Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0016959

Physical Location & Seq

Genomic Coordinates Forward (+)

24134947 .. 24137399

Gene Structure 2453 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGCAGATGTTGGGGCGCGCAGGAAGACCTCAGTTTGATTCGTATGGAGAAGGGATTATCATTACTGGCCACAATGAACTTCAATACTATCTTTCTTTGATGAACCAACAGCTTCCCATTGAAAGTCAATTCATATCCAAATTGGCTGACCAACTGAATGCTGAAATTGTTCTTGGAACTGTTCAGAATGCTAGAGAAGCTTGCAATTGGATAGGATACACTTACCTGTATGTTCGCATGTTACGTAACCCTACACTCTATGGTTTGGAAGCTGATGTTCTCTCCAGAGATATTACATTGGAGGAGAGACGAGCTGATTTGATCGATCCCGCTGCAACCATCTTGGACAAGAGCAATTTGATTAAGTACGACAGAAAAAGTGGATATTTCCAGGTTACAGACTTGGGTCGCATTGCGAGTTATTACTATATAACTCATGGAACAATATCCACATATAATGAGCATTTGAAGCCTACCATGGGGGATATTGAACTTTGTCGATTGTTTTCGCTCAGTGAAGAATTTAAGTACGTTACTGTGCGGCAGGATGAAAAGATGGAGCTAGCAAAGCTTTTGGATCGTTTTCCCATTCCGGTGAAGGAAAGCCTGGAAGAGCCCAGTGCCAAGATCAATGTCTTGCTGCAAGCATATATTTCACAGCTGAAGCTTGAGGGGCTTTCATTGACATCAGATATGGTCTACATTACTCAGAGTGCAGGGCGTCTTCTCCGAGCTCTTTTCGAGATTGTCTTGAAACGAGGATGGGCTCAACTAGCGGAAAAGGCTATGAACATGTGTAAGATGGTTAACAAGAAGATGTGGAGTGTCCAAACACCTCTTCGCCAATTCACTGGTATTGCAAATGATATTTTGATGAAGCTGGAGAAGAAGGATTTGGCCTGGGATAGGTATTATGACCTCTCGTCACAGGAGCTAGGGGAGCTTATTCGTATGCCAAAGATGGGAAGAACACTTCATAAGTTCATCCACCAGTTCCCCAAATTAAACCTTGCAGCCCATGTGCAGCCGATTACTCGCACTGTATTGAGGGTGGAGCTCACTATCACACCAGATTTCCAGTGGGAGGACAAAGTTCATGGATATGTGGAGCCATTTTGGGTAATAGTGGAGGATAATGATGGCGAGTTTGTTCTTCATCACGAATATTTTCTGCTGAAGAAGCAGTATATTGATGAGGATCATACTTTGAACTTTACAGTACCAATTTATGAGCCCCTTCCGCCTCAATACTTCATTCGTGTGGTGTCTGATAGGTGGCTTGGGTCCCAGACTGTTTTACCTGTTTCTTTCAGACACCTCATCTTACCGGAAAAGTATCCTCCACCAACAGAGTTATTGGACTTGCAACCACTTCCTGTGACTGCATTAAGGAATCCGTTATATGAAGCTTTGTATCAAGATTTCAAGCATTTCAATCCTGTCCAGACTCAGGTCTTCACTGTTTTGTATAATTCAGATGACAATGTCTTAGTTGCCGCACCAACAGGGAGTGGGAAGACCATATGTGCAGAGTTTGCTGTATTGAGGAGTCATCAGAAGCGCTCTGATAATGTCATGCGTGTTGTGTATATTGCACCTATTGAAGCTCTTGCTAAGGAACGGTACCGTGACTGGGAGAAGAAGTTTGGAAAAGGTCTCAATCTGCGAGTTGAATTATTAACAGGGGAAACGACCACAGACCTAAAACTACTTGAGAGAGGTCAGATTATCATCAGCACTCCAGAGAAATGGGATGCTTTATCCCGCCGATGGAAACAGAGAAAGCATGTTCAACAGGTTAGTCTTTTTATTGTAGATGAACTCCACTTGATTGGTGGTCAGGGTGGTCCCATCTTGGAGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000354 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009506 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0042623 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0055044 GO:0065003 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C Sec63

