC 4 cut(s) 515, 1159, 1319, 1691
BseYI CCCAGC 1 cut(s) 196
Bsh1236I CGCG 1 cut(s) 1661
BshFI GGCC 4 cut(s) 517, 705, 1495, 1553
BshVI ATCGAT 1 cut(s) 469
BsiHKAI GWGCWC 1 cut(s) 904
BsiSI CCGG 3 cut(s) 100, 518, 639
BslI CCNNNNNNNGG 3 cut(s) 645, 1090, 1884
BsmAI GTCTC 3 cut(s) 379, 1407, 1682
BsmI GAATGC 4 cut(s) 337, 601, 1149, 1626
BsnI GGCC 4 cut(s) 517, 705, 1495, 1553
Bso31I GGTCTC 1 cut(s) 379
Bsp1286I GDGCHC 2 cut(s) 904, 1878
Bsp13I TCCGGA 1 cut(s) 638
Bsp1407I TGTACA 1 cut(s) 1375
Bsp143I GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
BspACI CCGC 6 cut(s) 78, 268, 577, 841, 1659, 1661
BspANI GGCC 4 cut(s) 517, 705, 1495, 1553
BspCNI CTCAG 4 cut(s) 48, 241, 1540, 1678
BspDI ATCGAT 1 cut(s) 469
BspEI TCCGGA 1 cut(s) 638
BspFNI CGCG 1 cut(s) 1661
BspLI GGNNCC 2 cut(s) 104, 774
BspPI GGATC 4 cut(s) 767, 780, 1820, 1971
BspTNI GGTCTC 1 cut(s) 379
BsrBI CCGCTC 1 cut(s) 577
BsrDI GCAATG 2 cut(s) 277, 1607
BsrGI TGTACA 1 cut(s) 1375
BsrI ACTGG 1 cut(s) 1666
BssECI CCNNGG 3 cut(s) 963, 1490, 1659
BssMI GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
BssSI CACGAG 1 cut(s) 376
Bst2BI CACGAG 1 cut(s) 376
Bst2UI CCWGG 2 cut(s) 10, 1587
Bst4CI ACNGT 6 cut(s) 345, 373, 994, 1347, 1902, 1953
Bst6I CTCTTC 1 cut(s) 933
BstAPI GCANNNNNTGC 2 cut(s) 1313, 1609
BstAUI TGTACA 1 cut(s) 1375
BstC8I GCNNGC 4 cut(s) 158, 825, 1605, 1713
BstDEI CTNAG 5 cut(s) 35, 249, 499, 1548, 1686
BstDSI CCRYGG 2 cut(s) 963, 1659
BstF5I GGATG 6 cut(s) 1036, 1272, 1488, 1776, 1861, 1863
BstFNI CGCG 1 cut(s) 1661
BstHHI GCGC 1 cut(s) 62
BstKTI GATC 8 cut(s) 184, 265, 352, 606, 775, 1477, 1815, 1966
BstMAI GTCTC 3 cut(s) 379, 1407, 1682
BstMBI GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
BstMWI GCNNNNNNNGC 4 cut(s) 1313, 1428, 1609, 1632
BstNI CCWGG 2 cut(s) 10, 1587
BstNSI RCATGY 4 cut(s) 362, 813, 916, 1525
BstSCI CCNGG 2 cut(s) 8, 1585
BstSLI GKGCMC 1 cut(s) 904
BstUI CGCG 1 cut(s) 1661
BstV1I GCAGC 4 cut(s) 515, 1159, 1319, 1691
BstV2I GAAGAC 1 cut(s) 649
BstX2I RGATCY 1 cut(s) 772
BstYI RGATCY 1 cut(s) 772
Bsu15I ATCGAT 1 cut(s) 469
BsuI GTATCC 1 cut(s) 361
BsuRI GGCC 4 cut(s) 517, 705, 1495, 1553
BsuTUI ATCGAT 1 cut(s) 469
BtgI CCRYGG 2 cut(s) 963, 1659
BtgZI GCGATG 1 cut(s) 707
BtsCI GGATG 6 cut(s) 1036, 1272, 1488, 1776, 1861, 1863
BtsIMutI CAGTG 1 cut(s) 1545
Cac8I GCNNGC 4 cut(s) 158, 825, 1605, 1713
CaiI CAGNNNCTG 1 cut(s) 1685
CfoI GCGC 1 cut(s) 62
Cfr13I GGNCC 4 cut(s) 133, 515, 703, 1663
Cfr42I CCGCGG 1 cut(s) 1662
ClaI ATCGAT 1 cut(s) 469
Csp6I GTAC 7 cut(s) 307, 436, 1219, 1376, 1592, 1931, 1954
CviQI GTAC 7 cut(s) 307, 436, 1219, 1376, 1592, 1931, 1954
DdeI CTNAG 5 cut(s) 35, 249, 499, 1548, 1686
