exocyst complex component
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom13g01010 |
| rosa_chinensis | RchiOBHm_Chr3g0463711 RchiOBHm_Chr7g0198381 |
| rosa_multiflora | Rmu_sc0003267.1_g000034 |
| rosa_samantha | Rh3DG129400 Rh7AG170900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 174 |
| AccI | GTMKAC | 1 cut(s) | 155 |
| AciI | CCGC | 2 cut(s) | 83, 98 |
| AclWI | GGATC | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 174 |
| AgsI | TTSAA | 1 cut(s) | 206 |
| Alw26I | GTCTC | 1 cut(s) | 129 |
| AlwI | GGATC | 1 cut(s) | 15 |
| AoxI | GGCC | 1 cut(s) | 139 |
| ApeKI | GCWGC | 1 cut(s) | 215 |
| AsuHPI | GGTGA | 2 cut(s) | 111, 112 |
| BauI | CACGAG | 2 cut(s) | 25, 50 |
| BbvI | GCAGC | 1 cut(s) | 202 |
| BccI | CCATC | 2 cut(s) | 51, 200 |
| BcoDI | GTCTC | 1 cut(s) | 129 |
| BisI | GCNGC | 1 cut(s) | 216 |
| BlsI | GCNGC | 1 cut(s) | 217 |
| BpmI | CTGGAG | 1 cut(s) | 200 |
| BsaJI | CCNNGG | 1 cut(s) | 210 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 174 |
| Bse1I | ACTGG | 1 cut(s) | 179 |
| BseDI | CCNNGG | 1 cut(s) | 210 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 174 |
| BseNI | ACTGG | 1 cut(s) | 179 |
| BseXI | GCAGC | 1 cut(s) | 202 |
| BshFI | GGCC | 1 cut(s) | 141 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 174 |
| BsmAI | GTCTC | 1 cut(s) | 129 |
| BsmBI | CGTCTC | 1 cut(s) | 129 |
| BsnI | GGCC | 1 cut(s) | 141 |
| Bsp143I | GATC | 3 cut(s) | 20, 162, 183 |
| Bsp19I | CCATGG | 1 cut(s) | 210 |
| BspACI | CCGC | 2 cut(s) | 83, 98 |
| BspANI | GGCC | 1 cut(s) | 141 |
| BspPI | GGATC | 1 cut(s) | 15 |
| BspQI | GCTCTTC | 1 cut(s) | 98 |
| BsrI | ACTGG | 1 cut(s) | 179 |
| BssECI | CCNNGG | 1 cut(s) | 210 |
| BssMI | GATC | 3 cut(s) | 20, 162, 183 |
| BssNAI | GTATAC | 1 cut(s) | 156 |
| BssSI | CACGAG | 2 cut(s) | 25, 50 |
| BssT1I | CCWWGG | 1 cut(s) | 210 |
| Bst1107I | GTATAC | 1 cut(s) | 156 |
| Bst2BI | CACGAG | 2 cut(s) | 25, 50 |
| Bst4CI | ACNGT | 2 cut(s) | 123, 160 |
| Bst6I | CTCTTC | 1 cut(s) | 98 |
| BstDEI | CTNAG | 1 cut(s) | 228 |
| BstDSI | CCRYGG | 1 cut(s) | 210 |
| BstKTI | GATC | 3 cut(s) | 23, 165, 186 |
| BstMAI | GTCTC | 1 cut(s) | 129 |
| BstMBI | GATC | 3 cut(s) | 20, 162, 183 |
| BstV1I | GCAGC | 1 cut(s) | 202 |
| BstZ17I | GTATAC | 1 cut(s) | 156 |
| BsuRI | GGCC | 1 cut(s) | 141 |
| BtgI | CCRYGG | 1 cut(s) | 210 |
| CviAII | CATG | 2 cut(s) | 32, 211 |
| CviJI | RGCY | 4 cut(s) | 141, 178, 201, 215 |