Protein Analysis

622

Amino Acids

71.86

Weight (kDa)

6.46

Isoelectric Point (pI)

38.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_SNRNP200	PF23445	41 - 116	1.3e-23	Winged Helix-turn-helix domain
Sec63	PF02889	133 - 436	7.8e-101	Sec63 Brl domain
DEAD	PF00270	479 - 614	5.3e-29	DEAD/DEAH box helicase
ResIII	PF04851	479 - 611	5.1e-13	Type III restriction enzyme, res subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016959)

Species	Orthologous Gene IDs
pyrus_communis	pycom04g21220 pycom12g23610
rosa_chinensis	RchiOBHm_Chr3g0448021
rosa_multiflora	Rmu_sc0005582.1_g000010 Rmu_sc0005969.1_g000017
rosa_rugosa	Rorug02G0607800
rosa_samantha	Rh3AG006900 Rh3AG007000 Rh3BG006600 Rh3BG006700 Rh3CG006800 Rh3CG006900 Rh3DG007200 Rh3DG007300

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1623
AccB1I	GGYRCC	1 cut(s)	1623
AccI	GTMKAC	1 cut(s)	699
AccII	CGCG	1 cut(s)	18
AciI	CCGC	6 cut(s)	330, 541, 776, 1241, 1497, 1765
AclWI	GGATC	3 cut(s)	320, 585, 1206
AcoI	YGGCCR	1 cut(s)	67
AcsI	RAATTY	1 cut(s)	521
AcuI	CTGAAG	2 cut(s)	683, 1196
AcyI	GRCGYC	1 cut(s)	721
AfaI	GTAC	4 cut(s)	368, 530, 1221, 1625
AfeI	AGCGCT	1 cut(s)	1562
AfiI	CCNNNNNNNGG	7 cut(s)	479, 906, 962, 1084, 1450, 1633, 1770
AflIII	ACRYGT	1 cut(s)	792
AhdI	GACNNNNNGTC	1 cut(s)	922
AjnI	CCWGG	3 cut(s)	390, 606, 899
AjuI	GAANNNNNNNTTGG	6 cut(s)	156, 188, 822, 854, 878, 910
Alw21I	GWGCWC	2 cut(s)	736, 1059
Alw26I	GTCTC	2 cut(s)	301, 1661
AlwI	GGATC	3 cut(s)	320, 585, 1206
Aor51HI	AGCGCT	1 cut(s)	1562
AoxI	GGCC	2 cut(s)	67, 897
ApeKI	GCWGC	4 cut(s)	332, 640, 1013, 1024
ApoI	RAATTY	1 cut(s)	521
Asp700I	GAANNNNTTC	2 cut(s)	168, 1167
Asp718I	GGTACC	1 cut(s)	1623
AspLEI	GCGC	3 cut(s)	18, 20, 1563
AspS9I	GGNCC	2 cut(s)	1284, 1847
AsuHPI	GGTGA	1 cut(s)	607
AsuNHI	GCTAGC	1 cut(s)	562
AvaII	GGWCC	2 cut(s)	1284, 1847
BalI	TGGCCA	1 cut(s)	69
BanI	GGYRCC	1 cut(s)	1623
BanII	GRGCYC	5 cut(s)	618, 736, 769, 1059, 1236
BbsI	GAAGAC	4 cut(s)	31, 716, 1447, 1523
Bbv12I	GWGCWC	2 cut(s)	736, 1059
BbvI	GCAGC	4 cut(s)	319, 627, 1025, 1036
BccI	CCATC	8 cut(s)	347, 550, 756, 796, 955, 1133, 1764, 1859
BcgI	CGANNNNNNTGC	2 cut(s)	314, 348
BciT130I	CCWGG	3 cut(s)	392, 608, 901