DpnI GATC 8 cut(s) 183, 264, 351, 605, 774, 1476, 1814, 1965
DpnII GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
Eam1104I CTCTTC 1 cut(s) 933
EarI CTCTTC 1 cut(s) 933
EciI GGCGGA 1 cut(s) 67
Eco24I GRGCYC 1 cut(s) 1878
Eco31I GGTCTC 1 cut(s) 379
Eco47I GGWCC 2 cut(s) 133, 1663
Eco57I CTGAAG 2 cut(s) 11, 1752
EcoRI GAATTC 4 cut(s) 236, 289, 873, 1294
EcoRII CCWGG 2 cut(s) 8, 1585
EcoT22I ATGCAT 3 cut(s) 360, 549, 1863
EcoT38I GRGCYC 1 cut(s) 1878
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FauI CCCGC 1 cut(s) 570
FauNDI CATATG 2 cut(s) 354, 1702
FbaI TGATCA 3 cut(s) 262, 349, 603
FblI GTMKAC 2 cut(s) 147, 1518
Fnu4HI GCNGC 6 cut(s) 504, 842, 1148, 1308, 1659, 1680
FokI GGATG 6 cut(s) 1043, 1279, 1495, 1783, 1848, 1870
FriOI GRGCYC 1 cut(s) 1878
Fsp4HI GCNGC 6 cut(s) 504, 842, 1148, 1308, 1659, 1680
FspBI CTAG 1 cut(s) 1139
GlaI GCGC 1 cut(s) 61
GluI GCNGC 6 cut(s) 504, 842, 1148, 1308, 1659, 1680
GsaI CCCAGC 1 cut(s) 200
HaeIII GGCC 4 cut(s) 517, 705, 1495, 1553
HapII CCGG 3 cut(s) 100, 518, 639
HhaI GCGC 1 cut(s) 62
Hin6I GCGC 1 cut(s) 60
HinP1I GCGC 1 cut(s) 60
HincII GTYRAC 2 cut(s) 148, 1519
HindII GTYRAC 2 cut(s) 148, 1519
HinfI GANTC 6 cut(s) 253, 959, 1244, 1486, 1582, 1637
HpaII CCGG 3 cut(s) 100, 518, 639
HphI GGTGA 3 cut(s) 236, 257, 1798
Hpy166II GTNNAC 5 cut(s) 148, 902, 1376, 1519, 1592
Hpy188I TCNGA 7 cut(s) 30, 883, 1266, 1491, 1642, 1732, 1836
Hpy188III TCNNGA 7 cut(s) 226, 257, 639, 1168, 1456, 1816, 1967
Hpy8I GTNNAC 5 cut(s) 148, 902, 1376, 1519, 1592
HpyAV CCTTC 6 cut(s) 91, 1364, 1727, 1731, 1768, 1916
HpyCH4III ACNGT 6 cut(s) 345, 373, 994, 1347, 1902, 1953
HpyF10VI GCNNNNNNNGC 4 cut(s) 1313, 1428, 1609, 1632
HpyF3I CTNAG 5 cut(s) 35, 249, 499, 1548, 1686
HspAI GCGC 1 cut(s) 60
Kpn2I TCCGGA 1 cut(s) 638
Ksp22I TGATCA 3 cut(s) 262, 349, 603
KspI CCGCGG 1 cut(s) 1662
Kzo9I GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
LmnI GCTCC 5 cut(s) 44, 99, 165, 415, 1155
Lsp1109I GCAGC 4 cut(s) 515, 1159, 1319, 1691
LweI GCATC 5 cut(s) 534, 744, 1257, 1848, 1870
MaeI CTAG 1 cut(s) 1139
MaeIII GTNAC 3 cut(s) 527, 1390, 1786
MalI GATC 8 cut(s) 183, 264, 351, 605, 774, 1476, 1814, 1965
MbiI CCGCTC 1 cut(s) 577
MboI GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
MboII GAAGA 6 cut(s) 195, 654, 950, 980, 1183, 1719
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 2 cut(s) 904, 1878
MlyI GAGTC 1 cut(s) 1495
MmeI TCCRAC 4 cut(s) 364, 1218, 1244, 1790
Mph1103I ATGCAT 3 cut(s) 360, 549, 1863
MroI TCCGGA 1 cut(s) 638
MroXI GAANNNNTTC 1 cut(s) 240
MseI TTAA 4 cut(s) 311, 441, 1160, 1764
MslI CAYNNNNRTG 3 cut(s) 270, 357, 1326
MspA1I CMGCKG 2 cut(s) 196, 1661