| CviKI_1 | RGCY | 4 cut(s) | 141, 178, 201, 215 |
| DdeI | CTNAG | 1 cut(s) | 228 |
| DpnI | GATC | 3 cut(s) | 22, 164, 185 |
| DpnII | GATC | 3 cut(s) | 20, 162, 183 |
| Eam1104I | CTCTTC | 1 cut(s) | 98 |
| EarI | CTCTTC | 1 cut(s) | 98 |
| Eco130I | CCWWGG | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 210 |
| ErhI | CCWWGG | 1 cut(s) | 210 |
| Esp3I | CGTCTC | 1 cut(s) | 129 |
| FaeI | CATG | 2 cut(s) | 35, 214 |
| FaiI | YATR | 3 cut(s) | 33, 156, 212 |
| FatI | CATG | 2 cut(s) | 31, 210 |
| FauI | CCCGC | 1 cut(s) | 90 |
| FblI | GTMKAC | 1 cut(s) | 155 |
| Fnu4HI | GCNGC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 1 cut(s) | 216 |
| GluI | GCNGC | 1 cut(s) | 216 |
| GsuI | CTGGAG | 1 cut(s) | 200 |
| HaeIII | GGCC | 1 cut(s) | 141 |
| Hin1II | CATG | 2 cut(s) | 35, 214 |
| HinfI | GANTC | 3 cut(s) | 28, 188, 206 |
| HphI | GGTGA | 2 cut(s) | 111, 112 |
| Hpy166II | GTNNAC | 1 cut(s) | 156 |
| Hpy188III | TCNNGA | 2 cut(s) | 52, 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 156 |
| HpyCH4III | ACNGT | 2 cut(s) | 123, 160 |
| HpyF3I | CTNAG | 1 cut(s) | 228 |
| Hsp92II | CATG | 2 cut(s) | 35, 214 |
| Kzo9I | GATC | 3 cut(s) | 20, 162, 183 |
| LguI | GCTCTTC | 1 cut(s) | 98 |
| LpnPI | CCDG | 3 cut(s) | 77, 160, 164 |
| Lsp1109I | GCAGC | 1 cut(s) | 202 |
| MalI | GATC | 3 cut(s) | 22, 164, 185 |
| MboI | GATC | 3 cut(s) | 20, 162, 183 |
| MboII | GAAGA | 4 cut(s) | 115, 124, 127, 187 |
| MlyI | GAGTC | 1 cut(s) | 37 |
| MnlI | CCTC | 3 cut(s) | 27, 152, 230 |
| NcoI | CCATGG | 1 cut(s) | 210 |
| NdeII | GATC | 3 cut(s) | 20, 162, 183 |
| NlaIII | CATG | 2 cut(s) | 35, 214 |
| PciSI | GCTCTTC | 1 cut(s) | 98 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 144 |
| PfeI | GAWTC | 2 cut(s) | 188, 206 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 174 |
| PkrI | GCNGC | 1 cut(s) | 217 |
| PleI | GAGTC | 1 cut(s) | 36 |
| PpsI | GAGTC | 1 cut(s) | 36 |
| SapI | GCTCTTC | 1 cut(s) | 98 |
| SatI | GCNGC | 1 cut(s) | 216 |
| Sau3AI | GATC | 3 cut(s) | 20, 162, 183 |
| SchI | GAGTC | 1 cut(s) | 37 |
| SetI | ASST | 1 cut(s) | 19 |
| SsiI | CCGC | 2 cut(s) | 83, 98 |
| StyI | CCWWGG | 1 cut(s) | 210 |
| TaaI | ACNGT | 2 cut(s) | 123, 160 |
| TaqI | TCGA | 5 cut(s) | 19, 75, 129, 147, 186 |
| TfiI | GAWTC | 2 cut(s) | 188, 206 |
| TseI | GCWGC | 1 cut(s) | 215 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 174 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 175 |
| XmiI | GTMKAC | 1 cut(s) | 155 |