BciVI	GTATCC	2 cut(s)	209, 1347
BcoDI	GTCTC	2 cut(s)	301, 1661
BfaI	CTAG	4 cut(s)	192, 563, 773, 935
BfoI	RGCGCY	1 cut(s)	1564
BfuI	GTATCC	2 cut(s)	209, 1347
BisI	GCNGC	6 cut(s)	333, 542, 641, 1014, 1025, 1497
BlsI	GCNGC	6 cut(s)	334, 543, 642, 1015, 1026, 1498
Bme1390I	CCNGG	3 cut(s)	392, 608, 901
Bme18I	GGWCC	2 cut(s)	1284, 1847
BmeRI	GACNNNNNGTC	1 cut(s)	922
BmgT120I	GGNCC	2 cut(s)	1284, 1847
BmiI	GGNNCC	5 cut(s)	1110, 1285, 1286, 1625, 1849
BmrFI	CCNGG	3 cut(s)	392, 608, 901
BmrI	ACTGGG	2 cut(s)	612, 1642
BmsI	GCATC	1 cut(s)	1744
BmtI	GCTAGC	1 cut(s)	566
BmuI	ACTGGG	2 cut(s)	612, 1642
BoxI	GACNNNNGTC	2 cut(s)	405, 1451
BpiI	GAAGAC	4 cut(s)	31, 716, 1447, 1523
BpmI	CTGGAG	3 cut(s)	268, 902, 1725
Bpu10I	CCTNAGC	1 cut(s)	1614
BpuEI	CTTGAG	2 cut(s)	689, 1733
Bsa29I	ATCGAT	1 cut(s)	324
BsaAI	YACGTR	1 cut(s)	245
BsaBI	GATNNNNATC	2 cut(s)	1197, 1730
BsaHI	GRCGYC	1 cut(s)	721
BsaI	GGTCTC	1 cut(s)	1661
BsaJI	CCNNGG	2 cut(s)	477, 900
BsaWI	WCCGGW	2 cut(s)	592, 1327
BsaXI	ACNNNNNCTCC	2 cut(s)	1628, 1658
Bsc4I	CCNNNNNNNGG	7 cut(s)	479, 906, 962, 1084, 1450, 1633, 1770
Bse1I	ACTGG	6 cut(s)	70, 618, 856, 991, 1078, 1637
Bse3DI	GCAATG	1 cut(s)	411
Bse8I	GATNNNNATC	2 cut(s)	1197, 1730
BseBI	CCWGG	3 cut(s)	392, 608, 901
BseCI	ATCGAT	1 cut(s)	324
BseDI	CCNNGG	2 cut(s)	477, 900
BseGI	GGATG	4 cut(s)	553, 767, 984, 1759
BseJI	GATNNNNATC	2 cut(s)	1197, 1730
BseLI	CCNNNNNNNGG	7 cut(s)	479, 906, 962, 1084, 1450, 1633, 1770
BseMI	GCAATG	1 cut(s)	411
BseMII	CTCAG	4 cut(s)	44, 526, 722, 1463
BseNI	ACTGG	6 cut(s)	70, 618, 856, 991, 1078, 1637
BsePI	GCGCGC	1 cut(s)	16
BseRI	GAGGAG	2 cut(s)	317, 1561
BseXI	GCAGC	4 cut(s)	319, 627, 1025, 1036
BsgI	GTGCAG	3 cut(s)	735, 1043, 1548
Bsh1236I	CGCG	1 cut(s)	18
BshFI	GGCC	2 cut(s)	69, 899
BshNI	GGYRCC	1 cut(s)	1623
BshVI	ATCGAT	1 cut(s)	324
BsiHKAI	GWGCWC	2 cut(s)	736, 1059
BsiSI	CCGG	2 cut(s)	593, 1328
BslFI	GGGAC	2 cut(s)	1270, 1833
BslI	CCNNNNNNNGG	7 cut(s)	479, 906, 962, 1084, 1450, 1633, 1770
BsmAI	GTCTC	2 cut(s)	301, 1661
BsmBI	CGTCTC	1 cut(s)	301
BsmFI	GGGAC	2 cut(s)	1270, 1833
BsmI	GAATGC	2 cut(s)	163, 193
BsnI	GGCC	2 cut(s)	69, 899
Bso31I	GGTCTC	1 cut(s)	1661
