No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom13g01010 |
| rosa_chinensis | RchiOBHm_Chr3g0463711 RchiOBHm_Chr7g0198381 |
| rosa_multiflora | Rmu_sc0003267.1_g000034 |
| rosa_samantha | Rh3DG129400 Rh7AG170900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 139 |
| AcoI | YGGCCR | 3 cut(s) | 70, 102, 243 |
| AfaI | GTAC | 1 cut(s) | 222 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 167, 241, 296 |
| Alw26I | GTCTC | 1 cut(s) | 27 |
| AoxI | GGCC | 5 cut(s) | 70, 102, 136, 226, 243 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 200, 232 |
| AspS9I | GGNCC | 1 cut(s) | 226 |
| AsuC2I | CCSGG | 1 cut(s) | 225 |
| AsuII | TTCGAA | 1 cut(s) | 271 |
| BceAI | ACGGC | 2 cut(s) | 57, 89 |
| BcnI | CCSGG | 1 cut(s) | 225 |
| BcoDI | GTCTC | 1 cut(s) | 27 |
| BfaI | CTAG | 2 cut(s) | 194, 206 |
| BisI | GCNGC | 1 cut(s) | 139 |
| BlsI | GCNGC | 1 cut(s) | 140 |
| Bme1390I | CCNGG | 1 cut(s) | 225 |
| BmgT120I | GGNCC | 1 cut(s) | 226 |
| BmrFI | CCNGG | 1 cut(s) | 225 |
| Bpu14I | TTCGAA | 1 cut(s) | 271 |
| BpuMI | CCSGG | 1 cut(s) | 225 |
| BsaJI | CCNNGG | 1 cut(s) | 280 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 167, 241, 296 |
| BseDI | CCNNGG | 1 cut(s) | 280 |
| BseGI | GGATG | 1 cut(s) | 205 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 167, 241, 296 |
| BshFI | GGCC | 5 cut(s) | 72, 104, 138, 228, 245 |
| BsiSI | CCGG | 2 cut(s) | 224, 246 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 167, 241, 296 |
| BsmAI | GTCTC | 1 cut(s) | 27 |
| BsnI | GGCC | 5 cut(s) | 72, 104, 138, 228, 245 |
| Bsp119I | TTCGAA | 1 cut(s) | 271 |
| Bsp143I | GATC | 1 cut(s) | 291 |
| BspACI | CCGC | 1 cut(s) | 139 |
| BspANI | GGCC | 5 cut(s) | 72, 104, 138, 228, 245 |
| BspT104I | TTCGAA | 1 cut(s) | 271 |
| BssECI | CCNNGG | 1 cut(s) | 280 |
| BssMI | GATC | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 1 cut(s) | 151 |
| BstBI | TTCGAA | 1 cut(s) | 271 |
| BstF5I | GGATG | 1 cut(s) | 205 |
| BstKTI | GATC | 1 cut(s) | 294 |
| BstMAI | GTCTC | 1 cut(s) | 27 |
| BstMBI | GATC | 1 cut(s) | 291 |
| BstSCI | CCNGG | 1 cut(s) | 223 |
| BsuRI | GGCC | 5 cut(s) | 72, 104, 138, 228, 245 |
| BtsCI | GGATG | 1 cut(s) | 205 |
| BtsIMutI | CAGTG | 1 cut(s) | 147 |
| Cfr13I | GGNCC | 1 cut(s) | 226 |
| Csp6I | GTAC | 1 cut(s) | 221 |
| CviAII | CATG | 1 cut(s) | 143 |
| CviJI | RGCY | 6 cut(s) | 72, 104, 138, 157, 228, 245 |
| CviKI_1 | RGCY | 6 cut(s) | 72, 104, 138, 157, 228, 245 |
| CviQI | GTAC | 1 cut(s) | 221 |