MspI CCGG 3 cut(s) 100, 518, 639
MspR9I CCNGG 2 cut(s) 10, 1587
Mva1269I GAATGC 4 cut(s) 337, 601, 1149, 1626
MvaI CCWGG 2 cut(s) 10, 1587
MvnI CGCG 1 cut(s) 1661
MwoI GCNNNNNNNGC 4 cut(s) 1313, 1428, 1609, 1632
NdeI CATATG 2 cut(s) 354, 1702
NdeII GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
NlaIV GGNNCC 2 cut(s) 104, 774
NmuCI GTSAC 2 cut(s) 527, 1786
NsiI ATGCAT 3 cut(s) 360, 549, 1863
NspI RCATGY 4 cut(s) 362, 813, 916, 1525
PciI ACATGT 2 cut(s) 912, 1521
PcsI WCGNNNNNNNCGW 1 cut(s) 383
PctI GAATGC 4 cut(s) 337, 601, 1149, 1626
PdmI GAANNNNTTC 1 cut(s) 240
PfeI GAWTC 5 cut(s) 253, 959, 1244, 1582, 1637
PkrI GCNGC 6 cut(s) 505, 843, 1149, 1309, 1660, 1681
PleI GAGTC 1 cut(s) 1494
PpsI GAGTC 1 cut(s) 1494
PscI ACATGT 2 cut(s) 912, 1521
PsiI TTATAA 1 cut(s) 1211
Psp6I CCWGG 2 cut(s) 8, 1585
PspFI CCCAGC 1 cut(s) 196
PspGI CCWGG 2 cut(s) 8, 1585
PspN4I GGNNCC 2 cut(s) 104, 774
PspPI GGNCC 4 cut(s) 133, 515, 703, 1663
PstNI CAGNNNCTG 1 cut(s) 1685
PsuI RGATCY 1 cut(s) 772
PvuII CAGCTG 1 cut(s) 196
RsaI GTAC 7 cut(s) 308, 437, 1220, 1377, 1593, 1932, 1955
RsaNI GTAC 7 cut(s) 307, 436, 1219, 1376, 1592, 1931, 1954
RseI CAYNNNNRTG 3 cut(s) 270, 357, 1326
SacII CCGCGG 1 cut(s) 1662
SalI GTCGAC 2 cut(s) 146, 1517
SaqAI TTAA 4 cut(s) 311, 441, 1160, 1764
SatI GCNGC 6 cut(s) 504, 842, 1148, 1308, 1659, 1680
Sau3AI GATC 8 cut(s) 181, 262, 349, 603, 772, 1474, 1812, 1963
Sau96I GGNCC 4 cut(s) 133, 515, 703, 1663
SchI GAGTC 1 cut(s) 1495
ScrFI CCNGG 2 cut(s) 10, 1587
SduI GDGCHC 2 cut(s) 904, 1878
SfaNI GCATC 5 cut(s) 534, 744, 1257, 1848, 1870
Sfr303I CCGCGG 1 cut(s) 1662
SgrBI CCGCGG 1 cut(s) 1662
SinI GGWCC 2 cut(s) 133, 1663
SmiMI CAYNNNNRTG 3 cut(s) 270, 357, 1326
SsiI CCGC 6 cut(s) 78, 268, 577, 841, 1659, 1661
SspMI CTAG 1 cut(s) 1139
StyD4I CCNGG 2 cut(s) 8, 1585
TaaI ACNGT 6 cut(s) 345, 373, 994, 1347, 1902, 1953
TaqI TCGA 5 cut(s) 147, 469, 1518, 1566, 1815
TatI WGTACW 5 cut(s) 306, 1218, 1375, 1591, 1953
TauI GCSGC 2 cut(s) 844, 1661
TfiI GAWTC 5 cut(s) 253, 959, 1244, 1582, 1637
Tru1I TTAA 4 cut(s) 311, 441, 1160, 1764
Tru9I TTAA 4 cut(s) 311, 441, 1160, 1764
TscAI CASTG 1 cut(s) 1552
TseFI GTSAC 2 cut(s) 527, 1786
TseI GCWGC 4 cut(s) 503, 1147, 1307, 1679
Tsp45I GTSAC 2 cut(s) 527, 1786
TspGWI ACGGA 2 cut(s) 343, 980
TspRI CASTG 1 cut(s) 1552
VneI GTGCAC 1 cut(s) 900
VpaK11BI GGWCC 2 cut(s) 133, 1663
XapI RAATTY 8 cut(s) 236, 289, 778, 846, 873, 951, 1174, 1294
XceI RCATGY 4 cut(s) 362, 813, 916, 1525
XmiI GTMKAC 2 cut(s) 147, 1518
XmnI GAANNNNTTC 1 cut(s) 240
XspI CTAG 1 cut(s) 1139
Zsp2I ATGCAT 3 cut(s) 360, 549, 1863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.