Bsp1286I	GDGCHC	5 cut(s)	618, 736, 769, 1059, 1236
Bsp143I	GATC	5 cut(s)	321, 325, 577, 627, 1198
Bsp19I	CCATGG	1 cut(s)	477
BspACI	CCGC	6 cut(s)	330, 541, 776, 1241, 1497, 1765
BspANI	GGCC	2 cut(s)	69, 899
BspCNI	CTCAG	4 cut(s)	43, 525, 721, 1462
BspDI	ATCGAT	1 cut(s)	324
BspFNI	CGCG	1 cut(s)	18
BspLI	GGNNCC	5 cut(s)	1110, 1285, 1286, 1625, 1849
BspOI	GCTAGC	1 cut(s)	566
BspPI	GGATC	3 cut(s)	320, 585, 1206
BspQI	GCTCTTC	1 cut(s)	606
BspT107I	GGYRCC	1 cut(s)	1623
BspTNI	GGTCTC	1 cut(s)	1661
BsrDI	GCAATG	1 cut(s)	411
BsrI	ACTGG	6 cut(s)	70, 618, 856, 991, 1078, 1637
BssECI	CCNNGG	2 cut(s)	477, 900
BssHII	GCGCGC	1 cut(s)	16
BssMI	GATC	5 cut(s)	321, 325, 577, 627, 1198
BssNI	GRCGYC	1 cut(s)	721
BssT1I	CCWWGG	1 cut(s)	477
Bst2UI	CCWGG	3 cut(s)	392, 608, 901
Bst4CI	ACNGT	8 cut(s)	181, 538, 1042, 1219, 1294, 1462, 1623, 1628
Bst6I	CTCTTC	2 cut(s)	606, 843
BstACI	GRCGYC	1 cut(s)	721
BstAPI	GCANNNNNTGC	1 cut(s)	1535
BstBAI	YACGTR	1 cut(s)	245
BstC8I	GCNNGC	4 cut(s)	18, 202, 564, 645
BstDEI	CTNAG	6 cut(s)	30, 512, 708, 1449, 1489, 1614
BstDSI	CCRYGG	1 cut(s)	477
BstENI	CCTNNNNNAGG	1 cut(s)	904
BstF5I	GGATG	4 cut(s)	553, 767, 984, 1759
BstFNI	CGCG	1 cut(s)	18
BstH2I	RGCGCY	1 cut(s)	1564
BstHHI	GCGC	3 cut(s)	18, 20, 1563
BstKTI	GATC	5 cut(s)	324, 328, 580, 630, 1201
BstMAI	GTCTC	2 cut(s)	301, 1661
BstMBI	GATC	5 cut(s)	321, 325, 577, 627, 1198
BstNI	CCWGG	3 cut(s)	392, 608, 901
BstNSI	RCATGY	3 cut(s)	241, 796, 1790
BstPAI	GACNNNNGTC	2 cut(s)	405, 1451
BstSCI	CCNGG	3 cut(s)	390, 606, 899
BstSNI	TACGTA	1 cut(s)	245
BstUI	CGCG	1 cut(s)	18
BstV1I	GCAGC	4 cut(s)	319, 627, 1025, 1036
BstV2I	GAAGAC	4 cut(s)	31, 716, 1447, 1523
BstXI	CCANNNNNNTGG	3 cut(s)	851, 1749, 1832
Bsu15I	ATCGAT	1 cut(s)	324
BsuI	GTATCC	2 cut(s)	209, 1347
BsuRI	GGCC	2 cut(s)	69, 899
BsuTUI	ATCGAT	1 cut(s)	324
BtgI	CCRYGG	1 cut(s)	477
BtsCI	GGATG	4 cut(s)	553, 767, 984, 1759
BtsIMutI	CAGTG	6 cut(s)	520, 625, 849, 1038, 1085, 1458
Cac8I	GCNNGC	4 cut(s)	18, 202, 564, 645
CfoI	GCGC	3 cut(s)	18, 20, 1563
Cfr13I	GGNCC	2 cut(s)	1284, 1847
ClaI	ATCGAT	1 cut(s)	324
CseI	GACGC	1 cut(s)	710
Csp6I	GTAC	4 cut(s)	367, 529, 1220, 1624
CviAII	CATG	8 cut(s)	238, 437, 478, 793, 1019, 1097, 1576, 1787