| DpnI | GATC | 1 cut(s) | 293 |
| DpnII | GATC | 1 cut(s) | 291 |
| EaeI | YGGCCR | 3 cut(s) | 70, 102, 243 |
| FaeI | CATG | 1 cut(s) | 146 |
| FaiI | YATR | 5 cut(s) | 8, 118, 144, 231, 261 |
| FatI | CATG | 1 cut(s) | 142 |
| Fnu4HI | GCNGC | 1 cut(s) | 139 |
| FokI | GGATG | 1 cut(s) | 212 |
| Fsp4HI | GCNGC | 1 cut(s) | 139 |
| FspBI | CTAG | 2 cut(s) | 194, 206 |
| GluI | GCNGC | 1 cut(s) | 139 |
| HaeIII | GGCC | 5 cut(s) | 72, 104, 138, 228, 245 |
| HapII | CCGG | 2 cut(s) | 224, 246 |
| Hin1II | CATG | 1 cut(s) | 146 |
| HinfI | GANTC | 2 cut(s) | 209, 273 |
| HpaII | CCGG | 2 cut(s) | 224, 246 |
| Hpy188I | TCNGA | 2 cut(s) | 236, 291 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 213 |
| HpyCH4III | ACNGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 1 cut(s) | 181 |
| Hsp92II | CATG | 1 cut(s) | 146 |
| Kzo9I | GATC | 1 cut(s) | 291 |
| LpnPI | CCDG | 3 cut(s) | 175, 237, 259 |
| MaeI | CTAG | 2 cut(s) | 194, 206 |
| MalI | GATC | 1 cut(s) | 293 |
| MboI | GATC | 1 cut(s) | 291 |
| MluCI | AATT | 2 cut(s) | 38, 165 |
| MlyI | GAGTC | 1 cut(s) | 203 |
| MnlI | CCTC | 3 cut(s) | 128, 190, 290 |
| MseI | TTAA | 1 cut(s) | 304 |
| MspI | CCGG | 2 cut(s) | 224, 246 |
| MspR9I | CCNGG | 1 cut(s) | 225 |
| NciI | CCSGG | 1 cut(s) | 225 |
| NdeII | GATC | 1 cut(s) | 291 |
| NlaIII | CATG | 1 cut(s) | 146 |
| NmeAIII | GCCGAG | 1 cut(s) | 261 |
| NspV | TTCGAA | 1 cut(s) | 271 |
| PfeI | GAWTC | 1 cut(s) | 273 |
| PkrI | GCNGC | 1 cut(s) | 140 |
| PleI | GAGTC | 1 cut(s) | 203 |
| PpsI | GAGTC | 1 cut(s) | 203 |
| PspPI | GGNCC | 1 cut(s) | 226 |
| RsaI | GTAC | 1 cut(s) | 222 |
| RsaNI | GTAC | 1 cut(s) | 221 |
| SaqAI | TTAA | 1 cut(s) | 304 |
| SatI | GCNGC | 1 cut(s) | 139 |
| Sau3AI | GATC | 1 cut(s) | 291 |
| Sau96I | GGNCC | 1 cut(s) | 226 |
| SchI | GAGTC | 1 cut(s) | 203 |
| ScrFI | CCNGG | 1 cut(s) | 225 |
| SetI | ASST | 1 cut(s) | 282 |
| SfuI | TTCGAA | 1 cut(s) | 271 |
| Sse9I | AATT | 2 cut(s) | 38, 165 |
| SsiI | CCGC | 1 cut(s) | 139 |
| SspMI | CTAG | 2 cut(s) | 194, 206 |
| StyD4I | CCNGG | 1 cut(s) | 223 |
| TaaI | ACNGT | 1 cut(s) | 151 |
| TaqI | TCGA | 2 cut(s) | 214, 271 |
| TasI | AATT | 2 cut(s) | 38, 165 |
| TauI | GCSGC | 1 cut(s) | 141 |
| TfiI | GAWTC | 1 cut(s) | 273 |
| Tru1I | TTAA | 1 cut(s) | 304 |
| Tru9I | TTAA | 1 cut(s) | 304 |
| TscAI | CASTG | 1 cut(s) | 154 |
| TspDTI | ATGAA | 2 cut(s) | 21, 105 |
| TspRI | CASTG | 1 cut(s) | 154 |
| XbaI | TCTAGA | 1 cut(s) | 205 |
| XspI | CTAG | 2 cut(s) | 194, 206 |