CviQI	GTAC	4 cut(s)	367, 529, 1220, 1624
DdeI	CTNAG	6 cut(s)	30, 512, 708, 1449, 1489, 1614
DpnI	GATC	5 cut(s)	323, 327, 579, 629, 1200
DpnII	GATC	5 cut(s)	321, 325, 577, 627, 1198
DriI	GACNNNNNGTC	1 cut(s)	922
EaeI	YGGCCR	1 cut(s)	67
Eam1104I	CTCTTC	2 cut(s)	606, 843
Eam1105I	GACNNNNNGTC	1 cut(s)	922
EarI	CTCTTC	2 cut(s)	606, 843
EciI	GGCGGA	1 cut(s)	1230
Ecl136II	GAGCTC	2 cut(s)	734, 1057
Eco105I	TACGTA	1 cut(s)	245
Eco130I	CCWWGG	1 cut(s)	477
Eco24I	GRGCYC	5 cut(s)	618, 736, 769, 1059, 1236
Eco31I	GGTCTC	1 cut(s)	1661
Eco47I	GGWCC	2 cut(s)	1284, 1847
Eco47III	AGCGCT	1 cut(s)	1562
Eco53kI	GAGCTC	2 cut(s)	734, 1057
Eco57I	CTGAAG	2 cut(s)	683, 1196
EcoICRI	GAGCTC	2 cut(s)	734, 1057
EcoNI	CCTNNNNNAGG	1 cut(s)	904
EcoO109I	RGGNCCY	1 cut(s)	1284
EcoRII	CCWGG	3 cut(s)	390, 606, 899
EcoT14I	CCWWGG	1 cut(s)	477
EcoT38I	GRGCYC	5 cut(s)	618, 736, 769, 1059, 1236
ErhI	CCWWGG	1 cut(s)	477
Esp3I	CGTCTC	1 cut(s)	301
FaeI	CATG	8 cut(s)	241, 440, 481, 796, 1022, 1100, 1579, 1790
FaqI	GGGAC	2 cut(s)	1270, 1833
FatI	CATG	8 cut(s)	237, 436, 477, 792, 1018, 1096, 1575, 1786
FauI	CCCGC	2 cut(s)	337, 1772
FauNDI	CATATG	1 cut(s)	1523
FblI	GTMKAC	1 cut(s)	699
Fnu4HI	GCNGC	6 cut(s)	333, 542, 641, 1014, 1025, 1497
FokI	GGATG	4 cut(s)	560, 774, 971, 1766
FriOI	GRGCYC	5 cut(s)	618, 736, 769, 1059, 1236
Fsp4HI	GCNGC	6 cut(s)	333, 542, 641, 1014, 1025, 1497
FspBI	CTAG	4 cut(s)	192, 563, 773, 935
GlaI	GCGC	3 cut(s)	17, 19, 1562
GluI	GCNGC	6 cut(s)	333, 542, 641, 1014, 1025, 1497
GsuI	CTGGAG	3 cut(s)	268, 902, 1725
HaeII	RGCGCY	1 cut(s)	1564
HaeIII	GGCC	2 cut(s)	69, 899
HapII	CCGG	2 cut(s)	593, 1328
HgaI	GACGC	1 cut(s)	710
HhaI	GCGC	3 cut(s)	18, 20, 1563
Hin1I	GRCGYC	1 cut(s)	721
Hin1II	CATG	8 cut(s)	241, 440, 481, 796, 1022, 1100, 1579, 1790
Hin6I	GCGC	3 cut(s)	16, 18, 1561
HinP1I	GCGC	3 cut(s)	16, 18, 1561
HincII	GTYRAC	1 cut(s)	808
HindII	GTYRAC	1 cut(s)	808
HindIII	AAGCTT	4 cut(s)	198, 569, 665, 1407
HinfI	GANTC	4 cut(s)	38, 1393, 1447, 1549
HpaI	GTTAAC	1 cut(s)	808
HpaII	CCGG	2 cut(s)	593, 1328
HphI	GGTGA	1 cut(s)	607
Hpy166II	GTNNAC	2 cut(s)	700, 808
Hpy188III	TCNNGA	7 cut(s)	285, 742, 751, 1160, 1418, 1444, 1742
Hpy8I	GTNNAC	2 cut(s)	700, 808
HpyAV	CCTTC	4 cut(s)	44, 592, 883, 1247
HpyCH4III	ACNGT	8 cut(s)	181, 538, 1042, 1219, 1294, 1462, 1623, 1628
HpyCH4IV	ACGT	2 cut(s)	244, 531
HpyF3I	CTNAG	6 cut(s)	30, 512, 708, 1449, 1489, 1614
HpySE526I	ACGT	2 cut(s)	244, 531
Hsp92I	GRCGYC	1 cut(s)	721
Hsp92II	CATG	8 cut(s)	241, 440, 481, 796, 1022, 1100, 1579, 1790
HspAI	GCGC	3 cut(s)	16, 18, 1561
KflI	GGGWCCC	1 cut(s)	1284
KpnI	GGTACC	1 cut(s)	1627
KspAI	GTTAAC	1 cut(s)	808
Kzo9I	GATC	5 cut(s)	321, 325, 577, 627, 1198
LguI	GCTCTTC	1 cut(s)	606
LmnI	GCTCC	5 cut(s)	559, 931, 940, 1054, 1108
Lsp1109I	GCAGC	4 cut(s)	319, 627, 1025, 1036
LweI	GCATC	1 cut(s)	1744
MaeI	CTAG	4 cut(s)	192, 563, 773, 935
MaeII	ACGT	2 cut(s)	244, 531
MaeIII	GTNAC	7 cut(s)	240, 245, 394, 532, 924, 1378, 1628
MalI	GATC	5 cut(s)	323, 327, 579, 629, 1200
MboI	GATC	5 cut(s)	321, 325, 577, 627, 1198
MfeI	CAATTG	1 cut(s)	205
MhlI	GDGCHC	5 cut(s)	618, 736, 769, 1059, 1236
MlsI	TGGCCA	1 cut(s)	69
MluNI	TGGCCA	1 cut(s)	69
MlyI	GAGTC	2 cut(s)	1441, 1558
Mox20I	TGGCCA	1 cut(s)	69
MroXI	GAANNNNTTC	2 cut(s)	168, 1167
MscI	TGGCCA	1 cut(s)	69
MseI	TTAA	6 cut(s)	363, 525, 807, 1004, 1388, 1679
MslI	CAYNNNNRTG	3 cut(s)	593, 1101, 1259
Msp20I	TGGCCA	1 cut(s)	69
MspA1I	CMGCKG	2 cut(s)	332, 661
MspI	CCGG	2 cut(s)	593, 1328
MspR9I	CCNGG	3 cut(s)	392, 608, 901
MunI	CAATTG	1 cut(s)	205
Mva1269I	GAATGC	2 cut(s)	163, 193
MvaI	CCWGG	3 cut(s)	392, 608, 901
MvnI	CGCG	1 cut(s)	18
NcoI	CCATGG	1 cut(s)	477
NdeI	CATATG	1 cut(s)	1523
NdeII	GATC	5 cut(s)	321, 325, 577, 627, 1198
NheI	GCTAGC	1 cut(s)	562
NlaIII	CATG	8 cut(s)	241, 440, 481, 796, 1022, 1100, 1579, 1790
NlaIV	GGNNCC	5 cut(s)	1110, 1285, 1286, 1625, 1849
NmuCI	GTSAC	3 cut(s)	924, 1378, 1628
NspI	RCATGY	3 cut(s)	241, 796, 1790
PauI	GCGCGC	1 cut(s)	16
PciI	ACATGT	1 cut(s)	792
PciSI	GCTCTTC	1 cut(s)	606
PcsI	WCGNNNNNNNCGW	1 cut(s)	241
PctI	GAATGC	2 cut(s)	163, 193
PdmI	GAANNNNTTC	2 cut(s)	168, 1167
PfeI	GAWTC	2 cut(s)	38, 1393
PflFI	GACNNNGTC	1 cut(s)	1484
PkrI	GCNGC	6 cut(s)	334, 543, 642, 1015, 1026, 1498
PleI	GAGTC	2 cut(s)	1441, 1557
PpsI	GAGTC	2 cut(s)	1441, 1557
Ppu21I	YACGTR	1 cut(s)	245
PpuMI	RGGWCCY	1 cut(s)	1284
PscI	ACATGT	1 cut(s)	792
PshAI	GACNNNNGTC	2 cut(s)	405, 1451
Psp124BI	GAGCTC	2 cut(s)	736, 1059
Psp5II	RGGWCCY	1 cut(s)	1284
Psp6I	CCWGG	3 cut(s)	390, 606, 899
PspGI	CCWGG	3 cut(s)	390, 606, 899
PspN4I	GGNNCC	5 cut(s)	1110, 1285, 1286, 1625, 1849
PspPI	GGNCC	2 cut(s)	1284, 1847
PspPPI	RGGWCCY	1 cut(s)	1284
PsyI	GACNNNGTC	1 cut(s)	1484
PteI	GCGCGC	1 cut(s)	16
PvuII	CAGCTG	1 cut(s)	661
RsaI	GTAC	4 cut(s)	368, 530, 1221, 1625
RsaNI	GTAC	4 cut(s)	367, 529, 1220, 1624
RseI	CAYNNNNRTG	3 cut(s)	593, 1101, 1259
SacI	GAGCTC	2 cut(s)	736, 1059
SapI	GCTCTTC	1 cut(s)	606
SaqAI	TTAA	6 cut(s)	363, 525, 807, 1004, 1388, 1679
SatI	GCNGC	6 cut(s)	333, 542, 641, 1014, 1025, 1497
Sau3AI	GATC	5 cut(s)	321, 325, 577, 627, 1198
Sau96I	GGNCC	2 cut(s)	1284, 1847
SchI	GAGTC	2 cut(s)	1441, 1558
ScrFI	CCNGG	3 cut(s)	392, 608, 901
SduI	GDGCHC	5 cut(s)	618, 736, 769, 1059, 1236
SfaNI	GCATC	1 cut(s)	1744
SinI	GGWCC	2 cut(s)	1284, 1847
SmiMI	CAYNNNNRTG	3 cut(s)	593, 1101, 1259
SmlI	CTYRAG	2 cut(s)	668, 1712
SmoI	CTYRAG	2 cut(s)	668, 1712
SnaBI	TACGTA	1 cut(s)	245
SsiI	CCGC	6 cut(s)	330, 541, 776, 1241, 1497, 1765
SspI	AATATT	1 cut(s)	1166
SspMI	CTAG	4 cut(s)	192, 563, 773, 935
SstI	GAGCTC	2 cut(s)	736, 1059
StyD4I	CCNGG	3 cut(s)	390, 606, 899
StyI	CCWWGG	1 cut(s)	477
TaaI	ACNGT	8 cut(s)	181, 538, 1042, 1219, 1294, 1462, 1623, 1628
TaiI	ACGT	2 cut(s)	247, 534
TaqI	TCGA	3 cut(s)	324, 499, 741
TauI	GCSGC	2 cut(s)	544, 1499
TfiI	GAWTC	2 cut(s)	38, 1393
Tru1I	TTAA	6 cut(s)	363, 525, 807, 1004, 1388, 1679
Tru9I	TTAA	6 cut(s)	363, 525, 807, 1004, 1388, 1679
TscAI	CASTG	6 cut(s)	520, 625, 856, 1045, 1085, 1465
TseFI	GTSAC	3 cut(s)	924, 1378, 1628
TseI	GCWGC	4 cut(s)	332, 640, 1013, 1024
Tsp45I	GTSAC	3 cut(s)	924, 1378, 1628
TspGWI	ACGGA	1 cut(s)	1386
TspRI	CASTG	6 cut(s)	520, 625, 856, 1045, 1085, 1465
Tth111I	GACNNNGTC	1 cut(s)	1484
VpaK11BI	GGWCC	2 cut(s)	1284, 1847
XagI	CCTNNNNNAGG	1 cut(s)	904
XapI	RAATTY	1 cut(s)	521
XceI	RCATGY	3 cut(s)	241, 796, 1790
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1077, 1832
XmiI	GTMKAC	1 cut(s)	699
XmnI	GAANNNNTTC	2 cut(s)	168, 1167
XspI	CTAG	4 cut(s)	192, 563, 773, 935

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.